Query 015523
Match_columns 405
No_of_seqs 256 out of 2357
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 14:06:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015523.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015523hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uk7_A Class I glutamine amido 100.0 1.4E-61 4.8E-66 474.3 31.3 341 15-388 10-393 (396)
2 4e08_A DJ-1 beta; flavodoxin-l 100.0 1.1E-38 3.7E-43 280.6 21.9 184 219-403 4-190 (190)
3 4e08_A DJ-1 beta; flavodoxin-l 100.0 1.5E-38 5.2E-43 279.6 20.9 185 16-201 4-190 (190)
4 3mgk_A Intracellular protease/ 100.0 5.6E-38 1.9E-42 280.0 20.1 183 219-405 3-192 (211)
5 2rk3_A Protein DJ-1; parkinson 100.0 1.4E-37 4.9E-42 275.0 20.6 185 219-403 2-190 (197)
6 3noq_A THIJ/PFPI family protei 100.0 2.3E-37 7.8E-42 279.6 22.0 182 219-404 4-188 (231)
7 3gra_A Transcriptional regulat 100.0 3.4E-38 1.2E-42 279.6 16.3 181 219-404 4-194 (202)
8 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 1.2E-37 4E-42 277.6 19.7 190 14-203 6-197 (208)
9 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 9E-38 3.1E-42 278.4 19.0 183 218-401 7-193 (208)
10 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 1.1E-37 3.9E-42 277.2 19.4 186 220-405 2-192 (205)
11 3ewn_A THIJ/PFPI family protei 100.0 4.7E-37 1.6E-41 280.3 22.2 184 219-404 22-208 (253)
12 4gdh_A DJ-1, uncharacterized p 100.0 3.3E-37 1.1E-41 271.4 19.8 182 219-401 3-194 (194)
13 3mgk_A Intracellular protease/ 100.0 1.8E-37 6.3E-42 276.6 17.3 190 16-211 3-199 (211)
14 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 4.7E-37 1.6E-41 273.2 19.5 188 17-204 2-193 (205)
15 3ewn_A THIJ/PFPI family protei 100.0 4.2E-37 1.4E-41 280.7 19.5 184 17-203 23-209 (253)
16 3noq_A THIJ/PFPI family protei 100.0 6.7E-37 2.3E-41 276.5 20.4 183 16-203 4-189 (231)
17 3er6_A Putative transcriptiona 100.0 3E-37 1E-41 275.0 16.9 182 219-403 7-201 (209)
18 3gra_A Transcriptional regulat 100.0 1.1E-37 3.9E-42 276.2 13.9 185 15-205 3-197 (202)
19 4hcj_A THIJ/PFPI domain protei 100.0 6E-37 2.1E-41 264.6 17.9 166 220-387 8-175 (177)
20 2rk3_A Protein DJ-1; parkinson 100.0 8E-37 2.7E-41 270.2 18.3 187 16-203 2-192 (197)
21 4gdh_A DJ-1, uncharacterized p 100.0 8.4E-37 2.9E-41 268.8 16.3 183 15-199 2-194 (194)
22 3er6_A Putative transcriptiona 100.0 1.3E-36 4.4E-41 270.9 15.8 186 14-203 5-203 (209)
23 4hcj_A THIJ/PFPI domain protei 100.0 1.8E-36 6E-41 261.7 15.1 167 16-185 7-175 (177)
24 3bhn_A THIJ/PFPI domain protei 100.0 1.5E-35 5.3E-40 267.5 18.0 180 219-404 19-203 (236)
25 3efe_A THIJ/PFPI family protei 100.0 1.3E-35 4.5E-40 265.1 15.4 180 220-404 5-198 (212)
26 3l18_A Intracellular protease 100.0 6.7E-35 2.3E-39 251.3 17.4 164 220-385 2-167 (168)
27 3efe_A THIJ/PFPI family protei 100.0 4.7E-35 1.6E-39 261.5 14.2 182 16-203 4-199 (212)
28 3bhn_A THIJ/PFPI domain protei 100.0 9.3E-35 3.2E-39 262.4 13.7 183 14-203 17-204 (236)
29 2vrn_A Protease I, DR1199; cys 100.0 1.4E-34 4.7E-39 254.5 14.5 173 219-392 8-188 (190)
30 3l18_A Intracellular protease 100.0 1.4E-34 4.7E-39 249.4 13.7 165 16-183 1-167 (168)
31 2vrn_A Protease I, DR1199; cys 100.0 2.1E-34 7.1E-39 253.3 13.9 174 15-190 7-188 (190)
32 3fse_A Two-domain protein cont 100.0 3.1E-34 1.1E-38 272.9 14.7 178 219-398 9-190 (365)
33 2fex_A Conserved hypothetical 100.0 5.6E-34 1.9E-38 250.1 15.1 177 220-402 1-184 (188)
34 1oi4_A Hypothetical protein YH 100.0 3.6E-33 1.2E-37 245.7 19.2 170 215-386 18-192 (193)
35 3f5d_A Protein YDEA; unknow pr 100.0 8.5E-34 2.9E-38 251.5 13.4 175 220-402 3-183 (206)
36 3fse_A Two-domain protein cont 100.0 4.2E-34 1.4E-38 272.0 12.1 180 14-196 7-190 (365)
37 2fex_A Conserved hypothetical 100.0 5.4E-33 1.9E-37 243.8 15.8 176 17-199 1-183 (188)
38 3f5d_A Protein YDEA; unknow pr 100.0 8.4E-33 2.9E-37 245.1 16.1 179 16-203 2-186 (206)
39 1oi4_A Hypothetical protein YH 100.0 1.1E-32 3.8E-37 242.6 15.6 167 15-184 21-192 (193)
40 3cne_A Putative protease I; st 100.0 4.3E-32 1.5E-36 235.3 15.5 160 220-385 2-174 (175)
41 3cne_A Putative protease I; st 100.0 3.3E-31 1.1E-35 229.8 15.0 160 17-183 2-174 (175)
42 1u9c_A APC35852; structural ge 100.0 1.1E-31 3.8E-36 242.1 12.5 169 219-388 4-223 (224)
43 1u9c_A APC35852; structural ge 100.0 5.2E-31 1.8E-35 237.7 12.3 169 17-187 5-224 (224)
44 3kkl_A Probable chaperone prot 100.0 6.7E-30 2.3E-34 231.8 13.6 171 220-390 3-240 (244)
45 1rw7_A YDR533CP; alpha-beta sa 100.0 6.2E-30 2.1E-34 233.1 11.9 168 220-388 3-238 (243)
46 3uk7_A Class I glutamine amido 100.0 7.4E-29 2.5E-33 242.3 17.9 170 219-389 11-201 (396)
47 3kkl_A Probable chaperone prot 100.0 3.6E-29 1.2E-33 227.0 13.4 171 17-188 3-240 (244)
48 1n57_A Chaperone HSP31, protei 100.0 1.7E-29 5.8E-34 235.4 11.2 170 220-390 48-282 (291)
49 3n7t_A Macrophage binding prot 100.0 5.7E-29 1.9E-33 225.7 13.0 168 220-388 9-244 (247)
50 1rw7_A YDR533CP; alpha-beta sa 100.0 5.4E-29 1.8E-33 226.9 11.0 167 17-185 3-237 (243)
51 1n57_A Chaperone HSP31, protei 100.0 2.7E-28 9.2E-33 227.3 12.7 170 17-188 48-282 (291)
52 3n7t_A Macrophage binding prot 100.0 2.6E-28 8.9E-33 221.4 11.8 169 17-186 9-244 (247)
53 1vhq_A Enhancing lycopene bios 99.9 1.3E-28 4.4E-33 222.9 8.5 171 219-396 5-219 (232)
54 1vhq_A Enhancing lycopene bios 99.9 2.4E-28 8.1E-33 221.1 6.6 179 15-203 4-225 (232)
55 3l3b_A ES1 family protein; ssg 99.9 7.6E-28 2.6E-32 217.7 9.0 155 219-373 22-217 (242)
56 3l3b_A ES1 family protein; ssg 99.9 3.2E-27 1.1E-31 213.6 6.6 168 16-188 22-230 (242)
57 1sy7_A Catalase 1; heme oxidat 99.9 7.8E-22 2.7E-26 201.5 17.5 187 184-386 488-697 (715)
58 1sy7_A Catalase 1; heme oxidat 99.8 1.8E-20 6.1E-25 191.5 15.3 154 15-185 532-698 (715)
59 3ttv_A Catalase HPII; heme ori 99.8 1.8E-18 6.3E-23 174.8 13.5 148 184-334 550-711 (753)
60 3ttv_A Catalase HPII; heme ori 99.7 8.2E-18 2.8E-22 170.1 14.2 114 15-132 598-711 (753)
61 2iuf_A Catalase; oxidoreductas 99.7 8.2E-16 2.8E-20 155.2 14.3 142 184-335 485-652 (688)
62 2iuf_A Catalase; oxidoreductas 99.6 2.9E-15 9.8E-20 151.3 12.6 130 15-182 527-674 (688)
63 3ej6_A Catalase-3; heme, hydro 99.6 8.2E-15 2.8E-19 147.5 15.1 141 184-334 493-649 (688)
64 3ej6_A Catalase-3; heme, hydro 99.5 2.2E-14 7.4E-19 144.4 12.3 107 15-132 535-649 (688)
65 3d54_D Phosphoribosylformylgly 99.1 1.4E-10 4.6E-15 102.9 7.5 95 219-337 1-101 (213)
66 3d54_D Phosphoribosylformylgly 98.9 2.1E-09 7E-14 95.2 8.1 94 17-135 2-101 (213)
67 2nv0_A Glutamine amidotransfer 98.3 1.1E-06 3.8E-11 76.5 6.6 87 220-331 1-88 (196)
68 1q7r_A Predicted amidotransfer 98.2 1.6E-06 5.3E-11 77.0 6.3 87 220-331 23-110 (219)
69 2iss_D Glutamine amidotransfer 98.1 3.2E-06 1.1E-10 74.2 6.4 88 219-331 19-107 (208)
70 3l7n_A Putative uncharacterize 98.1 1.4E-05 4.9E-10 71.5 10.7 94 221-331 1-100 (236)
71 3m3p_A Glutamine amido transfe 98.1 8.8E-06 3E-10 73.4 9.0 95 220-331 3-98 (250)
72 1q7r_A Predicted amidotransfer 98.1 5.3E-06 1.8E-10 73.5 6.7 88 16-129 22-110 (219)
73 2nv0_A Glutamine amidotransfer 98.0 8.3E-06 2.8E-10 70.8 7.1 86 17-128 1-87 (196)
74 3ugj_A Phosphoribosylformylgly 98.0 7.3E-05 2.5E-09 81.5 15.5 101 219-337 1046-1159(1303)
75 1ka9_H Imidazole glycerol phos 98.0 1.2E-05 4.2E-10 70.0 7.7 88 220-331 2-91 (200)
76 2ywd_A Glutamine amidotransfer 98.0 8.5E-06 2.9E-10 70.4 6.4 87 220-331 2-90 (191)
77 2iss_D Glutamine amidotransfer 98.0 9.3E-06 3.2E-10 71.3 6.4 90 14-129 17-107 (208)
78 3l7n_A Putative uncharacterize 97.9 6.3E-05 2.2E-09 67.3 10.5 94 18-129 1-100 (236)
79 1ka9_H Imidazole glycerol phos 97.9 3.3E-05 1.1E-09 67.3 7.8 88 17-129 2-91 (200)
80 1wl8_A GMP synthase [glutamine 97.8 3.8E-05 1.3E-09 66.2 7.5 86 223-331 3-88 (189)
81 2ywd_A Glutamine amidotransfer 97.7 3.5E-05 1.2E-09 66.5 6.1 86 18-129 3-90 (191)
82 3ugj_A Phosphoribosylformylgly 97.7 8E-05 2.7E-09 81.2 10.0 101 17-136 1047-1160(1303)
83 1qdl_B Protein (anthranilate s 97.7 5.3E-05 1.8E-09 65.6 6.7 90 223-331 4-93 (195)
84 3m3p_A Glutamine amido transfe 97.7 0.0001 3.5E-09 66.4 8.5 95 17-129 3-98 (250)
85 2abw_A PDX2 protein, glutamina 97.7 4.7E-05 1.6E-09 67.7 6.3 87 220-331 3-96 (227)
86 1o1y_A Conserved hypothetical 97.6 0.0001 3.4E-09 66.1 6.4 94 221-331 13-109 (239)
87 2abw_A PDX2 protein, glutamina 97.5 7.7E-05 2.6E-09 66.3 5.3 87 17-129 3-96 (227)
88 2ywj_A Glutamine amidotransfer 97.5 0.00018 6.3E-09 61.6 6.8 83 221-331 1-84 (186)
89 1gpw_B Amidotransferase HISH; 97.5 0.00021 7.3E-09 62.1 7.0 87 221-332 1-94 (201)
90 2a9v_A GMP synthase; structura 97.3 0.00039 1.3E-08 61.0 7.3 90 218-331 11-101 (212)
91 1wl8_A GMP synthase [glutamine 97.3 0.00037 1.3E-08 59.9 6.6 86 20-129 3-88 (189)
92 1gpw_B Amidotransferase HISH; 97.2 0.0009 3.1E-08 58.0 7.6 87 18-130 1-94 (201)
93 1o1y_A Conserved hypothetical 97.1 0.00061 2.1E-08 60.9 6.4 94 20-129 13-109 (239)
94 1qdl_B Protein (anthranilate s 97.1 0.00046 1.6E-08 59.7 5.4 90 20-129 4-93 (195)
95 1a9x_B Carbamoyl phosphate syn 97.1 0.0014 4.7E-08 62.4 8.6 87 221-331 191-277 (379)
96 2ywj_A Glutamine amidotransfer 97.1 0.00086 2.9E-08 57.4 6.5 83 18-129 1-84 (186)
97 4gud_A Imidazole glycerol phos 97.1 0.00025 8.7E-09 62.1 3.0 87 220-331 2-88 (211)
98 4gud_A Imidazole glycerol phos 97.0 0.00029 9.8E-09 61.7 2.4 86 18-129 3-88 (211)
99 3l4e_A Uncharacterized peptida 96.9 0.00049 1.7E-08 60.0 3.2 98 220-330 27-128 (206)
100 1fy2_A Aspartyl dipeptidase; s 96.8 0.00065 2.2E-08 60.3 3.8 97 219-332 30-130 (229)
101 2vpi_A GMP synthase; guanine m 96.7 0.00044 1.5E-08 60.9 1.5 88 220-331 24-112 (218)
102 2w7t_A CTP synthetase, putativ 96.6 0.0035 1.2E-07 57.1 6.9 96 221-330 9-111 (273)
103 2h2w_A Homoserine O-succinyltr 96.6 0.011 3.8E-07 54.5 10.0 112 219-332 46-165 (312)
104 3l4e_A Uncharacterized peptida 96.6 0.0021 7.1E-08 56.0 4.9 100 15-128 25-128 (206)
105 3fij_A LIN1909 protein; 11172J 96.5 0.0056 1.9E-07 55.1 7.8 78 239-331 33-124 (254)
106 1a9x_B Carbamoyl phosphate syn 96.5 0.0049 1.7E-07 58.6 7.6 88 17-129 190-277 (379)
107 2vdj_A Homoserine O-succinyltr 96.5 0.0043 1.5E-07 57.1 6.8 112 219-332 34-153 (301)
108 1jvn_A Glutamine, bifunctional 96.4 0.0034 1.2E-07 63.2 5.9 88 220-331 4-95 (555)
109 2a9v_A GMP synthase; structura 96.3 0.0051 1.7E-07 53.8 5.7 90 15-129 11-101 (212)
110 3uow_A GMP synthetase; structu 96.3 0.015 5.3E-07 58.3 9.8 93 220-331 7-99 (556)
111 2vpi_A GMP synthase; guanine m 96.2 0.0013 4.5E-08 57.9 1.7 88 17-129 24-112 (218)
112 2h2w_A Homoserine O-succinyltr 96.2 0.022 7.4E-07 52.6 9.5 113 14-130 44-165 (312)
113 2v4u_A CTP synthase 2; pyrimid 96.1 0.005 1.7E-07 56.6 4.9 102 220-330 25-134 (289)
114 1fy2_A Aspartyl dipeptidase; s 96.1 0.0053 1.8E-07 54.4 4.8 96 17-130 31-130 (229)
115 2vdj_A Homoserine O-succinyltr 96.0 0.016 5.6E-07 53.2 8.1 115 14-130 32-153 (301)
116 1jvn_A Glutamine, bifunctional 95.9 0.0058 2E-07 61.4 4.9 90 17-129 4-95 (555)
117 3nva_A CTP synthase; rossman f 95.9 0.033 1.1E-06 54.7 10.0 155 157-331 231-395 (535)
118 3fij_A LIN1909 protein; 11172J 95.6 0.032 1.1E-06 50.1 7.8 78 35-129 32-124 (254)
119 3uow_A GMP synthetase; structu 95.6 0.029 9.9E-07 56.3 8.3 93 16-129 6-99 (556)
120 3r75_A Anthranilate/para-amino 95.3 0.047 1.6E-06 55.7 8.8 89 221-331 447-537 (645)
121 3tqi_A GMP synthase [glutamine 95.2 0.034 1.2E-06 55.5 7.2 88 221-331 11-98 (527)
122 2w7t_A CTP synthetase, putativ 95.0 0.02 6.9E-07 52.0 4.6 96 18-128 9-111 (273)
123 3r75_A Anthranilate/para-amino 94.8 0.097 3.3E-06 53.4 9.5 89 16-128 445-536 (645)
124 2v4u_A CTP synthase 2; pyrimid 94.8 0.02 7E-07 52.4 4.1 102 16-128 24-134 (289)
125 1l9x_A Gamma-glutamyl hydrolas 94.5 0.03 1E-06 52.0 4.6 96 18-128 31-139 (315)
126 3tqi_A GMP synthase [glutamine 94.0 0.05 1.7E-06 54.3 5.2 88 17-128 10-97 (527)
127 1i1q_B Anthranilate synthase c 93.7 0.18 6.1E-06 42.9 7.6 90 222-331 2-92 (192)
128 1l9x_A Gamma-glutamyl hydrolas 93.7 0.061 2.1E-06 49.9 4.8 98 220-331 30-140 (315)
129 1gpm_A GMP synthetase, XMP ami 93.6 0.06 2.1E-06 53.7 5.0 88 221-331 8-95 (525)
130 1s1m_A CTP synthase; CTP synth 93.1 0.13 4.4E-06 51.1 6.4 226 79-330 133-387 (545)
131 3en0_A Cyanophycinase; serine 93.0 0.31 1.1E-05 44.4 8.2 97 221-330 57-160 (291)
132 1vco_A CTP synthetase; tetrame 92.7 0.12 4.1E-06 51.4 5.5 228 79-331 144-400 (550)
133 1i1q_B Anthranilate synthase c 91.3 0.48 1.6E-05 40.2 7.1 90 19-129 2-92 (192)
134 1gpm_A GMP synthetase, XMP ami 90.5 0.14 4.9E-06 50.9 3.4 88 17-128 7-94 (525)
135 3nva_A CTP synthase; rossman f 89.9 0.26 8.9E-06 48.4 4.5 97 16-127 292-393 (535)
136 2ywb_A GMP synthase [glutamine 89.9 0.32 1.1E-05 48.1 5.3 75 237-331 13-87 (503)
137 2vxo_A GMP synthase [glutamine 89.8 0.15 5E-06 52.5 2.8 88 221-331 30-117 (697)
138 3en0_A Cyanophycinase; serine 88.5 0.43 1.5E-05 43.5 4.7 100 18-129 57-161 (291)
139 1s1m_A CTP synthase; CTP synth 87.3 0.5 1.7E-05 46.9 4.6 45 79-128 343-387 (545)
140 1vco_A CTP synthetase; tetrame 86.5 0.51 1.7E-05 46.9 4.2 45 79-128 355-399 (550)
141 3rht_A (gatase1)-like protein; 85.0 2 6.9E-05 38.3 7.0 84 219-323 3-87 (259)
142 2vxo_A GMP synthase [glutamine 84.2 0.26 9E-06 50.7 0.9 89 17-129 29-117 (697)
143 2ywb_A GMP synthase [glutamine 82.4 0.83 2.8E-05 45.1 3.7 75 34-129 13-87 (503)
144 3rht_A (gatase1)-like protein; 81.6 3.5 0.00012 36.7 7.1 85 16-120 3-87 (259)
145 1jg7_A BGT, DNA beta-glucosylt 76.9 3.2 0.00011 35.6 4.9 59 221-290 1-66 (351)
146 3d3j_A Enhancer of mRNA-decapp 76.4 24 0.00084 32.0 11.3 103 221-327 133-246 (306)
147 2ark_A Flavodoxin; FMN, struct 75.0 5.4 0.00018 33.3 6.1 86 16-121 3-97 (188)
148 3d3k_A Enhancer of mRNA-decapp 72.7 25 0.00087 31.0 10.2 103 221-327 86-199 (259)
149 3f6r_A Flavodoxin; FMN binding 72.2 4.1 0.00014 32.4 4.4 88 220-324 1-94 (148)
150 2a5l_A Trp repressor binding p 68.2 9.9 0.00034 31.7 6.3 99 220-324 5-117 (200)
151 3hly_A Flavodoxin-like domain; 67.0 7 0.00024 31.7 4.9 89 221-324 1-91 (161)
152 2zuv_A Lacto-N-biose phosphory 66.7 16 0.00053 36.9 7.9 91 219-325 437-546 (759)
153 2ark_A Flavodoxin; FMN, struct 66.1 9.8 0.00033 31.6 5.7 84 220-323 4-96 (188)
154 2r47_A Uncharacterized protein 65.7 2.5 8.4E-05 34.2 1.7 103 220-332 26-133 (157)
155 1ydg_A Trp repressor binding p 65.3 10 0.00034 32.1 5.8 99 219-323 5-123 (211)
156 2a5l_A Trp repressor binding p 65.0 11 0.00037 31.4 5.9 101 17-123 5-119 (200)
157 1u0t_A Inorganic polyphosphate 64.0 18 0.00061 32.8 7.5 93 17-120 4-107 (307)
158 1u0t_A Inorganic polyphosphate 63.8 14 0.00046 33.7 6.6 95 220-325 4-109 (307)
159 1z0s_A Probable inorganic poly 63.7 8.1 0.00028 34.7 4.9 72 17-121 29-100 (278)
160 1jg7_A BGT, DNA beta-glucosylt 61.8 13 0.00046 31.8 5.5 59 18-87 1-66 (351)
161 2qv7_A Diacylglycerol kinase D 61.3 10 0.00034 35.0 5.3 95 16-129 23-123 (337)
162 2hna_A Protein MIOC, flavodoxi 60.4 43 0.0015 26.2 8.4 88 220-326 1-93 (147)
163 3hly_A Flavodoxin-like domain; 58.8 10 0.00036 30.6 4.4 91 18-123 1-93 (161)
164 3s40_A Diacylglycerol kinase; 58.1 12 0.0004 34.0 5.1 90 12-121 3-98 (304)
165 1t0b_A THUA-like protein; treh 57.2 22 0.00075 31.3 6.5 71 239-325 37-107 (252)
166 1ydg_A Trp repressor binding p 55.1 17 0.00059 30.6 5.4 102 16-123 5-126 (211)
167 4e5v_A Putative THUA-like prot 54.8 1.2E+02 0.0039 27.1 11.8 92 219-326 3-97 (281)
168 1z0s_A Probable inorganic poly 53.8 17 0.00058 32.6 5.2 72 220-324 29-100 (278)
169 3f6r_A Flavodoxin; FMN binding 53.5 54 0.0018 25.5 7.9 89 17-121 1-94 (148)
170 2r47_A Uncharacterized protein 53.3 6.2 0.00021 31.8 2.0 105 17-131 26-134 (157)
171 3b6i_A Flavoprotein WRBA; flav 53.1 32 0.0011 28.4 6.8 99 220-324 1-114 (198)
172 3ff4_A Uncharacterized protein 52.6 37 0.0013 26.1 6.4 65 15-87 2-66 (122)
173 1f4p_A Flavodoxin; electron tr 51.8 20 0.00067 28.1 4.9 87 221-324 1-93 (147)
174 2q9u_A A-type flavoprotein; fl 51.3 28 0.00095 32.8 6.8 90 219-324 255-350 (414)
175 2gk3_A Putative cytoplasmic pr 51.2 13 0.00043 32.9 4.0 76 235-323 41-126 (256)
176 4e5v_A Putative THUA-like prot 51.2 1.3E+02 0.0045 26.7 11.5 90 16-121 3-95 (281)
177 2i2c_A Probable inorganic poly 49.4 32 0.0011 30.5 6.5 66 18-120 1-69 (272)
178 2q9u_A A-type flavoprotein; fl 49.1 29 0.00099 32.6 6.5 92 16-123 255-352 (414)
179 2zuv_A Lacto-N-biose phosphory 48.0 55 0.0019 33.1 8.1 88 17-120 438-544 (759)
180 2an1_A Putative kinase; struct 47.8 13 0.00046 33.3 3.7 89 17-120 5-95 (292)
181 3fni_A Putative diflavin flavo 46.0 39 0.0013 27.1 6.0 91 220-324 4-96 (159)
182 2qv7_A Diacylglycerol kinase D 45.5 28 0.00096 31.9 5.6 93 220-331 24-123 (337)
183 3fni_A Putative diflavin flavo 45.1 34 0.0012 27.4 5.4 93 17-123 4-98 (159)
184 3tty_A Beta-GAL, beta-galactos 44.1 68 0.0023 32.6 8.6 62 32-120 426-487 (675)
185 3tty_A Beta-GAL, beta-galactos 44.1 56 0.0019 33.2 8.0 62 234-322 425-486 (675)
186 3b6i_A Flavoprotein WRBA; flav 43.5 44 0.0015 27.5 6.1 101 17-123 1-116 (198)
187 2hna_A Protein MIOC, flavodoxi 41.4 1.2E+02 0.0041 23.4 8.5 85 18-121 2-91 (147)
188 2an1_A Putative kinase; struct 40.9 22 0.00076 31.8 4.0 91 220-325 5-97 (292)
189 3ty2_A 5'-nucleotidase SURE; s 40.6 24 0.00081 31.2 3.9 45 213-258 4-48 (261)
190 3m9w_A D-xylose-binding peripl 40.1 23 0.00079 31.6 4.0 86 220-322 2-90 (313)
191 3pfn_A NAD kinase; structural 39.8 45 0.0015 31.1 5.9 97 15-121 36-141 (365)
192 2fz5_A Flavodoxin; alpha/beta 39.1 1.1E+02 0.0036 23.1 7.4 67 237-323 18-88 (137)
193 1t0b_A THUA-like protein; treh 38.9 71 0.0024 27.9 6.9 70 36-121 37-106 (252)
194 5nul_A Flavodoxin; electron tr 38.0 54 0.0018 25.1 5.5 75 230-324 10-88 (138)
195 2i2c_A Probable inorganic poly 37.7 68 0.0023 28.3 6.7 36 281-325 34-71 (272)
196 3l6u_A ABC-type sugar transpor 36.9 19 0.00066 31.6 2.9 89 217-322 5-96 (293)
197 2vzf_A NADH-dependent FMN redu 36.4 11 0.00036 31.7 1.0 99 220-324 2-111 (197)
198 2ohh_A Type A flavoprotein FPR 36.1 34 0.0012 31.9 4.7 91 219-325 255-353 (404)
199 3i83_A 2-dehydropantoate 2-red 35.9 44 0.0015 30.2 5.3 96 220-326 2-109 (320)
200 3hn2_A 2-dehydropantoate 2-red 34.9 32 0.0011 31.0 4.1 94 220-326 2-107 (312)
201 3kjx_A Transcriptional regulat 34.5 1E+02 0.0035 27.6 7.6 60 190-257 46-108 (344)
202 2bon_A Lipid kinase; DAG kinas 34.2 28 0.00095 31.9 3.6 96 220-334 29-131 (332)
203 3uug_A Multiple sugar-binding 34.1 29 0.001 31.0 3.7 88 219-323 2-92 (330)
204 3rss_A Putative uncharacterize 33.8 1.5E+02 0.0051 28.8 8.9 109 220-334 52-171 (502)
205 4ici_A Putative flavoprotein; 33.8 86 0.0029 25.3 6.2 42 78-122 86-127 (171)
206 3nq4_A 6,7-dimethyl-8-ribityll 33.0 60 0.002 26.2 4.8 93 219-320 11-114 (156)
207 3m9w_A D-xylose-binding peripl 32.9 37 0.0013 30.1 4.2 87 17-120 2-91 (313)
208 3l6u_A ABC-type sugar transpor 32.7 27 0.00092 30.6 3.1 90 14-120 5-97 (293)
209 2zki_A 199AA long hypothetical 32.7 48 0.0017 27.3 4.6 99 219-324 3-116 (199)
210 1sqs_A Conserved hypothetical 32.6 20 0.00067 31.1 2.1 101 220-324 1-125 (242)
211 1rtt_A Conserved hypothetical 32.5 15 0.00051 30.5 1.3 99 16-121 5-117 (193)
212 1y81_A Conserved hypothetical 32.2 1.6E+02 0.0055 22.7 7.4 65 16-87 13-77 (138)
213 3l49_A ABC sugar (ribose) tran 32.2 46 0.0016 29.0 4.6 88 219-323 4-94 (291)
214 1ykg_A SIR-FP, sulfite reducta 31.5 32 0.0011 27.7 3.2 88 220-324 9-102 (167)
215 3g1w_A Sugar ABC transporter; 31.4 29 0.00099 30.7 3.1 89 16-120 3-94 (305)
216 1eiw_A Hypothetical protein MT 31.3 1.7E+02 0.0057 22.0 7.6 71 20-120 5-75 (111)
217 3s40_A Diacylglycerol kinase; 30.4 60 0.002 29.2 5.1 96 218-333 6-109 (304)
218 3bio_A Oxidoreductase, GFO/IDH 30.4 1.4E+02 0.0047 26.7 7.6 88 12-116 4-93 (304)
219 3i9v_6 NADH-quinone oxidoreduc 30.3 34 0.0012 28.4 3.1 41 280-325 72-112 (181)
220 2fn9_A Ribose ABC transporter, 30.0 30 0.001 30.3 3.0 63 220-291 2-67 (290)
221 3tb6_A Arabinose metabolism tr 29.5 55 0.0019 28.5 4.7 93 14-120 12-107 (298)
222 3l49_A ABC sugar (ribose) tran 29.3 31 0.0011 30.2 2.9 89 15-120 3-94 (291)
223 2ohh_A Type A flavoprotein FPR 29.1 56 0.0019 30.4 4.8 92 16-123 255-354 (404)
224 3ff4_A Uncharacterized protein 28.6 1.2E+02 0.004 23.2 5.8 64 219-290 3-66 (122)
225 3gbv_A Putative LACI-family tr 28.6 44 0.0015 29.2 3.9 92 14-120 5-102 (304)
226 3gbv_A Putative LACI-family tr 27.9 36 0.0012 29.9 3.1 92 216-322 4-101 (304)
227 2phj_A 5'-nucleotidase SURE; S 27.5 60 0.002 28.5 4.3 38 220-258 1-38 (251)
228 1hqk_A 6,7-dimethyl-8-ribityll 27.2 84 0.0029 25.3 4.8 94 219-321 11-114 (154)
229 3jy6_A Transcriptional regulat 27.0 61 0.0021 28.0 4.5 86 218-323 5-93 (276)
230 2bon_A Lipid kinase; DAG kinas 26.2 37 0.0013 31.1 2.9 96 17-132 29-131 (332)
231 3uug_A Multiple sugar-binding 26.1 55 0.0019 29.1 4.1 87 17-120 3-92 (330)
232 2x7x_A Sensor protein; transfe 26.0 65 0.0022 28.8 4.5 87 218-322 4-94 (325)
233 1sqs_A Conserved hypothetical 25.9 39 0.0013 29.1 2.9 100 17-122 1-126 (242)
234 3okf_A 3-dehydroquinate syntha 25.8 4.1E+02 0.014 24.7 10.1 142 220-371 62-203 (390)
235 2wqk_A 5'-nucleotidase SURE; S 25.5 43 0.0015 29.4 3.1 38 220-258 1-38 (251)
236 3ius_A Uncharacterized conserv 25.1 2E+02 0.0068 24.7 7.6 66 17-89 5-73 (286)
237 3cs3_A Sugar-binding transcrip 24.8 3.2E+02 0.011 23.2 9.8 81 14-120 5-88 (277)
238 2b99_A Riboflavin synthase; lu 24.6 32 0.0011 27.8 1.8 93 220-321 2-98 (156)
239 3tb6_A Arabinose metabolism tr 24.1 70 0.0024 27.8 4.3 90 220-323 15-107 (298)
240 2c92_A 6,7-dimethyl-8-ribityll 23.9 83 0.0028 25.5 4.2 92 219-321 16-115 (160)
241 3i12_A D-alanine-D-alanine lig 23.6 2.7E+02 0.0093 25.4 8.5 39 220-258 3-46 (364)
242 3s2y_A Chromate reductase; ura 29.2 17 0.00058 30.6 0.0 103 15-121 4-118 (199)
243 3huu_A Transcription regulator 23.4 31 0.0011 30.5 1.8 40 218-257 20-67 (305)
244 1wui_S Periplasmic [NIFE] hydr 23.3 62 0.0021 28.7 3.7 45 280-325 67-115 (267)
245 1e5d_A Rubredoxin\:oxygen oxid 23.2 2.3E+02 0.0077 26.0 7.9 90 17-122 252-346 (402)
246 3eeq_A Putative cobalamin bios 22.9 71 0.0024 29.3 4.1 69 100-185 43-117 (336)
247 2i2x_B MTAC, methyltransferase 22.7 78 0.0027 27.7 4.2 62 219-292 122-184 (258)
248 1rvv_A Riboflavin synthase; tr 22.7 88 0.003 25.1 4.1 94 219-321 11-114 (154)
249 4gi5_A Quinone reductase; prot 22.4 97 0.0033 27.6 4.8 52 3-54 8-63 (280)
250 1e5d_A Rubredoxin\:oxygen oxid 22.4 92 0.0031 28.8 5.0 89 220-324 252-345 (402)
251 1t5b_A Acyl carrier protein ph 22.2 41 0.0014 27.7 2.2 88 220-313 1-114 (201)
252 3qbe_A 3-dehydroquinate syntha 22.1 4.7E+02 0.016 24.1 11.2 140 221-371 44-183 (368)
253 2i0f_A 6,7-dimethyl-8-ribityll 22.1 98 0.0034 24.9 4.3 94 221-320 13-115 (157)
254 1czn_A Flavodoxin; FMN binding 21.9 55 0.0019 26.1 2.9 84 221-324 1-89 (169)
255 3g85_A Transcriptional regulat 21.8 1.8E+02 0.0062 24.9 6.7 65 218-291 9-77 (289)
256 3cs3_A Sugar-binding transcrip 21.7 3.7E+02 0.013 22.7 10.7 41 217-257 5-48 (277)
257 2fn9_A Ribose ABC transporter, 21.6 60 0.0021 28.2 3.3 87 17-120 2-91 (290)
258 3dmn_A Putative DNA helicase; 21.3 1.6E+02 0.0056 23.6 5.8 61 221-290 62-122 (174)
259 3snk_A Response regulator CHEY 21.3 2.5E+02 0.0084 20.6 7.2 82 15-119 12-94 (135)
260 2dri_A D-ribose-binding protei 21.0 71 0.0024 27.5 3.6 62 221-291 2-66 (271)
261 3d3j_A Enhancer of mRNA-decapp 20.1 4.7E+02 0.016 23.3 11.9 100 17-120 132-242 (306)
262 2xgg_A Microneme protein 2; A/ 20.0 1.4E+02 0.0048 23.9 5.1 39 16-54 121-161 (178)
263 2pln_A HP1043, response regula 20.0 1.9E+02 0.0064 21.3 5.6 78 218-322 16-93 (137)
264 3ezx_A MMCP 1, monomethylamine 20.0 37 0.0013 29.0 1.4 79 219-311 91-172 (215)
No 1
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=100.00 E-value=1.4e-61 Score=474.29 Aligned_cols=341 Identities=18% Similarity=0.234 Sum_probs=305.9
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCc---------------eeEeccCcEEecCcccCCCCCCc
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQL---------------EVEASSGTRLVADTSISNCSHQV 79 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~---------------~v~~~~g~~v~~~~~~~~~~~~~ 79 (405)
.+++||+||++|||++.|+..++++|+++|++++++|++++. .++++.|..+.++..+++.++.+
T Consensus 10 ~~~~kv~ill~dg~e~~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 89 (396)
T 3uk7_A 10 ANSRTVLILCGDYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSK 89 (396)
T ss_dssp -CCCEEEEECCTTEEHHHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGG
T ss_pred hcCCeEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCccc
Confidence 346799999999999999999999999999999999998641 35677899999999999987778
Q ss_pred ccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--Ccccc---
Q 015523 80 FDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVK--- 154 (405)
Q Consensus 80 ~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~--- 154 (405)
||+|+||||+ +...+..++.+.+||+++++++++|+++|+|+ ++|+++|+|+|+++|+||...+.|++ .++++
T Consensus 90 ~D~livpGG~-~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~ 167 (396)
T 3uk7_A 90 YDGLVIPGGR-APEYLALTASVVELVKEFSRSGKPIASICHGQ-LILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPIT 167 (396)
T ss_dssp CSEEEECCBS-HHHHHTTCHHHHHHHHHHHHTTCCEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCCSS
T ss_pred CCEEEECCCc-chhhcccCHHHHHHHHHHHHcCCEEEEECchH-HHHHhccccCCCEeecCcchHHHHHHCCCEEECCCC
Confidence 9999999995 45557789999999999999999999999965 58999999999999999999888875 45544
Q ss_pred -CcEEEeCCeEcCCCcccHHHHHHHHHHHhcChHHHHHHHHhcccccccCccccccccccccccCCcCEEEEEeCCCCcH
Q 015523 155 -SNIHVSGEVTTSRGPGTSFEFALCLVEQLFGESVAKEIGELLLMHNADNSLKKEEFNEVEWFFDRMPRVLIPIANGSEE 233 (405)
Q Consensus 155 -~~~v~dg~iiT~~g~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~g~~~ 233 (405)
.++|+|||+|||+|+.++.+|++++|+++.|++. .+++||+|+++|||++
T Consensus 168 ~~~~v~Dg~iiT~~g~~~~~d~al~li~~l~g~~~-----------------------------~~~~ki~ill~dg~~~ 218 (396)
T 3uk7_A 168 PDVCVVDGSLITAATYEGHPEFIQLFVKALGGKIT-----------------------------GANKRILFLCGDYMED 218 (396)
T ss_dssp TTCEEEETTEEEESSGGGHHHHHHHHHHHTTCEEE-----------------------------CCCCEEEEECCTTEEH
T ss_pred CcceEecCCEEEecCcccHHHHHHHHHHHHhccch-----------------------------hccceEEEEecCCCcc
Confidence 3489999999999999999999999999998741 2468999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEeecCCce----------------eecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 234 IEIVTIVDILRRAKVDVVVASVERSTQ----------------IVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 234 ~e~~~~~~~l~~~~~~v~~vs~~~~~~----------------v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
.|+..+++.|+++||+++++|++++ + ++++.|..+.++..++++++.+||+|+||||. +...
T Consensus 219 ~e~~~~~~~l~~ag~~v~~vs~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~livpGg~-~~~~ 296 (396)
T 3uk7_A 219 YEVKVPFQSLQALGCQVDAVCPEKK-AGDRCPTAIHDFEGDQTYSEKPGHTFALTTNFDDLVSSSYDALVIPGGR-APEY 296 (396)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTCC-TTCEECEEEEECCSSSSCEEEECCCEECCSCGGGCCGGGCSEEEECCBS-HHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCC-CCcccccccccccccchhhhcCCceeeccCCHHHCCcccCCEEEECCCc-chhh
Confidence 9999999999999999999999986 4 45778999999999999877899999999997 4566
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCC----cEEEcCCeEecCCh
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGT----KVVVDGKVITSRGL 371 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~----~~v~dg~iiTa~g~ 371 (405)
+..++.+++||+++++++|+|++||+|+++|+++|||+|+++|+||...+.++. ..+.+. .+|.|||+|||+|+
T Consensus 297 ~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~ 376 (396)
T 3uk7_A 297 LALNEHVLNIVKEFMNSEKPVASICHGQQILAAAGVLKGRKCTAYPAVKLNVVLGGGTWLEPDPIDRCFTDGNLVTGAAW 376 (396)
T ss_dssp HTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSSTTCEEEETTEEEESSG
T ss_pred hccCHHHHHHHHHHHHCCCEEEEEchHHHHHHHcCCcCCCEEecCccHHHHHHHCCCEEEcCCCceeEEEcCCEEECCCc
Confidence 788999999999999999999999999999999999999999999999888765 444544 59999999999999
Q ss_pred hhHHHHHHHHHHHccCH
Q 015523 372 ANVIDFALAIVSKFFGH 388 (405)
Q Consensus 372 ~~~~~~~l~~i~~l~g~ 388 (405)
.++.+|++++|+++.|.
T Consensus 377 ~~~~d~~l~li~~l~~~ 393 (396)
T 3uk7_A 377 PGHPEFVSQLMALLGIQ 393 (396)
T ss_dssp GGHHHHHHHHHHHHTCE
T ss_pred hhHHHHHHHHHHHhccc
Confidence 99999999999999763
No 2
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=100.00 E-value=1.1e-38 Score=280.60 Aligned_cols=184 Identities=35% Similarity=0.619 Sum_probs=172.5
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecC-CceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVER-STQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~-~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
+++||+|+++|||++.|+..++++|+++||+++++|+++ + +++++.|+++.++..++++++.+||+|+||||......
T Consensus 4 m~kkv~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~-~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~~~ 82 (190)
T 4e08_A 4 MSKSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLNGGE-AVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGSNA 82 (190)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSSS-CEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHHHH
T ss_pred CCcEEEEEECCCchHHHHHHHHHHHHHCCCEEEEEECCCCc-ceecCCCcEEECCCCHHHCCcccCCEEEECCCChHHHH
Confidence 458999999999999999999999999999999999998 6 99999999999999999997788999999999645566
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc-Cccc-CCcEEEcCCeEecCChhhHH
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN-EVVN-GTKVVVDGKVITSRGLANVI 375 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~-~~~~-~~~~v~dg~iiTa~g~~~~~ 375 (405)
+..++.+++||+++++++|+|+++|+|+++|+++|||+||++|+||...+.|++ ..+. ++.+|.|||+|||+|+.+++
T Consensus 83 ~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiTs~g~~a~~ 162 (190)
T 4e08_A 83 MGESSLVGDLLRSQESGGGLIAAICAAPTVLAKHGVASGKSLTSYPSMKPQLVNNYSYVDDKTVVKDGNLITSRGPGTAY 162 (190)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGGGGSSSSSEECSSCSEEEETTEEEECSGGGHH
T ss_pred hhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCeEEeCcCHHHHHhcCCcccCCCcEEEECCEEECCChHHHH
Confidence 788999999999999999999999999999999999999999999999999987 3444 58999999999999999999
Q ss_pred HHHHHHHHHccCHHHHHHHHhhcccccC
Q 015523 376 DFALAIVSKFFGHARTRSVAEGLVFEYP 403 (405)
Q Consensus 376 ~~~l~~i~~l~g~~~a~~v~~~l~~~~~ 403 (405)
||++++|+++.|++.|++|++.|+++|.
T Consensus 163 d~al~li~~~~g~~~a~~va~~l~~~~~ 190 (190)
T 4e08_A 163 EFALKIAEELAGKEKVQEVAKGLLVAYN 190 (190)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHTCCC-
T ss_pred HHHHHHHHHhcCHHHHHHHHHhhCcccC
Confidence 9999999999999999999999999984
No 3
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=100.00 E-value=1.5e-38 Score=279.64 Aligned_cols=185 Identities=35% Similarity=0.565 Sum_probs=171.9
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
+++||+|+++|||++.|+..+.++|++++++++++|+++++++++++|+.+.+|..++++++.+||+|+||||+.....+
T Consensus 4 m~kkv~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~~~~ 83 (190)
T 4e08_A 4 MSKSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLNGGEAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGSNAM 83 (190)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSSSCEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHHHHH
T ss_pred CCcEEEEEECCCchHHHHHHHHHHHHHCCCEEEEEECCCCcceecCCCcEEECCCCHHHCCcccCCEEEECCCChHHHHh
Confidence 35799999999999999999999999999999999999833999999999999999999987789999999996455667
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC-Ccccc-CcEEEeCCeEcCCCcccHH
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT-FWAVK-SNIHVSGEVTTSRGPGTSF 173 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~-~~~~~-~~~v~dg~iiT~~g~~~~~ 173 (405)
..++.+++||+++++++++|+++|+|+ ++|+++|+|+|+++|+||...+.|++ +++++ +.+|+|||+|||+|+.+++
T Consensus 84 ~~~~~~~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiTs~g~~a~~ 162 (190)
T 4e08_A 84 GESSLVGDLLRSQESGGGLIAAICAAP-TVLAKHGVASGKSLTSYPSMKPQLVNNYSYVDDKTVVKDGNLITSRGPGTAY 162 (190)
T ss_dssp HHCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCSTTCEECCCGGGGGGSSSSSEECSSCSEEEETTEEEECSGGGHH
T ss_pred hhCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCCeEEeCcCHHHHHhcCCcccCCCcEEEECCEEECCChHHHH
Confidence 789999999999999999999999965 58999999999999999999999999 88885 7899999999999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHHhcccccc
Q 015523 174 EFALCLVEQLFGESVAKEIGELLLMHNA 201 (405)
Q Consensus 174 ~~~l~ii~~~~g~~~a~~~a~~l~~~~~ 201 (405)
||++++|+++.|++.|+++++.|+++++
T Consensus 163 d~al~li~~~~g~~~a~~va~~l~~~~~ 190 (190)
T 4e08_A 163 EFALKIAEELAGKEKVQEVAKGLLVAYN 190 (190)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHTCCC-
T ss_pred HHHHHHHHHhcCHHHHHHHHHhhCcccC
Confidence 9999999999999999999999999875
No 4
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=5.6e-38 Score=279.97 Aligned_cols=183 Identities=19% Similarity=0.345 Sum_probs=170.3
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhC--CCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRA--KVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~--~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
+++||+|+++|||++.|+..++++|+.+ +|+++++|++++ +++++.|+++.++..+++. ++||+|+||||. +..
T Consensus 3 ~~~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~-~V~~~~G~~v~~d~~~~~~--~~~D~livpGG~-~~~ 78 (211)
T 3mgk_A 3 LSYRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGG-LVESSQKVRVETSLYTRDE--NIEKILFVPGGS-GTR 78 (211)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCE-EEECTTCCEEEEBCCCCCS--SSEEEEEECCST-HHH
T ss_pred CceEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCC-eEecCCCcEEEeccchhhC--CCCCEEEECCCc-chh
Confidence 5689999999999999999999999998 499999999998 9999999999999999987 569999999996 556
Q ss_pred hhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhcC----cc-cCCcEEEcCCeEecCCh
Q 015523 297 RLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTNE----VV-NGTKVVVDGKVITSRGL 371 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~~----~~-~~~~~v~dg~iiTa~g~ 371 (405)
.+..++.+++||+++++++|+|++||+|+++|+++|||+||++|+||...+.|++. .+ .++.+|+|||+|||+|+
T Consensus 79 ~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G~ 158 (211)
T 3mgk_A 79 EKVNDDNFINFIGNMVKESKYIISVCTGSALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEARWVKDGNIYTSSGV 158 (211)
T ss_dssp HHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSCSEEEETTEEEECSH
T ss_pred hhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCCeEEEeCCEEECCCH
Confidence 67789999999999999999999999999999999999999999999999988862 33 47899999999999999
Q ss_pred hhHHHHHHHHHHHccCHHHHHHHHhhcccccCCC
Q 015523 372 ANVIDFALAIVSKFFGHARTRSVAEGLVFEYPRS 405 (405)
Q Consensus 372 ~~~~~~~l~~i~~l~g~~~a~~v~~~l~~~~~r~ 405 (405)
.+++||++++|++++|++.|++|++.|++++.|+
T Consensus 159 ~a~~dlal~lv~~~~G~~~A~~va~~l~~~~~r~ 192 (211)
T 3mgk_A 159 SAGIDMTLGFIEDLIGKEKALEISRSIEYFWNED 192 (211)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHTCCCCCC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHhcEECCcCC
Confidence 9999999999999999999999999999999873
No 5
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=100.00 E-value=1.4e-37 Score=275.02 Aligned_cols=185 Identities=36% Similarity=0.543 Sum_probs=170.8
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCc-CCCCccEEEEcCCccchHh
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDA-AESVYDLIILPGGVAGAER 297 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~-~~~~~D~livpgG~~~~~~ 297 (405)
+++||+|+++|||++.|+..++++|+++||+++++|++++.++.++.|+++.++..++++ ++.+||+|+||||......
T Consensus 2 m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~~~ 81 (197)
T 2rk3_A 2 ASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQN 81 (197)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHHHH
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCCccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhHHH
Confidence 357999999999999999999999999999999999998658999999999999999987 7789999999999744566
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhcC---cccCCcEEEcCCeEecCChhhH
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTNE---VVNGTKVVVDGKVITSRGLANV 374 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~~---~~~~~~~v~dg~iiTa~g~~~~ 374 (405)
+..++.+++||+++++++|+|++||+|+++|+++|+|+||++|+||...+.|++. .+.++.+|.|||+|||+|+.++
T Consensus 82 l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~~~v~Dg~iiTs~g~~a~ 161 (197)
T 2rk3_A 82 LSESAAVKEILKEQENRKGLIATICAGPTALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTS 161 (197)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCCSEEEETTEEEECSGGGH
T ss_pred hhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCCCEEEeCCEEECCCHHHH
Confidence 7889999999999999999999999999999999999999999999999999762 3788999999999999999999
Q ss_pred HHHHHHHHHHccCHHHHHHHHhhcccccC
Q 015523 375 IDFALAIVSKFFGHARTRSVAEGLVFEYP 403 (405)
Q Consensus 375 ~~~~l~~i~~l~g~~~a~~v~~~l~~~~~ 403 (405)
++|++++|+++.|++.|+++++.|++++.
T Consensus 162 ~d~al~li~~l~g~~~a~~va~~~~~~~~ 190 (197)
T 2rk3_A 162 FEFALAIVEALNGKEVAAQVKAPLVLKDL 190 (197)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHGGGTC---
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999998764
No 6
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=100.00 E-value=2.3e-37 Score=279.59 Aligned_cols=182 Identities=26% Similarity=0.385 Sum_probs=171.1
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHh-CCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRR-AKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~-~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
+++||+|+++|||.+.|+..++++|+. .+|+++++|++++ ++.+++|+.+.++..++++ ++||+|+||||. +...
T Consensus 4 m~~~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~-~V~~~~G~~v~~d~~l~~~--~~~D~livpGG~-g~~~ 79 (231)
T 3noq_A 4 MAVQIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPG-PVVASSGLVLQATTSFADC--PPLDVICIPGGT-GVGA 79 (231)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSE-EEECTTSCEEEECEETTTC--CCCSEEEECCST-THHH
T ss_pred CcEEEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCC-cEEcCCCCEEecccChhHC--CcCCEEEECCCC-Chhh
Confidence 468999999999999999999999999 7899999999998 9999999999999999998 679999999996 5666
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCCcEEEcCCeEecCChhhHH
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGTKVVVDGKVITSRGLANVI 375 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiTa~g~~~~~ 375 (405)
+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++ ..+.++.+|.|||+|||+|+.+++
T Consensus 80 ~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~~ 159 (231)
T 3noq_A 80 LMEDPQALAFIRQQAARARYVTSVSTGSLVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHERVVRDGNLLTGGGITAGI 159 (231)
T ss_dssp HTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCSSEEEETTEEEECSTTHHH
T ss_pred hccCHHHHHHHHHHHhcCCEEEEECHHHHHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCCcEEEeCCEEECCCHHHHH
Confidence 788999999999999999999999999999999999999999999999998875 456788999999999999999999
Q ss_pred HHHHHHHHHccCHHHHHHHHhhcccccCC
Q 015523 376 DFALAIVSKFFGHARTRSVAEGLVFEYPR 404 (405)
Q Consensus 376 ~~~l~~i~~l~g~~~a~~v~~~l~~~~~r 404 (405)
||++++|++++|++.|++|++.|.|++.+
T Consensus 160 d~aL~li~~~~G~~~A~~va~~l~~~~~~ 188 (231)
T 3noq_A 160 DFALTLAAELFDAATAQRVQLQLEYAPAP 188 (231)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHcCHHHHHHHHHhceeCCCC
Confidence 99999999999999999999999998754
No 7
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=100.00 E-value=3.4e-38 Score=279.59 Aligned_cols=181 Identities=19% Similarity=0.317 Sum_probs=162.9
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCC------CeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCc
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAK------VDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGV 292 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~------~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~ 292 (405)
+++||+|+++|||.+.|+..++++|+.+| |+++++|++++ +++++.|+++.++ .++++++.+||+|+||||.
T Consensus 4 ~~~~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~-~v~~~~G~~i~~d-~l~~~~~~~~D~livpGG~ 81 (202)
T 3gra_A 4 APYRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGD-RVLSDLGLELVAT-ELSAAALKELDLLVVCGGL 81 (202)
T ss_dssp -CEEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSS-EEEBTTSCEEECE-ECCSGGGTTCSEEEEECCT
T ss_pred CcEEEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC-ceEcCCCCEEECC-CcccccCCCCCEEEEeCCC
Confidence 46899999999999999999999999986 99999999998 9999999999999 9999666899999999997
Q ss_pred cchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc----CcccCCcEEEcCCeEec
Q 015523 293 AGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN----EVVNGTKVVVDGKVITS 368 (405)
Q Consensus 293 ~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~----~~~~~~~~v~dg~iiTa 368 (405)
... .. . +.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++ ..+.++.+|.|||+|||
T Consensus 82 ~~~-~~-~-~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~v~dg~iiTs 158 (202)
T 3gra_A 82 RTP-LK-Y-PELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSA 158 (202)
T ss_dssp TCC-SC-C-TTHHHHHHHHHHHTCEEEEETTHHHHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEECSSSEEEETTEEEE
T ss_pred chh-hc-c-HHHHHHHHHHHhhCCEEEEECHHHHHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEecCCeEEEeCCEEEC
Confidence 432 22 4 89999999999999999999999999999999999999999999888865 35667799999999999
Q ss_pred CChhhHHHHHHHHHHHccCHHHHHHHHhhcccccCC
Q 015523 369 RGLANVIDFALAIVSKFFGHARTRSVAEGLVFEYPR 404 (405)
Q Consensus 369 ~g~~~~~~~~l~~i~~l~g~~~a~~v~~~l~~~~~r 404 (405)
+|+.+++||++++|++++|++.|+++++.|++++.|
T Consensus 159 ~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~~~ 194 (202)
T 3gra_A 159 ASPNGAMELMLGLVRRLYGDGLAEGVEEILSFSGAR 194 (202)
T ss_dssp SSHHHHHHHHHHHHHHHHCHHHHHHHHHHHC-----
T ss_pred CCHHHHHHHHHHHHHHHhCHHHHHHHHHHhCcCccc
Confidence 999999999999999999999999999999999987
No 8
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=100.00 E-value=1.2e-37 Score=277.65 Aligned_cols=190 Identities=37% Similarity=0.631 Sum_probs=170.9
Q ss_pred CCCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh
Q 015523 14 PSFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV 93 (405)
Q Consensus 14 ~~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~ 93 (405)
..+++||+|+++|||+..|+..++++|++++|+++++|++++.++++++|+++.+|..++++++.+||+|+||||+....
T Consensus 6 ~~m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~~ 85 (208)
T 3ot1_A 6 QGMSKRILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQ 85 (208)
T ss_dssp ---CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSCSEEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHHH
T ss_pred cccCCeEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCcceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHHH
Confidence 34567999999999999999999999999999999999996239999999999999999999777899999999954466
Q ss_pred ccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCCCccccCcEEEe--CCeEcCCCccc
Q 015523 94 RLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPTFWAVKSNIHVS--GEVTTSRGPGT 171 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~~v~d--g~iiT~~g~~~ 171 (405)
.+..++.+++||+++++++|+|+++|+|++++|+++|+|+|+++|+||...+.|.+.++.++++++| ||+|||+|+.+
T Consensus 86 ~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~vv~d~dg~iiTs~g~~a 165 (208)
T 3ot1_A 86 AFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGARMTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGT 165 (208)
T ss_dssp HHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTCCBCCCGGGGGGSCTTTBCCSSEEEEGGGTEEEECSGGG
T ss_pred HHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCCEEEECccHHHHccCCccccCcEEEeCCCCEEECCCHHH
Confidence 6778999999999999999999999997536899999999999999999999997777888888875 59999999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHhcccccccC
Q 015523 172 SFEFALCLVEQLFGESVAKEIGELLLMHNADN 203 (405)
Q Consensus 172 ~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~ 203 (405)
++||++++|+++.|++.|+++++.|++++..+
T Consensus 166 ~~d~al~lv~~l~G~~~a~~va~~l~~~~~~~ 197 (208)
T 3ot1_A 166 ALEFALAMIALLAGVELAQHVAAPMVLHPQQL 197 (208)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHGGGTCCHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHhheeCCCCC
Confidence 99999999999999999999999999954433
No 9
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=100.00 E-value=9e-38 Score=278.37 Aligned_cols=183 Identities=31% Similarity=0.558 Sum_probs=170.5
Q ss_pred CCcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecC-CceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 218 DRMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVER-STQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 218 ~~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~-~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
.+++||+|+++|||++.|+..++++|+.+||+++++|+++ + ++.++.|+++.++..++++++.+||+|+||||..+..
T Consensus 7 ~m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~-~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~~ 85 (208)
T 3ot1_A 7 GMSKRILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGDKL-QVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQ 85 (208)
T ss_dssp --CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSCS-EEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHHH
T ss_pred ccCCeEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCc-ceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHHH
Confidence 3568999999999999999999999999999999999996 5 9999999999999999998778999999999975566
Q ss_pred hhhcChHHHHHHHHHhhcCCEEEEEchHH-HHHHHcCCCCCCeeecCcchhhhhhcCcccCCcEEE--cCCeEecCChhh
Q 015523 297 RLQKSRILKKLLKEQKVAGRIYGAVCSSP-IVLHKHGLLKAKKATAHPSVIGKLTNEVVNGTKVVV--DGKVITSRGLAN 373 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~~~~k~i~aic~g~-~~La~aGlL~g~~~t~~~~~~~~l~~~~~~~~~~v~--dg~iiTa~g~~~ 373 (405)
.+..++.+++||+++++++|+|++||+|+ ++|+++|||+||++|+||...+.|.+..+.++.+|. |||+|||+|+.+
T Consensus 86 ~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~vv~d~dg~iiTs~g~~a 165 (208)
T 3ot1_A 86 AFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGARMTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGT 165 (208)
T ss_dssp HHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTCCBCCCGGGGGGSCTTTBCCSSEEEEGGGTEEEECSGGG
T ss_pred HHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCCEEEECccHHHHccCCccccCcEEEeCCCCEEECCCHHH
Confidence 67899999999999999999999999999 999999999999999999999999887777778887 459999999999
Q ss_pred HHHHHHHHHHHccCHHHHHHHHhhcccc
Q 015523 374 VIDFALAIVSKFFGHARTRSVAEGLVFE 401 (405)
Q Consensus 374 ~~~~~l~~i~~l~g~~~a~~v~~~l~~~ 401 (405)
++||++++|+++.|++.|++|++.|+++
T Consensus 166 ~~d~al~lv~~l~G~~~a~~va~~l~~~ 193 (208)
T 3ot1_A 166 ALEFALAMIALLAGVELAQHVAAPMVLH 193 (208)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHGGGTCC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHhheeC
Confidence 9999999999999999999999999984
No 10
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=1.1e-37 Score=277.18 Aligned_cols=186 Identities=36% Similarity=0.580 Sum_probs=176.1
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCc--eeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERST--QIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~--~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
++||+|+++|||++.|+..++++|+++||+++++|++++. ++.++.|+.+.++..++++++.+||+|+||||..+...
T Consensus 2 ~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~~~ 81 (205)
T 2ab0_A 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAEC 81 (205)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHH
T ss_pred CcEEEEEEcCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCCceeecCCCeEEecCCCHHHCCcccCCEEEECCCcccHHH
Confidence 5799999999999999999999999999999999999865 79999999999999999987789999999999755666
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchHH-HHHHHcCCCCCCeeecCcchhhhhhcCcccCCcEEEcCCe--EecCChhhH
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSSP-IVLHKHGLLKAKKATAHPSVIGKLTNEVVNGTKVVVDGKV--ITSRGLANV 374 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g~-~~La~aGlL~g~~~t~~~~~~~~l~~~~~~~~~~v~dg~i--iTa~g~~~~ 374 (405)
+..++.+++||+++++++|+|++||+|+ ++|+++|||+||++|+||.+.+.+++..+.+..+|+|||+ |||+|+.++
T Consensus 82 l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~~T~~~~~~~~~~~~~~~~~~vv~Dg~i~viTs~g~~s~ 161 (205)
T 2ab0_A 82 FRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTA 161 (205)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSCBCCCGGGGGGSCTTTBCCCSEEEETTTTEEEECSGGGH
T ss_pred hccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCeEEeCccHHHHccCCEEecCCEEEeCCcCeEECcChhhH
Confidence 7789999999999999999999999999 9999999999999999999999998877888899999999 999999999
Q ss_pred HHHHHHHHHHccCHHHHHHHHhhcccccCCC
Q 015523 375 IDFALAIVSKFFGHARTRSVAEGLVFEYPRS 405 (405)
Q Consensus 375 ~~~~l~~i~~l~g~~~a~~v~~~l~~~~~r~ 405 (405)
++|++++++++.|.+.|+++++.|++++.|+
T Consensus 162 ~d~al~li~~l~g~~~a~~va~~l~~~~~r~ 192 (205)
T 2ab0_A 162 IDFGLKIIDLLVGREKAHEVASQLVMAAGIY 192 (205)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTTCCTTSC
T ss_pred HHHHHHHHHHhcChHHHHHHHHhcccCCCCC
Confidence 9999999999999999999999999999885
No 11
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=100.00 E-value=4.7e-37 Score=280.35 Aligned_cols=184 Identities=17% Similarity=0.289 Sum_probs=170.9
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHH-HhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDIL-RRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l-~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
+++||+|+++|||.+.|+..++++| ...+|+++++|++++ +|.++.|+.+.++..+++++ .+||+|+||||..+...
T Consensus 22 m~~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~-~V~~~~G~~i~~d~~l~~~~-~~yD~liVPGG~~g~~~ 99 (253)
T 3ewn_A 22 GDEQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLD-PVTSDAGLAIVPTATFGTCP-RDLTVLFAPGGTDGTLA 99 (253)
T ss_dssp CCCEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSS-CEECTTSCEECCSEETTTSC-SSCSEEEECCBSHHHHH
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCC-eEEcCCCCEEeCCcCHHHcC-CCCCEEEECCCccchhh
Confidence 4589999999999999999999999 567899999999998 99999999999999999985 47899999999634566
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCCcEEEcCCeEecCChhhHH
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGTKVVVDGKVITSRGLANVI 375 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiTa~g~~~~~ 375 (405)
+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++ ..+.++.+|+|||+|||+|+.+++
T Consensus 100 l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~i 179 (253)
T 3ewn_A 100 AASDAETLAFMADRGARAKYITSVCSGSLILGAAGLLKGYKATSHWSCRDALAGFGAIPTEARVVRDRNRITGAGVTAGL 179 (253)
T ss_dssp HTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCSSEEEETTEEEECSTTHHH
T ss_pred hccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCCcEEEECCEEECCCHHHHH
Confidence 778999999999999999999999999999999999999999999999998875 455688999999999999999999
Q ss_pred HHHHHHHHHccCHHHHHHHHhhcccccCC
Q 015523 376 DFALAIVSKFFGHARTRSVAEGLVFEYPR 404 (405)
Q Consensus 376 ~~~l~~i~~l~g~~~a~~v~~~l~~~~~r 404 (405)
||++++|++++|++.|++|++.|+|++.+
T Consensus 180 dlaL~lv~~l~G~~~A~~va~~l~~~~~~ 208 (253)
T 3ewn_A 180 DFGLSMVAELRDQTYAECAQLMSEYDPDP 208 (253)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHcCHHHHHHHHHhcccCCCC
Confidence 99999999999999999999999998754
No 12
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=100.00 E-value=3.3e-37 Score=271.38 Aligned_cols=182 Identities=26% Similarity=0.436 Sum_probs=165.0
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCC--ceeecCCCcEEeeCCCccCcCC-----CCccEEEEcCC
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERS--TQIVASQGVKIIADKSISDAAE-----SVYDLIILPGG 291 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~--~~v~~~~g~~v~~~~~l~~~~~-----~~~D~livpgG 291 (405)
+|+||+|+++|||++.|+..|+++|+++|++++++++..+ ..++++.|+++.+|..+++++. .+||+|+||||
T Consensus 3 ~M~kV~ill~dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPGG 82 (194)
T 4gdh_A 3 HMVKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGG 82 (194)
T ss_dssp --CCEEEEEETTCCHHHHHHHHHHHHHTTCCEEEEEESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECCC
T ss_pred CCCEEEEEECCCcCHHHHHHHHHHHHHCCCeEEEEEEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEEECCC
Confidence 6899999999999999999999999999999999998543 3689999999999999998754 35999999999
Q ss_pred ccchHhhhcChHHHHHHHHHhhc-CCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCCcEEEcCCeEec
Q 015523 292 VAGAERLQKSRILKKLLKEQKVA-GRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGTKVVVDGKVITS 368 (405)
Q Consensus 292 ~~~~~~~~~~~~l~~~l~~~~~~-~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiTa 368 (405)
..++..+..++.+++||++++++ +|+|++||+|+ +|+.+|+|+||++|+||...+.|++ ..+.++++|+|||+|||
T Consensus 83 ~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~-~l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d~~vV~Dg~iiTs 161 (194)
T 4gdh_A 83 GLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGT-LTAKTSGLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITS 161 (194)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGG-HHHHHTTCCCSEECCCGGGHHHHHHTTCEECCSSEEEETTEEEE
T ss_pred chhHhHhhhCHHHHHHHHHhhhcCCceEEeecccc-cchhhceecCCceEecCcHHHHHHhcCCeeecceEEEcCCEEEC
Confidence 86778889999999999999865 79999999998 5677788999999999999999986 57789999999999999
Q ss_pred CChhhHHHHHHHHHHHccCHHHHHHHHhhcccc
Q 015523 369 RGLANVIDFALAIVSKFFGHARTRSVAEGLVFE 401 (405)
Q Consensus 369 ~g~~~~~~~~l~~i~~l~g~~~a~~v~~~l~~~ 401 (405)
+|+.++++|++++|++++|++.|++|++.|+++
T Consensus 162 ~g~~~~~d~al~lve~l~G~~~a~~va~~l~~P 194 (194)
T 4gdh_A 162 QGPGTAMLFGLKLLEQVASKDKYNAVYKSLSMP 194 (194)
T ss_dssp CSGGGHHHHHHHHHHHHSCHHHHHHHHHHTTCC
T ss_pred CCHhHHHHHHHHHHHHHcCHHHHHHHHhhccCC
Confidence 999999999999999999999999999999875
No 13
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.8e-37 Score=276.64 Aligned_cols=190 Identities=17% Similarity=0.229 Sum_probs=171.8
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhc--CCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRA--GAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV 93 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~--~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~ 93 (405)
+++||+||++|||++.|+..+.++|+++ +|+++++|++++ ++++++|+.+.+|..+++.+ .||+|+||||. +..
T Consensus 3 ~~~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~-~V~~~~G~~v~~d~~~~~~~--~~D~livpGG~-~~~ 78 (211)
T 3mgk_A 3 LSYRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGG-LVESSQKVRVETSLYTRDEN--IEKILFVPGGS-GTR 78 (211)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCE-EEECTTCCEEEEBCCCCCSS--SEEEEEECCST-HHH
T ss_pred CceEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCC-eEecCCCcEEEeccchhhCC--CCCEEEECCCc-chh
Confidence 5789999999999999999999999998 599999999997 99999999999999999876 59999999994 566
Q ss_pred ccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC-C---ccc-cCcEEEeCCeEcCCC
Q 015523 94 RLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT-F---WAV-KSNIHVSGEVTTSRG 168 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~-~---~~~-~~~~v~dg~iiT~~g 168 (405)
.+..++.+++||+++++++++|+++|+| .++|+++|+|+|+++|+||...+.|++ + .+. ++.+|+|||+|||+|
T Consensus 79 ~~~~~~~~~~~l~~~~~~~k~iaaiC~G-~~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G 157 (211)
T 3mgk_A 79 EKVNDDNFINFIGNMVKESKYIISVCTG-SALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEARWVKDGNIYTSSG 157 (211)
T ss_dssp HHTTCHHHHHHHHHHHHHCSEEEECTTH-HHHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSCSEEEETTEEEECS
T ss_pred hhcCCHHHHHHHHHHHHcCCEEEEEchH-HHHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCCeEEEeCCEEECCC
Confidence 6778899999999999999999999996 568999999999999999999998887 3 444 568999999999999
Q ss_pred cccHHHHHHHHHHHhcChHHHHHHHHhcccccccCcccccccc
Q 015523 169 PGTSFEFALCLVEQLFGESVAKEIGELLLMHNADNSLKKEEFN 211 (405)
Q Consensus 169 ~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~~~~~~~~~ 211 (405)
+.+++||++++|+++.|++.|+++++.|++++.|+ ..+.+|.
T Consensus 158 ~~a~~dlal~lv~~~~G~~~A~~va~~l~~~~~r~-~~q~~f~ 199 (211)
T 3mgk_A 158 VSAGIDMTLGFIEDLIGKEKALEISRSIEYFWNED-SNYDPFS 199 (211)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHTCCCCCC-CSCCGGG
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHhcEECCcCC-CCCchhH
Confidence 99999999999999999999999999999998876 3445554
No 14
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=4.7e-37 Score=273.20 Aligned_cols=188 Identities=33% Similarity=0.542 Sum_probs=174.3
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCc--eeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQL--EVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~--~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~ 94 (405)
++||+|+++|||+..|+..++++|++++|++++++++++. ++.+++|+.+.++..++++++.+||+|+||||......
T Consensus 2 ~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~~~ 81 (205)
T 2ab0_A 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAEC 81 (205)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHH
T ss_pred CcEEEEEEcCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCCceeecCCCeEEecCCCHHHCCcccCCEEEECCCcccHHH
Confidence 5699999999999999999999999999999999999864 89999999999999998887678999999999544566
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCCCccccCcEEEeCCe--EcCCCcccH
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPTFWAVKSNIHVSGEV--TTSRGPGTS 172 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~~v~dg~i--iT~~g~~~~ 172 (405)
+..++.+.+||+++++++++|+++|+|++++|+++|+|+|+++|+||.+.+.+.+..+.++++|+|||+ |||+|+.++
T Consensus 82 l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~~T~~~~~~~~~~~~~~~~~~vv~Dg~i~viTs~g~~s~ 161 (205)
T 2ab0_A 82 FRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTA 161 (205)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSCBCCCGGGGGGSCTTTBCCCSEEEETTTTEEEECSGGGH
T ss_pred hccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCeEEeCccHHHHccCCEEecCCEEEeCCcCeEECcChhhH
Confidence 778999999999999999999999997636899999999999999999999998877788899999999 999999999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHhcccccccCc
Q 015523 173 FEFALCLVEQLFGESVAKEIGELLLMHNADNS 204 (405)
Q Consensus 173 ~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~~ 204 (405)
.||++++|+++.|.+.|+++++.|++++.|..
T Consensus 162 ~d~al~li~~l~g~~~a~~va~~l~~~~~r~~ 193 (205)
T 2ab0_A 162 IDFGLKIIDLLVGREKAHEVASQLVMAAGIYN 193 (205)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTTCCTTSCC
T ss_pred HHHHHHHHHHhcChHHHHHHHHhcccCCCCCc
Confidence 99999999999999999999999999988873
No 15
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=100.00 E-value=4.2e-37 Score=280.66 Aligned_cols=184 Identities=16% Similarity=0.233 Sum_probs=170.0
Q ss_pred CcEEEEEecCCCchhhHHHHHHHH-HhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVL-RRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l-~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
++||+||++|||+..|+..++++| +..+|+++++|++++ +|++++|+.+.+|..+++++. +||+|+||||..+...+
T Consensus 23 ~~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~-~V~~~~G~~i~~d~~l~~~~~-~yD~liVPGG~~g~~~l 100 (253)
T 3ewn_A 23 DEQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLD-PVTSDAGLAIVPTATFGTCPR-DLTVLFAPGGTDGTLAA 100 (253)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSS-CEECTTSCEECCSEETTTSCS-SCSEEEECCBSHHHHHH
T ss_pred CeEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCC-eEEcCCCCEEeCCcCHHHcCC-CCCEEEECCCccchhhh
Confidence 379999999999999999999999 567999999999998 999999999999999999874 89999999995355667
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--CccccCcEEEeCCeEcCCCcccHH
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVKSNIHVSGEVTTSRGPGTSF 173 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiT~~g~~~~~ 173 (405)
..++.+++||+++++++++|+++|+| .++|+++|||+|+++||||...+.|++ ..++++++|+|||+|||+|+.+++
T Consensus 101 ~~~~~l~~~Lr~~~~~gk~IaaICtG-~~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~i 179 (253)
T 3ewn_A 101 ASDAETLAFMADRGARAKYITSVCSG-SLILGAAGLLKGYKATSHWSCRDALAGFGAIPTEARVVRDRNRITGAGVTAGL 179 (253)
T ss_dssp TTCHHHHHHHHHHHTTCSEEEEETTH-HHHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCSSEEEETTEEEECSTTHHH
T ss_pred ccCHHHHHHHHHHHHcCCEEEEEChH-HHHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCCcEEEECCEEECCCHHHHH
Confidence 78999999999999999999999996 568999999999999999999999987 445678899999999999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHHhcccccccC
Q 015523 174 EFALCLVEQLFGESVAKEIGELLLMHNADN 203 (405)
Q Consensus 174 ~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~ 203 (405)
||++++|+++.|.+.|+++++.|+|++.+.
T Consensus 180 dlaL~lv~~l~G~~~A~~va~~l~~~~~~p 209 (253)
T 3ewn_A 180 DFGLSMVAELRDQTYAECAQLMSEYDPDPP 209 (253)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHTTCCCCCS
T ss_pred HHHHHHHHHHcCHHHHHHHHHhcccCCCCC
Confidence 999999999999999999999999998665
No 16
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=100.00 E-value=6.7e-37 Score=276.51 Aligned_cols=183 Identities=27% Similarity=0.341 Sum_probs=169.8
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHh-cCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRR-AGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~-~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~ 94 (405)
+++||+||++|||+..|+..++++|++ .+|+++++|++++ +|++++|+.+.+|..+++++ +||+|+|||| .+...
T Consensus 4 m~~~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~-~V~~~~G~~v~~d~~l~~~~--~~D~livpGG-~g~~~ 79 (231)
T 3noq_A 4 MAVQIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPG-PVVASSGLVLQATTSFADCP--PLDVICIPGG-TGVGA 79 (231)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSE-EEECTTSCEEEECEETTTCC--CCSEEEECCS-TTHHH
T ss_pred CcEEEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCC-cEEcCCCCEEecccChhHCC--cCCEEEECCC-CChhh
Confidence 457999999999999999999999998 7999999999997 99999999999999999886 6999999999 45666
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--CccccCcEEEeCCeEcCCCcccH
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVKSNIHVSGEVTTSRGPGTS 172 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiT~~g~~~~ 172 (405)
+..++.+++||+++++++++|+++|+| .++|+++|+|+|+++||||...+.|++ ..++++++|+|||+|||+|+.++
T Consensus 80 ~~~~~~l~~~lr~~~~~g~~v~aiC~G-~~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~ 158 (231)
T 3noq_A 80 LMEDPQALAFIRQQAARARYVTSVSTG-SLVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHERVVRDGNLLTGGGITAG 158 (231)
T ss_dssp HTTCHHHHHHHHHHHTTCSEEEEETTH-HHHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCSSEEEETTEEEECSTTHH
T ss_pred hccCHHHHHHHHHHHhcCCEEEEECHH-HHHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCCcEEEeCCEEECCCHHHH
Confidence 778999999999999999999999996 568999999999999999999999976 34567889999999999999999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHhcccccccC
Q 015523 173 FEFALCLVEQLFGESVAKEIGELLLMHNADN 203 (405)
Q Consensus 173 ~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~ 203 (405)
+||++++|+++.|++.|+++++.|+|++.+.
T Consensus 159 ~d~aL~li~~~~G~~~A~~va~~l~~~~~~p 189 (231)
T 3noq_A 159 IDFALTLAAELFDAATAQRVQLQLEYAPAPP 189 (231)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHTTCCCCCS
T ss_pred HHHHHHHHHHHcCHHHHHHHHHhceeCCCCC
Confidence 9999999999999999999999999998655
No 17
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3e-37 Score=274.97 Aligned_cols=182 Identities=19% Similarity=0.220 Sum_probs=164.8
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCC-------CeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCC
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAK-------VDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGG 291 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~-------~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG 291 (405)
+++||+|+++|||.+.|+..++++|+.+| |+++++|++++ +++++.|+++.+|..++++ ++||+|+||||
T Consensus 7 ~~~~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~-~v~~~~G~~v~~d~~~~~~--~~~D~livpGg 83 (209)
T 3er6_A 7 KNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNR-PLIGRGGISVQPTAQWQSF--DFTNILIIGSI 83 (209)
T ss_dssp CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSS-CEEETTTEEEECSSCGGGC--SCCSEEEECCC
T ss_pred CCeEEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCC-ceecCCCeEEeCCcCcccc--CCCCEEEECCC
Confidence 57899999999999999999999999875 99999999998 9999999999999999988 78999999999
Q ss_pred ccchH-hhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc----Ccc-cCCcEEEcCCe
Q 015523 292 VAGAE-RLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN----EVV-NGTKVVVDGKV 365 (405)
Q Consensus 292 ~~~~~-~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~----~~~-~~~~~v~dg~i 365 (405)
..... .+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++ ..+ .++.+|+|||+
T Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~~v~Dg~i 163 (209)
T 3er6_A 84 GDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKAGLLQQNKAVMHSYFAHLFGELFPEIMLMTEQKALIDGNV 163 (209)
T ss_dssp SCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHTCCSSCEECCCHHHHHHHHHHCTTSEECTTCSEEEETTE
T ss_pred CCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHcCCCCCCeeEECHHHHHHHHHHCCCcEEecCCEEEEeCCE
Confidence 73222 2367999999999999999999999999999999999999999999998888865 334 44579999999
Q ss_pred EecCChhhHHHHHHHHHHHccCHHHHHHHHhhcccccC
Q 015523 366 ITSRGLANVIDFALAIVSKFFGHARTRSVAEGLVFEYP 403 (405)
Q Consensus 366 iTa~g~~~~~~~~l~~i~~l~g~~~a~~v~~~l~~~~~ 403 (405)
|||+|+.+++||++++|++++|++.|++|++.|++++.
T Consensus 164 iTs~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~~ 201 (209)
T 3er6_A 164 YLSSGPYSHSSVMLEIVEEYFGKHTRNLGNQFLSTIES 201 (209)
T ss_dssp EEECCSSCCHHHHHHHHHHHHCHHHHHHHHHHTTC---
T ss_pred EECCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999875
No 18
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=100.00 E-value=1.1e-37 Score=276.23 Aligned_cols=185 Identities=21% Similarity=0.240 Sum_probs=160.5
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcC------CEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCC
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAG------AQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGG 88 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~------~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg 88 (405)
.+++||+||++|||++.|+..+.++|+.++ |+++++|++++ ++++++|+++.+| .+++.+..+||+|+||||
T Consensus 3 ~~~~~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~-~v~~~~G~~i~~d-~l~~~~~~~~D~livpGG 80 (202)
T 3gra_A 3 LAPYRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGD-RVLSDLGLELVAT-ELSAAALKELDLLVVCGG 80 (202)
T ss_dssp --CEEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSS-EEEBTTSCEEECE-ECCSGGGTTCSEEEEECC
T ss_pred CCcEEEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC-ceEcCCCCEEECC-CcccccCCCCCEEEEeCC
Confidence 357899999999999999999999999885 99999999997 9999999999999 999865568999999999
Q ss_pred chhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC----CccccCcEEEeCCeE
Q 015523 89 MPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT----FWAVKSNIHVSGEVT 164 (405)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~----~~~~~~~~v~dg~ii 164 (405)
. ..... . +.+++||+++++++++|+++|+| .++|+++|+|+|+++||||...+.|++ ..+.++++|+|||+|
T Consensus 81 ~-~~~~~-~-~~l~~~l~~~~~~g~~iaaIC~G-~~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~v~dg~ii 156 (202)
T 3gra_A 81 L-RTPLK-Y-PELDRLLNDCAAHGMALGGLWNG-AWFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRL 156 (202)
T ss_dssp T-TCCSC-C-TTHHHHHHHHHHHTCEEEEETTH-HHHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEECSSSEEEETTEE
T ss_pred C-chhhc-c-HHHHHHHHHHHhhCCEEEEECHH-HHHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEecCCeEEEeCCEE
Confidence 5 33323 4 89999999999999999999996 568999999999999999999888876 345667899999999
Q ss_pred cCCCcccHHHHHHHHHHHhcChHHHHHHHHhcccccccCcc
Q 015523 165 TSRGPGTSFEFALCLVEQLFGESVAKEIGELLLMHNADNSL 205 (405)
Q Consensus 165 T~~g~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~~~ 205 (405)
||+|+.+++||++++|+++.|++.|+++++.|++++.++..
T Consensus 157 Ts~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~~~~~~ 197 (202)
T 3gra_A 157 SAASPNGAMELMLGLVRRLYGDGLAEGVEEILSFSGAREGH 197 (202)
T ss_dssp EESSHHHHHHHHHHHHHHHHCHHHHHHHHHHHC--------
T ss_pred ECCCHHHHHHHHHHHHHHHhCHHHHHHHHHHhCcCcccccc
Confidence 99999999999999999999999999999999999988743
No 19
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=100.00 E-value=6e-37 Score=264.57 Aligned_cols=166 Identities=18% Similarity=0.199 Sum_probs=157.1
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQ 299 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~ 299 (405)
+++|.|++.+||++.|+..|+++|+++|++++++|++++ +++++.|+++.+|..++++++.+||+|++|||+ +...++
T Consensus 8 ~~~v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~~-~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~-g~~~l~ 85 (177)
T 4hcj_A 8 NNILYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFIG-TAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGI-GCITLW 85 (177)
T ss_dssp CEEEEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSSE-EEEETTSCEEEECEEGGGCCGGGCSEEEECCSG-GGGGGT
T ss_pred CCEEEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-eEeeCCCCEEecCccHHHCCHhHCCEEEECCCc-cHHHHh
Confidence 456778889999999999999999999999999999998 999999999999999999999999999999997 567788
Q ss_pred cChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCCcEEEcCCeEecCChhhHHHH
Q 015523 300 KSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGTKVVVDGKVITSRGLANVIDF 377 (405)
Q Consensus 300 ~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiTa~g~~~~~~~ 377 (405)
.++.+++||+++++++|+|++||+|+++|+++|||+||++|+||..++.+++ ..+.++++|+|||+|||+|+.++.+|
T Consensus 86 ~~~~~~~~l~~~~~~~k~iaaIC~g~~~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~vV~Dg~liTs~g~~~~~~~ 165 (177)
T 4hcj_A 86 DDWRTQGLAKLFLDNQKIVAGIGSGVVIMANAKILEEINVTCLSADESHVRHGNANIMSENVVVSGNIVTANGPTSSKDF 165 (177)
T ss_dssp TCHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGGHHHH
T ss_pred hCHHHHHHHHHHHHhCCEEEEecccHHHHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCCEEEECCEEECCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999886 57889999999999999999999999
Q ss_pred HHHHHHHccC
Q 015523 378 ALAIVSKFFG 387 (405)
Q Consensus 378 ~l~~i~~l~g 387 (405)
++++++.|.+
T Consensus 166 a~~lve~L~s 175 (177)
T 4hcj_A 166 ANAVVGVLNS 175 (177)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998854
No 20
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=100.00 E-value=8e-37 Score=270.23 Aligned_cols=187 Identities=36% Similarity=0.549 Sum_probs=167.8
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCC-CCCcccEEEEcCCchhhhc
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNC-SHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~-~~~~~d~liipgg~~~~~~ 94 (405)
+++||+|+++|||+..|+..+.++|+++++++++++++++.++++++|+.+.++..+++. ++.+||+|+||||......
T Consensus 2 m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~~~ 81 (197)
T 2rk3_A 2 ASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQN 81 (197)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHHHH
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCCccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhHHH
Confidence 357999999999999999999999999999999999988548999999999999999887 5568999999999534555
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC-C--ccccCcEEEeCCeEcCCCccc
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT-F--WAVKSNIHVSGEVTTSRGPGT 171 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~-~--~~~~~~~v~dg~iiT~~g~~~ 171 (405)
+..++.+++||+++++++++|+++|+|+ ++|+++|+|+|+++|+||...+.|++ + .+.++.+|+|||+|||+|+.+
T Consensus 82 l~~~~~~~~~l~~~~~~gk~i~aiC~G~-~~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~~~v~Dg~iiTs~g~~a 160 (197)
T 2rk3_A 82 LSESAAVKEILKEQENRKGLIATICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGT 160 (197)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCCSEEEETTEEEECSGGG
T ss_pred hhhCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCCCEEEeCCEEECCCHHH
Confidence 7789999999999999999999999965 58999999999999999999999987 4 367888999999999999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHhcccccccC
Q 015523 172 SFEFALCLVEQLFGESVAKEIGELLLMHNADN 203 (405)
Q Consensus 172 ~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~ 203 (405)
++||++++|+++.|++.|+++++.|++++...
T Consensus 161 ~~d~al~li~~l~g~~~a~~va~~~~~~~~~~ 192 (197)
T 2rk3_A 161 SFEFALAIVEALNGKEVAAQVKAPLVLKDLEH 192 (197)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHGGGTC-----
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999887654
No 21
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=100.00 E-value=8.4e-37 Score=268.77 Aligned_cols=183 Identities=25% Similarity=0.347 Sum_probs=164.7
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCC--ceeEeccCcEEecCcccCCCCCC-----cccEEEEcC
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQ--LEVEASSGTRLVADTSISNCSHQ-----VFDLIALPG 87 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~--~~v~~~~g~~v~~~~~~~~~~~~-----~~d~liipg 87 (405)
++|+||+|+++|||++.|+..|+++|+++|++++++++..+ .++++++|+++.+|..+++++.. +||+|+|||
T Consensus 2 s~M~kV~ill~dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPG 81 (194)
T 4gdh_A 2 SHMVKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPG 81 (194)
T ss_dssp ---CCEEEEEETTCCHHHHHHHHHHHHHTTCCEEEEEESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECC
T ss_pred CCCCEEEEEECCCcCHHHHHHHHHHHHHCCCeEEEEEEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEEECC
Confidence 46889999999999999999999999999999999987542 36899999999999999988753 599999999
Q ss_pred CchhhhccccChHHHHHHHHHHHc-CCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--CccccCcEEEeCCeE
Q 015523 88 GMPGSVRLRDCEILKKITSKQAEE-KRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVKSNIHVSGEVT 164 (405)
Q Consensus 88 g~~~~~~~~~~~~~~~~l~~~~~~-~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~ii 164 (405)
|+.+...+.+++.+.+||++++++ +|+|+++|+| . +|+.+|+|+|+++|+||...+.|++ ..++++++|+|||+|
T Consensus 82 G~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g-~-~l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d~~vV~Dg~ii 159 (194)
T 4gdh_A 82 GGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAG-T-LTAKTSGLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLI 159 (194)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGG-G-HHHHHTTCCCSEECCCGGGHHHHHHTTCEECCSSEEEETTEE
T ss_pred CchhHhHhhhCHHHHHHHHHhhhcCCceEEeeccc-c-cchhhceecCCceEecCcHHHHHHhcCCeeecceEEEcCCEE
Confidence 976678888999999999999875 7999999996 4 4788999999999999999999887 678899999999999
Q ss_pred cCCCcccHHHHHHHHHHHhcChHHHHHHHHhcccc
Q 015523 165 TSRGPGTSFEFALCLVEQLFGESVAKEIGELLLMH 199 (405)
Q Consensus 165 T~~g~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~ 199 (405)
||+|+.+++||++++|+++.|++.|+++++.|+++
T Consensus 160 Ts~g~~~~~d~al~lve~l~G~~~a~~va~~l~~P 194 (194)
T 4gdh_A 160 TSQGPGTAMLFGLKLLEQVASKDKYNAVYKSLSMP 194 (194)
T ss_dssp EECSGGGHHHHHHHHHHHHSCHHHHHHHHHHTTCC
T ss_pred ECCCHhHHHHHHHHHHHHHcCHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999874
No 22
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.3e-36 Score=270.87 Aligned_cols=186 Identities=14% Similarity=0.131 Sum_probs=162.4
Q ss_pred CCCCcEEEEEecCCCchhhHHHHHHHHHhcC-------CEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEc
Q 015523 14 PSFALNVLVPVGFGTEEMEAVIIVDVLRRAG-------AQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALP 86 (405)
Q Consensus 14 ~~~~~ki~ill~~g~~~~e~~~~~~~l~~~~-------~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liip 86 (405)
+++++||+||++|||++.|+..+.++|+.++ |+++++|++++ ++++++|+++.+|..+++++ +||+|+||
T Consensus 5 ~~~~~~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~-~v~~~~G~~v~~d~~~~~~~--~~D~livp 81 (209)
T 3er6_A 5 NKKNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNR-PLIGRGGISVQPTAQWQSFD--FTNILIIG 81 (209)
T ss_dssp --CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSS-CEEETTTEEEECSSCGGGCS--CCSEEEEC
T ss_pred CCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCC-ceecCCCeEEeCCcCccccC--CCCEEEEC
Confidence 4567899999999999999999999999874 99999999997 99999999999999999875 79999999
Q ss_pred CCchh-hhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC-C---cccc-CcEEEe
Q 015523 87 GGMPG-SVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT-F---WAVK-SNIHVS 160 (405)
Q Consensus 87 gg~~~-~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~-~---~~~~-~~~v~d 160 (405)
||... ...+..++.+++||+++++++++|++||+| .++|+++|+|+|+++|+||...+.|++ + .+.+ +.+|+|
T Consensus 82 Gg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G-~~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~~v~D 160 (209)
T 3er6_A 82 SIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTG-IFVVAKAGLLQQNKAVMHSYFAHLFGELFPEIMLMTEQKALID 160 (209)
T ss_dssp CCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTH-HHHHHHHTCCSSCEECCCHHHHHHHHHHCTTSEECTTCSEEEE
T ss_pred CCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHH-HHHHHHcCCCCCCeeEECHHHHHHHHHHCCCcEEecCCEEEEe
Confidence 99522 222367899999999999999999999996 568999999999999999998888876 3 4444 469999
Q ss_pred CCeEcCCCcccHHHHHHHHHHHhcChHHHHHHHHhcccccccC
Q 015523 161 GEVTTSRGPGTSFEFALCLVEQLFGESVAKEIGELLLMHNADN 203 (405)
Q Consensus 161 g~iiT~~g~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~ 203 (405)
||+|||+|+.+++||++++|+++.|++.|+++++.|++++...
T Consensus 161 g~iiTs~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~~~~ 203 (209)
T 3er6_A 161 GNVYLSSGPYSHSSVMLEIVEEYFGKHTRNLGNQFLSTIESEG 203 (209)
T ss_dssp TTEEEECCSSCCHHHHHHHHHHHHCHHHHHHHHHHTTC-----
T ss_pred CCEEECCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhccCcccc
Confidence 9999999999999999999999999999999999999988665
No 23
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=100.00 E-value=1.8e-36 Score=261.66 Aligned_cols=167 Identities=20% Similarity=0.234 Sum_probs=156.9
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
.+++|.||+.+||++.|+..|+++|+++|++++++|++++ ++++++|.++.+|..++++++.+||+|+||||+ ++..+
T Consensus 7 t~~~v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~~-~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~-g~~~l 84 (177)
T 4hcj_A 7 TNNILYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFIG-TAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGI-GCITL 84 (177)
T ss_dssp CCEEEEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSSE-EEEETTSCEEEECEEGGGCCGGGCSEEEECCSG-GGGGG
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-eEeeCCCCEEecCccHHHCCHhHCCEEEECCCc-cHHHH
Confidence 4567889999999999999999999999999999999998 999999999999999999998899999999994 67778
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--CccccCcEEEeCCeEcCCCcccHH
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVKSNIHVSGEVTTSRGPGTSF 173 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiT~~g~~~~~ 173 (405)
..++.+.+||+++++++|+|++||+|+. +|+++|+|+||++|+||...+.+++ ..+.++++|+|||+|||+|+.++.
T Consensus 85 ~~~~~~~~~l~~~~~~~k~iaaIC~g~~-~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~vV~Dg~liTs~g~~~~~ 163 (177)
T 4hcj_A 85 WDDWRTQGLAKLFLDNQKIVAGIGSGVV-IMANAKILEEINVTCLSADESHVRHGNANIMSENVVVSGNIVTANGPTSSK 163 (177)
T ss_dssp TTCHHHHHHHHHHHHTTCEEEEETTHHH-HHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGGHH
T ss_pred hhCHHHHHHHHHHHHhCCEEEEecccHH-HHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCCEEEECCEEECCCHHHHH
Confidence 8999999999999999999999999765 8999999999999999999988887 688899999999999999999999
Q ss_pred HHHHHHHHHhcC
Q 015523 174 EFALCLVEQLFG 185 (405)
Q Consensus 174 ~~~l~ii~~~~g 185 (405)
+|++++|+.+.+
T Consensus 164 ~~a~~lve~L~s 175 (177)
T 4hcj_A 164 DFANAVVGVLNS 175 (177)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999999865
No 24
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=100.00 E-value=1.5e-35 Score=267.54 Aligned_cols=180 Identities=20% Similarity=0.363 Sum_probs=165.8
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCC--CeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAK--VDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~--~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
+++||+|+++|||.+.|+..++++|+.++ |+++++| +++ ++.++.|+.+.++..+++. .+||+|+||||..+..
T Consensus 19 ~~~kV~ill~dGf~~~e~~~p~dvl~~~~~~~~v~~vs-~~~-~V~ss~G~~v~~d~~l~~~--~~~D~liVPGG~~g~~ 94 (236)
T 3bhn_A 19 GMYKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILG-TKP-EHHSQLGMTVKTDGHVSEV--KEQDVVLITSGYRGIP 94 (236)
T ss_dssp -CEEEEEECCTTBCHHHHHHHHHHHTTCSSSEEEEEEE-SSS-EEEBTTCCEEECSEEGGGG--GGCSEEEECCCTTHHH
T ss_pred CCCEEEEEeCCCChHHHHHHHHHHHHcCCCCEEEEEEE-CCC-cEEecCCcEEecCcccccc--cCCCEEEEcCCccCHh
Confidence 46899999999999999999999999976 8999999 887 9999999999999999885 7899999999943455
Q ss_pred hhhcChHHHHHHHHHhhcCC-EEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCCcEEEcCCeEecCChhh
Q 015523 297 RLQKSRILKKLLKEQKVAGR-IYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGTKVVVDGKVITSRGLAN 373 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~~~~k-~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiTa~g~~~ 373 (405)
.+..++.+++|| ++.+++ +|++||+|+++|+++|||+||++|+||...+.|++ ..+.++.+|.|||+|||+|+.+
T Consensus 95 ~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~~vV~Dg~iiTs~G~~a 172 (236)
T 3bhn_A 95 AALQDENFMSAL--KLDPSRQLIGSICAGSFVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDLPLVIEGNIATAGGCLS 172 (236)
T ss_dssp HHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGG
T ss_pred hhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHHcCCCCCCEEECCHHHHHHHHHhCCccCCCcEEEeCCEEECCCHHH
Confidence 677899999999 666677 99999999999999999999999999999999986 4668899999999999999999
Q ss_pred HHHHHHHHHHHccCHHHHHHHHhhcccccCC
Q 015523 374 VIDFALAIVSKFFGHARTRSVAEGLVFEYPR 404 (405)
Q Consensus 374 ~~~~~l~~i~~l~g~~~a~~v~~~l~~~~~r 404 (405)
++||++++|+++.|++.|+++++.|++++.|
T Consensus 173 ~~dlal~lIe~l~G~~~A~~va~~l~~~~~~ 203 (236)
T 3bhn_A 173 LLYLVGWLAERLFDSVKRKQIQNQLIPAGQM 203 (236)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHTTTSCTTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHhcccCCCC
Confidence 9999999999999999999999999999875
No 25
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-35 Score=265.05 Aligned_cols=180 Identities=19% Similarity=0.291 Sum_probs=165.3
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHH--------hCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCC
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILR--------RAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGG 291 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~--------~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG 291 (405)
|+||+|+++|||++.|+..++++|+ +.+|+++++|++++ +++++.|+++.+|..++++++.+||+|+||||
T Consensus 5 m~~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~-~v~~~~G~~i~~d~~~~~~~~~~~D~livpGG 83 (212)
T 3efe_A 5 TKKAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKE-MITTMGGLRIKPDISLDECTLESKDLLILPGG 83 (212)
T ss_dssp CCCEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSC-CEECTTCCEECCSEEGGGCCCCTTCEEEECCC
T ss_pred ccEEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCC-eEEcCCCCEEecCcCHHHCCccCCCEEEECCC
Confidence 6899999999999999999999999 67899999999998 99999999999999999997779999999999
Q ss_pred ccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCc-chhhhhhc-----CcccCCcEEEcCCe
Q 015523 292 VAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHP-SVIGKLTN-----EVVNGTKVVVDGKV 365 (405)
Q Consensus 292 ~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~-~~~~~l~~-----~~~~~~~~v~dg~i 365 (405)
.. ..+..++.+++||+++++++|+|++||+|+++|+++|||+||++|+|| ...+.|++ ..+.++.+|+|||+
T Consensus 84 ~~--~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~~~~~~~~~~V~Dg~i 161 (212)
T 3efe_A 84 TT--WSEEIHQPILERIGQALKIGTIVAAICGATDALANMGYLDTRKHTSNNLEYTKMVCPNYKGEKFYELGPAVSDANL 161 (212)
T ss_dssp SC--TTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHHTTTTSSSCBCCSCHHHHHHHCTTCCCTTTBCCCSEEEETTE
T ss_pred Cc--cccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHHcCCCCCCeeecCCHHHHHHHHhhCCCccccCCCcEEEECCE
Confidence 63 235688999999999999999999999999999999999999999996 67666653 35788999999999
Q ss_pred EecCChhhHHHHHHHHHHHccCHHHHHHHHhhcccccCC
Q 015523 366 ITSRGLANVIDFALAIVSKFFGHARTRSVAEGLVFEYPR 404 (405)
Q Consensus 366 iTa~g~~~~~~~~l~~i~~l~g~~~a~~v~~~l~~~~~r 404 (405)
|||+|+. ++||++++|+++.|. .|+.|++.+.+.+.+
T Consensus 162 iTs~G~~-~~d~al~li~~l~g~-~a~~va~~~~~~~~g 198 (212)
T 3efe_A 162 VTASGIA-PLEFAMEVLKKIDVF-TLDALHSWYNLNKTH 198 (212)
T ss_dssp EEECTTC-HHHHHHHHHHHHTCS-CHHHHHHHHHHHHHC
T ss_pred EECCCch-HHHHHHHHHHHhcCC-CHHHHHHHHHHHcCC
Confidence 9999996 899999999999997 999999999987654
No 26
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=100.00 E-value=6.7e-35 Score=251.34 Aligned_cols=164 Identities=21% Similarity=0.367 Sum_probs=155.0
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQ 299 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~ 299 (405)
.|||+|+++|||++.|+..++++|+.+||+++++|++++ ++.++.|+.+.++..++++++.+||+|+||||. +...+.
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~~~ 79 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRG-KITGKHGYSVNVDLTFEEVDPDEFDALVLPGGK-APEIVR 79 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSE-EEECTTSCEEEECEEGGGCCGGGCSEEEECCBS-HHHHHT
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-EEecCCCcEEeccCChhHCCHhhCCEEEECCCc-CHHHhc
Confidence 479999999999999999999999999999999999998 999999999999999999877789999999997 556677
Q ss_pred cChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCCcEEEcCCeEecCChhhHHHH
Q 015523 300 KSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGTKVVVDGKVITSRGLANVIDF 377 (405)
Q Consensus 300 ~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiTa~g~~~~~~~ 377 (405)
.++.+++||+++++++|+|+++|+|+++|+++|+|+||++|+||...+.|++ ..+.++.+|.|||+|||+|+.++.+|
T Consensus 80 ~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~d~ 159 (168)
T 3l18_A 80 LNEKAVMITRRMFEDDKPVASICHGPQILISAKVLKGRRGTSTITIRDDVINAGAEWIDAEVVVDGNWVSSRHPGDLYAW 159 (168)
T ss_dssp TCHHHHHHHHHHHHTTCCEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGHHHH
T ss_pred cCHHHHHHHHHHHHCCCEEEEECHhHHHHHHCCccCCCEEEeCccHHHHHHhCCCEEecCCEEEeCCEEEcCCHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999987 45678899999999999999999999
Q ss_pred HHHHHHHc
Q 015523 378 ALAIVSKF 385 (405)
Q Consensus 378 ~l~~i~~l 385 (405)
++++|+++
T Consensus 160 ~l~li~~l 167 (168)
T 3l18_A 160 MREFVKLL 167 (168)
T ss_dssp HHHHGGGC
T ss_pred HHHHHHhh
Confidence 99999986
No 27
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=100.00 E-value=4.7e-35 Score=261.48 Aligned_cols=182 Identities=16% Similarity=0.222 Sum_probs=164.4
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHH--------hcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcC
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLR--------RAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPG 87 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~--------~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipg 87 (405)
+|+||+|+++|||++.|+..+.++|+ +.+|+++++|++++ ++++++|+++.+|..++++++.+||+|+|||
T Consensus 4 ~m~~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~-~v~~~~G~~i~~d~~~~~~~~~~~D~livpG 82 (212)
T 3efe_A 4 QTKKAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKE-MITTMGGLRIKPDISLDECTLESKDLLILPG 82 (212)
T ss_dssp -CCCEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSC-CEECTTCCEECCSEEGGGCCCCTTCEEEECC
T ss_pred cccEEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCC-eEEcCCCCEEecCcCHHHCCccCCCEEEECC
Confidence 47799999999999999999999999 67899999999998 9999999999999999999878899999999
Q ss_pred CchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeecc-CccccCCC-C----ccccCcEEEeC
Q 015523 88 GMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHP-AFTDKLPT-F----WAVKSNIHVSG 161 (405)
Q Consensus 88 g~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~-~~~~~l~~-~----~~~~~~~v~dg 161 (405)
|. .. .+..++.+++||+++++++++|+++|+| .++|+++|+|+|+++|+|| .+.+.|++ + .+.++++|+||
T Consensus 83 G~-~~-~~~~~~~l~~~l~~~~~~gk~iaaiC~G-~~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~~~~~~~~~~V~Dg 159 (212)
T 3efe_A 83 GT-TW-SEEIHQPILERIGQALKIGTIVAAICGA-TDALANMGYLDTRKHTSNNLEYTKMVCPNYKGEKFYELGPAVSDA 159 (212)
T ss_dssp CS-CT-TSGGGHHHHHHHHHHHHHTCEEEEETHH-HHHHHHTTTTSSSCBCCSCHHHHHHHCTTCCCTTTBCCCSEEEET
T ss_pred CC-cc-ccccCHHHHHHHHHHHHCCCEEEEEcHH-HHHHHHcCCCCCCeeecCCHHHHHHHHhhCCCccccCCCcEEEEC
Confidence 94 33 3567899999999999999999999996 5589999999999999996 67666665 3 45678999999
Q ss_pred CeEcCCCcccHHHHHHHHHHHhcChHHHHHHHHhcccccccC
Q 015523 162 EVTTSRGPGTSFEFALCLVEQLFGESVAKEIGELLLMHNADN 203 (405)
Q Consensus 162 ~iiT~~g~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~ 203 (405)
|+|||+|+. ++||++++|+++.|. .++++++.+.+.+...
T Consensus 160 ~iiTs~G~~-~~d~al~li~~l~g~-~a~~va~~~~~~~~g~ 199 (212)
T 3efe_A 160 NLVTASGIA-PLEFAMEVLKKIDVF-TLDALHSWYNLNKTHK 199 (212)
T ss_dssp TEEEECTTC-HHHHHHHHHHHHTCS-CHHHHHHHHHHHHHCC
T ss_pred CEEECCCch-HHHHHHHHHHHhcCC-CHHHHHHHHHHHcCCC
Confidence 999999985 999999999999997 9999999999997776
No 28
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=100.00 E-value=9.3e-35 Score=262.43 Aligned_cols=183 Identities=20% Similarity=0.236 Sum_probs=164.1
Q ss_pred CCCCcEEEEEecCCCchhhHHHHHHHHHhcC--CEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchh
Q 015523 14 PSFALNVLVPVGFGTEEMEAVIIVDVLRRAG--AQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPG 91 (405)
Q Consensus 14 ~~~~~ki~ill~~g~~~~e~~~~~~~l~~~~--~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~ 91 (405)
+.+++||+||++|||+..|+..++++|+.++ |++++++ +++ ++++++|+.+.+|..+++. .+||+|+||||+.+
T Consensus 17 ~~~~~kV~ill~dGf~~~e~~~p~dvl~~~~~~~~v~~vs-~~~-~V~ss~G~~v~~d~~l~~~--~~~D~liVPGG~~g 92 (236)
T 3bhn_A 17 FQGMYKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILG-TKP-EHHSQLGMTVKTDGHVSEV--KEQDVVLITSGYRG 92 (236)
T ss_dssp ---CEEEEEECCTTBCHHHHHHHHHHHTTCSSSEEEEEEE-SSS-EEEBTTCCEEECSEEGGGG--GGCSEEEECCCTTH
T ss_pred cCCCCEEEEEeCCCChHHHHHHHHHHHHcCCCCEEEEEEE-CCC-cEEecCCcEEecCcccccc--cCCCEEEEcCCccC
Confidence 4467899999999999999999999999876 8999999 887 9999999999999999874 48999999999434
Q ss_pred hhccccChHHHHHHHHHHHcCC-EEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--CccccCcEEEeCCeEcCCC
Q 015523 92 SVRLRDCEILKKITSKQAEEKR-LYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVKSNIHVSGEVTTSRG 168 (405)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~~~~-~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiT~~g 168 (405)
...+..++.+++|| ++++++ +|+++|+| .++|+++|+|+|+++|+||...+.|++ ..+.++.+|+|||+|||+|
T Consensus 93 ~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G-~~lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~~vV~Dg~iiTs~G 169 (236)
T 3bhn_A 93 IPAALQDENFMSAL--KLDPSRQLIGSICAG-SFVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDLPLVIEGNIATAGG 169 (236)
T ss_dssp HHHHHTCHHHHHHC--CCCTTTCEEEEETTH-HHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECS
T ss_pred HhhhccCHHHHHHH--HhCCCCCEEEEEcHH-HHHHHHcCCCCCCEEECCHHHHHHHHHhCCccCCCcEEEeCCEEECCC
Confidence 55577899999999 677777 99999996 458999999999999999999999987 3457788999999999999
Q ss_pred cccHHHHHHHHHHHhcChHHHHHHHHhcccccccC
Q 015523 169 PGTSFEFALCLVEQLFGESVAKEIGELLLMHNADN 203 (405)
Q Consensus 169 ~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~ 203 (405)
+.+++||++++|+++.|++.|+++++.|++++.++
T Consensus 170 ~~a~~dlal~lIe~l~G~~~A~~va~~l~~~~~~~ 204 (236)
T 3bhn_A 170 CLSLLYLVGWLAERLFDSVKRKQIQNQLIPAGQME 204 (236)
T ss_dssp GGGHHHHHHHHHHHHSCHHHHHHHHTTTSCTTCHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHhcccCCCCc
Confidence 99999999999999999999999999999998877
No 29
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=100.00 E-value=1.4e-34 Score=254.48 Aligned_cols=173 Identities=27% Similarity=0.366 Sum_probs=157.8
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeec-----CCCcEEeeCCCccCcCCCCccEEEEcCCcc
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVA-----SQGVKIIADKSISDAAESVYDLIILPGGVA 293 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~-----~~g~~v~~~~~l~~~~~~~~D~livpgG~~ 293 (405)
+++||+|+++|||++.|+..++++|+.+||+++++|++++ ++.+ +.|+++.++..++++++.+||+|+||||..
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~ 86 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPG-EIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTV 86 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSS-EEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCC-ccccccccccCCcEEeCCCChhhCChhhCCEEEECCCch
Confidence 3589999999999999999999999999999999999998 8887 779999999999998777899999999974
Q ss_pred chHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCCcEEEcCCeEecCCh
Q 015523 294 GAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGTKVVVDGKVITSRGL 371 (405)
Q Consensus 294 ~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiTa~g~ 371 (405)
....+..++.+++||+++++++|+|+++|+|+++|+++|||+||++|+||...+.|++ ..+.+..+++|||+|||+|+
T Consensus 87 ~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~~~~v~Dg~iiTs~g~ 166 (190)
T 2vrn_A 87 NPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSETGIAQGLKMTSWSSLKRELTLAGAQWVDEECVTDKGVVTSRKP 166 (190)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSCEEETTEEECSSG
T ss_pred hHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHhCcccCCcEEecCccHHHHHHHcCCeEECCCEEEcCCEEEcCCh
Confidence 5666778999999999999999999999999999999999999999999999999886 45666677889999999999
Q ss_pred hhHHHHHHHHHHHc-cCHHHHH
Q 015523 372 ANVIDFALAIVSKF-FGHARTR 392 (405)
Q Consensus 372 ~~~~~~~l~~i~~l-~g~~~a~ 392 (405)
.++.+|++++++++ .|++.|+
T Consensus 167 ~s~~~~~l~li~~l~~g~~~a~ 188 (190)
T 2vrn_A 167 DDLPAFNKKIVEEFAEGDHSSR 188 (190)
T ss_dssp GGHHHHHHHHHHHHHHCCCGGG
T ss_pred hhHHHHHHHHHHHHhccccccc
Confidence 99999999999999 8877654
No 30
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=100.00 E-value=1.4e-34 Score=249.42 Aligned_cols=165 Identities=22% Similarity=0.332 Sum_probs=153.0
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
++|||+|+++|||+..|+..+.++|++++|+++++|++++ ++++++|+.+.++..++++++.+||+|+||||+ +...+
T Consensus 1 ~~~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~~ 78 (168)
T 3l18_A 1 ASMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRG-KITGKHGYSVNVDLTFEEVDPDEFDALVLPGGK-APEIV 78 (168)
T ss_dssp CCCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSE-EEECTTSCEEEECEEGGGCCGGGCSEEEECCBS-HHHHH
T ss_pred CCcEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-EEecCCCcEEeccCChhHCCHhhCCEEEECCCc-CHHHh
Confidence 3579999999999999999999999999999999999997 999999999999999999987789999999995 55667
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--CccccCcEEEeCCeEcCCCcccHH
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVKSNIHVSGEVTTSRGPGTSF 173 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiT~~g~~~~~ 173 (405)
..++.+.+||+++++++++|+++|+| .++|+++|+|+|+++|+||...+.|++ ..++++.+|+|||+|||+|+.++.
T Consensus 79 ~~~~~l~~~l~~~~~~~k~i~aiC~G-~~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~ 157 (168)
T 3l18_A 79 RLNEKAVMITRRMFEDDKPVASICHG-PQILISAKVLKGRRGTSTITIRDDVINAGAEWIDAEVVVDGNWVSSRHPGDLY 157 (168)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEETTT-HHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECHh-HHHHHHCCccCCCEEEeCccHHHHHHhCCCEEecCCEEEeCCEEEcCCHHHHH
Confidence 78999999999999999999999996 558999999999999999999998887 456788899999999999999999
Q ss_pred HHHHHHHHHh
Q 015523 174 EFALCLVEQL 183 (405)
Q Consensus 174 ~~~l~ii~~~ 183 (405)
||++++|+++
T Consensus 158 d~~l~li~~l 167 (168)
T 3l18_A 158 AWMREFVKLL 167 (168)
T ss_dssp HHHHHHGGGC
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 31
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=100.00 E-value=2.1e-34 Score=253.35 Aligned_cols=174 Identities=22% Similarity=0.290 Sum_probs=157.2
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEe-----ccCcEEecCcccCCCCCCcccEEEEcCCc
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEA-----SSGTRLVADTSISNCSHQVFDLIALPGGM 89 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~-----~~g~~v~~~~~~~~~~~~~~d~liipgg~ 89 (405)
++++||+||++|||+..|+..+.++|++++|++++++++++ ++++ ++|+.+.++..++++++.+||+||||||.
T Consensus 7 ~~~~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~ 85 (190)
T 2vrn_A 7 LTGKKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPG-EIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGT 85 (190)
T ss_dssp CTTCEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSS-EEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCT
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCC-ccccccccccCCcEEeCCCChhhCChhhCCEEEECCCc
Confidence 45689999999999999999999999999999999999998 8988 78999999999998876789999999995
Q ss_pred hhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--CccccCcEEEeCCeEcCC
Q 015523 90 PGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVKSNIHVSGEVTTSR 167 (405)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiT~~ 167 (405)
.....+..++.+++||+++++++++|+++|+|+ ++|+++|+|+|+++|+||...+.|++ ..+.++++++|||+|||+
T Consensus 86 ~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~-~~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~~~~v~Dg~iiTs~ 164 (190)
T 2vrn_A 86 VNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGP-WSLSETGIAQGLKMTSWSSLKRELTLAGAQWVDEECVTDKGVVTSR 164 (190)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTT-HHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSCEEETTEEECS
T ss_pred hhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhH-HHHHhCcccCCcEEecCccHHHHHHHcCCeEECCCEEEcCCEEEcC
Confidence 455667789999999999999999999999965 58999999999999999999888877 566777778899999999
Q ss_pred CcccHHHHHHHHHHHh-cChHHHH
Q 015523 168 GPGTSFEFALCLVEQL-FGESVAK 190 (405)
Q Consensus 168 g~~~~~~~~l~ii~~~-~g~~~a~ 190 (405)
|+.++.+|++++|+++ .|++.|+
T Consensus 165 g~~s~~~~~l~li~~l~~g~~~a~ 188 (190)
T 2vrn_A 165 KPDDLPAFNKKIVEEFAEGDHSSR 188 (190)
T ss_dssp SGGGHHHHHHHHHHHHHHCCCGGG
T ss_pred ChhhHHHHHHHHHHHHhccccccc
Confidence 9999999999999999 8887654
No 32
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=3.1e-34 Score=272.87 Aligned_cols=178 Identities=25% Similarity=0.405 Sum_probs=165.4
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCce-eecCCCc-EEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQ-IVASQGV-KIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~-v~~~~g~-~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
+|+||+|+++|||.+.|+..|+++|+.+||+++++|++++ + +.++.|+ ++.++..++++++.+||+|+||||. +..
T Consensus 9 ~mkkV~ILl~dgf~~~El~~p~dvL~~Ag~~v~vvS~~~g-~~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~-g~~ 86 (365)
T 3fse_A 9 GKKKVAILIEQAVEDTEFIIPCNGLKQAGFEVVVLGSRMN-EKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGM-APD 86 (365)
T ss_dssp --CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSS-CCEECTTSCCEECCSEETTTCCGGGCSEEEECCBT-HHH
T ss_pred CceEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEECCCC-ceeecCCCceEEeCCCCHhhCCCcCCCEEEEECCc-chh
Confidence 5789999999999999999999999999999999999998 7 9999999 9999999999877789999999997 566
Q ss_pred hhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCCcEEEcCCeEecCChhhH
Q 015523 297 RLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGTKVVVDGKVITSRGLANV 374 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiTa~g~~~~ 374 (405)
.+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.|++ ..+.++.+|.|||+|||+|+.++
T Consensus 87 ~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~~vV~DGniITs~G~~a~ 166 (365)
T 3fse_A 87 KMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIEGDLLRGKQATGFIAISKDMMNAGADYLDEALVVDGNLITSREPGDL 166 (365)
T ss_dssp HHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGH
T ss_pred hccCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecCcEEEECCEEECCCHHHH
Confidence 6788999999999999999999999999999999999999999999999999986 56778899999999999999999
Q ss_pred HHHHHHHHHHccCHHHHHHHHhhc
Q 015523 375 IDFALAIVSKFFGHARTRSVAEGL 398 (405)
Q Consensus 375 ~~~~l~~i~~l~g~~~a~~v~~~l 398 (405)
.+|++++|+++.|.+.|+++++..
T Consensus 167 ~d~al~lIe~L~g~~~A~~lA~~~ 190 (365)
T 3fse_A 167 AIFTTAILSRLGYGGKDAALPDEK 190 (365)
T ss_dssp HHHHHHHHHHTTCCCSSSCCCCTT
T ss_pred HHHHHHHHHHhcCchHHHHHhhhh
Confidence 999999999999998888877654
No 33
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=100.00 E-value=5.6e-34 Score=250.07 Aligned_cols=177 Identities=21% Similarity=0.283 Sum_probs=159.6
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHh-CCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRR-AKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERL 298 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~-~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~ 298 (405)
|+||+|+++|||++.|+..+++.|++ .+|+++++|++++ +++++.|+.+.++..++++++.+||+|+||||.. ...
T Consensus 1 m~~i~ill~~g~~~~e~~~~~~~l~~a~~~~v~~vs~~~~-~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~--~~~ 77 (188)
T 2fex_A 1 MTRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGM-PVTSMGGLKVTPDTSYDALDPVDIDALVIPGGLS--WEK 77 (188)
T ss_dssp CCEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSS-CEECTTCCEEECSEEGGGCCTTTCSEEEECCBSH--HHH
T ss_pred CcEEEEEeCCCchHHHHHHHHHHHhhcCCceEEEEeCCCC-ceeeCCCcEEeccccHHHCCcccCCEEEECCCCc--ccc
Confidence 57999999999999999999999999 9999999999998 9999999999999999998767999999999963 334
Q ss_pred hcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc-----CcccCCc-EEEcCCeEecCChh
Q 015523 299 QKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN-----EVVNGTK-VVVDGKVITSRGLA 372 (405)
Q Consensus 299 ~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~-----~~~~~~~-~v~dg~iiTa~g~~ 372 (405)
..++.+++||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++ ..+.++. +|.|||+|||+|+.
T Consensus 78 ~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~~ 157 (188)
T 2fex_A 78 GTAADLGGLVKRFRDRDRLVAGICAAASALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQPRAVSDGGVVTAAGSA 157 (188)
T ss_dssp TCCCCCHHHHHHHHHTTCEEEEETHHHHHHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCSSCEEETTEEEECTTC
T ss_pred cccHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCCCEEEECCEEECCCcc
Confidence 67899999999999999999999999999999999999999999986665443 2567788 99999999999996
Q ss_pred hHHHHHHHHHHHccCHHHHHHHHhhccccc
Q 015523 373 NVIDFALAIVSKFFGHARTRSVAEGLVFEY 402 (405)
Q Consensus 373 ~~~~~~l~~i~~l~g~~~a~~v~~~l~~~~ 402 (405)
++||++++|+++.|.+.++ ++++.+..
T Consensus 158 -~~d~al~lv~~l~~~~~~~--~~~~~~~~ 184 (188)
T 2fex_A 158 -PVSFAVEILKSLGLFGPEA--EAELQIFA 184 (188)
T ss_dssp -HHHHHHHHHHHTTCCSHHH--HHHHGGGG
T ss_pred -HHHHHHHHHHHccCCCHHH--HHHHHHHH
Confidence 7999999999999999887 77766643
No 34
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=3.6e-33 Score=245.72 Aligned_cols=170 Identities=21% Similarity=0.330 Sum_probs=157.2
Q ss_pred cccCCcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCce-eecCCCc-EEeeCCCccCcCCCCccEEEEcCCc
Q 015523 215 WFFDRMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQ-IVASQGV-KIIADKSISDAAESVYDLIILPGGV 292 (405)
Q Consensus 215 ~~~~~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~-v~~~~g~-~v~~~~~l~~~~~~~~D~livpgG~ 292 (405)
+...+++||+|+++|||++.|+..+.++|+++||++++++++++ + +.++.|+ .+.++..++++++.+||+|+||||.
T Consensus 18 ~~~~~~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG~ 96 (193)
T 1oi4_A 18 KKAGLSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAG-KTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGH 96 (193)
T ss_dssp TTTTCCCEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTT-CEEECTTSSCEEECCEEGGGCCGGGCSEEEECCBT
T ss_pred hhhccCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCC-cceecCCCCeEEECCCChHHCCcccCCEEEECCCc
Confidence 34456789999999999999999999999999999999999998 7 9999999 9999999998877789999999995
Q ss_pred cchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccCCcEEEcCC-eEecC
Q 015523 293 AGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNGTKVVVDGK-VITSR 369 (405)
Q Consensus 293 ~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~-iiTa~ 369 (405)
+...+..++.+++||+++++++|+|++||+|+++|+++|+|+||++|+||...+.|++ ..+.++.+|+||| +|||+
T Consensus 97 -~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~~v~Dg~~iiTs~ 175 (193)
T 1oi4_A 97 -SPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSR 175 (193)
T ss_dssp -HHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTTEEEES
T ss_pred -CHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCCEEEECCEEEECC
Confidence 5666778899999999999999999999999999999999999999999999999986 4677788899999 99999
Q ss_pred ChhhHHHHHHHHHHHcc
Q 015523 370 GLANVIDFALAIVSKFF 386 (405)
Q Consensus 370 g~~~~~~~~l~~i~~l~ 386 (405)
|+.++.+|++++|+++.
T Consensus 176 g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 176 TPDDLPAFNREALRLLG 192 (193)
T ss_dssp SGGGHHHHHHHHHHHHC
T ss_pred CcchHHHHHHHHHHHhh
Confidence 99999999999999874
No 35
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=8.5e-34 Score=251.54 Aligned_cols=175 Identities=18% Similarity=0.246 Sum_probs=155.9
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhC-CCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRA-KVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERL 298 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~-~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~ 298 (405)
|+||+|+++|||++.|+..+.+.|.++ +|+++++|++++ ++++.|+++.++..++++ +.+||+|+||||. +...
T Consensus 3 m~kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~~--V~~~~G~~v~~d~~l~~~-~~~~D~livpGG~-~~~~- 77 (206)
T 3f5d_A 3 LKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPI--VSSIGGFKTSVDYIIGLE-PANFNLLVMIGGD-SWSN- 77 (206)
T ss_dssp CEEEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSE--EEBTTSCEEECSEETTSS-CSCCSEEEECCBS-CCCC-
T ss_pred ccEEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCCC--EEecCCcEEecCcChhhC-CcCCCEEEEcCCC-Chhh-
Confidence 689999999999999999999999998 999999999985 999999999999999998 4689999999997 3333
Q ss_pred hcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchh-hhhh----cCcccCCcEEEcCCeEecCChhh
Q 015523 299 QKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVI-GKLT----NEVVNGTKVVVDGKVITSRGLAN 373 (405)
Q Consensus 299 ~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~-~~l~----~~~~~~~~~v~dg~iiTa~g~~~ 373 (405)
.++.+++||+++++++++|++||+|+++|+++|||+||++|+||... ..++ ...+.++++|+|||+|||+|+.
T Consensus 78 -~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aGLL~Gr~aTthw~~~~~~~~~~~~~~~~~~~~~V~Dg~iiTs~G~a- 155 (206)
T 3f5d_A 78 -DNKKLLHFVKTAFQKNIPIAAICGAVDFLAKNGLLNNHSHTGNFVYLWKDYKQYKPISSFVEKQAVRDKNLVTANGTA- 155 (206)
T ss_dssp -CCHHHHHHHHHHHHTTCCEEEETHHHHHHHHTTTTTTSCBCCSCGGGGTTCTTCCCSSCBCCSSEEEETTEEEECTTC-
T ss_pred -cCHHHHHHHHHHHHcCCEEEEECHHHHHHHHcCCCCCCEEEccCHHHhhhhHhhcCCCeEccCCEEEECCEEECCCch-
Confidence 89999999999999999999999999999999999999999998321 1111 2456788999999999999996
Q ss_pred HHHHHHHHHHHccCHHHHHHHHhhccccc
Q 015523 374 VIDFALAIVSKFFGHARTRSVAEGLVFEY 402 (405)
Q Consensus 374 ~~~~~l~~i~~l~g~~~a~~v~~~l~~~~ 402 (405)
++||++++|+++ +.+.|++|++.|.+.+
T Consensus 156 ~id~al~li~~l-~~~~a~~va~~~~~~~ 183 (206)
T 3f5d_A 156 PIEFTNLILEMI-DFDTPENIEKMMYMNR 183 (206)
T ss_dssp HHHHHHHHHHHT-TCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CcchHHHHHHHhhhhh
Confidence 899999999975 5689999999998754
No 36
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=4.2e-34 Score=272.00 Aligned_cols=180 Identities=23% Similarity=0.299 Sum_probs=163.7
Q ss_pred CCCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCce-eEeccCc-EEecCcccCCCCCCcccEEEEcCCchh
Q 015523 14 PSFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLE-VEASSGT-RLVADTSISNCSHQVFDLIALPGGMPG 91 (405)
Q Consensus 14 ~~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~-v~~~~g~-~v~~~~~~~~~~~~~~d~liipgg~~~ 91 (405)
+.+++||+||++|||+..|+..++++|++++|+++++|++++ + +++++|+ .+.+|..++++++.+||+|+||||. +
T Consensus 7 ~~~mkkV~ILl~dgf~~~El~~p~dvL~~Ag~~v~vvS~~~g-~~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~-g 84 (365)
T 3fse_A 7 NSGKKKVAILIEQAVEDTEFIIPCNGLKQAGFEVVVLGSRMN-EKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGM-A 84 (365)
T ss_dssp ----CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSS-CCEECTTSCCEECCSEETTTCCGGGCSEEEECCBT-H
T ss_pred CCCceEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEECCCC-ceeecCCCceEEeCCCCHhhCCCcCCCEEEEECCc-c
Confidence 456789999999999999999999999999999999999998 7 9999999 9999999999987789999999995 5
Q ss_pred hhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--CccccCcEEEeCCeEcCCCc
Q 015523 92 SVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVKSNIHVSGEVTTSRGP 169 (405)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~iiT~~g~ 169 (405)
...+..++.+.+||+++++++++|+++|+| .++|+++|+|+|+++|+||...+.|++ ..+.+.++|+|||+|||+|+
T Consensus 85 ~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G-~~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~~vV~DGniITs~G~ 163 (365)
T 3fse_A 85 PDKMRRNPNTVRFVQEAMEQGKLVAAVCHG-PQVLIEGDLLRGKQATGFIAISKDMMNAGADYLDEALVVDGNLITSREP 163 (365)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCEEEEETTT-HHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSG
T ss_pred hhhccCCHHHHHHHHHHHHCCCEEEEECHH-HHHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecCcEEEECCEEECCCH
Confidence 666778999999999999999999999996 558999999999999999999988886 67778899999999999999
Q ss_pred ccHHHHHHHHHHHhcChHHHHHHHHhc
Q 015523 170 GTSFEFALCLVEQLFGESVAKEIGELL 196 (405)
Q Consensus 170 ~~~~~~~l~ii~~~~g~~~a~~~a~~l 196 (405)
.++.||++++|+++.|.+.|+++|+..
T Consensus 164 ~a~~d~al~lIe~L~g~~~A~~lA~~~ 190 (365)
T 3fse_A 164 GDLAIFTTAILSRLGYGGKDAALPDEK 190 (365)
T ss_dssp GGHHHHHHHHHHHTTCCCSSSCCCCTT
T ss_pred HHHHHHHHHHHHHhcCchHHHHHhhhh
Confidence 999999999999999998888887443
No 37
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=100.00 E-value=5.4e-33 Score=243.76 Aligned_cols=176 Identities=19% Similarity=0.242 Sum_probs=156.2
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHh-cCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRR-AGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~-~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
|+||+|+++|||++.|+..+.++|++ .+|+++++|++++ ++++++|+.+.++..++++++.+||+|+||||. .. ..
T Consensus 1 m~~i~ill~~g~~~~e~~~~~~~l~~a~~~~v~~vs~~~~-~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~-~~-~~ 77 (188)
T 2fex_A 1 MTRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGM-PVTSMGGLKVTPDTSYDALDPVDIDALVIPGGL-SW-EK 77 (188)
T ss_dssp CCEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSS-CEECTTCCEEECSEEGGGCCTTTCSEEEECCBS-HH-HH
T ss_pred CcEEEEEeCCCchHHHHHHHHHHHhhcCCceEEEEeCCCC-ceeeCCCcEEeccccHHHCCcccCCEEEECCCC-cc-cc
Confidence 46999999999999999999999999 9999999999998 999999999999999999887789999999995 22 34
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC-C----ccccCc-EEEeCCeEcCCCc
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT-F----WAVKSN-IHVSGEVTTSRGP 169 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~-~----~~~~~~-~v~dg~iiT~~g~ 169 (405)
..++.+++||+++++++++|+++|+|+ ++|+++|+|+|+++|+||.....+++ + .+.++. +|+|||+|||+|+
T Consensus 78 ~~~~~l~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~ 156 (188)
T 2fex_A 78 GTAADLGGLVKRFRDRDRLVAGICAAA-SALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQPRAVSDGGVVTAAGS 156 (188)
T ss_dssp TCCCCCHHHHHHHHHTTCEEEEETHHH-HHHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCSSCEEETTEEEECTT
T ss_pred cccHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCCCEEEECCEEECCCc
Confidence 578899999999999999999999965 58999999999999999986666655 3 456778 9999999999998
Q ss_pred ccHHHHHHHHHHHhcChHHHHHHHHhcccc
Q 015523 170 GTSFEFALCLVEQLFGESVAKEIGELLLMH 199 (405)
Q Consensus 170 ~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~ 199 (405)
. ++||++++|+++.|.+.++ ++.+.+-
T Consensus 157 ~-~~d~al~lv~~l~~~~~~~--~~~~~~~ 183 (188)
T 2fex_A 157 A-PVSFAVEILKSLGLFGPEA--EAELQIF 183 (188)
T ss_dssp C-HHHHHHHHHHHTTCCSHHH--HHHHGGG
T ss_pred c-HHHHHHHHHHHccCCCHHH--HHHHHHH
Confidence 6 8999999999999999886 6555443
No 38
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=8.4e-33 Score=245.14 Aligned_cols=179 Identities=19% Similarity=0.205 Sum_probs=156.8
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhc-CCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRA-GAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~-~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~ 94 (405)
+|+||+|+++|||++.|+..+.++|+++ +|+++++|++++ +++++|+++.+|..+++++ .+||+|+||||. +...
T Consensus 2 ~m~kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~~--V~~~~G~~v~~d~~l~~~~-~~~D~livpGG~-~~~~ 77 (206)
T 3f5d_A 2 SLKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPI--VSSIGGFKTSVDYIIGLEP-ANFNLLVMIGGD-SWSN 77 (206)
T ss_dssp -CEEEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSE--EEBTTSCEEECSEETTSSC-SCCSEEEECCBS-CCCC
T ss_pred CccEEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCCC--EEecCCcEEecCcChhhCC-cCCCEEEEcCCC-Chhh
Confidence 3679999999999999999999999998 999999999985 9999999999999999884 689999999995 4443
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCcc-ccCCC----CccccCcEEEeCCeEcCCCc
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFT-DKLPT----FWAVKSNIHVSGEVTTSRGP 169 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~-~~l~~----~~~~~~~~v~dg~iiT~~g~ 169 (405)
.++.+++||+++++++++|+++|+|+ ++|+++|+|+|+++||||... ..+.. ..+.++++|+|||+|||+|+
T Consensus 78 --~~~~l~~~l~~~~~~gk~iaaiC~G~-~~La~aGLL~Gr~aTthw~~~~~~~~~~~~~~~~~~~~~V~Dg~iiTs~G~ 154 (206)
T 3f5d_A 78 --DNKKLLHFVKTAFQKNIPIAAICGAV-DFLAKNGLLNNHSHTGNFVYLWKDYKQYKPISSFVEKQAVRDKNLVTANGT 154 (206)
T ss_dssp --CCHHHHHHHHHHHHTTCCEEEETHHH-HHHHHTTTTTTSCBCCSCGGGGTTCTTCCCSSCBCCSSEEEETTEEEECTT
T ss_pred --cCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHcCCCCCCEEEccCHHHhhhhHhhcCCCeEccCCEEEECCEEECCCc
Confidence 88999999999999999999999964 589999999999999999421 11211 45678899999999999998
Q ss_pred ccHHHHHHHHHHHhcChHHHHHHHHhcccccccC
Q 015523 170 GTSFEFALCLVEQLFGESVAKEIGELLLMHNADN 203 (405)
Q Consensus 170 ~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~ 203 (405)
. ++||++++|+++ +.+.|+++++.|.+.+...
T Consensus 155 a-~id~al~li~~l-~~~~a~~va~~~~~~~~g~ 186 (206)
T 3f5d_A 155 A-PIEFTNLILEMI-DFDTPENIEKMMYMNRYGF 186 (206)
T ss_dssp C-HHHHHHHHHHHT-TCSCHHHHHHHHHHHHHCH
T ss_pred h-HHHHHHHHHHHh-CcchHHHHHHHhhhhhccc
Confidence 6 999999999975 5789999999999987655
No 39
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=1.1e-32 Score=242.62 Aligned_cols=167 Identities=21% Similarity=0.250 Sum_probs=153.7
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCce-eEeccCc-EEecCcccCCCCCCcccEEEEcCCchhh
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLE-VEASSGT-RLVADTSISNCSHQVFDLIALPGGMPGS 92 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~-v~~~~g~-~v~~~~~~~~~~~~~~d~liipgg~~~~ 92 (405)
++++||+||++|||+..|+..+.++|+++++++++++++++ + +++++|+ .+.++..+++.++.+||+|+|||| .+.
T Consensus 21 ~~~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG-~~~ 98 (193)
T 1oi4_A 21 GLSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAG-KTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGG-HSP 98 (193)
T ss_dssp TCCCEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTT-CEEECTTSSCEEECCEEGGGCCGGGCSEEEECCB-THH
T ss_pred ccCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCC-cceecCCCCeEEECCCChHHCCcccCCEEEECCC-cCH
Confidence 35679999999999999999999999999999999999998 7 9999999 999999999887678999999999 456
Q ss_pred hccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC--CccccCcEEEeCC-eEcCCCc
Q 015523 93 VRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT--FWAVKSNIHVSGE-VTTSRGP 169 (405)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~--~~~~~~~~v~dg~-iiT~~g~ 169 (405)
..+..++.+.+||+++++++++|+++|+| .++|+++|+|+|+++|+||...+.|++ ..+.++++|+||| +|||+|+
T Consensus 99 ~~l~~~~~l~~~l~~~~~~gk~i~aIC~G-~~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~~v~Dg~~iiTs~g~ 177 (193)
T 1oi4_A 99 DYLRGDNRFVTFTRDFVNSGKPVFAICHG-PQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTP 177 (193)
T ss_dssp HHHTTSHHHHHHHHHHHHTTCCEEEETTT-HHHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTTEEEESSG
T ss_pred HHhhhCHHHHHHHHHHHHcCCEEEEECHH-HHHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCCEEEECCEEEECCCc
Confidence 66777899999999999999999999996 558999999999999999999888876 6777888999999 9999999
Q ss_pred ccHHHHHHHHHHHhc
Q 015523 170 GTSFEFALCLVEQLF 184 (405)
Q Consensus 170 ~~~~~~~l~ii~~~~ 184 (405)
.++.||++++|+++.
T Consensus 178 ~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 178 DDLPAFNREALRLLG 192 (193)
T ss_dssp GGHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHhh
Confidence 999999999999874
No 40
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.98 E-value=4.3e-32 Score=235.31 Aligned_cols=160 Identities=19% Similarity=0.328 Sum_probs=146.1
Q ss_pred cCEEEEEeCC---C---CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCc--CCCCccEEEEcCC
Q 015523 220 MPRVLIPIAN---G---SEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDA--AESVYDLIILPGG 291 (405)
Q Consensus 220 ~~~V~il~~~---g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~--~~~~~D~livpgG 291 (405)
++||+|+++| | |++.|+.. +.+|+++++|++++.+++++.|+++.++..++++ ++.+||+|+||||
T Consensus 2 ~~~v~ill~~~~~g~~~~~~~e~~~------~~~~~v~~vs~~~~~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpGG 75 (175)
T 3cne_A 2 AKKVAVLAVNPVNGCGLFQYLEAFF------ENGISYKVFAVSDTKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCG 75 (175)
T ss_dssp CCEEEEEECSSBCHHHHHHHHHHHH------HTTCEEEEEESSSSSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECC
T ss_pred CcEEEEEEecCcCCCccchhhheee------eCCCEEEEEECCCCCceecCCCeEEEeccCHHHhccCcccCCEEEECCC
Confidence 4799999999 9 88888776 6899999999996339999999999999999987 7789999999999
Q ss_pred --ccchHhhh---cChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhcCcccCCcEEEcCCeE
Q 015523 292 --VAGAERLQ---KSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTNEVVNGTKVVVDGKVI 366 (405)
Q Consensus 292 --~~~~~~~~---~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~~~~~~~~~v~dg~ii 366 (405)
..+...+. .++.+++||+++++++|+|++||+|+++|+++|||+||++|+||...+.|++..+.++.+|.|||+|
T Consensus 76 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~G~~~T~~~~~~~~l~~~~~~~~~~v~Dg~ii 155 (175)
T 3cne_A 76 DAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFTGITKGKKVAVHPLAKPAIQNGIATDEKSEIDGNFF 155 (175)
T ss_dssp TTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTTTTTCEEECCGGGGGGCCSSEEESSSEEEETTEE
T ss_pred cCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCEEEeCccHHHHhhcCEEeCCCEEEeCCEE
Confidence 53444455 7889999999999999999999999999999999999999999999999988778899999999999
Q ss_pred ecCChhhHHHHHHHHHHHc
Q 015523 367 TSRGLANVIDFALAIVSKF 385 (405)
Q Consensus 367 Ta~g~~~~~~~~l~~i~~l 385 (405)
||+|+.+++||++++|+++
T Consensus 156 Ts~g~~~~~d~al~li~~l 174 (175)
T 3cne_A 156 TAQDENTIWTMLPKVIEAL 174 (175)
T ss_dssp EESSGGGGGGTHHHHHHHH
T ss_pred eCCChHHHHHHHHHHHHHh
Confidence 9999999999999999986
No 41
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=3.3e-31 Score=229.78 Aligned_cols=160 Identities=21% Similarity=0.270 Sum_probs=143.3
Q ss_pred CcEEEEEecC---C---CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCC--CCCcccEEEEcCC
Q 015523 17 ALNVLVPVGF---G---TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNC--SHQVFDLIALPGG 88 (405)
Q Consensus 17 ~~ki~ill~~---g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~--~~~~~d~liipgg 88 (405)
++||+|+++| | |++.|+.. +++|++++++++++.++++++|+.+.++..+++. ++.+||+|+||||
T Consensus 2 ~~~v~ill~~~~~g~~~~~~~e~~~------~~~~~v~~vs~~~~~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpGG 75 (175)
T 3cne_A 2 AKKVAVLAVNPVNGCGLFQYLEAFF------ENGISYKVFAVSDTKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCG 75 (175)
T ss_dssp CCEEEEEECSSBCHHHHHHHHHHHH------HTTCEEEEEESSSSSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECC
T ss_pred CcEEEEEEecCcCCCccchhhheee------eCCCEEEEEECCCCCceecCCCeEEEeccCHHHhccCcccCCEEEECCC
Confidence 4799999999 9 88877766 6799999999996339999999999999999987 5568999999999
Q ss_pred --chhhhccc---cChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCCCccccCcEEEeCCe
Q 015523 89 --MPGSVRLR---DCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPTFWAVKSNIHVSGEV 163 (405)
Q Consensus 89 --~~~~~~~~---~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~~v~dg~i 163 (405)
+++...+. .++.+++||+++++++++|+++|+|+ ++|+++|+|+|+++|+||...+.|++..+.++.+|+|||+
T Consensus 76 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~-~~La~aGlL~G~~~T~~~~~~~~l~~~~~~~~~~v~Dg~i 154 (175)
T 3cne_A 76 DAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGA-MMFDFTGITKGKKVAVHPLAKPAIQNGIATDEKSEIDGNF 154 (175)
T ss_dssp TTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHH-HHHHHTTTTTTCEEECCGGGGGGCCSSEEESSSEEEETTE
T ss_pred cCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCCEEEeCccHHHHhhcCEEeCCCEEEeCCE
Confidence 54455555 67899999999999999999999965 5899999999999999999999998866778899999999
Q ss_pred EcCCCcccHHHHHHHHHHHh
Q 015523 164 TTSRGPGTSFEFALCLVEQL 183 (405)
Q Consensus 164 iT~~g~~~~~~~~l~ii~~~ 183 (405)
|||+|+.++.||++++|+++
T Consensus 155 iTs~g~~~~~d~al~li~~l 174 (175)
T 3cne_A 155 FTAQDENTIWTMLPKVIEAL 174 (175)
T ss_dssp EEESSGGGGGGTHHHHHHHH
T ss_pred EeCCChHHHHHHHHHHHHHh
Confidence 99999999999999999986
No 42
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.97 E-value=1.1e-31 Score=242.08 Aligned_cols=169 Identities=22% Similarity=0.268 Sum_probs=149.5
Q ss_pred CcCEEEEEeC----------CCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCC--------C-----cEEeeCCCc
Q 015523 219 RMPRVLIPIA----------NGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQ--------G-----VKIIADKSI 275 (405)
Q Consensus 219 ~~~~V~il~~----------~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~--------g-----~~v~~~~~l 275 (405)
+++||+|+++ +||...|+..++++|+++||+++++|++++ ++.+.. | .++.++..+
T Consensus 4 m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~-~v~~~~~~~~~~~~~~~~~~~~i~~~~~l 82 (224)
T 1u9c_A 4 MSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGG-EVPLDPRSINEKDPSWAEAEAALKHTARL 82 (224)
T ss_dssp CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCB-CCCBCGGGSSSCCGGGHHHHHHTTSBEEC
T ss_pred CCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCC-ccccCccccccHHHHHhhhhHhhcCCCCh
Confidence 3479999999 999999999999999999999999999997 776553 3 678889899
Q ss_pred cCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcC------CCCCCeeecCcchhhh-
Q 015523 276 SDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHG------LLKAKKATAHPSVIGK- 348 (405)
Q Consensus 276 ~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aG------lL~g~~~t~~~~~~~~- 348 (405)
+++++.+||+|+||||......+..++.+++||+++++++|+|++||+|+++|+++| ||+||++|+||...+.
T Consensus 83 ~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La~ag~~~g~~lL~Gr~~T~~~~~~~~~ 162 (224)
T 1u9c_A 83 SKDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNATYKDGTPIVKGKTVTSFTDEEERE 162 (224)
T ss_dssp CGGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTSCBTTTTCEECCSCHHHHHH
T ss_pred HHcChhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHHHccccCCCceecCcEEecCCCHHHhh
Confidence 988777999999999975445678899999999999999999999999999999999 9999999999986653
Q ss_pred --------------hhc--CcccCCc-----EEEcCCeEecCChhhHHHHHHHHHHHccCH
Q 015523 349 --------------LTN--EVVNGTK-----VVVDGKVITSRGLANVIDFALAIVSKFFGH 388 (405)
Q Consensus 349 --------------l~~--~~~~~~~-----~v~dg~iiTa~g~~~~~~~~l~~i~~l~g~ 388 (405)
|++ ..+.+.. +|+|||+|||+|+.++++|++++|+++.|+
T Consensus 163 ~~~~~~~p~~~~~~l~~~g~~~~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~ 223 (224)
T 1u9c_A 163 VGLDVHMPFLLESTLRLRGANFVRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEER 223 (224)
T ss_dssp HTCGGGSSSCHHHHHHHTTCEECCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTT
T ss_pred ccccccCCccHHHHHHHcCCEEecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhcc
Confidence 443 3455554 999999999999999999999999999885
No 43
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.97 E-value=5.2e-31 Score=237.69 Aligned_cols=169 Identities=25% Similarity=0.290 Sum_probs=146.6
Q ss_pred CcEEEEEec----------CCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEecc--------C-----cEEecCcccC
Q 015523 17 ALNVLVPVG----------FGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASS--------G-----TRLVADTSIS 73 (405)
Q Consensus 17 ~~ki~ill~----------~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~--------g-----~~v~~~~~~~ 73 (405)
++||+|+++ +||+..|+..++++|++++|+++++|++++ +++++. | ..+.++..++
T Consensus 5 ~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~-~v~~~~~~~~~~~~~~~~~~~~i~~~~~l~ 83 (224)
T 1u9c_A 5 SKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGG-EVPLDPRSINEKDPSWAEAEAALKHTARLS 83 (224)
T ss_dssp CCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCB-CCCBCGGGSSSCCGGGHHHHHHTTSBEECC
T ss_pred CceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCC-ccccCccccccHHHHHhhhhHhhcCCCChH
Confidence 369999999 999999999999999999999999999997 776553 3 5688888898
Q ss_pred CCCCCcccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcC------CCCCcceeeccCcccc-
Q 015523 74 NCSHQVFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWG------LLRRKQITCHPAFTDK- 146 (405)
Q Consensus 74 ~~~~~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ag------ll~g~~~t~~~~~~~~- 146 (405)
++++.+||+|+||||+.....+..++.+.+||+++++++|+|++||+|+. +|+++| +|+|+++|+||...+.
T Consensus 84 ~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~-~La~ag~~~g~~lL~Gr~~T~~~~~~~~~ 162 (224)
T 1u9c_A 84 KDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPS-GLVNATYKDGTPIVKGKTVTSFTDEEERE 162 (224)
T ss_dssp GGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTSCBTTTTCEECCSCHHHHHH
T ss_pred HcChhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHH-HHHHccccCCCceecCcEEecCCCHHHhh
Confidence 88766899999999964344578899999999999999999999999755 899999 9999999999986553
Q ss_pred --------------CCC--CccccCc-----EEEeCCeEcCCCcccHHHHHHHHHHHhcChH
Q 015523 147 --------------LPT--FWAVKSN-----IHVSGEVTTSRGPGTSFEFALCLVEQLFGES 187 (405)
Q Consensus 147 --------------l~~--~~~~~~~-----~v~dg~iiT~~g~~~~~~~~l~ii~~~~g~~ 187 (405)
|++ ..+++.+ +|+|||+|||+|+.++.+|++++|+++.|++
T Consensus 163 ~~~~~~~p~~~~~~l~~~g~~~~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~~ 224 (224)
T 1u9c_A 163 VGLDVHMPFLLESTLRLRGANFVRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEERE 224 (224)
T ss_dssp HTCGGGSSSCHHHHHHHTTCEECCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTTC
T ss_pred ccccccCCccHHHHHHHcCCEEecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhccC
Confidence 333 3455554 9999999999999999999999999998863
No 44
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.96 E-value=6.7e-30 Score=231.81 Aligned_cols=171 Identities=16% Similarity=0.232 Sum_probs=145.5
Q ss_pred cCEEEEEeC------------CCCcHHHHHHHHHHHHhCCCeEEEEeecCCceee---------------------cCCC
Q 015523 220 MPRVLIPIA------------NGSEEIEIVTIVDILRRAKVDVVVASVERSTQIV---------------------ASQG 266 (405)
Q Consensus 220 ~~~V~il~~------------~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~---------------------~~~g 266 (405)
|+||+|++. +||++.|+..|+++|+++|++|+++|++++.++. ++.+
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 82 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFN 82 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSCCCBCTTC--------------------CH
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcCCccccccccCHHHHHHHHHhhHHHH
Confidence 679999986 4899999999999999999999999999873231 1234
Q ss_pred cEEeeCCCccCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc-------CCCCCCee
Q 015523 267 VKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH-------GLLKAKKA 339 (405)
Q Consensus 267 ~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a-------GlL~g~~~ 339 (405)
..+.++..++++++.+||+|+||||++.+..+..++.+.+||+++++++|+|++||+|+++|+++ |||+||++
T Consensus 83 ~~l~~~~~l~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La~a~~~~~g~gll~G~~~ 162 (244)
T 3kkl_A 83 KALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAI 162 (244)
T ss_dssp HHHHTCEEGGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTTCEE
T ss_pred HHhcCCCChHHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhhccccCCceeCCcee
Confidence 56777888999988999999999998555778899999999999999999999999999999999 99999999
Q ss_pred ecCcchhhh-------------------hhc--CcccC------CcEEEcCCeEecCChhhHHHHHHHHHHHccCHHH
Q 015523 340 TAHPSVIGK-------------------LTN--EVVNG------TKVVVDGKVITSRGLANVIDFALAIVSKFFGHAR 390 (405)
Q Consensus 340 t~~~~~~~~-------------------l~~--~~~~~------~~~v~dg~iiTa~g~~~~~~~~l~~i~~l~g~~~ 390 (405)
|+||...+. +++ ..+.+ ..+|+|||+||++|+.++.+|++++|+.+.+.+.
T Consensus 163 T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~~~ 240 (244)
T 3kkl_A 163 TGFPLEGEIALGVDDILRSRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSVEH 240 (244)
T ss_dssp CCSCHHHHHHHTTHHHHHHTTCCCHHHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC---
T ss_pred cCCCcHHHHhhhhhhhccccccccHHHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhhhh
Confidence 999987543 222 34444 5899999999999999999999999999998764
No 45
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.96 E-value=6.2e-30 Score=233.12 Aligned_cols=168 Identities=17% Similarity=0.216 Sum_probs=146.3
Q ss_pred cCEEEEEeC------------CCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeec----------------------CC
Q 015523 220 MPRVLIPIA------------NGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVA----------------------SQ 265 (405)
Q Consensus 220 ~~~V~il~~------------~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~----------------------~~ 265 (405)
|+||+|++. +|+...|+..|+++|+++||+++++|++++ +... +.
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~-~~~d~~s~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGK-FGWDEHSLAKDFLNGQDETDFKNKDSDF 81 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSC-CCBCGGGGSTTTSCHHHHHHHHCTTSHH
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCC-CCcCcccccccccChHHHHHHHhhhHHH
Confidence 579999996 789999999999999999999999999987 5321 23
Q ss_pred CcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcC-------CCCCCe
Q 015523 266 GVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHG-------LLKAKK 338 (405)
Q Consensus 266 g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aG-------lL~g~~ 338 (405)
|..+.++..++++++.+||+|+||||+..+..+..++.+++||+++++++|+|++||+|+++|+++| ||+||+
T Consensus 82 g~~l~~~~~l~~v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~ag~~~~g~~lL~G~~ 161 (243)
T 1rw7_A 82 NKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKS 161 (243)
T ss_dssp HHHHHTCBCGGGCCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTTCE
T ss_pred HhhhccCCChHHCCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHHhcCcccCCceeeCCcE
Confidence 6678888899998778999999999986566788899999999999999999999999999999999 999999
Q ss_pred eecCcchhhh-------------------hh--cCccc------CCcEEEcCCeEecCChhhHHHHHHHHHHHccCH
Q 015523 339 ATAHPSVIGK-------------------LT--NEVVN------GTKVVVDGKVITSRGLANVIDFALAIVSKFFGH 388 (405)
Q Consensus 339 ~t~~~~~~~~-------------------l~--~~~~~------~~~~v~dg~iiTa~g~~~~~~~~l~~i~~l~g~ 388 (405)
+|+||...+. ++ ...+. +..+|+|||+|||+|+.++++|++++|+++-..
T Consensus 162 ~T~~~~~~e~~~~~~~~~p~~~~~~l~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~~ 238 (243)
T 1rw7_A 162 ITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKNH 238 (243)
T ss_dssp ECCSCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC--
T ss_pred EeecCCHHHhhccccccccccccccHHHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhhc
Confidence 9999986664 33 23444 788999999999999999999999999988543
No 46
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.96 E-value=7.4e-29 Score=242.33 Aligned_cols=170 Identities=22% Similarity=0.303 Sum_probs=153.7
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCc---------------eeecCCCcEEeeCCCccCcCCCCc
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERST---------------QIVASQGVKIIADKSISDAAESVY 283 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~---------------~v~~~~g~~v~~~~~l~~~~~~~~ 283 (405)
+++||+|+++|||++.|+..++++|+++|++++++|++++. .+.++.|..+.++..++++++.+|
T Consensus 11 ~~~kv~ill~dg~e~~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 90 (396)
T 3uk7_A 11 NSRTVLILCGDYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSKY 90 (396)
T ss_dssp CCCEEEEECCTTEEHHHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGGC
T ss_pred cCCeEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCcccC
Confidence 46899999999999999999999999999999999998651 245677999999999999888899
Q ss_pred cEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhc--CcccC----C
Q 015523 284 DLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTN--EVVNG----T 357 (405)
Q Consensus 284 D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~--~~~~~----~ 357 (405)
|+|+||||. +...+..++.+++||+++++++|+|+++|+|+++|+++|||+||++|+||...+.|++ ..+.+ +
T Consensus 91 D~livpGG~-~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~ 169 (396)
T 3uk7_A 91 DGLVIPGGR-APEYLALTASVVELVKEFSRSGKPIASICHGQLILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITPD 169 (396)
T ss_dssp SEEEECCBS-HHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCCSSTT
T ss_pred CEEEECCCc-chhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhccccCCCEeecCcchHHHHHHCCCEEECCCCCc
Confidence 999999997 4566788999999999999999999999999999999999999999999999999875 23333 3
Q ss_pred cEEEcCCeEecCChhhHHHHHHHHHHHccCHH
Q 015523 358 KVVVDGKVITSRGLANVIDFALAIVSKFFGHA 389 (405)
Q Consensus 358 ~~v~dg~iiTa~g~~~~~~~~l~~i~~l~g~~ 389 (405)
.+|.|||+|||+|+.++.+|++++|+++.|++
T Consensus 170 ~~v~Dg~iiT~~g~~~~~d~al~li~~l~g~~ 201 (396)
T 3uk7_A 170 VCVVDGSLITAATYEGHPEFIQLFVKALGGKI 201 (396)
T ss_dssp CEEEETTEEEESSGGGHHHHHHHHHHHTTCEE
T ss_pred ceEecCCEEEecCcccHHHHHHHHHHHHhccc
Confidence 48999999999999999999999999999975
No 47
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.96 E-value=3.6e-29 Score=227.00 Aligned_cols=171 Identities=15% Similarity=0.181 Sum_probs=142.9
Q ss_pred CcEEEEEec------------CCCchhhHHHHHHHHHhcCCEEEEEecCCCceeE---------------------eccC
Q 015523 17 ALNVLVPVG------------FGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVE---------------------ASSG 63 (405)
Q Consensus 17 ~~ki~ill~------------~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~---------------------~~~g 63 (405)
|+||+|++. +||+..|+..|+++|+++|++|+++|++++.++. ++.+
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 82 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFN 82 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSCCCBCTTC--------------------CH
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcCCccccccccCHHHHHHHHHhhHHHH
Confidence 578999986 3888999999999999999999999999863231 1234
Q ss_pred cEEecCcccCCCCCCcccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc-------CCCCCcc
Q 015523 64 TRLVADTSISNCSHQVFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW-------GLLRRKQ 136 (405)
Q Consensus 64 ~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a-------gll~g~~ 136 (405)
..+.++.+++++++.+||+|+||||+.....+..++.+.+||+++++++|+|++||+|++ +|+++ |+|+|++
T Consensus 83 ~~l~~~~~l~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~-~La~a~~~~~g~gll~G~~ 161 (244)
T 3kkl_A 83 KALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPL-LFDGLIDIKTTRPLIEGKA 161 (244)
T ss_dssp HHHHTCEEGGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTTSSBTTTTCE
T ss_pred HHhcCCCChHHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHhhccccCCceeCCce
Confidence 567788889999888999999999964456788999999999999999999999999766 79988 9999999
Q ss_pred eeeccCccc-------------------cCCC--Ccccc------CcEEEeCCeEcCCCcccHHHHHHHHHHHhcChHH
Q 015523 137 ITCHPAFTD-------------------KLPT--FWAVK------SNIHVSGEVTTSRGPGTSFEFALCLVEQLFGESV 188 (405)
Q Consensus 137 ~t~~~~~~~-------------------~l~~--~~~~~------~~~v~dg~iiT~~g~~~~~~~~l~ii~~~~g~~~ 188 (405)
+|+||...+ .+++ ..+++ +.+|+|||+|||+|+.++.+|++++|+++.+.+.
T Consensus 162 ~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~~~ 240 (244)
T 3kkl_A 162 ITGFPLEGEIALGVDDILRSRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSVEH 240 (244)
T ss_dssp ECCSCHHHHHHHTTHHHHHHTTCCCHHHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC---
T ss_pred ecCCCcHHHHhhhhhhhccccccccHHHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhhhh
Confidence 999998643 2333 45555 4799999999999999999999999999988764
No 48
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.96 E-value=1.7e-29 Score=235.44 Aligned_cols=170 Identities=19% Similarity=0.201 Sum_probs=149.0
Q ss_pred cCEEEEEeCC--------------CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecC--------------C---CcE
Q 015523 220 MPRVLIPIAN--------------GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVAS--------------Q---GVK 268 (405)
Q Consensus 220 ~~~V~il~~~--------------g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~--------------~---g~~ 268 (405)
.+||+|++.+ ||.+.|+..|+++|+++||+|+++|++++ ++... . |..
T Consensus 48 ~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g~-~v~~d~~s~~~~~~~~~~~~~~~g~~ 126 (291)
T 1n57_A 48 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGL-MTKFEYWAMPHKDEKVMPFFEQHKSL 126 (291)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSC-CCCBCGGGCCTTCTTHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCC-cccccccccccccHHHHHHHHhccce
Confidence 4699999985 79999999999999999999999999998 76532 1 778
Q ss_pred EeeCCCccCc-----CCCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcC----CCCCCee
Q 015523 269 IIADKSISDA-----AESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHG----LLKAKKA 339 (405)
Q Consensus 269 v~~~~~l~~~-----~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aG----lL~g~~~ 339 (405)
+.++..++++ ++.+||+||||||++....+..++.+++||+++++++|+|++||+|+++|+++| ||+||++
T Consensus 127 l~~~~~l~~v~~~~~~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La~a~~~~GLL~Gr~~ 206 (291)
T 1n57_A 127 FRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGYSI 206 (291)
T ss_dssp HHSCEEHHHHHHTCCTTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGGTTSCCTTTTCEE
T ss_pred ecCCccHHHHhhhccCcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHHhhcccCccCCCCEE
Confidence 8888888874 568999999999975444678899999999999999999999999999988885 9999999
Q ss_pred ecCcchhhhhhc---------------------Cccc----CCcEEEcCCeEecCChhhHHHHHHHHHHHccCHHH
Q 015523 340 TAHPSVIGKLTN---------------------EVVN----GTKVVVDGKVITSRGLANVIDFALAIVSKFFGHAR 390 (405)
Q Consensus 340 t~~~~~~~~l~~---------------------~~~~----~~~~v~dg~iiTa~g~~~~~~~~l~~i~~l~g~~~ 390 (405)
|+||...+.+.+ ..+. +..+|+|||+|||+|+.++++|++++|+++.|.+.
T Consensus 207 Tt~~~~~e~~~~~~~~~~~~~P~~le~~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~~ 282 (291)
T 1n57_A 207 CAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYA 282 (291)
T ss_dssp CCCCGGGGGTTTTTTSSSSCCSSCHHHHHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHHC
T ss_pred EeCCCHHHhhhccccccccccchhHHHHHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCchh
Confidence 999998877632 3455 78899999999999999999999999999998764
No 49
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.96 E-value=5.7e-29 Score=225.74 Aligned_cols=168 Identities=20% Similarity=0.208 Sum_probs=143.5
Q ss_pred cCEEEEEeCC------------CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCC----------------------
Q 015523 220 MPRVLIPIAN------------GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQ---------------------- 265 (405)
Q Consensus 220 ~~~V~il~~~------------g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~---------------------- 265 (405)
|+||+|++.+ ||++.|+..|+++|+++|++|+++|++++ ......
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g~-~~~d~~s~~~~~~~~~~~~~~~~~~~~~ 87 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGT-FGWDEHSLTQEYLSKEDEKVLHSEHNHF 87 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSSC-CCBCSGGGSGGGCCHHHHHHHTCSSCHH
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCCC-cccCcccccccccCHHHHHHHHhhhHHH
Confidence 6899999986 88999999999999999999999999987 432211
Q ss_pred CcEEee-CCCccCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc------CCCCCCe
Q 015523 266 GVKIIA-DKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH------GLLKAKK 338 (405)
Q Consensus 266 g~~v~~-~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a------GlL~g~~ 338 (405)
+..+.. +..++++++.+||+|+||||++.+..+..++.+++||+++++++|+|++||+|+++|+++ |||+||+
T Consensus 88 ~~~l~~~~~~l~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La~a~~~~g~gll~G~~ 167 (247)
T 3n7t_A 88 MEKMNKQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGIHDENGDSVIKDKT 167 (247)
T ss_dssp HHHHHHCCEEGGGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGCBCTTSSBTTTTCE
T ss_pred HHHHhccCCCHHHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHhhcccCCccccCce
Confidence 223555 778899888999999999998544678899999999999999999999999999999999 9999999
Q ss_pred eecCcchhhh-------------------hhc--CcccC------CcEEEcCCeEecCChhhHHHHHHHHHHHccCH
Q 015523 339 ATAHPSVIGK-------------------LTN--EVVNG------TKVVVDGKVITSRGLANVIDFALAIVSKFFGH 388 (405)
Q Consensus 339 ~t~~~~~~~~-------------------l~~--~~~~~------~~~v~dg~iiTa~g~~~~~~~~l~~i~~l~g~ 388 (405)
+|+||...+. +++ ..+.+ ..+|+|||+||++|+.++.+|++++|+.|.+.
T Consensus 168 ~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~~ 244 (247)
T 3n7t_A 168 VTGFTTKGEIMIKVIDKMREDHLHTIADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEGI 244 (247)
T ss_dssp ECCCCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHhhhhhhhhccccchhhHHHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhhh
Confidence 9999987543 222 34444 58999999999999999999999999998653
No 50
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.96 E-value=5.4e-29 Score=226.91 Aligned_cols=167 Identities=16% Similarity=0.170 Sum_probs=142.8
Q ss_pred CcEEEEEec------------CCCchhhHHHHHHHHHhcCCEEEEEecCCCceeE---e-------------------cc
Q 015523 17 ALNVLVPVG------------FGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVE---A-------------------SS 62 (405)
Q Consensus 17 ~~ki~ill~------------~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~---~-------------------~~ 62 (405)
|+||+|++. +||...|+..|+++|++++|+++++|++++ +.. + +.
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~-~~~d~~s~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGK-FGWDEHSLAKDFLNGQDETDFKNKDSDF 81 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSC-CCBCGGGGSTTTSCHHHHHHHHCTTSHH
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCC-CCcCcccccccccChHHHHHHHhhhHHH
Confidence 468999997 688999999999999999999999999987 532 1 23
Q ss_pred CcEEecCcccCCCCCCcccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcC-------CCCCc
Q 015523 63 GTRLVADTSISNCSHQVFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWG-------LLRRK 135 (405)
Q Consensus 63 g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ag-------ll~g~ 135 (405)
|..+.++..+++++..+||+||||||+.....+..++.+.+||+++++++++|++||+|+. +|+++| +|+|+
T Consensus 82 g~~l~~~~~l~~v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~-~La~ag~~~~g~~lL~G~ 160 (243)
T 1rw7_A 82 NKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPA-IFDGLTDKKTGRPLIEGK 160 (243)
T ss_dssp HHHHHTCBCGGGCCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTTSSBTTTTC
T ss_pred HhhhccCCChHHCCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHH-HHHhcCcccCCceeeCCc
Confidence 5678888899988767899999999964456678899999999999999999999999765 899999 99999
Q ss_pred ceeeccCcccc-------------------CC--CCccc------cCcEEEeCCeEcCCCcccHHHHHHHHHHHhcC
Q 015523 136 QITCHPAFTDK-------------------LP--TFWAV------KSNIHVSGEVTTSRGPGTSFEFALCLVEQLFG 185 (405)
Q Consensus 136 ~~t~~~~~~~~-------------------l~--~~~~~------~~~~v~dg~iiT~~g~~~~~~~~l~ii~~~~g 185 (405)
++|+||...+. |+ ...+. ++.+|+|||+|||+|+.++.+|++++|+++..
T Consensus 161 ~~T~~~~~~e~~~~~~~~~p~~~~~~l~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~ 237 (243)
T 1rw7_A 161 SITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 (243)
T ss_dssp EECCSCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC-
T ss_pred EEeecCCHHHhhccccccccccccccHHHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhh
Confidence 99999986554 22 23455 66799999999999999999999999998754
No 51
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.95 E-value=2.7e-28 Score=227.31 Aligned_cols=170 Identities=15% Similarity=0.244 Sum_probs=145.2
Q ss_pred CcEEEEEecC--------------CCchhhHHHHHHHHHhcCCEEEEEecCCCceeEec--------------c---CcE
Q 015523 17 ALNVLVPVGF--------------GTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEAS--------------S---GTR 65 (405)
Q Consensus 17 ~~ki~ill~~--------------g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~--------------~---g~~ 65 (405)
++||+|++.+ ||...|+..++++|++++|+|+++|++++ +++.+ . |..
T Consensus 48 ~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g~-~v~~d~~s~~~~~~~~~~~~~~~g~~ 126 (291)
T 1n57_A 48 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGL-MTKFEYWAMPHKDEKVMPFFEQHKSL 126 (291)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSC-CCCBCGGGCCTTCTTHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCC-cccccccccccccHHHHHHHHhccce
Confidence 4699999986 79999999999999999999999999997 77532 2 777
Q ss_pred EecCcccCCC-----CCCcccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc----CCCCCcc
Q 015523 66 LVADTSISNC-----SHQVFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW----GLLRRKQ 136 (405)
Q Consensus 66 v~~~~~~~~~-----~~~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a----gll~g~~ 136 (405)
+.++..++++ +..+||+||||||+.....+..++.+.+||+++++++++|++||+|++ +|+++ |+|+|++
T Consensus 127 l~~~~~l~~v~~~~~~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~-~La~a~~~~GLL~Gr~ 205 (291)
T 1n57_A 127 FRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPA-AFLALRHGDNPLNGYS 205 (291)
T ss_dssp HHSCEEHHHHHHTCCTTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGGGGTTSCCTTTTCE
T ss_pred ecCCccHHHHhhhccCcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHH-HHHhhcccCccCCCCE
Confidence 8888888873 346899999999953333678899999999999999999999999765 67776 5999999
Q ss_pred eeeccCccccCCC---------------------Cccc----cCcEEEeCCeEcCCCcccHHHHHHHHHHHhcChHH
Q 015523 137 ITCHPAFTDKLPT---------------------FWAV----KSNIHVSGEVTTSRGPGTSFEFALCLVEQLFGESV 188 (405)
Q Consensus 137 ~t~~~~~~~~l~~---------------------~~~~----~~~~v~dg~iiT~~g~~~~~~~~l~ii~~~~g~~~ 188 (405)
+|+||...+.+++ ..+. +..+|+|||+|||+|+.++.+|++++|+++.|.+.
T Consensus 206 ~Tt~~~~~e~~~~~~~~~~~~~P~~le~~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~~ 282 (291)
T 1n57_A 206 ICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYA 282 (291)
T ss_dssp ECCCCGGGGGTTTTTTSSSSCCSSCHHHHHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHHC
T ss_pred EEeCCCHHHhhhccccccccccchhHHHHHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCchh
Confidence 9999998887642 2455 67799999999999999999999999999988754
No 52
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.95 E-value=2.6e-28 Score=221.41 Aligned_cols=169 Identities=18% Similarity=0.183 Sum_probs=141.0
Q ss_pred CcEEEEEecC------------CCchhhHHHHHHHHHhcCCEEEEEecCCCceeEec---------------------cC
Q 015523 17 ALNVLVPVGF------------GTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEAS---------------------SG 63 (405)
Q Consensus 17 ~~ki~ill~~------------g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~---------------------~g 63 (405)
|+||+|++.+ ||...|+..|+++|+++|++|+++|++++.++... .+
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 88 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGTFGWDEHSLTQEYLSKEDEKVLHSEHNHFM 88 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSSCCCBCSGGGSGGGCCHHHHHHHTCSSCHHH
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCCCcccCcccccccccCHHHHHHHHhhhHHHH
Confidence 6899999986 88899999999999999999999999987323110 12
Q ss_pred cEEec-CcccCCCCCCcccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc------CCCCCcc
Q 015523 64 TRLVA-DTSISNCSHQVFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW------GLLRRKQ 136 (405)
Q Consensus 64 ~~v~~-~~~~~~~~~~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a------gll~g~~ 136 (405)
..+.. +..++++++.+||+|+||||+.....+..++.+.+||+++++++|+|++||+|++ +|+++ |+|+|++
T Consensus 89 ~~l~~~~~~l~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~-~La~a~~~~g~gll~G~~ 167 (247)
T 3n7t_A 89 EKMNKQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPA-MLPGIHDENGDSVIKDKT 167 (247)
T ss_dssp HHHHHCCEEGGGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGGGCBCTTSSBTTTTCE
T ss_pred HHHhccCCCHHHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHH-HHHHhhcccCCccccCce
Confidence 23555 7788888888999999999963336688999999999999999999999999866 79998 9999999
Q ss_pred eeeccCcccc-------------------CCC--Ccccc------CcEEEeCCeEcCCCcccHHHHHHHHHHHhcCh
Q 015523 137 ITCHPAFTDK-------------------LPT--FWAVK------SNIHVSGEVTTSRGPGTSFEFALCLVEQLFGE 186 (405)
Q Consensus 137 ~t~~~~~~~~-------------------l~~--~~~~~------~~~v~dg~iiT~~g~~~~~~~~l~ii~~~~g~ 186 (405)
+|+||...+. +++ ..+++ ..+|+|||+||++|+.++.+|++++|+++.+.
T Consensus 168 ~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~~ 244 (247)
T 3n7t_A 168 VTGFTTKGEIMIKVIDKMREDHLHTIADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEGI 244 (247)
T ss_dssp ECCCCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHhhhhhhhhccccchhhHHHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhhh
Confidence 9999987543 222 45554 47999999999999999999999999998643
No 53
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.95 E-value=1.3e-28 Score=222.90 Aligned_cols=171 Identities=25% Similarity=0.328 Sum_probs=142.8
Q ss_pred CcCEEEEEeC-----CCCcHHHHHHHHHHHHhCCCeEEEEeecCCce--e---------ecCCCcEEeeC-------CCc
Q 015523 219 RMPRVLIPIA-----NGSEEIEIVTIVDILRRAKVDVVVASVERSTQ--I---------VASQGVKIIAD-------KSI 275 (405)
Q Consensus 219 ~~~~V~il~~-----~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~--v---------~~~~g~~v~~~-------~~l 275 (405)
.|+||+|+++ +||.+.|+..|+++|+++||+++++|++++ + + .++.|+.+.++ ..+
T Consensus 5 ~m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~-~~~v~d~~s~~~~~~~~g~~i~~~~~~~~~~~~l 83 (232)
T 1vhq_A 5 TMKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ-QVDVINHLTGEAMTETRNVLIEAARITRGEIRPL 83 (232)
T ss_dssp -CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSB-CSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEG
T ss_pred cCCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCC-CCcccccccccchhhhhhhhHHHHHhhhcCCCCH
Confidence 4689999999 999999999999999999999999999987 4 3 67788888887 788
Q ss_pred cCcCCCCccEEEEcCCccchHhh----------hcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCC-CCeeecC-c
Q 015523 276 SDAAESVYDLIILPGGVAGAERL----------QKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLK-AKKATAH-P 343 (405)
Q Consensus 276 ~~~~~~~~D~livpgG~~~~~~~----------~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~-g~~~t~~-~ 343 (405)
+++++.+||+|+||||++....+ +.++.+++||++++++||+|++||+|+++|+++ |+ ||++|+| |
T Consensus 84 ~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a--L~~Gr~~Tth~~ 161 (232)
T 1vhq_A 84 AQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI--FDFPLRLTIGTD 161 (232)
T ss_dssp GGCCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH--CSSCCEECCCSC
T ss_pred HHcCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH--hcCCCEEeccCC
Confidence 88777889999999997432212 248999999999999999999999999999999 79 9999999 5
Q ss_pred -chhhhhhc--CcccC----CcEEE-cCCeEecCChhhHHHHHHHHHHHccCHHH-HHHHHh
Q 015523 344 -SVIGKLTN--EVVNG----TKVVV-DGKVITSRGLANVIDFALAIVSKFFGHAR-TRSVAE 396 (405)
Q Consensus 344 -~~~~~l~~--~~~~~----~~~v~-dg~iiTa~g~~~~~~~~l~~i~~l~g~~~-a~~v~~ 396 (405)
...+.|++ ..+.+ +.++. |||+|||+ +++|++++|+++.|.+. ++.+.+
T Consensus 162 ~~~~~~l~~~g~~~~~~~~~~~~vd~dg~liTs~----~~d~al~lv~~~~G~~~~~~~~~~ 219 (232)
T 1vhq_A 162 IDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTP----AYMLAQNIAEAASGIDKLVSRVLV 219 (232)
T ss_dssp HHHHHHHHHTTCEECCCCTTCCEEETTTTEEEEC----GGGTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEecCCCCceEEecCCCEEECC----CHHHHHHHHHHHcCHHHHHHHHHH
Confidence 67788876 44444 34454 59999997 78999999999999974 444443
No 54
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.94 E-value=2.4e-28 Score=221.14 Aligned_cols=179 Identities=20% Similarity=0.260 Sum_probs=143.0
Q ss_pred CCCcEEEEEec-----CCCchhhHHHHHHHHHhcCCEEEEEecCCCce--e---------EeccCcEEecC-------cc
Q 015523 15 SFALNVLVPVG-----FGTEEMEAVIIVDVLRRAGAQVTMASVEPQLE--V---------EASSGTRLVAD-------TS 71 (405)
Q Consensus 15 ~~~~ki~ill~-----~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~--v---------~~~~g~~v~~~-------~~ 71 (405)
+.|+||+|+++ +||+..|+..++++|++++|+++++|++++ + + +++.|+.+.++ ..
T Consensus 4 ~~m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~-~~~v~d~~s~~~~~~~~g~~i~~~~~~~~~~~~ 82 (232)
T 1vhq_A 4 ITMKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ-QVDVINHLTGEAMTETRNVLIEAARITRGEIRP 82 (232)
T ss_dssp --CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSB-CSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEE
T ss_pred ccCCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCC-CCcccccccccchhhhhhhhHHHHHhhhcCCCC
Confidence 34679999999 999999999999999999999999999986 4 3 77888888887 77
Q ss_pred cCCCCCCcccEEEEcCCchhhh----------ccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCC-Ccceeec
Q 015523 72 ISNCSHQVFDLIALPGGMPGSV----------RLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLR-RKQITCH 140 (405)
Q Consensus 72 ~~~~~~~~~d~liipgg~~~~~----------~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~-g~~~t~~ 140 (405)
++++++.+||+|+||||+.... .++.++.+.+||+++++++++|++||+|+. +|+++ |+ |+++|+|
T Consensus 83 l~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~-~La~a--L~~Gr~~Tth 159 (232)
T 1vhq_A 83 LAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPA-MLPKI--FDFPLRLTIG 159 (232)
T ss_dssp GGGCCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGG-GHHHH--CSSCCEECCC
T ss_pred HHHcCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHH--hcCCCEEecc
Confidence 8887666899999999964322 123489999999999999999999999755 79988 79 9999999
Q ss_pred -c-CccccCCC--Ccccc---CcEEEe--CCeEcCCCcccHHHHHHHHHHHhcChHHHHHHHHhcccccccC
Q 015523 141 -P-AFTDKLPT--FWAVK---SNIHVS--GEVTTSRGPGTSFEFALCLVEQLFGESVAKEIGELLLMHNADN 203 (405)
Q Consensus 141 -~-~~~~~l~~--~~~~~---~~~v~d--g~iiT~~g~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~ 203 (405)
| ...+.|++ ..+++ .++++| ||+|||+ ++|+++++|+++.|.+.+ +.+.+.|.+.+.
T Consensus 160 ~~~~~~~~l~~~g~~~~~~~~~~~~vd~dg~liTs~----~~d~al~lv~~~~G~~~~--~~~~~~~~~~~~ 225 (232)
T 1vhq_A 160 TDIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTP----AYMLAQNIAEAASGIDKL--VSRVLVLAEEGG 225 (232)
T ss_dssp SCHHHHHHHHHTTCEECCCCTTCCEEETTTTEEEEC----GGGTCSSHHHHHHHHHHH--HHHHHHHHC---
T ss_pred CCHHHHHHHHHcCCEEecCCCCceEEecCCCEEECC----CHHHHHHHHHHHcCHHHH--HHHHHHhhhccC
Confidence 6 66677765 45554 245555 9999996 888999999999999754 444555555443
No 55
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.94 E-value=7.6e-28 Score=217.69 Aligned_cols=155 Identities=21% Similarity=0.249 Sum_probs=130.1
Q ss_pred CcCEEEEEeC-----CCCcHHHHHHHHHHHHhCCCeEEEEeecCC----------ceeecCCCcEEeeC-------CCcc
Q 015523 219 RMPRVLIPIA-----NGSEEIEIVTIVDILRRAKVDVVVASVERS----------TQIVASQGVKIIAD-------KSIS 276 (405)
Q Consensus 219 ~~~~V~il~~-----~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~----------~~v~~~~g~~v~~~-------~~l~ 276 (405)
+++||+|++. |||++.|+..|+++|+++|++++++|++++ .++.++.|+.+.++ ..++
T Consensus 22 M~kkV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~~~~g~~v~~s~g~~v~~d~~~~~~~~~l~ 101 (242)
T 3l3b_A 22 MALNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQVVDHKKKESVGEVRNILVESARIARGSVYDIE 101 (242)
T ss_dssp --CEEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSSBCSCEEETTTTEEESCCCBHHHHHHHHTTTCEEEGG
T ss_pred ccCEEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCcccccccccCccccccCCeEEecchhccccCCChH
Confidence 4589999998 999999999999999999999999999985 24667788888887 6789
Q ss_pred CcCCCCccEEEEcCCccchHhh-----------hcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcC-CCCCCeeecCcc
Q 015523 277 DAAESVYDLIILPGGVAGAERL-----------QKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHG-LLKAKKATAHPS 344 (405)
Q Consensus 277 ~~~~~~~D~livpgG~~~~~~~-----------~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aG-lL~g~~~t~~~~ 344 (405)
++++.+||+|+||||......+ ..++.+++||+++++++|+|++||+|+++|+++| ||+|+++|+||.
T Consensus 102 dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag~lL~Gr~~T~~~~ 181 (242)
T 3l3b_A 102 QIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALLKDIAKVKVTIGED 181 (242)
T ss_dssp GCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHHTTTCCCEECCCC-
T ss_pred HCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhCcccCCCEEEecCC
Confidence 8877899999999997543322 5679999999999999999999999999999999 999999999998
Q ss_pred hhhhhhc--CcccC---CcEEEc--CCeEecCChhh
Q 015523 345 VIGKLTN--EVVNG---TKVVVD--GKVITSRGLAN 373 (405)
Q Consensus 345 ~~~~l~~--~~~~~---~~~v~d--g~iiTa~g~~~ 373 (405)
....+++ ..+.+ +.+|+| ||+||++++..
T Consensus 182 ~~~~l~~~Ga~~~~~~~~~vVvD~~g~liTs~a~~~ 217 (242)
T 3l3b_A 182 SNGLIDKMGGVHVDCPTIKSVKDDVNRIFSCSAYMR 217 (242)
T ss_dssp ---CHHHHTCEECCCCTTCCEEETTTTEEEECGGGS
T ss_pred hHHHHHHCCCEEEcCCCCeEEEECCCCEEECcCccc
Confidence 8776765 45555 578888 99999998754
No 56
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.93 E-value=3.2e-27 Score=213.59 Aligned_cols=168 Identities=17% Similarity=0.158 Sum_probs=135.2
Q ss_pred CCcEEEEEec-----CCCchhhHHHHHHHHHhcCCEEEEEecCCCc----------eeEeccCcEEecC-------cccC
Q 015523 16 FALNVLVPVG-----FGTEEMEAVIIVDVLRRAGAQVTMASVEPQL----------EVEASSGTRLVAD-------TSIS 73 (405)
Q Consensus 16 ~~~ki~ill~-----~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~----------~v~~~~g~~v~~~-------~~~~ 73 (405)
+++||+|++. |||+..|+..|+++|+++|++++++|+++++ ++.++.|+.+.++ ..++
T Consensus 22 M~kkV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~~~~g~~v~~s~g~~v~~d~~~~~~~~~l~ 101 (242)
T 3l3b_A 22 MALNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQVVDHKKKESVGEVRNILVESARIARGSVYDIE 101 (242)
T ss_dssp --CEEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSSBCSCEEETTTTEEESCCCBHHHHHHHHTTTCEEEGG
T ss_pred ccCEEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCcccccccccCccccccCCeEEecchhccccCCChH
Confidence 4479999998 9999999999999999999999999998852 4667788888887 6788
Q ss_pred CCCCCcccEEEEcCCchhhhc-----------cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcC-CCCCcceeecc
Q 015523 74 NCSHQVFDLIALPGGMPGSVR-----------LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWG-LLRRKQITCHP 141 (405)
Q Consensus 74 ~~~~~~~d~liipgg~~~~~~-----------~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ag-ll~g~~~t~~~ 141 (405)
++++.+||+|+||||+..... +..++.+.+||+++++++++|++||+|++ +|+++| +|+|+++|+||
T Consensus 102 dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~-~La~ag~lL~Gr~~T~~~ 180 (242)
T 3l3b_A 102 QIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPA-VVVALLKDIAKVKVTIGE 180 (242)
T ss_dssp GCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHH-HHHHHHTTTCCCEECCCC
T ss_pred HCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHhCcccCCCEEEecC
Confidence 887778999999999643221 25679999999999999999999999765 799999 99999999999
Q ss_pred CccccCCC--Ccccc---CcEEEe--CCeEcCCCcccHHHHHHHHHHHhcChHH
Q 015523 142 AFTDKLPT--FWAVK---SNIHVS--GEVTTSRGPGTSFEFALCLVEQLFGESV 188 (405)
Q Consensus 142 ~~~~~l~~--~~~~~---~~~v~d--g~iiT~~g~~~~~~~~l~ii~~~~g~~~ 188 (405)
.....+++ ..+++ +++|+| ||+|||.+... +..+.+...|.+.
T Consensus 181 ~~~~~l~~~Ga~~~~~~~~~vVvD~~g~liTs~a~~~----~~~~~e~~~g~~~ 230 (242)
T 3l3b_A 181 DSNGLIDKMGGVHVDCPTIKSVKDDVNRIFSCSAYMR----NDSLYNVYLGIQD 230 (242)
T ss_dssp ----CHHHHTCEECCCCTTCCEEETTTTEEEECGGGS----CCCHHHHHHHHHH
T ss_pred ChHHHHHHCCCEEEcCCCCeEEEECCCCEEECcCccc----CCCHHHHHhCHHH
Confidence 98777766 66666 578999 99999998764 3345555555543
No 57
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.88 E-value=7.8e-22 Score=201.48 Aligned_cols=187 Identities=18% Similarity=0.218 Sum_probs=150.9
Q ss_pred cChHHHHHHHHhcccccccCc------ccccccccccc-ccC---CcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEE
Q 015523 184 FGESVAKEIGELLLMHNADNS------LKKEEFNEVEW-FFD---RMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVA 253 (405)
Q Consensus 184 ~g~~~a~~~a~~l~~~~~~~~------~~~~~~~~~~~-~~~---~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~v 253 (405)
..++++++|++.+..+..... ......++... ... +++||+||++||++..|+..++++|..+||+++++
T Consensus 488 ~d~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~ls~~~~~~~~~~m~~rkVaILl~dGfe~~El~~p~dvL~~AG~~V~iv 567 (715)
T 1sy7_A 488 IDLGLAQTIAEMVGGEAPTTTNHPNHGRKTINLSQTEFPPATPTIKSRRVAIIIADGYDNVAYDAAYAAISANQAIPLVI 567 (715)
T ss_dssp TCHHHHHHHHHHHCSCCCSCCSSCCCCCCCSSCSGGGCCCSSSCCTTCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHhCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCEEEEEEcCCCCHHHHHHHHHHHHhcCCEEEEE
Confidence 467888899999976532210 12222222222 112 34799999999999999999999999999999999
Q ss_pred eecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc-C
Q 015523 254 SVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH-G 332 (405)
Q Consensus 254 s~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a-G 332 (405)
|++++ ++.++.|..+.++..++++++.+||+||||||..+...+..++.+++||+++++++|+|++||+|+++|+++ |
T Consensus 568 S~~gg-~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlG 646 (715)
T 1sy7_A 568 GPRRS-KVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIA 646 (715)
T ss_dssp ESCSS-CEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHC
T ss_pred ECCCC-ceecCCCceEecccccccCCcccCCEEEEcCCcccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHccC
Confidence 99998 999999999999999999877889999999996456677889999999999999999999999999999999 9
Q ss_pred CCCCCeeecCcchhhhhhcCcccCCcEEEcCCeEecCChh------------hHHHHHHHHHHHcc
Q 015523 333 LLKAKKATAHPSVIGKLTNEVVNGTKVVVDGKVITSRGLA------------NVIDFALAIVSKFF 386 (405)
Q Consensus 333 lL~g~~~t~~~~~~~~l~~~~~~~~~~v~dg~iiTa~g~~------------~~~~~~l~~i~~l~ 386 (405)
|.+-+... ...+|+||++||++|+. ++.+|+..+++.+.
T Consensus 647 L~~L~~aG---------------a~~VVvDg~lITs~gp~~~~l~~~~~i~~s~~~fa~~fi~~L~ 697 (715)
T 1sy7_A 647 LPQVTVSS---------------EAEVHESYGVVTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIA 697 (715)
T ss_dssp CTTSCCCC---------------SSSCEEETTEEEESSCCTTTTTSCCCCSTTCSSHHHHHHHHHH
T ss_pred cHhHHhcC---------------CCcEEEeCCEEECCCCcccccccccccccCHHHHHHHHHHHHH
Confidence 84322211 16799999999999986 55678888887764
No 58
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.84 E-value=1.8e-20 Score=191.48 Aligned_cols=154 Identities=14% Similarity=0.075 Sum_probs=133.0
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~ 94 (405)
++++||+||++|||+..|+..++++|++++++++++|++++ +|++++|..+.++..++++++.+||+||||||......
T Consensus 532 m~~rkVaILl~dGfe~~El~~p~dvL~~AG~~V~ivS~~gg-~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~~~~ 610 (715)
T 1sy7_A 532 IKSRRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRS-KVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAET 610 (715)
T ss_dssp CTTCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSS-CEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHH
T ss_pred CCCCEEEEEEcCCCCHHHHHHHHHHHHhcCCEEEEEECCCC-ceecCCCceEecccccccCCcccCCEEEEcCCcccHhh
Confidence 35689999999999999999999999999999999999998 99999999999999999987778999999999545666
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc-CCCCCcceeeccCccccCCCCccccCcEEEeCCeEcCCCcc---
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW-GLLRRKQITCHPAFTDKLPTFWAVKSNIHVSGEVTTSRGPG--- 170 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a-gll~g~~~t~~~~~~~~l~~~~~~~~~~v~dg~iiT~~g~~--- 170 (405)
+..++.+++||+++++++|+|++||+|+ ++|+++ |+.+-+.+ . ...+|+||++|||+|+.
T Consensus 611 l~~~~~l~~~Lr~~~~~gK~IaAIC~G~-~lLA~AlGL~~L~~a------------G---a~~VVvDg~lITs~gp~~~~ 674 (715)
T 1sy7_A 611 LSKNGRALHWIREAFGHLKAIGATGEAV-DLVAKAIALPQVTVS------------S---EAEVHESYGVVTLKKVKPES 674 (715)
T ss_dssp HHTCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHHHCCTTSCCC------------C---SSSCEEETTEEEESSCCTTT
T ss_pred hccCHHHHHHHHHHHhCCCEEEEECHHH-HHHHHccCcHhHHhc------------C---CCcEEEeCCEEECCCCcccc
Confidence 7789999999999999999999999964 589999 98322211 1 15799999999999986
Q ss_pred ---------cHHHHHHHHHHHhcC
Q 015523 171 ---------TSFEFALCLVEQLFG 185 (405)
Q Consensus 171 ---------~~~~~~l~ii~~~~g 185 (405)
++.+|+..+++.+..
T Consensus 675 l~~~~~i~~s~~~fa~~fi~~L~~ 698 (715)
T 1sy7_A 675 FTDAVKIAKGAAGFLGEFFYAIAQ 698 (715)
T ss_dssp TTSCCCCSTTCSSHHHHHHHHHHT
T ss_pred cccccccccCHHHHHHHHHHHHHc
Confidence 566788888887654
No 59
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.77 E-value=1.8e-18 Score=174.79 Aligned_cols=148 Identities=12% Similarity=0.107 Sum_probs=125.5
Q ss_pred cChHHHHHHHHhcccccccC----------c--cccccccccccc--cCCcCEEEEEeCCCCcHHHHHHHHHHHHhCCCe
Q 015523 184 FGESVAKEIGELLLMHNADN----------S--LKKEEFNEVEWF--FDRMPRVLIPIANGSEEIEIVTIVDILRRAKVD 249 (405)
Q Consensus 184 ~g~~~a~~~a~~l~~~~~~~----------~--~~~~~~~~~~~~--~~~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~ 249 (405)
..++++++|++.+..+.... . ......++.... .-+.+||+||+.|||++.|+..+++.|+++|+.
T Consensus 550 ~d~~l~~~va~~l~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~ti~grKVaILlaDGfEe~El~~pvdaLr~AG~~ 629 (753)
T 3ttv_A 550 IDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVH 629 (753)
T ss_dssp TCHHHHHHHHHHHTCCCCHHHHTCCCCCCBTTBSCCGGGCSSSSCCCCCTTCEEEEECCTTCCHHHHHHHHHHHHHHTCE
T ss_pred HCHHHHHHHHHHhCCCCCCcccccccCCCCCCCCCCccccccCCCCCCCCCCEEEEEecCCCCHHHHHHHHHHHHHCCCE
Confidence 47788899999888764321 0 012222222221 123489999999999999999999999999999
Q ss_pred EEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHH
Q 015523 250 VVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLH 329 (405)
Q Consensus 250 v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La 329 (405)
|+++|++++ +|+++.|..+.+|..++++++.+||+|+|||| +...++.++.+++||+++++++|+|++||+|+++|+
T Consensus 630 V~vVS~~~g-~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG--g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa 706 (753)
T 3ttv_A 630 AKLLYSRMG-EVTADDGTVLPIAATFAGAPSLTVDAVIVPCG--NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKA 706 (753)
T ss_dssp EEEEESSSS-EEECTTSCEEECCEETTTSCGGGCSEEEECCS--CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGG
T ss_pred EEEEEcCCC-eEEeCCCCEEecccchhhCCCcCCCEEEECCC--ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHH
Confidence 999999998 99999999999999999998888999999999 577889999999999999999999999999999999
Q ss_pred HcCCC
Q 015523 330 KHGLL 334 (405)
Q Consensus 330 ~aGlL 334 (405)
++||-
T Consensus 707 ~AGL~ 711 (753)
T 3ttv_A 707 TIKIA 711 (753)
T ss_dssp GGTCC
T ss_pred HcCCC
Confidence 99984
No 60
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.75 E-value=8.2e-18 Score=170.05 Aligned_cols=114 Identities=13% Similarity=0.101 Sum_probs=107.9
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~ 94 (405)
.+++||+||+.|||++.|+..++++|+++|++|++++++++ +|++++|..+.+|..++++++.+||+|+|||| +...
T Consensus 598 i~grKVaILlaDGfEe~El~~pvdaLr~AG~~V~vVS~~~g-~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG--g~~~ 674 (753)
T 3ttv_A 598 VKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMG-EVTADDGTVLPIAATFAGAPSLTVDAVIVPCG--NIAD 674 (753)
T ss_dssp CTTCEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSS-EEECTTSCEEECCEETTTSCGGGCSEEEECCS--CGGG
T ss_pred CCCCEEEEEecCCCCHHHHHHHHHHHHHCCCEEEEEEcCCC-eEEeCCCCEEecccchhhCCCcCCCEEEECCC--ChHH
Confidence 45689999999999999999999999999999999999998 99999999999999999999889999999999 5777
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCC
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLL 132 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll 132 (405)
++.++.+++||+++++++|+|++||+|++ +|+++|+-
T Consensus 675 Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~-lLa~AGL~ 711 (753)
T 3ttv_A 675 IADNGDANYYLMEAYKHLKPIALAGDARK-FKATIKIA 711 (753)
T ss_dssp TTTCHHHHHHHHHHHHTTCCEEEEGGGGG-GGGGGTCC
T ss_pred hhhCHHHHHHHHHHHhcCCeEEEECchHH-HHHHcCCC
Confidence 89999999999999999999999999876 79999984
No 61
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.65 E-value=8.2e-16 Score=155.21 Aligned_cols=142 Identities=15% Similarity=0.161 Sum_probs=115.5
Q ss_pred cChHHHHHHHHhcccccccCcc------ccccccccccccC--CcCEEEEEeC--CCCcHHHHHHHHHHHHhCCCeEEEE
Q 015523 184 FGESVAKEIGELLLMHNADNSL------KKEEFNEVEWFFD--RMPRVLIPIA--NGSEEIEIVTIVDILRRAKVDVVVA 253 (405)
Q Consensus 184 ~g~~~a~~~a~~l~~~~~~~~~------~~~~~~~~~~~~~--~~~~V~il~~--~g~~~~e~~~~~~~l~~~~~~v~~v 253 (405)
..++++++|++.+..+...... .....++...... ..+||+||+. +||++.|+..+.+.|+++|+.++++
T Consensus 485 ~d~~~~~~v~~~l~~~~p~~~~~~~~~~~~~~ls~~~~~~~~l~g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vV 564 (688)
T 2iuf_A 485 ISDNLATRVASAIGVEAPKPNSSFYHDNTTAHIGAFGEKLAKLDGLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVV 564 (688)
T ss_dssp HCHHHHHHHHTTTTCCCCCCCGGGCCCCCCTTCSSSSSCCSCCTTCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred hCHHHHHHHHHHhCCCCCCCCccCCCCCCCcccccCcCCCCCCCCCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEE
Confidence 4678899999999765322111 1222222222111 2489999999 9999999999999999999999999
Q ss_pred eecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccc----------------hHhhhcChHHHHHHHHHhhcCCE
Q 015523 254 SVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAG----------------AERLQKSRILKKLLKEQKVAGRI 317 (405)
Q Consensus 254 s~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~----------------~~~~~~~~~l~~~l~~~~~~~k~ 317 (405)
+++.+ . .+|.++++.++.+||+|+||||..+ ...+..++.++++|++++++||+
T Consensus 565 s~~~g-~---------~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKp 634 (688)
T 2iuf_A 565 AERXA-N---------NVDETYSASDAVQFDAVVVADGAEGLFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKT 634 (688)
T ss_dssp ESSCC-T---------TCCEESTTCCGGGCSEEEECTTCGGGCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCE
T ss_pred eccCC-c---------ccccchhcCCccccCeEEecCCCcccccccccccccccccchhhcccChHHHHHHHHHHHcCCE
Confidence 99876 2 7888999988899999999999755 56688999999999999999999
Q ss_pred EEEEchHHHHHHHcCCCC
Q 015523 318 YGAVCSSPIVLHKHGLLK 335 (405)
Q Consensus 318 i~aic~g~~~La~aGlL~ 335 (405)
|++||+|+.+|..+|+..
T Consensus 635 IaAIc~ap~vL~~aGi~~ 652 (688)
T 2iuf_A 635 VGALGSGSDALESGQISS 652 (688)
T ss_dssp EEEEGGGHHHHHHTTCCT
T ss_pred EEEECchHHHHHHcCCCC
Confidence 999999999999999854
No 62
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.61 E-value=2.9e-15 Score=151.27 Aligned_cols=130 Identities=15% Similarity=0.103 Sum_probs=111.0
Q ss_pred CCCcEEEEEec--CCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchh-
Q 015523 15 SFALNVLVPVG--FGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPG- 91 (405)
Q Consensus 15 ~~~~ki~ill~--~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~- 91 (405)
..++||+||+. +||++.|+..+.+.|+++|+++.++++..+ . .+|.++++.++.+||+||||||..+
T Consensus 527 l~g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vVs~~~g-~---------~vD~t~~~~~s~~fDAVvlPGG~~g~ 596 (688)
T 2iuf_A 527 LDGLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVVAERXA-N---------NVDETYSASDAVQFDAVVVADGAEGL 596 (688)
T ss_dssp CTTCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEEESSCC-T---------TCCEESTTCCGGGCSEEEECTTCGGG
T ss_pred CCCCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEEeccCC-c---------ccccchhcCCccccCeEEecCCCccc
Confidence 45689999999 999999999999999999999999999875 2 8889999988889999999999755
Q ss_pred ---------------hhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCCCccccCc
Q 015523 92 ---------------SVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPTFWAVKSN 156 (405)
Q Consensus 92 ---------------~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~ 156 (405)
...+..++.++++|+++++++|+|++||+|++ +|..+|+..
T Consensus 597 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~-vL~~aGi~~----------------------- 652 (688)
T 2iuf_A 597 FGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSD-ALESGQISS----------------------- 652 (688)
T ss_dssp CCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHH-HHHHTTCCT-----------------------
T ss_pred ccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHH-HHHHcCCCC-----------------------
Confidence 66788899999999999999999999999988 799999853
Q ss_pred EEEeCCeEcCCCcccHHHHHHHHHHH
Q 015523 157 IHVSGEVTTSRGPGTSFEFALCLVEQ 182 (405)
Q Consensus 157 ~v~dg~iiT~~g~~~~~~~~l~ii~~ 182 (405)
.|++++|+.++ .-+++-.+++.
T Consensus 653 --~d~GVvts~~~--~~~f~~~fi~~ 674 (688)
T 2iuf_A 653 --ERQGVYTGKNA--GDAFAKDIKSG 674 (688)
T ss_dssp --TSTTEEEESSS--SHHHHHHHHHH
T ss_pred --CCCCEEEcCCc--cHHHHHHHHHH
Confidence 35778888776 23345555544
No 63
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.60 E-value=8.2e-15 Score=147.49 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=115.1
Q ss_pred cChHHHHHHHHhcccccccCcc------cccccccccc--ccCCcCEEEEEeCCC-CcHHHHHHHHHHHHhCCCeEEEEe
Q 015523 184 FGESVAKEIGELLLMHNADNSL------KKEEFNEVEW--FFDRMPRVLIPIANG-SEEIEIVTIVDILRRAKVDVVVAS 254 (405)
Q Consensus 184 ~g~~~a~~~a~~l~~~~~~~~~------~~~~~~~~~~--~~~~~~~V~il~~~g-~~~~e~~~~~~~l~~~~~~v~~vs 254 (405)
..++++++|++.+..+...... .....+++.. +.-+.+||+||+.|| |++.|+..+.+.|+++|+.+++++
T Consensus 493 ~d~~~~~~va~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~l~grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVs 572 (688)
T 3ej6_A 493 ISNDVAKRVAVALGLEAPQPDPTYYHNNVTRGVSIFNESLPTIATLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIA 572 (688)
T ss_dssp HCHHHHHHHHHHHTSCCCSCCTTSCCCCCCSSCCSSSSCCSCCTTCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hCHHHHHHHHHHhCCCCCCCCCCCCCCCCCcccccccCCCCCccCCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEe
Confidence 4678888999988876433211 2223332211 122458999999999 999999999999999999999999
Q ss_pred ecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccch-------HhhhcChHHHHHHHHHhhcCCEEEEEchHHHH
Q 015523 255 VERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGA-------ERLQKSRILKKLLKEQKVAGRIYGAVCSSPIV 327 (405)
Q Consensus 255 ~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~-------~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~ 327 (405)
++.+ .| +|.++++.++.+||+|+||||..+. ..++.++.++++|+++++++|+|++||+|+++
T Consensus 573 p~~g------~G----vD~t~~~~~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~l 642 (688)
T 3ej6_A 573 EYLA------SG----VDQTYSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKA 642 (688)
T ss_dssp SSCC------TT----CCEETTTCCGGGCSEEEECTTCCTTTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHH
T ss_pred CCCC------CC----cccCcccCChhcCcEEEECCCcccccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHH
Confidence 9886 24 7999999999999999999997542 56888999999999999999999999999999
Q ss_pred HHHcCCC
Q 015523 328 LHKHGLL 334 (405)
Q Consensus 328 La~aGlL 334 (405)
|..+|+-
T Consensus 643 L~~AGI~ 649 (688)
T 3ej6_A 643 LQSIGVE 649 (688)
T ss_dssp HHHTTCC
T ss_pred HHHcCCC
Confidence 9999984
No 64
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.54 E-value=2.2e-14 Score=144.43 Aligned_cols=107 Identities=20% Similarity=0.144 Sum_probs=96.8
Q ss_pred CCCcEEEEEecCC-CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchh--
Q 015523 15 SFALNVLVPVGFG-TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPG-- 91 (405)
Q Consensus 15 ~~~~ki~ill~~g-~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~-- 91 (405)
.+++||+||+.|| |++.|+..+.+.|+++|+.+++++++.+ .| +|.+++++++.+||+|+||||..+
T Consensus 535 l~grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVsp~~g------~G----vD~t~~~~~s~~fDAVvlPGG~~~~~ 604 (688)
T 3ej6_A 535 IATLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIAEYLA------SG----VDQTYSAADATAFDAVVVAEGAERVF 604 (688)
T ss_dssp CTTCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEESSCC------TT----CCEETTTCCGGGCSEEEECTTCCTTT
T ss_pred ccCCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEeCCCC------CC----cccCcccCChhcCcEEEECCCccccc
Confidence 4678999999999 9999999999999999999999999886 24 799999999999999999999644
Q ss_pred -----hhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCC
Q 015523 92 -----SVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLL 132 (405)
Q Consensus 92 -----~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll 132 (405)
++.++.++.+++|++++++++|+|++||+|++ +|.++|+-
T Consensus 605 ~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~-lL~~AGI~ 649 (688)
T 3ej6_A 605 SGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKK-ALQSIGVE 649 (688)
T ss_dssp STTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHH-HHHHTTCC
T ss_pred ccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHH-HHHHcCCC
Confidence 26688899999999999999999999999887 79999973
No 65
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.09 E-value=1.4e-10 Score=102.94 Aligned_cols=95 Identities=21% Similarity=0.343 Sum_probs=76.2
Q ss_pred CcCEEEEEeCCCCcH-HHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 219 RMPRVLIPIANGSEE-IEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 219 ~~~~V~il~~~g~~~-~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
+|+||+|+.++++.. .+ +.+.|+++|+++.+++.. ++ ..++|+||+|||......
T Consensus 1 m~~~i~il~~~~~~~~~~---~~~~l~~~g~~~~~~~~~-------------------~~--~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 1 MKPRACVVVYPGSNCDRD---AYHALEINGFEPSYVGLD-------------------DK--LDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CCCEEEEECCTTEEEHHH---HHHHHHTTTCEEEEECTT-------------------CC--CSSCSEEEECEECGGGGC
T ss_pred CCcEEEEEEcCCCCccHH---HHHHHHHCCCEEEEEecC-------------------CC--cccCCEEEECCCCchhhh
Confidence 368999999999874 54 489999999999888532 12 257999999998632222
Q ss_pred -----hhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCC
Q 015523 298 -----LQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAK 337 (405)
Q Consensus 298 -----~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~ 337 (405)
...+..+.++|+++.+++++|.+||.|..+|+.+|+|+|+
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~ 101 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGA 101 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSE
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCC
Confidence 2345678999999999999999999999999999999884
No 66
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=98.92 E-value=2.1e-09 Score=95.24 Aligned_cols=94 Identities=23% Similarity=0.297 Sum_probs=73.5
Q ss_pred CcEEEEEecCCCch-hhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc-
Q 015523 17 ALNVLVPVGFGTEE-MEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR- 94 (405)
Q Consensus 17 ~~ki~ill~~g~~~-~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~- 94 (405)
++||+|+.+++++. .+ +.+.|+++|+++.++++. ++. .++|+||+|||......
T Consensus 2 ~~~i~il~~~~~~~~~~---~~~~l~~~g~~~~~~~~~-------------------~~~--~~~d~lil~Gg~~~~~~~ 57 (213)
T 3d54_D 2 KPRACVVVYPGSNCDRD---AYHALEINGFEPSYVGLD-------------------DKL--DDYELIILPGGFSYGDYL 57 (213)
T ss_dssp CCEEEEECCTTEEEHHH---HHHHHHTTTCEEEEECTT-------------------CCC--SSCSEEEECEECGGGGCS
T ss_pred CcEEEEEEcCCCCccHH---HHHHHHHCCCEEEEEecC-------------------CCc--ccCCEEEECCCCchhhhh
Confidence 57999999999885 44 489999999999888642 122 36999999999532222
Q ss_pred ----cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCc
Q 015523 95 ----LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRK 135 (405)
Q Consensus 95 ----~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~ 135 (405)
+..+..+.++|+++.++++||.+||.| ..+|+.+|+|+|+
T Consensus 58 ~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G-~qlLa~aGll~g~ 101 (213)
T 3d54_D 58 RPGAVAAREKIAFEIAKAAERGKLIMGICNG-FQILIEMGLLKGA 101 (213)
T ss_dssp STTHHHHTSTTHHHHHHHHHHTCEEEECHHH-HHHHHHHTSSCSE
T ss_pred ccccccccHHHHHHHHHHHHCCCEEEEECHH-HHHHHHcCCCCCC
Confidence 123567899999999999999999996 5589999999883
No 67
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=98.27 E-value=1.1e-06 Score=76.48 Aligned_cols=87 Identities=22% Similarity=0.265 Sum_probs=62.7
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH-hh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE-RL 298 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~-~~ 298 (405)
|+||+|+-+.+ +..+ ..+.|++.|+++.++++. +++ .++|+|++|||..... .+
T Consensus 1 ~m~I~il~~~~-~~~~---~~~~l~~~g~~~~~~~~~-------------------~~l--~~~d~iil~GG~~~~~~~~ 55 (196)
T 2nv0_A 1 MLTIGVLGLQG-AVRE---HIHAIEACGAAGLVVKRP-------------------EQL--NEVDGLILPGGESTTMRRL 55 (196)
T ss_dssp CCEEEEECSSS-CCHH---HHHHHHHTTCEEEEECSG-------------------GGG--GGCSEEEECCSCHHHHHHH
T ss_pred CcEEEEEEccC-CcHH---HHHHHHHCCCEEEEeCCh-------------------HHH--hhCCEEEECCCChhhHHHH
Confidence 47899996532 2222 248888999988877431 123 5689999999964332 23
Q ss_pred hcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 299 QKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 299 ~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
..+..+.++|+++.+++++|.+||.|..+|+.+
T Consensus 56 ~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~ 88 (196)
T 2nv0_A 56 IDTYQFMEPLREFAAQGKPMFGTCAGLIILAKE 88 (196)
T ss_dssp HHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBC
T ss_pred hhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHH
Confidence 334556889999999999999999999999874
No 68
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=98.21 E-value=1.6e-06 Score=76.95 Aligned_cols=87 Identities=23% Similarity=0.271 Sum_probs=64.1
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH-hh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE-RL 298 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~-~~ 298 (405)
.++|+|+.+.+. ..+ ..+.|+++|+++.+++.. +++ .++|+|++|||..... .+
T Consensus 23 ~~~I~il~~~~~-~~~---~~~~l~~~G~~~~~~~~~-------------------~~l--~~~Dglil~GG~~~~~~~~ 77 (219)
T 1q7r_A 23 NMKIGVLGLQGA-VRE---HVRAIEACGAEAVIVKKS-------------------EQL--EGLDGLVLPGGESTTMRRL 77 (219)
T ss_dssp CCEEEEESCGGG-CHH---HHHHHHHTTCEEEEECSG-------------------GGG--TTCSEEEECCCCHHHHHHH
T ss_pred CCEEEEEeCCCC-cHH---HHHHHHHCCCEEEEECCH-------------------HHH--hhCCEEEECCCChHHHHHH
Confidence 478999977552 122 458889999988877531 123 5799999999964322 23
Q ss_pred hcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 299 QKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 299 ~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
..+..+.++|+++.++++||.+||.|..+|+.+
T Consensus 78 ~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~ 110 (219)
T 1q7r_A 78 IDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKR 110 (219)
T ss_dssp HHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEE
T ss_pred hhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHH
Confidence 334556799999999999999999999999864
No 69
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=98.12 E-value=3.2e-06 Score=74.25 Aligned_cols=88 Identities=23% Similarity=0.327 Sum_probs=63.1
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH-h
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE-R 297 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~-~ 297 (405)
+.+||+|+-+.+ + +....+.|++.|+++.+++.. +++ .++|+|++|||..... .
T Consensus 19 ~~~~I~ii~~~~-~---~~~~~~~l~~~g~~~~~~~~~-------------------~~l--~~~d~iil~GG~~~~~~~ 73 (208)
T 2iss_D 19 SHMKIGVLGVQG-D---VREHVEALHKLGVETLIVKLP-------------------EQL--DMVDGLILPGGESTTMIR 73 (208)
T ss_dssp -CCEEEEECSSS-C---HHHHHHHHHHTTCEEEEECSG-------------------GGG--GGCSEEEECSSCHHHHHH
T ss_pred CCcEEEEEECCC-c---hHHHHHHHHHCCCEEEEeCCh-------------------HHH--hhCCEEEECCCcHHHHHh
Confidence 457999997643 3 344677888899888877421 123 4689999999963222 1
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
+..+..+.++|+++.+++++|.+||.|..+|+.+
T Consensus 74 ~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~ 107 (208)
T 2iss_D 74 ILKEMDMDEKLVERINNGLPVFATCAGVILLAKR 107 (208)
T ss_dssp HHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEE
T ss_pred hhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHH
Confidence 2223446889999999999999999999999875
No 70
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=98.12 E-value=1.4e-05 Score=71.53 Aligned_cols=94 Identities=18% Similarity=0.224 Sum_probs=68.8
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhc
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQK 300 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~ 300 (405)
|||++|..+.++... .+.+.|...|++++++....+ . .+.+ +..++|+|||+||...+.....
T Consensus 1 m~i~vi~h~~~e~~g--~~~~~l~~~g~~~~~~~~~~~-~-------------~~p~-~~~~~d~lii~GGp~~~~~~~~ 63 (236)
T 3l7n_A 1 MRIHFILHETFEAPG--AYLAWAALRGHDVSMTKVYRY-E-------------KLPK-DIDDFDMLILMGGPQSPSSTKK 63 (236)
T ss_dssp CEEEEEECCTTSCCH--HHHHHHHHTTCEEEEEEGGGT-C-------------CCCS-CGGGCSEEEECCCSSCTTCCTT
T ss_pred CeEEEEeCCCCCCch--HHHHHHHHCCCeEEEEeeeCC-C-------------CCCC-CccccCEEEECCCCCCcccccc
Confidence 588899877665544 345678889999999987654 1 1111 1257999999999754321111
Q ss_pred ----C--hHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 301 ----S--RILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 301 ----~--~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
- ....++|+++.+.+++|.+||-|..+|+.+
T Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~ 100 (236)
T 3l7n_A 64 EFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVA 100 (236)
T ss_dssp TCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHH
T ss_pred cCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHH
Confidence 1 347899999999999999999999999875
No 71
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=98.11 E-value=8.8e-06 Score=73.39 Aligned_cols=95 Identities=19% Similarity=0.171 Sum_probs=69.8
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh-h
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER-L 298 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~-~ 298 (405)
+++|.||..+.+...+. +...|.+.|++++++....+.+. .++. .++|.||||||...... .
T Consensus 3 ~~~vliiqh~~~e~~~~--i~~~l~~~G~~v~v~~~~~~~~~-------------p~~~--~~~d~lIl~GGp~~~~d~~ 65 (250)
T 3m3p_A 3 LKPVMIIQFSASEGPGH--FGDFLAGEHIPFQVLRMDRSDPL-------------PAEI--RDCSGLAMMGGPMSANDDL 65 (250)
T ss_dssp CCCEEEEESSSSCCCHH--HHHHHHHTTCCEEEEEGGGTCCC-------------CSCG--GGSSEEEECCCSSCTTSCC
T ss_pred CCeEEEEECCCCCCHHH--HHHHHHHCCCeEEEEeccCCCcC-------------cCcc--ccCCEEEECCCCCcccccc
Confidence 46899998777655554 45568899999999987654111 1223 67999999999643321 2
Q ss_pred hcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 299 QKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 299 ~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
.....+.++|+++.+.+++|.+||-|..+|+.+
T Consensus 66 ~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~ 98 (250)
T 3m3p_A 66 PWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKA 98 (250)
T ss_dssp TTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 223567899999999999999999999999876
No 72
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=98.07 E-value=5.3e-06 Score=73.48 Aligned_cols=88 Identities=20% Similarity=0.162 Sum_probs=61.7
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh-c
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV-R 94 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~-~ 94 (405)
..+||+|+.+++ .+....+.|+++|+++.++++. ++++ ++|.||+|||..... .
T Consensus 22 ~~~~I~il~~~~----~~~~~~~~l~~~G~~~~~~~~~-------------------~~l~--~~Dglil~GG~~~~~~~ 76 (219)
T 1q7r_A 22 SNMKIGVLGLQG----AVREHVRAIEACGAEAVIVKKS-------------------EQLE--GLDGLVLPGGESTTMRR 76 (219)
T ss_dssp CCCEEEEESCGG----GCHHHHHHHHHTTCEEEEECSG-------------------GGGT--TCSEEEECCCCHHHHHH
T ss_pred CCCEEEEEeCCC----CcHHHHHHHHHCCCEEEEECCH-------------------HHHh--hCCEEEECCCChHHHHH
Confidence 357899997654 1223468889999988887531 1232 699999999953221 2
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
+..+..+.++|+++.++++||.+||.|.. +|+.+
T Consensus 77 ~~~~~~~~~~i~~~~~~~~PilGIC~G~Q-lL~~~ 110 (219)
T 1q7r_A 77 LIDRYGLMEPLKQFAAAGKPMFGTCAGLI-LLAKR 110 (219)
T ss_dssp HHHHTTCHHHHHHHHHTTCCEEEETTHHH-HHEEE
T ss_pred HhhhhHHHHHHHHHHHcCCeEEEECHHHH-HHHHH
Confidence 22244567899999999999999999766 67753
No 73
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=98.03 E-value=8.3e-06 Score=70.84 Aligned_cols=86 Identities=21% Similarity=0.169 Sum_probs=59.5
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhh-hcc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGS-VRL 95 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~-~~~ 95 (405)
||||+|+-+.+ +..+ ..+.|++.|+++.++++. ++. .++|.|++|||.+.. ..+
T Consensus 1 ~m~I~il~~~~-~~~~---~~~~l~~~g~~~~~~~~~-------------------~~l--~~~d~iil~GG~~~~~~~~ 55 (196)
T 2nv0_A 1 MLTIGVLGLQG-AVRE---HIHAIEACGAAGLVVKRP-------------------EQL--NEVDGLILPGGESTTMRRL 55 (196)
T ss_dssp CCEEEEECSSS-CCHH---HHHHHHHTTCEEEEECSG-------------------GGG--GGCSEEEECCSCHHHHHHH
T ss_pred CcEEEEEEccC-CcHH---HHHHHHHCCCEEEEeCCh-------------------HHH--hhCCEEEECCCChhhHHHH
Confidence 46899996522 2222 358889999988877431 122 269999999995332 222
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEccchHHhhhh
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICAAPAVTLLP 128 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ 128 (405)
.....+.++|+++.++++||.+||.|.. +|+.
T Consensus 56 ~~~~~~~~~i~~~~~~~~pilgIC~G~q-~l~~ 87 (196)
T 2nv0_A 56 IDTYQFMEPLREFAAQGKPMFGTCAGLI-ILAK 87 (196)
T ss_dssp HHHTTCHHHHHHHHHTTCCEEEETHHHH-HHSB
T ss_pred hhhHHHHHHHHHHHHCCCcEEEECHHHH-HHHH
Confidence 2334567899999999999999999765 5765
No 74
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.01 E-value=7.3e-05 Score=81.51 Aligned_cols=101 Identities=12% Similarity=0.214 Sum_probs=74.9
Q ss_pred CcCEEEEEeCCCCc-HHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH-
Q 015523 219 RMPRVLIPIANGSE-EIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE- 296 (405)
Q Consensus 219 ~~~~V~il~~~g~~-~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~- 296 (405)
..+||+|+.|+|.+ +.|+. ..|+++|+.+.++..+. . .. .-.++ .++|.|++|||....+
T Consensus 1046 ~~pkVaIi~~~G~N~~~~~~---~A~~~aG~~~~~v~~~d--l---------~~--~~~~l--~~~d~lvlPGGfSygD~ 1107 (1303)
T 3ugj_A 1046 ARPKVAVLREQGVNSHVEMA---AAFHRAGFDAIDVHMSD--L---------LG--GRIGL--GNFHALVACGGFSYGDV 1107 (1303)
T ss_dssp CCCEEEEEECTTCCCHHHHH---HHHHHTTCEEEEEEHHH--H---------HT--TSCCG--GGCSEEEECCSCGGGGT
T ss_pred CCCEEEEEecCCcCCHHHHH---HHHHHhCCceEEEeecc--c---------cc--CcccH--hhCCEEEECCCCcchhh
Confidence 46899999999875 57755 46667899988875421 0 00 00223 5799999999964222
Q ss_pred ---------hhhcChHHHHHHHHHh-hcCCEEEEEchHHHHHHHc-CCCCCC
Q 015523 297 ---------RLQKSRILKKLLKEQK-VAGRIYGAVCSSPIVLHKH-GLLKAK 337 (405)
Q Consensus 297 ---------~~~~~~~l~~~l~~~~-~~~k~i~aic~g~~~La~a-GlL~g~ 337 (405)
....++.+.+.|++++ ++++++.+||+|..+|.++ |||.|.
T Consensus 1108 l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1108 LGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIPGS 1159 (1303)
T ss_dssp TSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHHTTGGGSTTC
T ss_pred hccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHHHhcCcCCCC
Confidence 2345678888899865 6899999999999999999 999986
No 75
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=98.00 E-value=1.2e-05 Score=70.04 Aligned_cols=88 Identities=17% Similarity=0.147 Sum_probs=61.8
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhh-
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERL- 298 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~- 298 (405)
++||+|+-+..-+..+ +.+.|++.|+++.+++.. +++ .++|.|++|||.......
T Consensus 2 ~~~I~iid~~~~~~~~---~~~~l~~~G~~~~~~~~~-------------------~~l--~~~d~lil~G~g~~~~~~~ 57 (200)
T 1ka9_H 2 RMKALLIDYGSGNLRS---AAKALEAAGFSVAVAQDP-------------------KAH--EEADLLVLPGQGHFGQVMR 57 (200)
T ss_dssp -CEEEEECSSCSCHHH---HHHHHHHTTCEEEEESST-------------------TSC--SSCSEEEECCCSCHHHHHH
T ss_pred ccEEEEEeCCCccHHH---HHHHHHHCCCeEEEecCh-------------------HHc--ccCCEEEECCCCcHHHHHH
Confidence 4689888543223333 578999999988877421 123 579999999943111211
Q ss_pred -hcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 299 -QKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 299 -~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
..+..+.++|+++.++++||.+||.|..+|+.+
T Consensus 58 ~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~ 91 (200)
T 1ka9_H 58 AFQESGFVERVRRHLERGLPFLGICVGMQVLYEG 91 (200)
T ss_dssp TTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSE
T ss_pred HHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHh
Confidence 122457899999999999999999999999998
No 76
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.99 E-value=8.5e-06 Score=70.43 Aligned_cols=87 Identities=16% Similarity=0.234 Sum_probs=64.1
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccc-hHhh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAG-AERL 298 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~-~~~~ 298 (405)
+++|+|+..+| .+....+.|++.|+++.+++.. +++ .++|.|++|||... ...+
T Consensus 2 ~p~Igi~~~~~----~~~~~~~~l~~~G~~~~~~~~~-------------------~~l--~~~dglil~GG~~~~~~~~ 56 (191)
T 2ywd_A 2 RGVVGVLALQG----DFREHKEALKRLGIEAKEVRKK-------------------EHL--EGLKALIVPGGESTTIGKL 56 (191)
T ss_dssp -CCEEEECSSS----CHHHHHHHHHTTTCCCEEECSG-------------------GGG--TTCSEEEECSSCHHHHHHH
T ss_pred CcEEEEEecCC----chHHHHHHHHHCCCEEEEeCCh-------------------hhh--ccCCEEEECCCChhhhHHh
Confidence 47899998765 2345788999999888776421 122 46899999999522 2223
Q ss_pred hcChHHHHHHHHHhhcC-CEEEEEchHHHHHHHc
Q 015523 299 QKSRILKKLLKEQKVAG-RIYGAVCSSPIVLHKH 331 (405)
Q Consensus 299 ~~~~~l~~~l~~~~~~~-k~i~aic~g~~~La~a 331 (405)
..+..+.++|+++.+++ +||.+||.|..+|+.+
T Consensus 57 ~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~ 90 (191)
T 2ywd_A 57 AREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKE 90 (191)
T ss_dssp HHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEE
T ss_pred hhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHH
Confidence 32456789999999999 9999999999999875
No 77
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=97.97 E-value=9.3e-06 Score=71.27 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=61.0
Q ss_pred CCCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh
Q 015523 14 PSFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV 93 (405)
Q Consensus 14 ~~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~ 93 (405)
+.+++||+|+-+++ .+....+.|++.|+++.++++.. +++ ++|+||+|||.+...
T Consensus 17 ~~~~~~I~ii~~~~----~~~~~~~~l~~~g~~~~~~~~~~-------------------~l~--~~d~iil~GG~~~~~ 71 (208)
T 2iss_D 17 RGSHMKIGVLGVQG----DVREHVEALHKLGVETLIVKLPE-------------------QLD--MVDGLILPGGESTTM 71 (208)
T ss_dssp ---CCEEEEECSSS----CHHHHHHHHHHTTCEEEEECSGG-------------------GGG--GCSEEEECSSCHHHH
T ss_pred CCCCcEEEEEECCC----chHHHHHHHHHCCCEEEEeCChH-------------------HHh--hCCEEEECCCcHHHH
Confidence 34567999996633 44556788888898888774221 122 689999999953221
Q ss_pred -ccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 94 -RLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 94 -~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
.+..+..+.++|+++.++++||.+||.|.. +|+.+
T Consensus 72 ~~~~~~~~~~~~i~~~~~~g~PilGIC~G~Q-lL~~~ 107 (208)
T 2iss_D 72 IRILKEMDMDEKLVERINNGLPVFATCAGVI-LLAKR 107 (208)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCEEEETHHHH-HHEEE
T ss_pred HhhhhhhhHHHHHHHHHHCCCeEEEECHHHH-HHHHH
Confidence 122234467899999999999999999765 57753
No 78
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=97.89 E-value=6.3e-05 Score=67.28 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=65.8
Q ss_pred cEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcccc
Q 015523 18 LNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLRD 97 (405)
Q Consensus 18 ~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~ 97 (405)
|||.+|..+.++... .+.+++++.|++++++....+. .+.+ +..+||+|||+||...+.....
T Consensus 1 m~i~vi~h~~~e~~g--~~~~~l~~~g~~~~~~~~~~~~--------------~~p~-~~~~~d~lii~GGp~~~~~~~~ 63 (236)
T 3l7n_A 1 MRIHFILHETFEAPG--AYLAWAALRGHDVSMTKVYRYE--------------KLPK-DIDDFDMLILMGGPQSPSSTKK 63 (236)
T ss_dssp CEEEEEECCTTSCCH--HHHHHHHHTTCEEEEEEGGGTC--------------CCCS-CGGGCSEEEECCCSSCTTCCTT
T ss_pred CeEEEEeCCCCCCch--HHHHHHHHCCCeEEEEeeeCCC--------------CCCC-CccccCEEEECCCCCCcccccc
Confidence 589999877666544 4557788999999999876541 1111 1237999999999432221111
Q ss_pred C------hHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 98 C------EILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 98 ~------~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
+ ....++|+++++.++||.+||-|.. +|+.+
T Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~Q-lL~~~ 100 (236)
T 3l7n_A 64 EFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQ-LMGVA 100 (236)
T ss_dssp TCTTCCHHHHHHHHHHHHHTTCEEEEETHHHH-HHHHH
T ss_pred cCcccchHHHHHHHHHHHHcCCCEEEEchHHH-HHHHH
Confidence 1 3478999999999999999999765 57764
No 79
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=97.85 E-value=3.3e-05 Score=67.26 Aligned_cols=88 Identities=17% Similarity=0.084 Sum_probs=59.6
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc-
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL- 95 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~- 95 (405)
+|||+|+-+. ...+..+.+.|++.|+++.+++.. +++ .++|.||+||+.......
T Consensus 2 ~~~I~iid~~---~~~~~~~~~~l~~~G~~~~~~~~~-------------------~~l--~~~d~lil~G~g~~~~~~~ 57 (200)
T 1ka9_H 2 RMKALLIDYG---SGNLRSAAKALEAAGFSVAVAQDP-------------------KAH--EEADLLVLPGQGHFGQVMR 57 (200)
T ss_dssp -CEEEEECSS---CSCHHHHHHHHHHTTCEEEEESST-------------------TSC--SSCSEEEECCCSCHHHHHH
T ss_pred ccEEEEEeCC---CccHHHHHHHHHHCCCeEEEecCh-------------------HHc--ccCCEEEECCCCcHHHHHH
Confidence 3689888443 223344589999999988887421 122 269999999942211111
Q ss_pred -ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 96 -RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 96 -~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
..+..+.++|+++.++++||.+||.|.. +|+.+
T Consensus 58 ~l~~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~~ 91 (200)
T 1ka9_H 58 AFQESGFVERVRRHLERGLPFLGICVGMQ-VLYEG 91 (200)
T ss_dssp TTSSSCTHHHHHHHHHTTCCEEECTHHHH-TTSSE
T ss_pred HHHhcCHHHHHHHHHHcCCeEEEEcHHHH-HHHHh
Confidence 1124578999999999999999999765 68876
No 80
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=97.82 E-value=3.8e-05 Score=66.24 Aligned_cols=86 Identities=17% Similarity=0.187 Sum_probs=62.1
Q ss_pred EEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcCh
Q 015523 223 VLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSR 302 (405)
Q Consensus 223 V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~ 302 (405)
|+|+=+.+.. ...+.+.|+++|+++.++..+. .++++...++|.|++|||. .+. +..
T Consensus 3 i~iid~~~~~---~~~~~~~l~~~G~~~~~~~~~~----------------~~~~~~~~~~dglil~Gg~-~~~---~~~ 59 (189)
T 1wl8_A 3 IVIMDNGGQY---VHRIWRTLRYLGVETKIIPNTT----------------PLEEIKAMNPKGIIFSGGP-SLE---NTG 59 (189)
T ss_dssp EEEEECSCTT---HHHHHHHHHHTTCEEEEEETTC----------------CHHHHHHTCCSEEEECCCS-CTT---CCT
T ss_pred EEEEECCCch---HHHHHHHHHHCCCeEEEEECCC----------------ChHHhcccCCCEEEECCCC-Chh---hhh
Confidence 7777555444 3467788899999988876432 1223211469999999995 332 245
Q ss_pred HHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 303 ILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 303 ~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
.+.++++++.+.+++|.+||.|..+|+.+
T Consensus 60 ~~~~~i~~~~~~~~PilGIC~G~Q~l~~~ 88 (189)
T 1wl8_A 60 NCEKVLEHYDEFNVPILGICLGHQLIAKF 88 (189)
T ss_dssp THHHHHHTGGGTCSCEEEETHHHHHHHHH
T ss_pred hHHHHHHHHhhCCCeEEEEcHHHHHHHHH
Confidence 56888987778999999999999999875
No 81
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.75 E-value=3.5e-05 Score=66.45 Aligned_cols=86 Identities=19% Similarity=0.099 Sum_probs=61.4
Q ss_pred cEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchh-hhccc
Q 015523 18 LNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPG-SVRLR 96 (405)
Q Consensus 18 ~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~-~~~~~ 96 (405)
++|+|+..++ .+....+.|++.|+++.++.... +.+ ++|.|++|||.+. ...+.
T Consensus 3 p~Igi~~~~~----~~~~~~~~l~~~G~~~~~~~~~~-------------------~l~--~~dglil~GG~~~~~~~~~ 57 (191)
T 2ywd_A 3 GVVGVLALQG----DFREHKEALKRLGIEAKEVRKKE-------------------HLE--GLKALIVPGGESTTIGKLA 57 (191)
T ss_dssp CCEEEECSSS----CHHHHHHHHHTTTCCCEEECSGG-------------------GGT--TCSEEEECSSCHHHHHHHH
T ss_pred cEEEEEecCC----chHHHHHHHHHCCCEEEEeCChh-------------------hhc--cCCEEEECCCChhhhHHhh
Confidence 5899998764 34567899999998877764211 222 5899999999422 22232
Q ss_pred cChHHHHHHHHHHHcC-CEEEEEccchHHhhhhc
Q 015523 97 DCEILKKITSKQAEEK-RLYGAICAAPAVTLLPW 129 (405)
Q Consensus 97 ~~~~~~~~l~~~~~~~-~~i~aic~g~~~~La~a 129 (405)
.+..+.++|+++.+++ +||.+||.|.. +|+.+
T Consensus 58 ~~~~~~~~i~~~~~~~~~PilGiC~G~Q-~l~~~ 90 (191)
T 2ywd_A 58 REYGIEDEVRKRVEEGSLALFGTCAGAI-WLAKE 90 (191)
T ss_dssp HHTTHHHHHHHHHHTTCCEEEEETHHHH-HHEEE
T ss_pred hhhhHHHHHHHHHHCCCCeEEEECHHHH-HHHHH
Confidence 2356788999999999 99999999755 57753
No 82
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=97.74 E-value=8e-05 Score=81.22 Aligned_cols=101 Identities=14% Similarity=0.095 Sum_probs=72.0
Q ss_pred CcEEEEEecCCCch-hhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 17 ALNVLVPVGFGTEE-MEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 17 ~~ki~ill~~g~~~-~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
.+||+|+.|+|.+- .++ ...|+++|+++.++..+.- ..+ -.++ .+||.|++|||....+.+
T Consensus 1047 ~pkVaIi~~~G~N~~~~~---~~A~~~aG~~~~~v~~~dl-----------~~~--~~~l--~~~d~lvlPGGfSygD~l 1108 (1303)
T 3ugj_A 1047 RPKVAVLREQGVNSHVEM---AAAFHRAGFDAIDVHMSDL-----------LGG--RIGL--GNFHALVACGGFSYGDVL 1108 (1303)
T ss_dssp CCEEEEEECTTCCCHHHH---HHHHHHTTCEEEEEEHHHH-----------HTT--SCCG--GGCSEEEECCSCGGGGTT
T ss_pred CCEEEEEecCCcCCHHHH---HHHHHHhCCceEEEeeccc-----------ccC--cccH--hhCCEEEECCCCcchhhh
Confidence 45999999999885 665 5677788999988754210 000 0122 379999999995333322
Q ss_pred ----------ccChHHHHHHHHHH-HcCCEEEEEccchHHhhhhc-CCCCCcc
Q 015523 96 ----------RDCEILKKITSKQA-EEKRLYGAICAAPAVTLLPW-GLLRRKQ 136 (405)
Q Consensus 96 ----------~~~~~~~~~l~~~~-~~~~~i~aic~g~~~~La~a-gll~g~~ 136 (405)
..++.+.+.+++++ ++++++.+||+|.+ +|.++ |+|.|..
T Consensus 1109 ~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~Q-lL~e~~gllPg~~ 1160 (1303)
T 3ugj_A 1109 GAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQ-MMSNLRELIPGSE 1160 (1303)
T ss_dssp STTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHH-HHHTTGGGSTTCT
T ss_pred ccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHH-HHHHhcCcCCCCC
Confidence 34567778888866 57999999999776 79998 9999863
No 83
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=97.71 E-value=5.3e-05 Score=65.65 Aligned_cols=90 Identities=17% Similarity=0.093 Sum_probs=60.2
Q ss_pred EEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcCh
Q 015523 223 VLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSR 302 (405)
Q Consensus 223 V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~ 302 (405)
|+|+=..+.. ...+.+.|++.|+++.++..+.. .+++++..++|.|+++||........+.+
T Consensus 4 i~iid~~~s~---~~~~~~~l~~~G~~~~v~~~~~~---------------~~~~~~~~~~dglil~gG~~~~~~~~~~~ 65 (195)
T 1qdl_B 4 TLIIDNYDSF---VYNIAQIVGELGSYPIVIRNDEI---------------SIKGIERIDPDRLIISPGPGTPEKREDIG 65 (195)
T ss_dssp EEEEECSCSS---HHHHHHHHHHTTCEEEEEETTTS---------------CHHHHHHHCCSEEEECCCSSCTTSHHHHT
T ss_pred EEEEECCCch---HHHHHHHHHhCCCEEEEEeCCCC---------------CHHHHhhCCCCEEEECCCCCChhhhhhhh
Confidence 7777543333 23678899999999988765421 22333212689999988754333221123
Q ss_pred HHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 303 ILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 303 ~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
...++++++ +.++||.+||.|..+|+.+
T Consensus 66 ~~~~~i~~~-~~~~PvLGIC~G~QlL~~~ 93 (195)
T 1qdl_B 66 VSLDVIKYL-GKRTPILGVCLGHQAIGYA 93 (195)
T ss_dssp THHHHHHHH-TTTSCEEEETHHHHHHHHH
T ss_pred HHHHHHHHh-cCCCcEEEEehHHHHHHHH
Confidence 356888875 7899999999999999985
No 84
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=97.70 E-value=0.0001 Score=66.38 Aligned_cols=95 Identities=12% Similarity=0.013 Sum_probs=66.0
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc-c
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR-L 95 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~-~ 95 (405)
+|||.||..+.++..+ .+.+.|++.|++++++....+.+. | .+. .+||.||||||...... .
T Consensus 3 ~~~vliiqh~~~e~~~--~i~~~l~~~G~~v~v~~~~~~~~~---------p----~~~--~~~d~lIl~GGp~~~~d~~ 65 (250)
T 3m3p_A 3 LKPVMIIQFSASEGPG--HFGDFLAGEHIPFQVLRMDRSDPL---------P----AEI--RDCSGLAMMGGPMSANDDL 65 (250)
T ss_dssp CCCEEEEESSSSCCCH--HHHHHHHHTTCCEEEEEGGGTCCC---------C----SCG--GGSSEEEECCCSSCTTSCC
T ss_pred CCeEEEEECCCCCCHH--HHHHHHHHCCCeEEEEeccCCCcC---------c----Ccc--ccCCEEEECCCCCcccccc
Confidence 5689888877665544 445678999999999987654111 1 122 36999999999422211 1
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
.......++|+++.+.++||.+||.|.. +|+.+
T Consensus 66 ~~~~~~~~~i~~~~~~~~PvlGIC~G~Q-ll~~~ 98 (250)
T 3m3p_A 66 PWMPTLLALIRDAVAQRVPVIGHCLGGQ-LLAKA 98 (250)
T ss_dssp TTHHHHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred hHHHHHHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 1224578899999999999999999766 57764
No 85
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=97.69 E-value=4.7e-05 Score=67.66 Aligned_cols=87 Identities=15% Similarity=0.175 Sum_probs=61.9
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhC---CCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRA---KVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~---~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
.++|+|+.+++.. . ...+.|.++ |+++.+++.. +++ .++|+||+|||.....
T Consensus 3 ~~~I~Il~~~~~~-~---~~~~~l~~~~~~G~~~~~~~~~-------------------~~l--~~~dglil~GG~~~~~ 57 (227)
T 2abw_A 3 EITIGVLSLQGDF-E---PHINHFIKLQIPSLNIIQVRNV-------------------HDL--GLCDGLVIPGGESTTV 57 (227)
T ss_dssp CEEEEEECTTSCC-H---HHHHHHHTTCCTTEEEEEECSH-------------------HHH--HTCSEEEECCSCHHHH
T ss_pred CcEEEEEeCCCCc-H---HHHHHHHHhccCCeEEEEEcCc-------------------ccc--ccCCEEEECCCcHHHH
Confidence 3689999877532 2 357778877 7666554311 223 4589999999963222
Q ss_pred -hhhcC--hHHHHHHHHHhhc-CCEEEEEchHHHHHHHc
Q 015523 297 -RLQKS--RILKKLLKEQKVA-GRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 297 -~~~~~--~~l~~~l~~~~~~-~k~i~aic~g~~~La~a 331 (405)
.+..+ ..+.++|+++.+. ++||.+||.|..+|+.+
T Consensus 58 ~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~ 96 (227)
T 2abw_A 58 RRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKN 96 (227)
T ss_dssp HHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHH
Confidence 22232 5689999999999 99999999999999875
No 86
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.56 E-value=0.0001 Score=66.07 Aligned_cols=94 Identities=21% Similarity=0.216 Sum_probs=63.1
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh---
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER--- 297 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~--- 297 (405)
.||.||- .........+...|+..|+++.++-.+.+ +...+++ .++|.||+|||......
T Consensus 13 ~~~~~i~--~~~~~~~~~i~~~l~~~G~~v~v~~~~~~-------------~~~~~~l--~~~Dglil~GG~~~~~~~~~ 75 (239)
T 1o1y_A 13 VRVLAIR--HVEIEDLGMMEDIFREKNWSFDYLDTPKG-------------EKLERPL--EEYSLVVLLGGYMGAYEEEK 75 (239)
T ss_dssp CEEEEEC--SSTTSSCTHHHHHHHHTTCEEEEECGGGT-------------CCCSSCG--GGCSEEEECCCSCCTTCTTT
T ss_pred eEEEEEE--CCCCCCchHHHHHHHhCCCcEEEeCCcCc-------------cccccch--hcCCEEEECCCCccccCCcc
Confidence 4555554 44444444678888899998886643321 1011223 57899999998643322
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
......+.++|+++.++++||.+||-|..+|+.+
T Consensus 76 ~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~a 109 (239)
T 1o1y_A 76 YPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKV 109 (239)
T ss_dssp CTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHH
Confidence 1112368899999989999999999999999875
No 87
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=97.54 E-value=7.7e-05 Score=66.28 Aligned_cols=87 Identities=14% Similarity=0.091 Sum_probs=59.2
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhc---CCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhh-
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRA---GAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGS- 92 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~---~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~- 92 (405)
.++|+|+.+++- +....+.|++. |+++..+.+. ++++ ++|.||+|||....
T Consensus 3 ~~~I~Il~~~~~----~~~~~~~l~~~~~~G~~~~~~~~~-------------------~~l~--~~dglil~GG~~~~~ 57 (227)
T 2abw_A 3 EITIGVLSLQGD----FEPHINHFIKLQIPSLNIIQVRNV-------------------HDLG--LCDGLVIPGGESTTV 57 (227)
T ss_dssp CEEEEEECTTSC----CHHHHHHHHTTCCTTEEEEEECSH-------------------HHHH--TCSEEEECCSCHHHH
T ss_pred CcEEEEEeCCCC----cHHHHHHHHHhccCCeEEEEEcCc-------------------cccc--cCCEEEECCCcHHHH
Confidence 368999987742 22357888887 7666555311 1222 58999999995322
Q ss_pred hccccC--hHHHHHHHHHHHc-CCEEEEEccchHHhhhhc
Q 015523 93 VRLRDC--EILKKITSKQAEE-KRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 93 ~~~~~~--~~~~~~l~~~~~~-~~~i~aic~g~~~~La~a 129 (405)
..+..+ ..+.++|+++.+. ++||.+||.|-. +|+.+
T Consensus 58 ~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~Q-lL~~~ 96 (227)
T 2abw_A 58 RRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCI-LLSKN 96 (227)
T ss_dssp HHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHH-HTEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHH-HHHHH
Confidence 122222 4678999999999 999999999655 67764
No 88
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=97.48 E-value=0.00018 Score=61.65 Aligned_cols=83 Identities=19% Similarity=0.213 Sum_probs=56.1
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh-hh
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER-LQ 299 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~-~~ 299 (405)
|||+|+-.+|. +....+.|++.|+++.++... +++ .++|.|++|||...... +.
T Consensus 1 m~i~vl~~~g~----~~~~~~~l~~~G~~~~~~~~~-------------------~~~--~~~dglil~GG~~~~~~~~~ 55 (186)
T 2ywj_A 1 MIIGVLAIQGD----VEEHEEAIKKAGYEAKKVKRV-------------------EDL--EGIDALIIPGGESTAIGKLM 55 (186)
T ss_dssp CEEEEECSSSC----CHHHHHHHHHTTSEEEEECSG-------------------GGG--TTCSEEEECCSCHHHHHHHH
T ss_pred CEEEEEecCcc----hHHHHHHHHHCCCEEEEECCh-------------------HHh--ccCCEEEECCCCchhhhhhh
Confidence 57889865442 223468889999888776420 123 56899999999632221 11
Q ss_pred cChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 300 KSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 300 ~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
....+.++++ +.++||.+||.|..+|+.+
T Consensus 56 ~~~~~~~~i~---~~~~PilGIC~G~Qll~~~ 84 (186)
T 2ywj_A 56 KKYGLLEKIK---NSNLPILGTCAGMVLLSKG 84 (186)
T ss_dssp HHTTHHHHHH---TCCCCEEEETHHHHHHSSC
T ss_pred hccCHHHHHH---hcCCcEEEECHHHHHHHHH
Confidence 1223455555 7899999999999999986
No 89
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=97.46 E-value=0.00021 Score=62.06 Aligned_cols=87 Identities=18% Similarity=0.277 Sum_probs=58.2
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCC-----CeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccch
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAK-----VDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGA 295 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~-----~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~ 295 (405)
|||+|+-+..-+..++ ...|++.| ++++++.. . + + .++|.|++|||....
T Consensus 1 m~I~iid~~~g~~~s~---~~~l~~~G~~~~~~~~~~~~~-~--------------~------~-~~~dglilpG~g~~~ 55 (201)
T 1gpw_B 1 MRIGIISVGPGNIMNL---YRGVKRASENFEDVSIELVES-P--------------R------N-DLYDLLFIPGVGHFG 55 (201)
T ss_dssp CEEEEECCSSSCCHHH---HHHHHHHSTTBSSCEEEEECS-C--------------C------S-SCCSEEEECCCSCSH
T ss_pred CEEEEEecCCchHHHH---HHHHHHcCCCCCceEEEEECC-C--------------c------c-cCCCEEEECCCCcHH
Confidence 5788887663233333 35677777 77776642 1 1 1 468999999953211
Q ss_pred Hhhh--cChHHHHHHHHHhhcCCEEEEEchHHHHHHHcC
Q 015523 296 ERLQ--KSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHG 332 (405)
Q Consensus 296 ~~~~--~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aG 332 (405)
.... .+..+.++|+++.++++||.+||.|..+|+.+.
T Consensus 56 ~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~ 94 (201)
T 1gpw_B 56 EGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEES 94 (201)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEE
T ss_pred HHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhh
Confidence 1111 112377899999899999999999999999863
No 90
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=97.35 E-value=0.00039 Score=61.02 Aligned_cols=90 Identities=19% Similarity=0.207 Sum_probs=59.1
Q ss_pred CCcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCC-ccchH
Q 015523 218 DRMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGG-VAGAE 296 (405)
Q Consensus 218 ~~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG-~~~~~ 296 (405)
..|+||.++-+.+-. .....+.|+++|+.+.++..+. ..+++ .++|.||+||| .....
T Consensus 11 ~~~~~i~~id~~~~~---~~~~~~~l~~~G~~~~vv~~~~----------------~~~~l--~~~DglIl~GG~p~~~~ 69 (212)
T 2a9v_A 11 HHMLKIYVVDNGGQW---THREWRVLRELGVDTKIVPNDI----------------DSSEL--DGLDGLVLSGGAPNIDE 69 (212)
T ss_dssp CCCCBEEEEEESCCT---TCHHHHHHHHTTCBCCEEETTS----------------CGGGG--TTCSEEEEEEECSCGGG
T ss_pred cccceEEEEeCCCcc---HHHHHHHHHHCCCEEEEEeCCC----------------CHHHH--hCCCEEEECCCCCCCCc
Confidence 357888887654333 2346777888888877665432 23444 45999999999 44333
Q ss_pred hhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 297 RLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
.....+.+.+++ .+.++||.+||-|..+|+.+
T Consensus 70 ~~~~~~~l~~~~---~~~~~PiLGIC~G~Qll~~~ 101 (212)
T 2a9v_A 70 ELDKLGSVGKYI---DDHNYPILGICVGAQFIALH 101 (212)
T ss_dssp TGGGHHHHHHHH---HHCCSCEEEETHHHHHHHHH
T ss_pred ccccchhHHHHH---HhCCCCEEEEChHHHHHHHH
Confidence 221223344443 57899999999999999875
No 91
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=97.31 E-value=0.00037 Score=59.91 Aligned_cols=86 Identities=14% Similarity=0.105 Sum_probs=59.4
Q ss_pred EEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccccCh
Q 015523 20 VLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLRDCE 99 (405)
Q Consensus 20 i~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~~~ 99 (405)
|+|+=+.+.. ...+.+.|++.|+++.++..... ++++...++|.|++|||. .+. +..
T Consensus 3 i~iid~~~~~---~~~~~~~l~~~G~~~~~~~~~~~----------------~~~~~~~~~dglil~Gg~-~~~---~~~ 59 (189)
T 1wl8_A 3 IVIMDNGGQY---VHRIWRTLRYLGVETKIIPNTTP----------------LEEIKAMNPKGIIFSGGP-SLE---NTG 59 (189)
T ss_dssp EEEEECSCTT---HHHHHHHHHHTTCEEEEEETTCC----------------HHHHHHTCCSEEEECCCS-CTT---CCT
T ss_pred EEEEECCCch---HHHHHHHHHHCCCeEEEEECCCC----------------hHHhcccCCCEEEECCCC-Chh---hhh
Confidence 6666554433 44678899999999988875421 112211259999999993 332 245
Q ss_pred HHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 100 ILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 100 ~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
...++++++.++++||.+||.|.. +|+.+
T Consensus 60 ~~~~~i~~~~~~~~PilGIC~G~Q-~l~~~ 88 (189)
T 1wl8_A 60 NCEKVLEHYDEFNVPILGICLGHQ-LIAKF 88 (189)
T ss_dssp THHHHHHTGGGTCSCEEEETHHHH-HHHHH
T ss_pred hHHHHHHHHhhCCCeEEEEcHHHH-HHHHH
Confidence 568889877789999999999766 57764
No 92
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=97.17 E-value=0.0009 Score=58.03 Aligned_cols=87 Identities=17% Similarity=0.231 Sum_probs=56.2
Q ss_pred cEEEEEecCCCchhhHHHHHHHHHhcC-----CEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhh
Q 015523 18 LNVLVPVGFGTEEMEAVIIVDVLRRAG-----AQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGS 92 (405)
Q Consensus 18 ~ki~ill~~g~~~~e~~~~~~~l~~~~-----~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~ 92 (405)
|||+||-+..-+..+ +.+.|++.| +++.++.. . ++ .++|.||+||+....
T Consensus 1 m~I~iid~~~g~~~s---~~~~l~~~G~~~~~~~~~~~~~--~-----------------~~---~~~dglilpG~g~~~ 55 (201)
T 1gpw_B 1 MRIGIISVGPGNIMN---LYRGVKRASENFEDVSIELVES--P-----------------RN---DLYDLLFIPGVGHFG 55 (201)
T ss_dssp CEEEEECCSSSCCHH---HHHHHHHHSTTBSSCEEEEECS--C-----------------CS---SCCSEEEECCCSCSH
T ss_pred CEEEEEecCCchHHH---HHHHHHHcCCCCCceEEEEECC--C-----------------cc---cCCCEEEECCCCcHH
Confidence 578998665323333 346777777 77777642 1 02 368999999952111
Q ss_pred hccc--cChHHHHHHHHHHHcCCEEEEEccchHHhhhhcC
Q 015523 93 VRLR--DCEILKKITSKQAEEKRLYGAICAAPAVTLLPWG 130 (405)
Q Consensus 93 ~~~~--~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ag 130 (405)
.... .+..+.++|+++.++++||.+||.|-. +|+.+.
T Consensus 56 ~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~~~ 94 (201)
T 1gpw_B 56 EGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQ-LLFEES 94 (201)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHH-TTSSEE
T ss_pred HHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHH-HHHHhh
Confidence 1110 112367899999999999999999755 677654
No 93
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.14 E-value=0.00061 Score=60.92 Aligned_cols=94 Identities=14% Similarity=0.109 Sum_probs=60.9
Q ss_pred EEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc---c
Q 015523 20 VLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL---R 96 (405)
Q Consensus 20 i~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~---~ 96 (405)
|-|++...+.......+.++|++.|+++.++-.+.+ +...+++ ..+|.||+|||....... .
T Consensus 13 ~~~~~i~~~~~~~~~~i~~~l~~~G~~v~v~~~~~~-------------~~~~~~l--~~~Dglil~GG~~~~~~~~~~~ 77 (239)
T 1o1y_A 13 VRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKG-------------EKLERPL--EEYSLVVLLGGYMGAYEEEKYP 77 (239)
T ss_dssp CEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGT-------------CCCSSCG--GGCSEEEECCCSCCTTCTTTCT
T ss_pred eEEEEEECCCCCCchHHHHHHHhCCCcEEEeCCcCc-------------cccccch--hcCCEEEECCCCccccCCccCh
Confidence 444444555555566788999999998886643321 0000122 369999999984222211 1
Q ss_pred cChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 97 DCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
....+.++|+++.++++||.+||-|-. +|+.+
T Consensus 78 ~l~~~~~~i~~~~~~~~PiLGIC~G~Q-lL~~a 109 (239)
T 1o1y_A 78 FLKYEFQLIEEILKKEIPFLGICLGSQ-MLAKV 109 (239)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred hHHHHHHHHHHHHHCCCCEEEEchhHH-HHHHH
Confidence 113578899999999999999999765 67765
No 94
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=97.14 E-value=0.00046 Score=59.68 Aligned_cols=90 Identities=10% Similarity=0.070 Sum_probs=56.4
Q ss_pred EEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccccCh
Q 015523 20 VLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLRDCE 99 (405)
Q Consensus 20 i~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~~~ 99 (405)
|+|+=..+.. ...+.+.|++.|+++.++..+.. .++++...+||.+|++||........+.+
T Consensus 4 i~iid~~~s~---~~~~~~~l~~~G~~~~v~~~~~~---------------~~~~~~~~~~dglil~gG~~~~~~~~~~~ 65 (195)
T 1qdl_B 4 TLIIDNYDSF---VYNIAQIVGELGSYPIVIRNDEI---------------SIKGIERIDPDRLIISPGPGTPEKREDIG 65 (195)
T ss_dssp EEEEECSCSS---HHHHHHHHHHTTCEEEEEETTTS---------------CHHHHHHHCCSEEEECCCSSCTTSHHHHT
T ss_pred EEEEECCCch---HHHHHHHHHhCCCEEEEEeCCCC---------------CHHHHhhCCCCEEEECCCCCChhhhhhhh
Confidence 6666533322 24678899999999988875431 11122211489999988732222111122
Q ss_pred HHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 100 ILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 100 ~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
...++++++ +.++||.+||.|.. +|+.+
T Consensus 66 ~~~~~i~~~-~~~~PvLGIC~G~Q-lL~~~ 93 (195)
T 1qdl_B 66 VSLDVIKYL-GKRTPILGVCLGHQ-AIGYA 93 (195)
T ss_dssp THHHHHHHH-TTTSCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHh-cCCCcEEEEehHHH-HHHHH
Confidence 346788874 78999999999766 67764
No 95
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=97.09 E-value=0.0014 Score=62.39 Aligned_cols=87 Identities=14% Similarity=0.096 Sum_probs=65.1
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhc
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQK 300 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~ 300 (405)
++|+++=+ |+. ....+.|.+.|+.+.++-.+. ..+++...++|.||++||..+.. .
T Consensus 191 ~~V~viD~-G~k----~ni~r~L~~~G~~v~vvp~~~----------------~~e~i~~~~~DGliLsGGPgdp~---~ 246 (379)
T 1a9x_B 191 FHVVAYDF-GAK----RNILRMLVDRGCRLTIVPAQT----------------SAEDVLKMNPDGIFLSNGPGDPA---P 246 (379)
T ss_dssp EEEEEEES-SCC----HHHHHHHHHTTEEEEEEETTC----------------CHHHHHTTCCSEEEECCCSBCST---T
T ss_pred CEEEEEEC-CCh----HHHHHHHHHCCCEEEEEeccC----------------CHHHHhhcCCCEEEEeCCCCChH---H
Confidence 57888877 665 347888889999888774332 12222224689999999964433 3
Q ss_pred ChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 301 SRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 301 ~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
....+++|+++..+++||.+||-|..+|+.+
T Consensus 247 ~~~~~~~Ir~~~~~~~PILGIClG~QLLa~A 277 (379)
T 1a9x_B 247 CDYAITAIQKFLETDIPVFGICLGHQLLALA 277 (379)
T ss_dssp CHHHHHHHHHHTTSCCCEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECchHHHHHHH
Confidence 4678899999999999999999999999875
No 96
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=97.08 E-value=0.00086 Score=57.38 Aligned_cols=83 Identities=16% Similarity=0.144 Sum_probs=53.7
Q ss_pred cEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh-ccc
Q 015523 18 LNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV-RLR 96 (405)
Q Consensus 18 ~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~-~~~ 96 (405)
|||+|+-.+| .+....+.|++.|+++.++... +++ .++|.|++|||..... .+.
T Consensus 1 m~i~vl~~~g----~~~~~~~~l~~~G~~~~~~~~~-------------------~~~--~~~dglil~GG~~~~~~~~~ 55 (186)
T 2ywj_A 1 MIIGVLAIQG----DVEEHEEAIKKAGYEAKKVKRV-------------------EDL--EGIDALIIPGGESTAIGKLM 55 (186)
T ss_dssp CEEEEECSSS----CCHHHHHHHHHTTSEEEEECSG-------------------GGG--TTCSEEEECCSCHHHHHHHH
T ss_pred CEEEEEecCc----chHHHHHHHHHCCCEEEEECCh-------------------HHh--ccCCEEEECCCCchhhhhhh
Confidence 5899996543 2333468899999888776421 122 2589999999942221 111
Q ss_pred cChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 97 DCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
....+.++++ +.++||.+||.|-. +|+.+
T Consensus 56 ~~~~~~~~i~---~~~~PilGIC~G~Q-ll~~~ 84 (186)
T 2ywj_A 56 KKYGLLEKIK---NSNLPILGTCAGMV-LLSKG 84 (186)
T ss_dssp HHTTHHHHHH---TCCCCEEEETHHHH-HHSSC
T ss_pred hccCHHHHHH---hcCCcEEEECHHHH-HHHHH
Confidence 1223555555 78899999999755 68776
No 97
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=97.06 E-value=0.00025 Score=62.06 Aligned_cols=87 Identities=17% Similarity=0.119 Sum_probs=56.9
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQ 299 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~ 299 (405)
.++|+|+=|-.-+. ..+...|++.|++++++.. .+++ .++|.||+||+- ......
T Consensus 2 ~~~I~iiD~g~~n~---~si~~al~~~G~~~~v~~~-------------------~~~l--~~~D~lilPG~g-~~~~~~ 56 (211)
T 4gud_A 2 TQNVVIIDTGCANI---SSVKFAIERLGYAVTISRD-------------------PQVV--LAADKLFLPGVG-TASEAM 56 (211)
T ss_dssp -CCEEEECCCCTTH---HHHHHHHHHTTCCEEEECC-------------------HHHH--HHCSEEEECCCS-CHHHHH
T ss_pred CCEEEEEECCCChH---HHHHHHHHHCCCEEEEECC-------------------HHHH--hCCCEEEECCCC-CHHHHH
Confidence 46788885432233 4466778889998886421 1233 457999999963 233222
Q ss_pred cChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 300 KSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 300 ~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
.......+++...+.++||.+||.|..+|+.+
T Consensus 57 ~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~ 88 (211)
T 4gud_A 57 KNLTERDLIELVKRVEKPLLGICLGMQLLGKL 88 (211)
T ss_dssp HHHHHTTCHHHHHHCCSCEEEETHHHHTTSSE
T ss_pred HHHHhcChHHHHHHcCCCEEEEchhHhHHHHH
Confidence 22233345677778999999999999999764
No 98
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=96.96 E-value=0.00029 Score=61.72 Aligned_cols=86 Identities=16% Similarity=0.074 Sum_probs=54.2
Q ss_pred cEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcccc
Q 015523 18 LNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLRD 97 (405)
Q Consensus 18 ~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~ 97 (405)
+||+|+=|- ..-+..+...|++.|+++.++.. . +++. ++|.||+||+. .+.....
T Consensus 3 ~~I~iiD~g---~~n~~si~~al~~~G~~~~v~~~-~------------------~~l~--~~D~lilPG~g-~~~~~~~ 57 (211)
T 4gud_A 3 QNVVIIDTG---CANISSVKFAIERLGYAVTISRD-P------------------QVVL--AADKLFLPGVG-TASEAMK 57 (211)
T ss_dssp CCEEEECCC---CTTHHHHHHHHHHTTCCEEEECC-H------------------HHHH--HCSEEEECCCS-CHHHHHH
T ss_pred CEEEEEECC---CChHHHHHHHHHHCCCEEEEECC-H------------------HHHh--CCCEEEECCCC-CHHHHHH
Confidence 478887332 33345677888999998887531 1 1222 57999999952 2222211
Q ss_pred ChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 98 CEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 98 ~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
......+++...+.++||.+||.|-. +|+.+
T Consensus 58 ~~~~~~~i~~~~~~~~PvlGIClG~Q-lL~~~ 88 (211)
T 4gud_A 58 NLTERDLIELVKRVEKPLLGICLGMQ-LLGKL 88 (211)
T ss_dssp HHHHTTCHHHHHHCCSCEEEETHHHH-TTSSE
T ss_pred HHHhcChHHHHHHcCCCEEEEchhHh-HHHHH
Confidence 12223456777788999999999655 67764
No 99
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=96.88 E-value=0.00049 Score=60.00 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=66.4
Q ss_pred cCEEEEEeCCCC---cHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccch-
Q 015523 220 MPRVLIPIANGS---EEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGA- 295 (405)
Q Consensus 220 ~~~V~il~~~g~---~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~- 295 (405)
.+||+++-+-.- .+.-+......|++.|++++.+..... .++...+.+ .+.|+|++|||....
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~-----------~~~~~~~~l--~~ad~I~l~GG~~~~l 93 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATE-----------SLGEITTKL--RKNDFIYVTGGNTFFL 93 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTS-----------CHHHHHHHH--HHSSEEEECCSCHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCC-----------ChHHHHHHH--HhCCEEEECCCCHHHH
Confidence 479998865321 112345678899999998877643321 111111223 567999999985211
Q ss_pred HhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHH
Q 015523 296 ERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHK 330 (405)
Q Consensus 296 ~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~ 330 (405)
....+...+.+.|++..++|++++++|.|+.+++.
T Consensus 94 ~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~~ 128 (206)
T 3l4e_A 94 LQELKRTGADKLILEEIAAGKLYIGESAGAVITSP 128 (206)
T ss_dssp HHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTSS
T ss_pred HHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhcc
Confidence 12345667889999999999999999999999975
No 100
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=96.85 E-value=0.00065 Score=60.28 Aligned_cols=97 Identities=12% Similarity=0.071 Sum_probs=65.3
Q ss_pred CcCEEEEEeCCC---CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccch
Q 015523 219 RMPRVLIPIANG---SEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGA 295 (405)
Q Consensus 219 ~~~~V~il~~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~ 295 (405)
..+||+|+-+-. -.+.-+......|++.|+++..+... +...+++ .+.|+|++|||....
T Consensus 30 ~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~---------------~d~~~~l--~~ad~I~lpGG~~~~ 92 (229)
T 1fy2_A 30 GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRV---------------ADPLAAI--EKAEIIIVGGGNTFQ 92 (229)
T ss_dssp TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSS---------------SCHHHHH--HHCSEEEECCSCHHH
T ss_pred CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEecc---------------ccHHHHH--hcCCEEEECCCcHHH
Confidence 347899887642 22333456778888888876554211 1111334 568999999985211
Q ss_pred -HhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcC
Q 015523 296 -ERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHG 332 (405)
Q Consensus 296 -~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aG 332 (405)
....+...+.+.|++..++|++++++|.|+.+|+...
T Consensus 93 ~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~~~~ 130 (229)
T 1fy2_A 93 LLKESRERGLLAPMADRVKRGALYIGWSAGANLACPTI 130 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTSSBS
T ss_pred HHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhcccc
Confidence 1233455688899999999999999999999997643
No 101
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=96.69 E-value=0.00044 Score=60.89 Aligned_cols=88 Identities=17% Similarity=0.105 Sum_probs=54.4
Q ss_pred cCEEEEEeCC-CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhh
Q 015523 220 MPRVLIPIAN-GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERL 298 (405)
Q Consensus 220 ~~~V~il~~~-g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~ 298 (405)
.++|+|+=+. ++. ..+...|++.|+.+.++..+.. .++++..++|.|++|||.......
T Consensus 24 ~~~I~iiD~g~~~~----~~i~~~l~~~G~~~~vv~~~~~----------------~~~l~~~~~dglil~Gg~~~~~~~ 83 (218)
T 2vpi_A 24 EGAVVILDAGAQYG----KVIDRRVRELFVQSEIFPLETP----------------AFAIKEQGFRAIIISGGPNSVYAE 83 (218)
T ss_dssp TTCEEEEECSTTTT----HHHHHHHHHTTCCEEEECTTCC----------------HHHHHHHTCSEEEEEC--------
T ss_pred CCeEEEEECCCchH----HHHHHHHHHCCCEEEEEECCCC----------------hHHHhhcCCCEEEECCCCcccccc
Confidence 3689999554 553 3567888889988887754431 122212468999999996322211
Q ss_pred hcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 299 QKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 299 ~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
.. ..+.+...+.++||.+||.|..+|+.+
T Consensus 84 -~~---~~~~~~~~~~~~PilGIC~G~Qll~~~ 112 (218)
T 2vpi_A 84 -DA---PWFDPAIFTIGKPVLGICYGMQMMNKV 112 (218)
T ss_dssp --C---CCCCGGGGTSSCCEEEETHHHHHHHHH
T ss_pred -cc---hhHHHHHHHcCCCEEEEcHHHHHHHHH
Confidence 11 112234457899999999999999885
No 102
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=96.61 E-value=0.0035 Score=57.14 Aligned_cols=96 Identities=11% Similarity=0.072 Sum_probs=59.5
Q ss_pred CEEEEEeCCC--CcHHHHHHHHHHHHh----CCCeEEEEeecCCceeecCCCcEEeeCCCc-cCcCCCCccEEEEcCCcc
Q 015523 221 PRVLIPIANG--SEEIEIVTIVDILRR----AKVDVVVASVERSTQIVASQGVKIIADKSI-SDAAESVYDLIILPGGVA 293 (405)
Q Consensus 221 ~~V~il~~~g--~~~~e~~~~~~~l~~----~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l-~~~~~~~~D~livpgG~~ 293 (405)
.+|+|+.-.| +.+ .+..+...|.. .+.++.++..+.. .+....+.. + +.+ .++|.|++|||..
T Consensus 9 ~~Iaivg~y~~~~~d-ny~S~~~aL~~~g~~~~~~v~v~~~~~~-~~~~~~~~~------~~~~~--~~~dgiil~GG~~ 78 (273)
T 2w7t_A 9 VRIAFVGKYLQDAGD-TYFSVLQCFEHCQIALQVRLDILYVDSE-ELEGPNADE------ARKAL--LGCDGIFVPGGFG 78 (273)
T ss_dssp EEEEEEECCHHHHTT-TTHHHHHHHHHHHHHHTCCEEEEEEEGG-GGSSTTTHH------HHHHH--HTCSEEEECCCCT
T ss_pred CEEEEEeCCCcCCch-HHHHHHHHHHHHHHhcCCceEEeccChh-hcccccchh------HHHHH--hhCCEEEecCCCC
Confidence 6889884221 111 34444444443 3567777766653 222111100 2 222 4689999999964
Q ss_pred chHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHH
Q 015523 294 GAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHK 330 (405)
Q Consensus 294 ~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~ 330 (405)
. . .....+++++++.+.++||.+||-|..+|+.
T Consensus 79 ~-~---~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~ 111 (273)
T 2w7t_A 79 N-R---GVDGKCAAAQVARMNNIPYFGVXLGMQVAVI 111 (273)
T ss_dssp T-T---THHHHHHHHHHHHHHTCCEEEETHHHHHHHH
T ss_pred C-c---CchhHHHHHHHHHHCCCcEEEECcCHHHHHH
Confidence 3 2 2235778899888899999999999999975
No 103
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=96.58 E-value=0.011 Score=54.52 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=66.7
Q ss_pred CcCEEEEEeCCCC-cHHHHHHHHHHHHhCCC--eEEEEeecCCceeecCCCcEEee-CCCccCcCCCCccEEEEcCCccc
Q 015523 219 RMPRVLIPIANGS-EEIEIVTIVDILRRAKV--DVVVASVERSTQIVASQGVKIIA-DKSISDAAESVYDLIILPGGVAG 294 (405)
Q Consensus 219 ~~~~V~il~~~g~-~~~e~~~~~~~l~~~~~--~v~~vs~~~~~~v~~~~g~~v~~-~~~l~~~~~~~~D~livpgG~~~ 294 (405)
+++||+||-...- ...| ..+...|..... +++++.+... ......--.+.. =.++++++...||++||.||..+
T Consensus 46 rplkI~ILnlmp~k~~te-~qf~rlL~~~~~qv~v~~~~~~~~-~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGsP~~ 123 (312)
T 2h2w_A 46 RPLEILILNLMPDKIKTE-IQLLRLLGNTPLQVNVTLLYTETH-KPKHTPIEHILKFYTTFSAVKDRKFDGFIITGAPVE 123 (312)
T ss_dssp CCEEEEEECCCSSHHHHH-HHHHHHHHSSSSCEEEEEECCSCC-CCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCCSCT
T ss_pred CCceEEEEeCCCCcCchH-HHHHHHhcCCCCcEEEEEEEccCC-CCCCccHHHHhhccCCcccccccCcCEEEECCCCCC
Confidence 5689999976433 3333 446666666664 4444544432 100000000000 01456655578999999999632
Q ss_pred hH---hhhcChHHHHHHHHHhhcCCEEEEEchHHHH-HHHcC
Q 015523 295 AE---RLQKSRILKKLLKEQKVAGRIYGAVCSSPIV-LHKHG 332 (405)
Q Consensus 295 ~~---~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~-La~aG 332 (405)
.. ...--.++.+++++...+++++.+||-|..+ +..+|
T Consensus 124 ~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~ 165 (312)
T 2h2w_A 124 LLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFY 165 (312)
T ss_dssp TSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHH
T ss_pred CCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhC
Confidence 21 1122257888888888999999999999998 54443
No 104
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=96.57 E-value=0.0021 Score=55.98 Aligned_cols=100 Identities=16% Similarity=0.054 Sum_probs=64.3
Q ss_pred CCCcEEEEEecCCC---chhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchh
Q 015523 15 SFALNVLVPVGFGT---EEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPG 91 (405)
Q Consensus 15 ~~~~ki~ill~~g~---~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~ 91 (405)
...+||+|+-+-.- ...-+....+.|++.|++++.+..... .++...+.+ .+.|+|++|||...
T Consensus 25 ~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~-----------~~~~~~~~l--~~ad~I~l~GG~~~ 91 (206)
T 3l4e_A 25 LQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATE-----------SLGEITTKL--RKNDFIYVTGGNTF 91 (206)
T ss_dssp CTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTS-----------CHHHHHHHH--HHSSEEEECCSCHH
T ss_pred cCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCC-----------ChHHHHHHH--HhCCEEEECCCCHH
Confidence 34679999975422 123346678899999998877643221 010001122 25799999999311
Q ss_pred -hhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhh
Q 015523 92 -SVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLP 128 (405)
Q Consensus 92 -~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ 128 (405)
.........+.+.|++++++|++++++|.| +.+++.
T Consensus 92 ~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAG-a~~l~~ 128 (206)
T 3l4e_A 92 FLLQELKRTGADKLILEEIAAGKLYIGESAG-AVITSP 128 (206)
T ss_dssp HHHHHHHHHTHHHHHHHHHHTTCEEEEETHH-HHTTSS
T ss_pred HHHHHHHHCChHHHHHHHHHcCCeEEEECHH-HHHhcc
Confidence 122234567888999999999999999995 545664
No 105
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=96.54 E-value=0.0056 Score=55.12 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=53.4
Q ss_pred HHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCcc-chHh-------------hhcChHH
Q 015523 239 IVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVA-GAER-------------LQKSRIL 304 (405)
Q Consensus 239 ~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~-~~~~-------------~~~~~~l 304 (405)
.++.+.++|..+.++..... . .+.+. ...+|.|++|||.. .+.. ...+...
T Consensus 33 ~~~~l~~aG~~pv~lp~~~~-------------~-~~~~~-l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~ 97 (254)
T 3fij_A 33 YVDAIQKVGGFPIALPIDDP-------------S-TAVQA-ISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYE 97 (254)
T ss_dssp HHHHHHHHTCEEEEECCCCG-------------G-GHHHH-HHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCc-------------h-HHHHH-HhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHH
Confidence 56677778888777755431 0 11111 14689999999942 0111 1123458
Q ss_pred HHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 305 KKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 305 ~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
+++|+++.++++||.+||-|..+|+.+
T Consensus 98 ~~lir~a~~~~~PiLGIC~G~Qll~~a 124 (254)
T 3fij_A 98 IALVRAALDAGKPIFAICRGMQLVNVA 124 (254)
T ss_dssp HHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 899999999999999999999999876
No 106
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=96.54 E-value=0.0049 Score=58.63 Aligned_cols=88 Identities=18% Similarity=0.154 Sum_probs=62.0
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLR 96 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~ 96 (405)
.+||+++=+ |+. ..+.+.|++.|+++.++..+.. .+++...++|.||++||...+ .
T Consensus 190 ~~~V~viD~-G~k----~ni~r~L~~~G~~v~vvp~~~~----------------~e~i~~~~~DGliLsGGPgdp---~ 245 (379)
T 1a9x_B 190 PFHVVAYDF-GAK----RNILRMLVDRGCRLTIVPAQTS----------------AEDVLKMNPDGIFLSNGPGDP---A 245 (379)
T ss_dssp CEEEEEEES-SCC----HHHHHHHHHTTEEEEEEETTCC----------------HHHHHTTCCSEEEECCCSBCS---T
T ss_pred CCEEEEEEC-CCh----HHHHHHHHHCCCEEEEEeccCC----------------HHHHhhcCCCEEEEeCCCCCh---H
Confidence 357888877 554 4478888999999888854321 111111258999999994222 2
Q ss_pred cChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 97 DCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
+.....++++++.++++||.+||-|-. +|+.+
T Consensus 246 ~~~~~~~~Ir~~~~~~~PILGIClG~Q-LLa~A 277 (379)
T 1a9x_B 246 PCDYAITAIQKFLETDIPVFGICLGHQ-LLALA 277 (379)
T ss_dssp TCHHHHHHHHHHTTSCCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECchHH-HHHHH
Confidence 346788999999999999999999766 57753
No 107
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=96.50 E-value=0.0043 Score=57.10 Aligned_cols=112 Identities=16% Similarity=0.194 Sum_probs=64.3
Q ss_pred CcCEEEEEeCCCC-cHHHHHHHHHHHHhCC--CeEEEEeecCCceeecCCCcEEee-CCCccCcCCCCccEEEEcCCccc
Q 015523 219 RMPRVLIPIANGS-EEIEIVTIVDILRRAK--VDVVVASVERSTQIVASQGVKIIA-DKSISDAAESVYDLIILPGGVAG 294 (405)
Q Consensus 219 ~~~~V~il~~~g~-~~~e~~~~~~~l~~~~--~~v~~vs~~~~~~v~~~~g~~v~~-~~~l~~~~~~~~D~livpgG~~~ 294 (405)
+++||+||-...- ...| ..+...|.... ++++++.+... ......--.+.. =..+++++...||++||.||..+
T Consensus 34 rplkI~ILnlmp~k~~te-~qf~rlL~~~~~qv~v~~~~~~~~-~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGap~~ 111 (301)
T 2vdj_A 34 RALKIAILNLMPTKQETE-AQLLRLIGNTPLQLDVHLLHMESH-LSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPVE 111 (301)
T ss_dssp CCEEEEEECCCSSHHHHH-HHHHHHHTCSSSCEEEEEECCCC-------------CCEECHHHHTTSCEEEEEECCCTTT
T ss_pred CCceEEEEeCCCCcCchH-HHHHHHhcCCCCcEEEEEEeccCC-CCCCccHHHHhhcccCcccccccccCEEEECCCCCc
Confidence 5689999976433 3333 44566665555 44554544433 111111111111 01344444578999999998632
Q ss_pred hH---hhhcChHHHHHHHHHhhcCCEEEEEchHHHH-HHHcC
Q 015523 295 AE---RLQKSRILKKLLKEQKVAGRIYGAVCSSPIV-LHKHG 332 (405)
Q Consensus 295 ~~---~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~-La~aG 332 (405)
.. ...--.++.+++++...+++++.+||-|..+ +..+|
T Consensus 112 ~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~ 153 (301)
T 2vdj_A 112 TLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHY 153 (301)
T ss_dssp TSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHH
T ss_pred CCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhC
Confidence 21 1112257888888888999999999999998 44443
No 108
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.39 E-value=0.0034 Score=63.16 Aligned_cols=88 Identities=18% Similarity=0.177 Sum_probs=62.0
Q ss_pred cCEEEEEeCC-CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh-
Q 015523 220 MPRVLIPIAN-GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER- 297 (405)
Q Consensus 220 ~~~V~il~~~-g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~- 297 (405)
|++|+|+-+. ++. ....+.|++.|+.+.++.... + ..+ .++|.||+|||- ....
T Consensus 4 m~~I~Iid~~~g~~----~~~~~~l~~~G~~~~vv~~~~--------------~---~~l--~~~DglILpGgG-~~~~~ 59 (555)
T 1jvn_A 4 MPVVHVIDVESGNL----QSLTNAIEHLGYEVQLVKSPK--------------D---FNI--SGTSRLILPGVG-NYGHF 59 (555)
T ss_dssp SCEEEEECCSCSCC----HHHHHHHHHTTCEEEEESSGG--------------G---CCS--TTCSCEEEEECS-CHHHH
T ss_pred CCEEEEEECCCCCH----HHHHHHHHHCCCEEEEECCcc--------------c---ccc--ccCCEEEECCCC-chHhH
Confidence 5799999875 332 346788888999888764211 0 122 568999999952 2221
Q ss_pred --hhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 298 --LQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 298 --~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
...+..+.++|+++.++++||.+||.|..+|+.+
T Consensus 60 ~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a 95 (555)
T 1jvn_A 60 VDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAG 95 (555)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEE
T ss_pred hhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhh
Confidence 1122346788999989999999999999999985
No 109
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=96.29 E-value=0.0051 Score=53.76 Aligned_cols=90 Identities=18% Similarity=0.132 Sum_probs=56.0
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCC-chhhh
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGG-MPGSV 93 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg-~~~~~ 93 (405)
..++||.++=+.+-. ...+.+.|++.|+++.++..+. ..+++. ++|.||+||| .....
T Consensus 11 ~~~~~i~~id~~~~~---~~~~~~~l~~~G~~~~vv~~~~----------------~~~~l~--~~DglIl~GG~p~~~~ 69 (212)
T 2a9v_A 11 HHMLKIYVVDNGGQW---THREWRVLRELGVDTKIVPNDI----------------DSSELD--GLDGLVLSGGAPNIDE 69 (212)
T ss_dssp CCCCBEEEEEESCCT---TCHHHHHHHHTTCBCCEEETTS----------------CGGGGT--TCSEEEEEEECSCGGG
T ss_pred cccceEEEEeCCCcc---HHHHHHHHHHCCCEEEEEeCCC----------------CHHHHh--CCCEEEECCCCCCCCc
Confidence 356788887644333 3346788888888877765432 122333 4999999999 43332
Q ss_pred ccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 94 RLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
.....+.+.+++ .++++||.+||-|-. +|+.+
T Consensus 70 ~~~~~~~l~~~~---~~~~~PiLGIC~G~Q-ll~~~ 101 (212)
T 2a9v_A 70 ELDKLGSVGKYI---DDHNYPILGICVGAQ-FIALH 101 (212)
T ss_dssp TGGGHHHHHHHH---HHCCSCEEEETHHHH-HHHHH
T ss_pred ccccchhHHHHH---HhCCCCEEEEChHHH-HHHHH
Confidence 211223344443 478999999999765 57764
No 110
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=96.26 E-value=0.015 Score=58.32 Aligned_cols=93 Identities=13% Similarity=0.070 Sum_probs=59.8
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQ 299 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~ 299 (405)
..+|+||=|-.-.. ..+...|++.|..++++..+. .++++...++|.||+|||........
T Consensus 7 ~~~IlilD~Gs~~~---~~I~r~lre~Gv~~eiv~~~~----------------~~~~i~~~~~dgIIlsGGp~s~~~~~ 67 (556)
T 3uow_A 7 YDKILVLNFGSQYF---HLIVKRLNNIKIFSETKDYGV----------------ELKDIKDMNIKGVILSGGPYSVTEAG 67 (556)
T ss_dssp CCEEEEEESSCTTH---HHHHHHHHHTTCCEEEEETTC----------------CGGGTTTSCEEEEEECCCSCCTTSTT
T ss_pred CCEEEEEECCCccH---HHHHHHHHHCCCeEEEEECCC----------------CHHHHhhcCCCEEEECCCCCcccccC
Confidence 36777775543222 356778888998888875432 23344334789999999975432211
Q ss_pred cChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 300 KSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 300 ~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
.......+++.+.++++||.+||.|..+|+.+
T Consensus 68 ~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~ 99 (556)
T 3uow_A 68 SPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQ 99 (556)
T ss_dssp CCCCCHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred CcchhHHHHHHhhhcCCCEEEECHHHHHHHHH
Confidence 11112234444567799999999999999976
No 111
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=96.25 E-value=0.0013 Score=57.85 Aligned_cols=88 Identities=17% Similarity=0.069 Sum_probs=51.9
Q ss_pred CcEEEEEecC-CCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 17 ALNVLVPVGF-GTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 17 ~~ki~ill~~-g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
.+||+||=+. ++. ..+...|++.|+++.++..+.. .+++...+||.||+|||. .....
T Consensus 24 ~~~I~iiD~g~~~~----~~i~~~l~~~G~~~~vv~~~~~----------------~~~l~~~~~dglil~Gg~-~~~~~ 82 (218)
T 2vpi_A 24 EGAVVILDAGAQYG----KVIDRRVRELFVQSEIFPLETP----------------AFAIKEQGFRAIIISGGP-NSVYA 82 (218)
T ss_dssp TTCEEEEECSTTTT----HHHHHHHHHTTCCEEEECTTCC----------------HHHHHHHTCSEEEEEC--------
T ss_pred CCeEEEEECCCchH----HHHHHHHHHCCCEEEEEECCCC----------------hHHHhhcCCCEEEECCCC-ccccc
Confidence 4689999554 443 3567888888988888865432 011111358999999994 22111
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
.+... +.++..+.++||.+||.|.. +|+.+
T Consensus 83 ~~~~~---~~~~~~~~~~PilGIC~G~Q-ll~~~ 112 (218)
T 2vpi_A 83 EDAPW---FDPAIFTIGKPVLGICYGMQ-MMNKV 112 (218)
T ss_dssp --CCC---CCGGGGTSSCCEEEETHHHH-HHHHH
T ss_pred ccchh---HHHHHHHcCCCEEEEcHHHH-HHHHH
Confidence 11111 22344568999999999766 57763
No 112
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=96.18 E-value=0.022 Score=52.58 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=64.0
Q ss_pred CCCCcEEEEEecCC-CchhhHHHHHHHHHhcC--CEEEEEecCCCceeEe---ccCcEEecCcccCCCCCCcccEEEEcC
Q 015523 14 PSFALNVLVPVGFG-TEEMEAVIIVDVLRRAG--AQVTMASVEPQLEVEA---SSGTRLVADTSISNCSHQVFDLIALPG 87 (405)
Q Consensus 14 ~~~~~ki~ill~~g-~~~~e~~~~~~~l~~~~--~~v~~vs~~~~~~v~~---~~g~~v~~~~~~~~~~~~~~d~liipg 87 (405)
..+++||+||-.-. ....| .-+...|.... ++++++.+... ..+. ++--.+. .++.+.....||++||-|
T Consensus 44 dirplkI~ILnlmp~k~~te-~qf~rlL~~~~~qv~v~~~~~~~~-~~~~~~~~hl~~~y--~~f~~~~~~~~DglIITG 119 (312)
T 2h2w_A 44 DIRPLEILILNLMPDKIKTE-IQLLRLLGNTPLQVNVTLLYTETH-KPKHTPIEHILKFY--TTFSAVKDRKFDGFIITG 119 (312)
T ss_dssp -CCCEEEEEECCCSSHHHHH-HHHHHHHHSSSSCEEEEEECCSCC-CCCSSCHHHHHHHC--BCGGGTTTCCEEEEEECC
T ss_pred CCCCceEEEEeCCCCcCchH-HHHHHHhcCCCCcEEEEEEEccCC-CCCCccHHHHhhcc--CCcccccccCcCEEEECC
Confidence 46789999997532 22233 44455555554 55555555433 1110 0000111 134444445799999999
Q ss_pred Cchhhhcc---ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcC
Q 015523 88 GMPGSVRL---RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWG 130 (405)
Q Consensus 88 g~~~~~~~---~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ag 130 (405)
+....... .--.++.++++...++++++.+||-|..+++..+|
T Consensus 120 sP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~ 165 (312)
T 2h2w_A 120 APVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFY 165 (312)
T ss_dssp CSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHH
T ss_pred CCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhC
Confidence 94211111 11256778888888899999999998664344433
No 113
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=96.11 E-value=0.005 Score=56.55 Aligned_cols=102 Identities=9% Similarity=0.053 Sum_probs=62.0
Q ss_pred cCEEEEE-eCCCCcHHHHHHHHHHHHhCCC----eEEEEeecCCceeecCCCcEEeeCCC-ccCc--CCCCccEEEEcCC
Q 015523 220 MPRVLIP-IANGSEEIEIVTIVDILRRAKV----DVVVASVERSTQIVASQGVKIIADKS-ISDA--AESVYDLIILPGG 291 (405)
Q Consensus 220 ~~~V~il-~~~g~~~~e~~~~~~~l~~~~~----~v~~vs~~~~~~v~~~~g~~v~~~~~-l~~~--~~~~~D~livpgG 291 (405)
.++|+|+ -|.+.... +..+.+.|+++|+ ++.++..+.. .+... .+..+.. ++++ ...++|.||+|||
T Consensus 25 ~~~Iavv~d~~~~~~s-~~si~~~L~~~G~~~~~~v~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~l~~~dgiil~GG 99 (289)
T 2v4u_A 25 ICSIALVGKYTKLRDC-YASVFKALEHSALAINHKLNLMYIDSI-DLEKI---TETEDPVKFHEAWQKLCKADGILVPGG 99 (289)
T ss_dssp EEEEEEEESCSSCCGG-GHHHHHHHHHHHHHTTEEEEEEEEEGG-GGSHH---HHHHCHHHHHHHHHHHHHCSEEEECSC
T ss_pred ceEEEEEecCcCCCcc-HHHHHHHHHHhhhhhCCceEEEEechh-hcccc---cccCChhhhhhHHHHHhhCCEEEecCC
Confidence 3688887 55344321 3356777776653 5566655542 11110 0000100 0110 0146899999999
Q ss_pred ccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHH
Q 015523 292 VAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHK 330 (405)
Q Consensus 292 ~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~ 330 (405)
... .. ...+.++++++.+.++||.+||.|..+|+.
T Consensus 100 ~~~-~~---~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~ 134 (289)
T 2v4u_A 100 FGI-RG---TLGKLQAISWARTKKIPFLGVXLGMQLAVI 134 (289)
T ss_dssp CSS-TT---HHHHHHHHHHHHHTTCCEEEETHHHHHHHH
T ss_pred CCc-hh---HHHHHHHHHHHHHcCCcEEEECccHHHHHH
Confidence 743 22 256889999999999999999999999986
No 114
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=96.08 E-value=0.0053 Score=54.35 Aligned_cols=96 Identities=18% Similarity=0.056 Sum_probs=60.3
Q ss_pred CcEEEEEecCC---CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchh-h
Q 015523 17 ALNVLVPVGFG---TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPG-S 92 (405)
Q Consensus 17 ~~ki~ill~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~-~ 92 (405)
..||+|+-+-. -...-+....+.|++.|+++..+.... + ..+.+. +.|+|++|||... .
T Consensus 31 ~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~--------------d-~~~~l~--~ad~I~lpGG~~~~~ 93 (229)
T 1fy2_A 31 RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVA--------------D-PLAAIE--KAEIIIVGGGNTFQL 93 (229)
T ss_dssp CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSS--------------C-HHHHHH--HCSEEEECCSCHHHH
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEeccc--------------c-HHHHHh--cCCEEEECCCcHHHH
Confidence 46888887652 122334556777888887665542110 0 112232 5899999999411 1
Q ss_pred hccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcC
Q 015523 93 VRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWG 130 (405)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ag 130 (405)
........+.+.|+++++++++++++|.| +.+|++..
T Consensus 94 ~~~l~~~gl~~~l~~~~~~G~p~~G~sAG-~~~l~~~~ 130 (229)
T 1fy2_A 94 LKESRERGLLAPMADRVKRGALYIGWSAG-ANLACPTI 130 (229)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCEEEEETHH-HHHTSSBS
T ss_pred HHHHHHCChHHHHHHHHHcCCEEEEECHH-HHhhcccc
Confidence 22223456788899999999999999995 54677643
No 115
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=96.05 E-value=0.016 Score=53.18 Aligned_cols=115 Identities=15% Similarity=0.148 Sum_probs=62.1
Q ss_pred CCCCcEEEEEecCC-CchhhHHHHHHHHHhcC--CEEEEEecCCCceeEeccCcEEecC-cccCCCCCCcccEEEEcCCc
Q 015523 14 PSFALNVLVPVGFG-TEEMEAVIIVDVLRRAG--AQVTMASVEPQLEVEASSGTRLVAD-TSISNCSHQVFDLIALPGGM 89 (405)
Q Consensus 14 ~~~~~ki~ill~~g-~~~~e~~~~~~~l~~~~--~~v~~vs~~~~~~v~~~~g~~v~~~-~~~~~~~~~~~d~liipgg~ 89 (405)
..+++||+||-.-. ....| .-+...|.... ++++++.+... .-+...--.+..- .++.+.....||++||-|+.
T Consensus 32 ~irplkI~ILnlmp~k~~te-~qf~rlL~~~~~qv~v~~~~~~~~-~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGap 109 (301)
T 2vdj_A 32 DIRALKIAILNLMPTKQETE-AQLLRLIGNTPLQLDVHLLHMESH-LSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAP 109 (301)
T ss_dssp TSCCEEEEEECCCSSHHHHH-HHHHHHHTCSSSCEEEEEECCCC-------------CCEECHHHHTTSCEEEEEECCCT
T ss_pred CCCCceEEEEeCCCCcCchH-HHHHHHhcCCCCcEEEEEEeccCC-CCCCccHHHHhhcccCcccccccccCEEEECCCC
Confidence 46789999997532 22222 34445555444 55655655443 1111111111111 02333333579999999994
Q ss_pred hhhhcc---ccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcC
Q 015523 90 PGSVRL---RDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWG 130 (405)
Q Consensus 90 ~~~~~~---~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ag 130 (405)
...... .--.++.++++...++++++.+||-|..+++..+|
T Consensus 110 ~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~ 153 (301)
T 2vdj_A 110 VETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHY 153 (301)
T ss_dssp TTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHH
T ss_pred CcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhC
Confidence 211111 11256778888888999999999998664344433
No 116
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=95.94 E-value=0.0058 Score=61.44 Aligned_cols=90 Identities=14% Similarity=0.002 Sum_probs=59.4
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCC-chhhh-c
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGG-MPGSV-R 94 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg-~~~~~-~ 94 (405)
|++|+|+-+.. ..+..+.+.|++.|+++.++.... . ..+ ..+|.||+||| ..... .
T Consensus 4 m~~I~Iid~~~---g~~~~~~~~l~~~G~~~~vv~~~~----------------~-~~l--~~~DglILpGgG~~~~~~~ 61 (555)
T 1jvn_A 4 MPVVHVIDVES---GNLQSLTNAIEHLGYEVQLVKSPK----------------D-FNI--SGTSRLILPGVGNYGHFVD 61 (555)
T ss_dssp SCEEEEECCSC---SCCHHHHHHHHHTTCEEEEESSGG----------------G-CCS--TTCSCEEEEECSCHHHHHH
T ss_pred CCEEEEEECCC---CCHHHHHHHHHHCCCEEEEECCcc----------------c-ccc--ccCCEEEECCCCchHhHhh
Confidence 46899997641 122456788888998888765211 0 112 26899999994 32111 1
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
...+..+.++|+++.++++||.+||.|-. +|+.+
T Consensus 62 ~l~~~~~~~~i~~~~~~g~PiLGIC~G~Q-lL~~a 95 (555)
T 1jvn_A 62 NLFNRGFEKPIREYIESGKPIMGIXVGLQ-ALFAG 95 (555)
T ss_dssp HHHHTTCHHHHHHHHHTTCCEEEEEHHHH-TTEEE
T ss_pred hhhhccHHHHHHHHHHcCCcEEEEchhhh-hhhhh
Confidence 11123457889999999999999999755 68874
No 117
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=95.94 E-value=0.033 Score=54.70 Aligned_cols=155 Identities=11% Similarity=0.041 Sum_probs=88.9
Q ss_pred EEEeCCeEcCCCcccHHHHHHHHHHHhcChHHHHHHHHhcccccccCccccccccccccc-----cCCcCEEEEEe-CCC
Q 015523 157 IHVSGEVTTSRGPGTSFEFALCLVEQLFGESVAKEIGELLLMHNADNSLKKEEFNEVEWF-----FDRMPRVLIPI-ANG 230 (405)
Q Consensus 157 ~v~dg~iiT~~g~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~V~il~-~~g 230 (405)
.|...+++.+.+..+..+.=+.+ ..+...+.+.+.|.++..+. .+..|..+..+ .....+|+++- |-+
T Consensus 231 ~V~~~~VI~i~DvdtiY~vpl~L----~~qGl~~~~~~~l~l~~~~~--~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~ 304 (535)
T 3nva_A 231 NVKVDHIVSSYDVETSYEVPIIL----ESQKLVSKILSRLKLEDRQV--DLTDWISFVNNIKGINSKKTINIALVGKYTK 304 (535)
T ss_dssp TCCGGGEEEEECCSCGGGHHHHH----HHHTHHHHHHHHTTCCCCCC--CCHHHHHHHHHHHTTTCCCEEEEEEEESCTT
T ss_pred CCChhceEecCCCChHHHhHHHH----HHCCcHHHHHHHcCCCCCCC--CHHHHHHHHHHhhccCCCCeeEEEEEecCcC
Confidence 34456677777766654332322 23455666777887764322 23333332211 12345677664 333
Q ss_pred CcHHHHHHHHHHHHhC----CCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcChHHHH
Q 015523 231 SEEIEIVTIVDILRRA----KVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKK 306 (405)
Q Consensus 231 ~~~~e~~~~~~~l~~~----~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~ 306 (405)
..+. ...+.+.|..+ +.++++...+.. .+... +. ...+++ .++|.|++|||.+.. .....++
T Consensus 305 l~Da-Y~Sv~eAL~hag~~~~~~V~I~wIds~-~l~~~-~~-----~~~~~L--~~~DgIIlpGG~G~~----~~~g~i~ 370 (535)
T 3nva_A 305 LKDS-YISIKEAIYHASAYIGVRPKLIWIEST-DLESD-TK-----NLNEIL--GNVNGIIVLPGFGSR----GAEGKIK 370 (535)
T ss_dssp SGGG-GHHHHHHHHHHHHHTTCEEEEEEEEGG-GGCCS-SS-----CCTTTT--TSCSEEEECCCCSST----THHHHHH
T ss_pred Cchh-HHHHHHHHHHHHHHcCCCeEEEEecch-hcccc-cc-----chhhhc--cCCCEEEECCCCCCc----cHHHHHH
Confidence 3322 23445555544 466776655543 22111 10 012333 789999999997432 2356788
Q ss_pred HHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 307 LLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 307 ~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
+++.+..+++|+.+||-|..+|+.+
T Consensus 371 ~ir~a~~~~~PiLGIClG~Qll~va 395 (535)
T 3nva_A 371 AIKYAREHNIPFLGICFGFQLSIVE 395 (535)
T ss_dssp HHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECcchhHHHHH
Confidence 9999999999999999999988643
No 118
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=95.57 E-value=0.032 Score=50.10 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=51.0
Q ss_pred HHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchh--hhcc-------------ccCh
Q 015523 35 IIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPG--SVRL-------------RDCE 99 (405)
Q Consensus 35 ~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~--~~~~-------------~~~~ 99 (405)
..++.+.++|..+.++.+... ..+.+. ...+|.|++|||. + +..+ ..+.
T Consensus 32 ~~~~~l~~aG~~pv~lp~~~~--------------~~~~~~-l~~~DGlil~GG~-~v~P~~yg~~~~~~~~~~~~~rd~ 95 (254)
T 3fij_A 32 RYVDAIQKVGGFPIALPIDDP--------------STAVQA-ISLVDGLLLTGGQ-DITPQLYLEEPSQEIGAYFPPRDS 95 (254)
T ss_dssp HHHHHHHHHTCEEEEECCCCG--------------GGHHHH-HHTCSEEEECCCS-CCCGGGGTCCCCTTCCCCCHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCc--------------hHHHHH-HhhCCEEEECCCC-CCChhhcCCccCcccCCcChhhhH
Confidence 356777788888887765432 001111 1258999999993 2 1111 1123
Q ss_pred HHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 100 ILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 100 ~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
..+++++++.++++||.+||-|-. +|+.+
T Consensus 96 ~~~~lir~a~~~~~PiLGIC~G~Q-ll~~a 124 (254)
T 3fij_A 96 YEIALVRAALDAGKPIFAICRGMQ-LVNVA 124 (254)
T ss_dssp HHHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 367899999999999999999755 67765
No 119
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=95.57 E-value=0.029 Score=56.31 Aligned_cols=93 Identities=15% Similarity=0.011 Sum_probs=56.4
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
...||+||=|-. .-...+...+++.|..++++..+.. ++++...++|.||+|||......
T Consensus 6 ~~~~IlilD~Gs---~~~~~I~r~lre~Gv~~eiv~~~~~----------------~~~i~~~~~dgIIlsGGp~s~~~- 65 (556)
T 3uow_A 6 EYDKILVLNFGS---QYFHLIVKRLNNIKIFSETKDYGVE----------------LKDIKDMNIKGVILSGGPYSVTE- 65 (556)
T ss_dssp -CCEEEEEESSC---TTHHHHHHHHHHTTCCEEEEETTCC----------------GGGTTTSCEEEEEECCCSCCTTS-
T ss_pred CCCEEEEEECCC---ccHHHHHHHHHHCCCeEEEEECCCC----------------HHHHhhcCCCEEEECCCCCcccc-
Confidence 345787775432 2234567888899999888865421 12232236899999999422211
Q ss_pred ccChHHH-HHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 96 RDCEILK-KITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 96 ~~~~~~~-~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
...+.+. ..++.+.++++||.+||.|-. +|+.+
T Consensus 66 ~~~~~~~~~l~~~a~~~g~PvLGIC~G~Q-lLa~~ 99 (556)
T 3uow_A 66 AGSPHLKKEVFEYFLEKKIPIFGICYGMQ-EIAVQ 99 (556)
T ss_dssp TTCCCCCHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred cCCcchhHHHHHHhhhcCCCEEEECHHHH-HHHHH
Confidence 1112222 334445677999999999765 57754
No 120
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=95.30 E-value=0.047 Score=55.70 Aligned_cols=89 Identities=22% Similarity=0.251 Sum_probs=61.1
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhh-
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQ- 299 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~- 299 (405)
++|.|+=+-.. . ...+...|.+.|+.++++..+. + .+. .++|.||++||.+......
T Consensus 447 k~IlviD~gds-f--~~~l~~~l~~~G~~v~Vv~~d~--~---------------~~~--~~~DgIIlsGGPg~p~d~~~ 504 (645)
T 3r75_A 447 CRALIVDAEDH-F--TAMIAQQLSSLGLATEVCGVHD--A---------------VDL--ARYDVVVMGPGPGDPSDAGD 504 (645)
T ss_dssp CEEEEEESSCT-H--HHHHHHHHHHTTCEEEEEETTC--C---------------CCG--GGCSEEEECCCSSCTTCTTS
T ss_pred CEEEEEECCcc-H--HHHHHHHHHHCCCEEEEEECCC--c---------------ccc--cCCCEEEECCCCCChhhhhh
Confidence 56666632221 1 2357788888999988875543 1 112 4689999999875433211
Q ss_pred -cChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 300 -KSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 300 -~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
....+.++|+++...++||.+||-|..+|+.+
T Consensus 505 p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~a 537 (645)
T 3r75_A 505 PRIARLYAWLRHLIDEGKPFMAVCLSHQILNAI 537 (645)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
Confidence 11246788898889999999999999999875
No 121
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=95.15 E-value=0.034 Score=55.48 Aligned_cols=88 Identities=15% Similarity=0.019 Sum_probs=55.9
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhc
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQK 300 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~ 300 (405)
.+|+|+=|-.-.. ..+...+++.|..++++..+. ..+++....+|.||+|||.....
T Consensus 11 ~~I~IlD~g~~~~---~~i~r~lr~~Gv~~~i~p~~~----------------~~~~i~~~~~dgIILsGGp~sv~---- 67 (527)
T 3tqi_A 11 HRILILDFGSQYA---QLIARRVREIGVYCELMPCDI----------------DEETIRDFNPHGIILSGGPETVT---- 67 (527)
T ss_dssp SEEEEEECSCTTH---HHHHHHHHHHTCEEEEEETTC----------------CSSSSTTTCCSEEEECCCCC-------
T ss_pred CeEEEEECCCccH---HHHHHHHHHCCCeEEEEECCC----------------CHHHHHhcCCCEEEECCcCcccc----
Confidence 5788886543222 356778888898888774332 22333223579999999964322
Q ss_pred ChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 301 SRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 301 ~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
+.......+..++.++||.+||.|..+|+.+
T Consensus 68 ~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~ 98 (527)
T 3tqi_A 68 LSHTLRAPAFIFEIGCPVLGICYGMQTMAYQ 98 (527)
T ss_dssp ------CCCSTTTSSSCEEEETHHHHHHHHH
T ss_pred cCCChhhHHHHHhcCCCEEEEChHHHHHHHH
Confidence 1222333455678899999999999999875
No 122
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=95.00 E-value=0.02 Score=52.00 Aligned_cols=96 Identities=10% Similarity=0.127 Sum_probs=56.9
Q ss_pred cEEEEEecCC--CchhhHHHHHHHHHh----cCCEEEEEecCCCceeEeccCcEEecCccc-CCCCCCcccEEEEcCCch
Q 015523 18 LNVLVPVGFG--TEEMEAVIIVDVLRR----AGAQVTMASVEPQLEVEASSGTRLVADTSI-SNCSHQVFDLIALPGGMP 90 (405)
Q Consensus 18 ~ki~ill~~g--~~~~e~~~~~~~l~~----~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~-~~~~~~~~d~liipgg~~ 90 (405)
.||+|+.-.+ +.+ .+..+...|.. .+.++.++..+.. .+....+.. + ..+ ..+|.||+|||.
T Consensus 9 ~~Iaivg~y~~~~~d-ny~S~~~aL~~~g~~~~~~v~v~~~~~~-~~~~~~~~~------~~~~~--~~~dgiil~GG~- 77 (273)
T 2w7t_A 9 VRIAFVGKYLQDAGD-TYFSVLQCFEHCQIALQVRLDILYVDSE-ELEGPNADE------ARKAL--LGCDGIFVPGGF- 77 (273)
T ss_dssp EEEEEEECCHHHHTT-TTHHHHHHHHHHHHHHTCCEEEEEEEGG-GGSSTTTHH------HHHHH--HTCSEEEECCCC-
T ss_pred CEEEEEeCCCcCCch-HHHHHHHHHHHHHHhcCCceEEeccChh-hcccccchh------HHHHH--hhCCEEEecCCC-
Confidence 6899984221 122 44555555543 3566777765543 222111100 1 112 258999999994
Q ss_pred hhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhh
Q 015523 91 GSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLP 128 (405)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ 128 (405)
+.. ..+...++++++.+.++||.+||-|-. +|+.
T Consensus 78 ~~~---~~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~ 111 (273)
T 2w7t_A 78 GNR---GVDGKCAAAQVARMNNIPYFGVXLGMQ-VAVI 111 (273)
T ss_dssp TTT---THHHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred CCc---CchhHHHHHHHHHHCCCcEEEECcCHH-HHHH
Confidence 332 223577889988889999999999766 5653
No 123
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=94.83 E-value=0.097 Score=53.37 Aligned_cols=89 Identities=13% Similarity=0.143 Sum_probs=58.9
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
.+++|.|+=+.+ +=...+...|++.|++++++..+.. .+. .++|.|||+||......
T Consensus 445 ~Gk~IlviD~gd---sf~~~l~~~l~~~G~~v~Vv~~d~~-----------------~~~--~~~DgIIlsGGPg~p~d- 501 (645)
T 3r75_A 445 SGCRALIVDAED---HFTAMIAQQLSSLGLATEVCGVHDA-----------------VDL--ARYDVVVMGPGPGDPSD- 501 (645)
T ss_dssp TTCEEEEEESSC---THHHHHHHHHHHTTCEEEEEETTCC-----------------CCG--GGCSEEEECCCSSCTTC-
T ss_pred CCCEEEEEECCc---cHHHHHHHHHHHCCCEEEEEECCCc-----------------ccc--cCCCEEEECCCCCChhh-
Confidence 356776663222 2234577888889999988865541 011 36899999998422221
Q ss_pred ccC---hHHHHHHHHHHHcCCEEEEEccchHHhhhh
Q 015523 96 RDC---EILKKITSKQAEEKRLYGAICAAPAVTLLP 128 (405)
Q Consensus 96 ~~~---~~~~~~l~~~~~~~~~i~aic~g~~~~La~ 128 (405)
... ..+.++|+++.+.++||.+||-|-. +|+.
T Consensus 502 ~~~p~i~~~~~lI~~a~~~~iPiLGIClG~Q-lLa~ 536 (645)
T 3r75_A 502 AGDPRIARLYAWLRHLIDEGKPFMAVCLSHQ-ILNA 536 (645)
T ss_dssp TTSHHHHHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred hhhhhHHHHHHHHHHHHHCCCCEEEECHHHH-HHHH
Confidence 111 2367788888999999999999766 5664
No 124
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=94.78 E-value=0.02 Score=52.44 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=59.8
Q ss_pred CCcEEEEE-ecCCCchhh-HHHHHHHHHhcCC----EEEEEecCCCceeEeccCcEEecCcc-cCCC--CCCcccEEEEc
Q 015523 16 FALNVLVP-VGFGTEEME-AVIIVDVLRRAGA----QVTMASVEPQLEVEASSGTRLVADTS-ISNC--SHQVFDLIALP 86 (405)
Q Consensus 16 ~~~ki~il-l~~g~~~~e-~~~~~~~l~~~~~----~v~~vs~~~~~~v~~~~g~~v~~~~~-~~~~--~~~~~d~liip 86 (405)
..+||+|+ =|.+ ..+ +..+.+.|+.+|+ ++.++..+.. .+... .+..+.. ++++ ...++|.||+|
T Consensus 24 ~~~~Iavv~d~~~--~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~l~~~dgiil~ 97 (289)
T 2v4u_A 24 KICSIALVGKYTK--LRDCYASVFKALEHSALAINHKLNLMYIDSI-DLEKI---TETEDPVKFHEAWQKLCKADGILVP 97 (289)
T ss_dssp EEEEEEEEESCSS--CCGGGHHHHHHHHHHHHHTTEEEEEEEEEGG-GGSHH---HHHHCHHHHHHHHHHHHHCSEEEEC
T ss_pred CceEEEEEecCcC--CCccHHHHHHHHHHhhhhhCCceEEEEechh-hcccc---cccCChhhhhhHHHHHhhCCEEEec
Confidence 34688887 4423 333 4577788876643 4555554432 11110 1111111 0010 01258999999
Q ss_pred CCchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhh
Q 015523 87 GGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLP 128 (405)
Q Consensus 87 gg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ 128 (405)
||. +... .....++++++.+.++||.+||.|.. +|+.
T Consensus 98 GG~-~~~~---~~~~~~~i~~~~~~~~PilGIC~G~Q-~l~~ 134 (289)
T 2v4u_A 98 GGF-GIRG---TLGKLQAISWARTKKIPFLGVXLGMQ-LAVI 134 (289)
T ss_dssp SCC-SSTT---HHHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred CCC-Cchh---HHHHHHHHHHHHHcCCcEEEECccHH-HHHH
Confidence 994 3322 25688999999999999999999766 5665
No 125
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=94.55 E-value=0.03 Score=51.97 Aligned_cols=96 Identities=17% Similarity=0.128 Sum_probs=56.9
Q ss_pred cEEEEEecCCCch--------hhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCc
Q 015523 18 LNVLVPVGFGTEE--------MEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGM 89 (405)
Q Consensus 18 ~ki~ill~~g~~~--------~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~ 89 (405)
..|||+...+... .-.....+.|+++|.++.++..+.. + ..+.+. ...+|.||+|||.
T Consensus 31 P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~-~------------~~i~~~-l~~~dglil~GG~ 96 (315)
T 1l9x_A 31 PIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLT-E------------KDYEIL-FKSINGILFPGGS 96 (315)
T ss_dssp CEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCC-H------------HHHHHH-HHHSSEEEECCCC
T ss_pred CEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEEecCCC-H------------HHHHHH-HhcCCEEEEeCCC
Confidence 5899987643211 0112457888888998888765432 0 011111 1258999999994
Q ss_pred hhhhcc--c-cChHHHHHHHHHHHcC--CEEEEEccchHHhhhh
Q 015523 90 PGSVRL--R-DCEILKKITSKQAEEK--RLYGAICAAPAVTLLP 128 (405)
Q Consensus 90 ~~~~~~--~-~~~~~~~~l~~~~~~~--~~i~aic~g~~~~La~ 128 (405)
...... . ....+.++++++.+++ +||.+||-|-. +|+.
T Consensus 97 ~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Q-ll~~ 139 (315)
T 1l9x_A 97 VDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFE-ELSL 139 (315)
T ss_dssp CCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHH-HHHH
T ss_pred cccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHH-HHHH
Confidence 222111 0 1135667777776664 99999999766 5664
No 126
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=94.01 E-value=0.05 Score=54.26 Aligned_cols=88 Identities=16% Similarity=0.035 Sum_probs=53.4
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLR 96 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~ 96 (405)
..||+||=|-+- -...+...+++.|..++++..+.. .+++....+|.||+|||. ...
T Consensus 10 ~~~I~IlD~g~~---~~~~i~r~lr~~Gv~~~i~p~~~~----------------~~~i~~~~~dgIILsGGp-~sv--- 66 (527)
T 3tqi_A 10 QHRILILDFGSQ---YAQLIARRVREIGVYCELMPCDID----------------EETIRDFNPHGIILSGGP-ETV--- 66 (527)
T ss_dssp CSEEEEEECSCT---THHHHHHHHHHHTCEEEEEETTCC----------------SSSSTTTCCSEEEECCCC-C-----
T ss_pred CCeEEEEECCCc---cHHHHHHHHHHCCCeEEEEECCCC----------------HHHHHhcCCCEEEECCcC-ccc---
Confidence 358888855322 224567888999999988854321 122222257999999994 221
Q ss_pred cChHHHHHHHHHHHcCCEEEEEccchHHhhhh
Q 015523 97 DCEILKKITSKQAEEKRLYGAICAAPAVTLLP 128 (405)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ 128 (405)
.++......++.++.++||.+||.|-. +|+.
T Consensus 67 ~~~~~~~~~~~~~~~~~PvLGIC~G~Q-lla~ 97 (527)
T 3tqi_A 67 TLSHTLRAPAFIFEIGCPVLGICYGMQ-TMAY 97 (527)
T ss_dssp -------CCCSTTTSSSCEEEETHHHH-HHHH
T ss_pred ccCCChhhHHHHHhcCCCEEEEChHHH-HHHH
Confidence 112223334556778999999999765 5665
No 127
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=93.73 E-value=0.18 Score=42.95 Aligned_cols=90 Identities=14% Similarity=0.132 Sum_probs=51.6
Q ss_pred EEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCc-cCcCCCCccEEEEcCCccchHhhhc
Q 015523 222 RVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSI-SDAAESVYDLIILPGGVAGAERLQK 300 (405)
Q Consensus 222 ~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l-~~~~~~~~D~livpgG~~~~~~~~~ 300 (405)
+|+|+=.-+.. .......|++.|+++.++..+.. . + .+ +.+...+.|.+++.||.+....
T Consensus 2 ~i~iiDn~~s~---~~~i~~~l~~~G~~~~v~~~~~~--~----------~-~i~~~l~~~~~~~iil~gGpg~~~~--- 62 (192)
T 1i1q_B 2 DILLLDNIDSF---TWNLADQLRTNGHNVVIYRNHIP--A----------Q-TLIDRLATMKNPVLMLSPGPGVPSE--- 62 (192)
T ss_dssp EEEEEECSCSS---HHHHHHHHHHTTCEEEEEETTSC--S----------H-HHHHHHTTCSSEEEEECCCSSCGGG---
T ss_pred cEEEEECCccH---HHHHHHHHHHCCCeEEEEECCCC--H----------H-HHHHHhhhccCCeEEECCCCcCchh---
Confidence 56666532222 23457788888998887754421 0 0 11 1111113444666666544322
Q ss_pred ChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 301 SRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 301 ~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
.....++++ ...+++||.+||-|..+|+.+
T Consensus 63 ~~~~~~l~~-~~~~~~PilGIC~G~Qll~~~ 92 (192)
T 1i1q_B 63 AGCMPELLT-RLRGKLPIIGICLGHQAIVEA 92 (192)
T ss_dssp STTHHHHHH-HHBTTBCEEEETHHHHHHHHH
T ss_pred CchHHHHHH-HHhcCCCEEEECcChHHHHHH
Confidence 223344444 456899999999999999875
No 128
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=93.65 E-value=0.061 Score=49.90 Aligned_cols=98 Identities=17% Similarity=0.147 Sum_probs=60.3
Q ss_pred cCEEEEEeCCCCcH--HH------HHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCC
Q 015523 220 MPRVLIPIANGSEE--IE------IVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGG 291 (405)
Q Consensus 220 ~~~V~il~~~g~~~--~e------~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG 291 (405)
++.|+|....+... .+ .....+.|.++|..+.++..+.. ++ .+.+. ..++|.||+|||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~------------~~-~i~~~-l~~~dglil~GG 95 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLT------------EK-DYEIL-FKSINGILFPGG 95 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCC------------HH-HHHHH-HHHSSEEEECCC
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEEecCCC------------HH-HHHHH-HhcCCEEEEeCC
Confidence 46899987643221 00 12357888888988887754431 00 11110 136899999999
Q ss_pred ccchHhh---hcChHHHHHHHHHhhcC--CEEEEEchHHHHHHHc
Q 015523 292 VAGAERL---QKSRILKKLLKEQKVAG--RIYGAVCSSPIVLHKH 331 (405)
Q Consensus 292 ~~~~~~~---~~~~~l~~~l~~~~~~~--k~i~aic~g~~~La~a 331 (405)
..+.... .....++++++++..+| +||.+||-|..+|+.+
T Consensus 96 ~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a 140 (315)
T 1l9x_A 96 SVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLL 140 (315)
T ss_dssp CCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHH
T ss_pred CcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHH
Confidence 6332111 01135677777776654 9999999999999754
No 129
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=93.64 E-value=0.06 Score=53.66 Aligned_cols=88 Identities=17% Similarity=0.052 Sum_probs=56.8
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhc
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQK 300 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~ 300 (405)
++|+|+=|.+-.. ..+...|++.|..++++..+. ..+++....+|.||+|||....... .
T Consensus 8 ~~IlIlD~g~~~~---~~i~r~lr~~G~~~~i~p~~~----------------~~~~i~~~~~dgiILsGGp~s~~~~-~ 67 (525)
T 1gpm_A 8 HRILILDFGSQYT---QLVARRVRELGVYCELWAWDV----------------TEAQIRDFNPSGIILSGGPESTTEE-N 67 (525)
T ss_dssp SEEEEEECSCTTH---HHHHHHHHHTTCEEEEEESCC----------------CHHHHHHHCCSEEEECCCSSCTTST-T
T ss_pred CEEEEEECCCccH---HHHHHHHHHCCCEEEEEECCC----------------CHHHHhccCCCEEEECCcCcccccc-C
Confidence 6788886654332 446788899999888775432 1222211246999999997433221 1
Q ss_pred ChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 301 SRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 301 ~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
.+.+ .+.....++||.+||-|..+|+.+
T Consensus 68 ~~~~---~~~~~~~g~PvLGIC~G~Qlla~~ 95 (525)
T 1gpm_A 68 SPRA---PQYVFEAGVPVFGVCYGMQTMAMQ 95 (525)
T ss_dssp CCCC---CGGGGTSSSCEEEETHHHHHHHHH
T ss_pred Ccch---HHHHHHCCCCEEEEChHHHHHHHH
Confidence 1111 234567899999999999999874
No 130
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=93.12 E-value=0.13 Score=51.14 Aligned_cols=226 Identities=12% Similarity=0.010 Sum_probs=115.0
Q ss_pred cccEEEEcCCchhhhccccChHHHHHHHHHHHc-CC-EEEEEccchHHhhhhcCCCCCcceeeccCccccCCC-Cc----
Q 015523 79 VFDLIALPGGMPGSVRLRDCEILKKITSKQAEE-KR-LYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT-FW---- 151 (405)
Q Consensus 79 ~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~-~~-~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~-~~---- 151 (405)
+||++|+=|| .... -..+-.+.+.++++..+ |+ -++.+-..-.-+|..+|-++-+. |=|- ...|+. ..
T Consensus 133 ~~d~~i~e~~-gt~~-di~~~~~~~~~~q~~~~~~~~~~~~~h~~~~p~~~~~ge~ktkp-tq~s--v~~l~s~gi~pd~ 207 (545)
T 1s1m_A 133 GHDVVLVEIG-GTVG-DIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKP-TQHS--VKELLSIGIQPDI 207 (545)
T ss_dssp TCSEEEEEEC-SCTT-SSTTHHHHHHHHHHHHHHCTTSEEEEEEEECCEETTTTEECCHH-HHHH--HHHHHTTTCCCSE
T ss_pred cCCEEEEECC-CChh-hhhChHHHHHHHHHhHhhCcCcEEEEEEeCcccccCCCCcCCCC-CcCC--HHHHhCCCCccCE
Confidence 6899999876 2333 23566777777776532 21 22222221333567777665432 3331 122222 00
Q ss_pred ------------ccc----CcEEEeCCeEcCCCcccHHHHHHHHHHHhcChHHHHHHHHhccccc-ccCccccccccccc
Q 015523 152 ------------AVK----SNIHVSGEVTTSRGPGTSFEFALCLVEQLFGESVAKEIGELLLMHN-ADNSLKKEEFNEVE 214 (405)
Q Consensus 152 ------------~~~----~~~v~dg~iiT~~g~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~-~~~~~~~~~~~~~~ 214 (405)
+.. .-++...+++...+..+-.++-+.+=+ .|. .+.+.+.+..+. .++...++.+-...
T Consensus 208 lv~R~~~~~~~~~r~kisL~~~v~~~~Vi~~~dvdt~y~lp~~lr~--~G~--~~~ii~~~~l~~~~~~l~~w~~lv~~v 283 (545)
T 1s1m_A 208 LICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKS--QGL--DDYICKRFSLNCPEANLSEWEQVIFEE 283 (545)
T ss_dssp EEEEESSCCCHHHHHHHHHTTCCCSSCEEEEECCSCGGGHHHHHHH--TTH--HHHHHHHTTCCCCCCCCHHHHHHHHHH
T ss_pred EEEeCCCCCCchhhccCChhhCccccCceecCCCChHHHHHHHHHH--cCC--hhhhhhhCCCCchhHHHHHHHHHHHhc
Confidence 000 125666788988888776656555543 233 333444554431 11111111111000
Q ss_pred cccCCcCEEEEEe-CCCCcHHHHHHHHHHHHhCCC----eEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEc
Q 015523 215 WFFDRMPRVLIPI-ANGSEEIEIVTIVDILRRAKV----DVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILP 289 (405)
Q Consensus 215 ~~~~~~~~V~il~-~~g~~~~e~~~~~~~l~~~~~----~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livp 289 (405)
.......+|++.- +-...+ -...+...|..+++ ++.+...+.. .+.. + +++ ...++|.|++|
T Consensus 284 ~~~~~~v~i~~vGkyv~l~D-~y~Si~~aL~~~G~~~~~~V~i~~~d~e-~i~~--------~--~~~-~l~~~DGIils 350 (545)
T 1s1m_A 284 ANPVSEVTIGMVGKYIELPD-AYKSVIEALKHGGLKNRVSVNIKLIDSQ-DVET--------R--GVE-ILKGLDAILVP 350 (545)
T ss_dssp HCCSEEEEEEEEESSCSSGG-GGHHHHHHHHHHHHHHTEEEEEEEEEHH-HHHH--------H--CTT-TTTTCSEEEEC
T ss_pred cCCCCeEEeCCcCCeEEEEE-HHHHHHHHHHHhCcccCCeEEEccCCHH-Hhhh--------h--hhh-hhhcCCEEEEC
Confidence 0011123555431 111111 22345556666653 4454443321 1110 0 111 12578999999
Q ss_pred CCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHH
Q 015523 290 GGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHK 330 (405)
Q Consensus 290 gG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~ 330 (405)
||.+... ....+++++++...++|+.+||-|..+|+.
T Consensus 351 GGpg~~~----~~g~~~~i~~a~~~~~PiLGIClG~Qll~v 387 (545)
T 1s1m_A 351 GGFGYRG----VEGMITTARFARENNIPYLGICLGMQVALI 387 (545)
T ss_dssp CCCSSTT----HHHHHHHHHHHHHTTCCEEEETHHHHHHHH
T ss_pred CCCCCcc----chhhHHHHHHHHHCCCcEEEECChHHHHHH
Confidence 9975422 245778899888899999999999999984
No 131
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=92.95 E-value=0.31 Score=44.42 Aligned_cols=97 Identities=14% Similarity=0.080 Sum_probs=65.4
Q ss_pred CEEEEEeCCCCcHHH-HHHHHHHHHhCCC-eEEEEeecCCceeecCCCcEEeeCC-CccCcCCCCccEEEEcCCccchHh
Q 015523 221 PRVLIPIANGSEEIE-IVTIVDILRRAKV-DVVVASVERSTQIVASQGVKIIADK-SISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 221 ~~V~il~~~g~~~~e-~~~~~~~l~~~~~-~v~~vs~~~~~~v~~~~g~~v~~~~-~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
.||+++-+-.-.+.+ .....+.|.+.|+ +++++..... . . ..+. ..+.+ .+.|+|+++||. ...
T Consensus 57 ~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r-~-~-------a~~~~~~~~l--~~ad~I~v~GGn--t~~ 123 (291)
T 3en0_A 57 AIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDR-A-Q-------GDDSGYRLFV--EQCTGIFMTGGD--QLR 123 (291)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSG-G-G-------GGCHHHHHHH--HHCSEEEECCSC--HHH
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCc-c-c-------cCCHHHHHHH--hcCCEEEECCCC--HHH
Confidence 678888654433322 3446778888898 6777655431 0 0 0010 01223 568999999994 433
Q ss_pred ---hhcChHHHHHHHHHhhcC-CEEEEEchHHHHHHH
Q 015523 298 ---LQKSRILKKLLKEQKVAG-RIYGAVCSSPIVLHK 330 (405)
Q Consensus 298 ---~~~~~~l~~~l~~~~~~~-k~i~aic~g~~~La~ 330 (405)
......+.+.|++.+++| .++++.|+|+.++..
T Consensus 124 l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~~ 160 (291)
T 3en0_A 124 LCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMGH 160 (291)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTSS
T ss_pred HHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhhH
Confidence 456788999999999999 899999999998753
No 132
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=92.72 E-value=0.12 Score=51.39 Aligned_cols=228 Identities=14% Similarity=0.035 Sum_probs=112.9
Q ss_pred cccEEEEcCCchhhhccccChHHHHHHHHHHHc-C-CEEEEEccchHHhhhhcCCCCCcceeeccCccccCCC-Ccccc-
Q 015523 79 VFDLIALPGGMPGSVRLRDCEILKKITSKQAEE-K-RLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPT-FWAVK- 154 (405)
Q Consensus 79 ~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~-~-~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~-~~~~~- 154 (405)
+||++|+=|| .... -.++..+.+.+|++..+ | .-++.+-..-.-+|..+|-++.+. |=|- ...|+. ....+
T Consensus 144 ~~d~~i~e~~-gt~~-di~~~~~~~~~rq~~~~~~~~~~~~~h~~~~p~~~~~~e~ktkp-tq~s--v~~lrs~gi~pd~ 218 (550)
T 1vco_A 144 KAEIVVVEVG-GTVG-DIESLPFLEAIRQFRFDEGEGNTLYLHLTLVPYLETSEEFKTKP-TQHS--VATLRGVGIQPDI 218 (550)
T ss_dssp TCSEEEEEEC-SCTT-SSTTHHHHHHHHTHHHHHCTTSEEEEEEEECCEETTTTEECCHH-HHHH--HHHHHHTTCCCSE
T ss_pred CCCEEEEECC-CChh-HhhhHHHHHHHHHHhHhhCcCCEEEEEEeCeecccCCCCcCCCC-cchh--HHHHhcCCCccCE
Confidence 6899999765 2233 23566777778776533 2 122222221233567777666543 2231 111221 11111
Q ss_pred -------------------CcEEEeCCeEcCCCcccHHHHHHHHHHHhcChHHHHHHHHhccccc-ccCccccccccccc
Q 015523 155 -------------------SNIHVSGEVTTSRGPGTSFEFALCLVEQLFGESVAKEIGELLLMHN-ADNSLKKEEFNEVE 214 (405)
Q Consensus 155 -------------------~~~v~dg~iiT~~g~~~~~~~~l~ii~~~~g~~~a~~~a~~l~~~~-~~~~~~~~~~~~~~ 214 (405)
.-++...+++...+..+-.++.+.+=++ |. .+.+.+.+..+. .++...+..+....
T Consensus 219 lvvR~~~~~~~~~r~k~sL~~~v~~~~Vi~~~dvdt~y~lp~~lr~~--G~--~~~v~~~~~l~~~~~~l~~w~~~~~~~ 294 (550)
T 1vco_A 219 LVLRSARPVPEEVRRKVALFTNVRPGHVFSSPTVEHLYEVPLLLEEQ--GL--GRAVERALGLEAVIPNLSFWQEAVRVL 294 (550)
T ss_dssp EEEEESSCCCHHHHHHHHHHHTCCGGGEEEEECCSCTTHHHHHHHHH--TH--HHHHHHHTTCCCCCCCCHHHHHHHHHH
T ss_pred EEEeCCCCCCcchhcccchhcCCCccCeeecCCCChHHHHHHHHHHc--CC--hhhhHhhCCCCchhHHHHHhHHHHHhh
Confidence 0144556788888877766565554332 33 333444544432 11111111111100
Q ss_pred cccCCcCEEEEE-----eCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEc
Q 015523 215 WFFDRMPRVLIP-----IANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILP 289 (405)
Q Consensus 215 ~~~~~~~~V~il-----~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livp 289 (405)
.......+|++. +.|... +=.-.+...+...|.++.+...+.. .+. ++ .+++. ...+|.|++|
T Consensus 295 ~~~~~~v~I~ivgkyv~l~D~y~-Sv~~aL~~~g~~~g~~v~I~~~d~~-~~~--------~~-~~~~~-L~~~DGIILp 362 (550)
T 1vco_A 295 KHPERTVKIAIAGKYVKMPDAYL-SLLEALRHAGIKNRARVEVKWVDAE-SLE--------AA-DLEEA-FRDVSGILVP 362 (550)
T ss_dssp HSCSEEEEEEEEESCC---CTTH-HHHHHHHHHHHHTTEEEEEEEEEGG-GC----------C-CHHHH-TTTCSCEEEC
T ss_pred cCCCCceEEcccCCeEEEEecHH-HHHHHHHHHHHHcCCeEEEEEeCcc-ccc--------cc-hHHHH-HhcCCEEEEC
Confidence 011122344432 233321 1111233344445677777644331 111 11 12111 2578999999
Q ss_pred CCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 290 GGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 290 gG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
||.+... ....++.++.+..+++|+.+||-|..+|+.+
T Consensus 363 GGfGd~~----~~g~i~~ir~a~e~~iPiLGICLGmQlL~~a 400 (550)
T 1vco_A 363 GGFGVRG----IEGKVRAAQYARERKIPYLGICLGLQIAVIE 400 (550)
T ss_dssp CCCSSTT----HHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred CCCCCcc----hhhhHHHHHHHHHCCCcEEEECcCHHHHHHH
Confidence 9975432 2346788888888999999999999999754
No 133
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=91.28 E-value=0.48 Score=40.17 Aligned_cols=90 Identities=12% Similarity=0.143 Sum_probs=49.3
Q ss_pred EEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCccc-CCCCCCcccEEEEcCCchhhhcccc
Q 015523 19 NVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSI-SNCSHQVFDLIALPGGMPGSVRLRD 97 (405)
Q Consensus 19 ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~-~~~~~~~~d~liipgg~~~~~~~~~ 97 (405)
||+|+=+.+.. ...+.+.|++.|+++.++..+.. . ..+ +.+...++|.+|+.||..... +
T Consensus 2 ~i~iiDn~~s~---~~~i~~~l~~~G~~~~v~~~~~~--~-----------~~i~~~l~~~~~~~iil~gGpg~~~---~ 62 (192)
T 1i1q_B 2 DILLLDNIDSF---TWNLADQLRTNGHNVVIYRNHIP--A-----------QTLIDRLATMKNPVLMLSPGPGVPS---E 62 (192)
T ss_dssp EEEEEECSCSS---HHHHHHHHHHTTCEEEEEETTSC--S-----------HHHHHHHTTCSSEEEEECCCSSCGG---G
T ss_pred cEEEEECCccH---HHHHHHHHHHCCCeEEEEECCCC--H-----------HHHHHHhhhccCCeEEECCCCcCch---h
Confidence 56666522221 24557888888999888765421 0 001 001111234466666632222 2
Q ss_pred ChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 98 CEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 98 ~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
.....+++ +..++++||.+||-|-. +|+.+
T Consensus 63 ~~~~~~l~-~~~~~~~PilGIC~G~Q-ll~~~ 92 (192)
T 1i1q_B 63 AGCMPELL-TRLRGKLPIIGICLGHQ-AIVEA 92 (192)
T ss_dssp STTHHHHH-HHHBTTBCEEEETHHHH-HHHHH
T ss_pred CchHHHHH-HHHhcCCCEEEECcChH-HHHHH
Confidence 22333334 45678999999999766 67764
No 134
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=90.54 E-value=0.14 Score=50.91 Aligned_cols=88 Identities=14% Similarity=0.076 Sum_probs=53.8
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLR 96 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~ 96 (405)
.+||+||=+.+-. ...+...+++.|..++++..+.. + ..+.+. .+|.||+|||...... .
T Consensus 7 ~~~IlIlD~g~~~---~~~i~r~lr~~G~~~~i~p~~~~-~------------~~i~~~---~~dgiILsGGp~s~~~-~ 66 (525)
T 1gpm_A 7 KHRILILDFGSQY---TQLVARRVRELGVYCELWAWDVT-E------------AQIRDF---NPSGIILSGGPESTTE-E 66 (525)
T ss_dssp SSEEEEEECSCTT---HHHHHHHHHHTTCEEEEEESCCC-H------------HHHHHH---CCSEEEECCCSSCTTS-T
T ss_pred CCEEEEEECCCcc---HHHHHHHHHHCCCEEEEEECCCC-H------------HHHhcc---CCCEEEECCcCccccc-c
Confidence 3579888655422 24567889999999888864431 0 111222 3699999999422211 1
Q ss_pred cChHHHHHHHHHHHcCCEEEEEccchHHhhhh
Q 015523 97 DCEILKKITSKQAEEKRLYGAICAAPAVTLLP 128 (405)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ 128 (405)
..+.+ .++.++.++||.+||.|-. +|+.
T Consensus 67 ~~~~~---~~~~~~~g~PvLGIC~G~Q-lla~ 94 (525)
T 1gpm_A 67 NSPRA---PQYVFEAGVPVFGVCYGMQ-TMAM 94 (525)
T ss_dssp TCCCC---CGGGGTSSSCEEEETHHHH-HHHH
T ss_pred CCcch---HHHHHHCCCCEEEEChHHH-HHHH
Confidence 11222 2345578999999999766 5665
No 135
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=89.92 E-value=0.26 Score=48.42 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=56.1
Q ss_pred CCcEEEEEe-cCCCchhhHHHHHHHHHh----cCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCch
Q 015523 16 FALNVLVPV-GFGTEEMEAVIIVDVLRR----AGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMP 90 (405)
Q Consensus 16 ~~~ki~ill-~~g~~~~e~~~~~~~l~~----~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~ 90 (405)
...+||++- |-+.. ..+..+.+.|.- .+.++++...+.. .+... +. ...+.+ ..+|.+++|||+.
T Consensus 292 ~~v~IalVGKY~~l~-DaY~Sv~eAL~hag~~~~~~V~I~wIds~-~l~~~-~~-----~~~~~L--~~~DgIIlpGG~G 361 (535)
T 3nva_A 292 KTINIALVGKYTKLK-DSYISIKEAIYHASAYIGVRPKLIWIEST-DLESD-TK-----NLNEIL--GNVNGIIVLPGFG 361 (535)
T ss_dssp CEEEEEEEESCTTSG-GGGHHHHHHHHHHHHHTTCEEEEEEEEGG-GGCCS-SS-----CCTTTT--TSCSEEEECCCCS
T ss_pred CeeEEEEEecCcCCc-hhHHHHHHHHHHHHHHcCCCeEEEEecch-hcccc-cc-----chhhhc--cCCCEEEECCCCC
Confidence 445677664 22222 233444555543 3556666554442 12111 10 011233 3699999999952
Q ss_pred hhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhh
Q 015523 91 GSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLL 127 (405)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La 127 (405)
.. ......++++.+.++++|+.+||.|-. +|+
T Consensus 362 -~~---~~~g~i~~ir~a~~~~~PiLGIClG~Q-ll~ 393 (535)
T 3nva_A 362 -SR---GAEGKIKAIKYAREHNIPFLGICFGFQ-LSI 393 (535)
T ss_dssp -ST---THHHHHHHHHHHHHHTCCEEEETHHHH-HHH
T ss_pred -Cc---cHHHHHHHHHHHHHcCCcEEEECcchh-HHH
Confidence 22 235678899999999999999999755 444
No 136
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=89.90 E-value=0.32 Score=48.08 Aligned_cols=75 Identities=13% Similarity=0.106 Sum_probs=48.8
Q ss_pred HHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCC
Q 015523 237 VTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGR 316 (405)
Q Consensus 237 ~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k 316 (405)
..+...+++.|..++++..+. ..+++..-.+|.||+|||....... ..+.+ .++....++
T Consensus 13 ~~i~r~l~~~G~~~~i~p~~~----------------~~~~i~~~~~dgiIlsGGp~s~~~~-~~~~~---~~~~~~~~~ 72 (503)
T 2ywb_A 13 RLIARRLRELRAFSLILPGDA----------------PLEEVLKHRPQALILSGGPRSVFDP-DAPRP---DPRLFSSGL 72 (503)
T ss_dssp HHHHHHHHTTTCCEEEEETTC----------------CHHHHHTTCCSEEEECCCSSCSSCT-TCCCC---CGGGGCSSC
T ss_pred HHHHHHHHHCCCEEEEEECCC----------------CHHHHHhcCCCEEEECCCCchhccC-CCcch---HHHHHhCCC
Confidence 567788999998887774332 1122211246999999997433211 11111 234557899
Q ss_pred EEEEEchHHHHHHHc
Q 015523 317 IYGAVCSSPIVLHKH 331 (405)
Q Consensus 317 ~i~aic~g~~~La~a 331 (405)
||.+||-|..+|+.+
T Consensus 73 PvLGIC~G~Qlla~~ 87 (503)
T 2ywb_A 73 PLLGICYGMQLLAQE 87 (503)
T ss_dssp CEEEETHHHHHHHHT
T ss_pred CEEEECHHHHHHHHH
Confidence 999999999999985
No 137
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=89.82 E-value=0.15 Score=52.52 Aligned_cols=88 Identities=17% Similarity=0.120 Sum_probs=53.8
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhc
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQK 300 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~ 300 (405)
.+|+|+-+.+-... .+...+++.|..++++..+. ..+++...++|+||++||....... .
T Consensus 30 ~~I~VLDfg~q~~~---liar~lre~Gv~~~ivp~~~----------------~~e~i~~~~~dGIILsGGp~s~~~~-~ 89 (697)
T 2vxo_A 30 GAVVILDAGAQYGK---VIDRRVRELFVQSEIFPLET----------------PAFAIKEQGFRAIIISGGPNSVYAE-D 89 (697)
T ss_dssp CCEEEEEEC--CHH---HHHHHHHHTTCCEEEEETTC----------------CHHHHHHHTCSEEEEEECC--------
T ss_pred CEEEEEECCCchHH---HHHHHHHHCCCEEEEEECCC----------------CHHHHhhcCCCEEEECCCCCcccCc-c
Confidence 57888866543222 25578888998888775442 1222222468999999997432210 1
Q ss_pred ChHHHHHHHHHhhcCCEEEEEchHHHHHHHc
Q 015523 301 SRILKKLLKEQKVAGRIYGAVCSSPIVLHKH 331 (405)
Q Consensus 301 ~~~l~~~l~~~~~~~k~i~aic~g~~~La~a 331 (405)
.+.+ .+...+.++||.+||.|..+|+.+
T Consensus 90 ~~~~---~~~i~~~g~PvLGIC~G~QlLa~~ 117 (697)
T 2vxo_A 90 APWF---DPAIFTIGKPVLGICYGMQMMNKV 117 (697)
T ss_dssp CCCC---CGGGTTSSCCEEEEEHHHHHHHHH
T ss_pred chhH---HHHHHhCCCCEEEECHHHHHHHHH
Confidence 1111 133457899999999999999875
No 138
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=88.53 E-value=0.43 Score=43.46 Aligned_cols=100 Identities=10% Similarity=0.027 Sum_probs=58.3
Q ss_pred cEEEEEecCCCchhh-HHHHHHHHHhcCC-EEEEEecCCCceeEeccCcEEecCcc-cCCCCCCcccEEEEcCCch-hhh
Q 015523 18 LNVLVPVGFGTEEME-AVIIVDVLRRAGA-QVTMASVEPQLEVEASSGTRLVADTS-ISNCSHQVFDLIALPGGMP-GSV 93 (405)
Q Consensus 18 ~ki~ill~~g~~~~e-~~~~~~~l~~~~~-~v~~vs~~~~~~v~~~~g~~v~~~~~-~~~~~~~~~d~liipgg~~-~~~ 93 (405)
.||+|+-+-.....+ .....+.|++.|+ .++.+..... . . ..+.. .+.+ .+.|+|+|+||-. ...
T Consensus 57 ~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r-~-~-------a~~~~~~~~l--~~ad~I~v~GGnt~~l~ 125 (291)
T 3en0_A 57 AIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDR-A-Q-------GDDSGYRLFV--EQCTGIFMTGGDQLRLC 125 (291)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSG-G-G-------GGCHHHHHHH--HHCSEEEECCSCHHHHH
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCc-c-c-------cCCHHHHHHH--hcCCEEEECCCCHHHHH
Confidence 467777654333222 2344566666676 5655543221 0 0 00000 1112 2579999999931 122
Q ss_pred ccccChHHHHHHHHHHHcC-CEEEEEccchHHhhhhc
Q 015523 94 RLRDCEILKKITSKQAEEK-RLYGAICAAPAVTLLPW 129 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~-~~i~aic~g~~~~La~a 129 (405)
.......+.+.|++++++| .++++.|.| +.+++..
T Consensus 126 ~~l~~t~l~~~L~~~~~~G~~~~~GtSAG-A~i~~~~ 161 (291)
T 3en0_A 126 GLLADTPLMDRIRQRVHNGEISLAGTSAG-AAVMGHH 161 (291)
T ss_dssp HHHTTCHHHHHHHHHHHTTSSEEEEETHH-HHTTSSE
T ss_pred HHHHhCCHHHHHHHHHHCCCeEEEEeCHH-HHhhhHh
Confidence 2345678899999999999 899999995 5456543
No 139
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=87.25 E-value=0.5 Score=46.90 Aligned_cols=45 Identities=24% Similarity=0.262 Sum_probs=34.8
Q ss_pred cccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhh
Q 015523 79 VFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLP 128 (405)
Q Consensus 79 ~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ 128 (405)
.+|.|++|||.. ... .+...++++++.++++|+.+||-|-. +|+.
T Consensus 343 ~~DGIilsGGpg-~~~---~~g~~~~i~~a~~~~~PiLGIClG~Q-ll~v 387 (545)
T 1s1m_A 343 GLDAILVPGGFG-YRG---VEGMITTARFARENNIPYLGICLGMQ-VALI 387 (545)
T ss_dssp TCSEEEECCCCS-STT---HHHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred cCCEEEECCCCC-Ccc---chhhHHHHHHHHHCCCcEEEECChHH-HHHH
Confidence 699999999952 221 24677889989889999999999765 5663
No 140
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=86.47 E-value=0.51 Score=46.90 Aligned_cols=45 Identities=22% Similarity=0.186 Sum_probs=34.3
Q ss_pred cccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEEEEEccchHHhhhh
Q 015523 79 VFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLP 128 (405)
Q Consensus 79 ~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~ 128 (405)
.+|.|++|||+. ... .+..++.++.+.++++|+.+||-|-. +|+.
T Consensus 355 ~~DGIILpGGfG-d~~---~~g~i~~ir~a~e~~iPiLGICLGmQ-lL~~ 399 (550)
T 1vco_A 355 DVSGILVPGGFG-VRG---IEGKVRAAQYARERKIPYLGICLGLQ-IAVI 399 (550)
T ss_dssp TCSCEEECCCCS-STT---HHHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred cCCEEEECCCCC-Ccc---hhhhHHHHHHHHHCCCcEEEECcCHH-HHHH
Confidence 689999999952 221 24567888888889999999999765 4554
No 141
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=84.98 E-value=2 Score=38.28 Aligned_cols=84 Identities=18% Similarity=0.037 Sum_probs=56.3
Q ss_pred CcCEEEEEeCCCC-cHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 219 RMPRVLIPIANGS-EEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 219 ~~~~V~il~~~g~-~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
.|+||+|+ +|. .......+.+.|+..+|+|++++.+.- + .+.+++ .+||+||++.-. ...
T Consensus 3 ~m~~vLiV--~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~-~------------~~~~~L--~~yDvIIl~d~~--~~~ 63 (259)
T 3rht_A 3 AMTRVLYC--GDTSLETAAGYLAGLMTSWQWEFDYIPSHVG-L------------DVGELL--AKQDLVILSDYP--AER 63 (259)
T ss_dssp ---CEEEE--ESSCTTTTHHHHHHHHHHTTCCCEEECTTSC-B------------CSSHHH--HTCSEEEEESCC--GGG
T ss_pred CCceEEEE--CCCCchhHHHHHHHHHHhCCceEEEeccccc-c------------cChhHH--hcCCEEEEcCCc--ccc
Confidence 46788888 333 345566788899999999999877652 1 123444 789999998532 122
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEch
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCS 323 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~ 323 (405)
-++..++.|+++.++|.-++.+..
T Consensus 64 --l~~~~~~~L~~yV~~GGgLi~~gG 87 (259)
T 3rht_A 64 --MTAQAIDQLVTMVKAGCGLVMLGG 87 (259)
T ss_dssp --BCHHHHHHHHHHHHTTCEEEEECS
T ss_pred --CCHHHHHHHHHHHHhCCeEEEecC
Confidence 356777888888888888877754
No 142
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=84.22 E-value=0.26 Score=50.66 Aligned_cols=89 Identities=17% Similarity=0.076 Sum_probs=52.0
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLR 96 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~ 96 (405)
..||+||=+.+-... .+...+++.|..++++..+.. .+++...++|.||++||. +...-.
T Consensus 29 ~~~I~VLDfg~q~~~---liar~lre~Gv~~~ivp~~~~----------------~e~i~~~~~dGIILsGGp-~s~~~~ 88 (697)
T 2vxo_A 29 EGAVVILDAGAQYGK---VIDRRVRELFVQSEIFPLETP----------------AFAIKEQGFRAIIISGGP-NSVYAE 88 (697)
T ss_dssp CCCEEEEEEC--CHH---HHHHHHHHTTCCEEEEETTCC----------------HHHHHHHTCSEEEEEECC-------
T ss_pred CCEEEEEECCCchHH---HHHHHHHHCCCEEEEEECCCC----------------HHHHhhcCCCEEEECCCC-CcccCc
Confidence 457999866652222 256788888998888865431 111111258999999994 321111
Q ss_pred cChHHHHHHHHHHHcCCEEEEEccchHHhhhhc
Q 015523 97 DCEILKKITSKQAEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~a 129 (405)
+.+.+ .++.++.++||.+||.|-. +|+.+
T Consensus 89 ~~~~~---~~~i~~~g~PvLGIC~G~Q-lLa~~ 117 (697)
T 2vxo_A 89 DAPWF---DPAIFTIGKPVLGICYGMQ-MMNKV 117 (697)
T ss_dssp -CCCC---CGGGTTSSCCEEEEEHHHH-HHHHH
T ss_pred cchhH---HHHHHhCCCCEEEECHHHH-HHHHH
Confidence 11111 1234568899999999766 57753
No 143
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=82.42 E-value=0.83 Score=45.11 Aligned_cols=75 Identities=17% Similarity=0.055 Sum_probs=46.1
Q ss_pred HHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccccChHHHHHHHHHHHcCC
Q 015523 34 VIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKR 113 (405)
Q Consensus 34 ~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~ 113 (405)
..+.+.+++.|..++++..+.. + ..+.+. .+|.||+|||. ........+.+ .++.++.++
T Consensus 13 ~~i~r~l~~~G~~~~i~p~~~~-~------------~~i~~~---~~dgiIlsGGp-~s~~~~~~~~~---~~~~~~~~~ 72 (503)
T 2ywb_A 13 RLIARRLRELRAFSLILPGDAP-L------------EEVLKH---RPQALILSGGP-RSVFDPDAPRP---DPRLFSSGL 72 (503)
T ss_dssp HHHHHHHHTTTCCEEEEETTCC-H------------HHHHTT---CCSEEEECCCS-SCSSCTTCCCC---CGGGGCSSC
T ss_pred HHHHHHHHHCCCEEEEEECCCC-H------------HHHHhc---CCCEEEECCCC-chhccCCCcch---HHHHHhCCC
Confidence 5678889999988888754421 0 112222 47999999994 22111111111 234457899
Q ss_pred EEEEEccchHHhhhhc
Q 015523 114 LYGAICAAPAVTLLPW 129 (405)
Q Consensus 114 ~i~aic~g~~~~La~a 129 (405)
||.+||.|-. +|+.+
T Consensus 73 PvLGIC~G~Q-lla~~ 87 (503)
T 2ywb_A 73 PLLGICYGMQ-LLAQE 87 (503)
T ss_dssp CEEEETHHHH-HHHHT
T ss_pred CEEEECHHHH-HHHHH
Confidence 9999999755 56653
No 144
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=81.61 E-value=3.5 Score=36.69 Aligned_cols=85 Identities=9% Similarity=-0.162 Sum_probs=56.1
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
.|+||+|+- ......+...+.+.|+..+|+|+++.++.- +. +..++ .+||+||++.-. ...
T Consensus 3 ~m~~vLiV~-g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~-~~------------~~~~L--~~yDvIIl~d~~--~~~- 63 (259)
T 3rht_A 3 AMTRVLYCG-DTSLETAAGYLAGLMTSWQWEFDYIPSHVG-LD------------VGELL--AKQDLVILSDYP--AER- 63 (259)
T ss_dssp ---CEEEEE-SSCTTTTHHHHHHHHHHTTCCCEEECTTSC-BC------------SSHHH--HTCSEEEEESCC--GGG-
T ss_pred CCceEEEEC-CCCchhHHHHHHHHHHhCCceEEEeccccc-cc------------ChhHH--hcCCEEEEcCCc--ccc-
Confidence 467888883 333345667788899999999999987753 11 11233 379999998531 222
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
-++...+.|+++.++|.-++.+..
T Consensus 64 -l~~~~~~~L~~yV~~GGgLi~~gG 87 (259)
T 3rht_A 64 -MTAQAIDQLVTMVKAGCGLVMLGG 87 (259)
T ss_dssp -BCHHHHHHHHHHHHTTCEEEEECS
T ss_pred -CCHHHHHHHHHHHHhCCeEEEecC
Confidence 246777788888888888777755
No 145
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=76.89 E-value=3.2 Score=35.58 Aligned_cols=59 Identities=15% Similarity=0.222 Sum_probs=46.4
Q ss_pred CEEEEEe-------CCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcC
Q 015523 221 PRVLIPI-------ANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPG 290 (405)
Q Consensus 221 ~~V~il~-------~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpg 290 (405)
|+|+|+- |.....+|.....+++...|..|+++|...+ . -..+++++++.+||-++|..
T Consensus 1 mkiai~n~gnni~~fkt~p~setiyl~~~~~~mgl~vd~is~k~~-i----------y~~~fd~vd~n~ydr~~vvn 66 (351)
T 1jg7_A 1 MKIAIINMGNNVINFKTVPSSETIYLFKVISEMGLNVDIISLKNG-V----------YTKSFDEVDVNDYDRLIVVN 66 (351)
T ss_dssp CCEEEEESSSCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEESSCC-S----------SEEEGGGSCGGGCSEEEEEC
T ss_pred CceEEEecCCccccceecCccceeeHHHHHHHcCCCeeEEEeccc-e----------eeeecccCCccccceEEEEe
Confidence 3566664 3345788999999999999999999999886 2 22367888899999999874
No 146
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=76.38 E-value=24 Score=32.01 Aligned_cols=103 Identities=13% Similarity=0.037 Sum_probs=65.4
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceee---------cCCCcEEeeCCCccCcCCCCccEEE--Ec
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIV---------ASQGVKIIADKSISDAAESVYDLII--LP 289 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~---------~~~g~~v~~~~~l~~~~~~~~D~li--vp 289 (405)
++|.|++-+|-+-.+-..+...|...|++|.++.+....... ...|..+.+.. .++....+|+|| +
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~--~~l~~~~~dlIIDAL- 209 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQVSSL--KDLPTSPVDLVINCL- 209 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCSSCCHHHHHHHHHHHTSSCEEESCS--TTSCSSCCSEEEEEC-
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCCCCCHHHHHHHHHHHHcCCccccch--hhhccCCCCEEEECC-
Confidence 599999999999999999999999999999998665321110 11244443211 111112467665 4
Q ss_pred CCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHH
Q 015523 290 GGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIV 327 (405)
Q Consensus 290 gG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~ 327 (405)
| .+....+.+.+.+.++|+...+.+.+|.|+---+-+
T Consensus 210 G-~G~~~~l~~~~~~~~lI~~iN~~~~~VvAVDiPSGl 246 (306)
T 3d3j_A 210 D-CPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPVHE 246 (306)
T ss_dssp C-CTTCGGGGGCHHHHHHHHHHHHSCCCEEEESCCCC-
T ss_pred C-CCCCCccCcchHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 3 222223332367777777777788999998755444
No 147
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=75.04 E-value=5.4 Score=33.27 Aligned_cols=86 Identities=15% Similarity=0.078 Sum_probs=52.8
Q ss_pred CCcEEEEEecCCCc--hhhHHHHHHHHHh-cCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhh
Q 015523 16 FALNVLVPVGFGTE--EMEAVIIVDVLRR-AGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGS 92 (405)
Q Consensus 16 ~~~ki~ill~~g~~--~~e~~~~~~~l~~-~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~ 92 (405)
.|+||.|+.+.... ..=...+.+.+.. .+.+++++..... . ..++ .++|.+|+-.- .
T Consensus 3 ~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~-~--------------~~~l--~~aD~ii~gsP---~ 62 (188)
T 2ark_A 3 AMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEA-T--------------KEDV--LWADGLAVGSP---T 62 (188)
T ss_dssp CCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTC-C--------------HHHH--HHCSEEEEEEE---C
T ss_pred CCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhC-C--------------HHHH--HhCCEEEEEeC---c
Confidence 46789999876433 2223345566666 7888888876553 1 2223 25899888432 1
Q ss_pred hccccChHHHHHHHHHHH------cCCEEEEEccc
Q 015523 93 VRLRDCEILKKITSKQAE------EKRLYGAICAA 121 (405)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~------~~~~i~aic~g 121 (405)
....-.+.+..|+.+... ++|+++.++++
T Consensus 63 y~g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t~ 97 (188)
T 2ark_A 63 NMGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSSS 97 (188)
T ss_dssp BTTBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEEE
T ss_pred cCCcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEEC
Confidence 112234577888887654 68888887773
No 148
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=72.70 E-value=25 Score=31.03 Aligned_cols=103 Identities=13% Similarity=0.037 Sum_probs=64.2
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceee---------cCCCcEEeeCCCccCcCCCCccEEE--Ec
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIV---------ASQGVKIIADKSISDAAESVYDLII--LP 289 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~---------~~~g~~v~~~~~l~~~~~~~~D~li--vp 289 (405)
++|.|++-+|-+--|-..+...|...|++|+++.+...+... ...|..+.+.. .+.....+|++| +
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~--~~l~~~~~dlIVDAL- 162 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQVSSL--KDLPTSPVDLVINCL- 162 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCBCSSCCHHHHHHHHHHTTSSCEEESCG--GGSCSSCCSEEEEEC-
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEecCCCCCHHHHHHHHHHHHcCCCcccch--hhhccCCCCEEEECC-
Confidence 599999999999999999999999999999998665321110 11344443211 112112466665 4
Q ss_pred CCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHH
Q 015523 290 GGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIV 327 (405)
Q Consensus 290 gG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~ 327 (405)
| .+....+.+.+.+.++|+...+.+++|.|+.--+-+
T Consensus 163 G-~G~~~~l~~~~~~~~lI~~iN~~~~~vvAVDiPSGl 199 (259)
T 3d3k_A 163 D-CPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPVHE 199 (259)
T ss_dssp C-CTTCTTGGGSHHHHHHHHHHHHHCSCEEEESCCCC-
T ss_pred C-CCCCCccCcchHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 3 222222322356777777777778899998654444
No 149
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=72.24 E-value=4.1 Score=32.40 Aligned_cols=88 Identities=22% Similarity=0.311 Sum_probs=49.8
Q ss_pred cCEEEEEeCCCC--cHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCC-CccEEEEcCCccchH
Q 015523 220 MPRVLIPIANGS--EEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAES-VYDLIILPGGVAGAE 296 (405)
Q Consensus 220 ~~~V~il~~~g~--~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~-~~D~livpgG~~~~~ 296 (405)
|++|.|+-+... ...=.-.+.+.+...|++++++....- ..+++ . ++|.+++.....+..
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~~d~ii~g~pty~~~ 63 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA---------------SAENL--ADGYDAVLFGCSAWGME 63 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB---------------CCTTT--TTTCSEEEEEECEECSS
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC---------------CHhHh--cccCCEEEEEecccCCC
Confidence 468888876643 333333455677778888888866542 12333 4 789888765321110
Q ss_pred hhhcChHHHHHHHHHh---hcCCEEEEEchH
Q 015523 297 RLQKSRILKKLLKEQK---VAGRIYGAVCSS 324 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~---~~~k~i~aic~g 324 (405)
.-.-.+.+.+++++.. -+++.++.++.|
T Consensus 64 ~G~~p~~~~~fl~~l~~~~l~~k~~~vfg~G 94 (148)
T 3f6r_A 64 DLEMQDDFLSLFEEFDRIGLAGRKVAAFASG 94 (148)
T ss_dssp SCEECHHHHHHHTTGGGTCCTTCEEEEEEEE
T ss_pred CCCCcHHHHHHHHHhhccCCCCCEEEEEEeC
Confidence 0012345666666543 357888887765
No 150
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=68.19 E-value=9.9 Score=31.67 Aligned_cols=99 Identities=12% Similarity=0.070 Sum_probs=52.5
Q ss_pred cCEEEEEeCCC--CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecC---CCc--EEeeCCCccCcCCCCccEEEEcCCc
Q 015523 220 MPRVLIPIANG--SEEIEIVTIVDILRRAKVDVVVASVERSTQIVAS---QGV--KIIADKSISDAAESVYDLIILPGGV 292 (405)
Q Consensus 220 ~~~V~il~~~g--~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~---~g~--~v~~~~~l~~~~~~~~D~livpgG~ 292 (405)
|+||.|+.+.. ....=.-.+.+.+...+.+++++..... ...+. ... ...+....+++ .++|+|++..-.
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l--~~aD~ii~gsP~ 81 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAV-STECEAVAPDIPAEGALYATLEDL--KNCAGLALGSPT 81 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCCE-EC-------------CCBCCHHHH--HTCSEEEEEEEC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhhc-cchhhhhccccccccCchhhHHHH--HHCCEEEEEcCh
Confidence 56898888763 3333334456777778899998877652 11111 000 00111113333 678999885421
Q ss_pred cchHhhhcChHHHHHHHHHh-------hcCCEEEEEchH
Q 015523 293 AGAERLQKSRILKKLLKEQK-------VAGRIYGAVCSS 324 (405)
Q Consensus 293 ~~~~~~~~~~~l~~~l~~~~-------~~~k~i~aic~g 324 (405)
....-...+..||.+.. -++|+++.++++
T Consensus 82 ---y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~ 117 (200)
T 2a5l_A 82 ---RFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTST 117 (200)
T ss_dssp ---BTTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEB
T ss_pred ---hccCccHHHHHHHHHHHHHhhccccCCCEEEEEEec
Confidence 12223456666666543 267777766653
No 151
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=66.99 E-value=7 Score=31.72 Aligned_cols=89 Identities=16% Similarity=0.021 Sum_probs=50.0
Q ss_pred CEEEEEeCC--CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhh
Q 015523 221 PRVLIPIAN--GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERL 298 (405)
Q Consensus 221 ~~V~il~~~--g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~ 298 (405)
|+|.|+-+. |....=.-.+.+.|...|++++++....- . ++....++ .+||.|++.....+ ..+
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~-~----------~~~~~~~~--~~~d~ii~Gspty~-g~~ 66 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRAV-D----------PQELIEAV--SSARGIVLGTPPSQ-PSE 66 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTTC-C----------HHHHHHHH--HHCSEEEEECCBSS-CCH
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HhCCEEEEEcCCcC-Cch
Confidence 467777665 33433344567778888888888766542 0 11111222 46899988654322 112
Q ss_pred hcChHHHHHHHHHhhcCCEEEEEchH
Q 015523 299 QKSRILKKLLKEQKVAGRIYGAVCSS 324 (405)
Q Consensus 299 ~~~~~l~~~l~~~~~~~k~i~aic~g 324 (405)
+. ..+++.+....-++|+++.+|++
T Consensus 67 p~-~~fl~~l~~~~l~gk~v~~fgs~ 91 (161)
T 3hly_A 67 AV-ATALSTIFAAAHNKQAIGLFDSY 91 (161)
T ss_dssp HH-HHHHHHHHHHCCTTSEEEEECCC
T ss_pred hH-HHHHHHHHhhhhCCCEEEEEEcC
Confidence 22 34444444444578999999864
No 152
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=66.70 E-value=16 Score=36.94 Aligned_cols=91 Identities=19% Similarity=0.125 Sum_probs=64.3
Q ss_pred CcCEEEEEeCCCCc----------------HHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCC
Q 015523 219 RMPRVLIPIANGSE----------------EIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESV 282 (405)
Q Consensus 219 ~~~~V~il~~~g~~----------------~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~ 282 (405)
.+.+|+||-.-|-. .....++++.|..+++.++.++-+.= ..+ +. +.+
T Consensus 437 ~~~kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~FIsfdDI-----------~e~---e~--L~d 500 (759)
T 2zuv_A 437 GELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDV-----------LAH---GI--DSD 500 (759)
T ss_dssp CCSEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEEHHHH-----------HHH---CC--CTT
T ss_pred cCceEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEEecHHHh-----------ccc---cc--ccc
Confidence 45789999764321 12457799999999999999988751 000 22 378
Q ss_pred ccEEEEcC-Cc--cchHhhhcChHHHHHHHHHhhcCCEEEEEchHH
Q 015523 283 YDLIILPG-GV--AGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 325 (405)
Q Consensus 283 ~D~livpg-G~--~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~ 325 (405)
||+||-+| .. -.......++...+.||++..+|.-+++++.=+
T Consensus 501 ~DVIIn~G~A~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGepS 546 (759)
T 2zuv_A 501 IDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPS 546 (759)
T ss_dssp CCEEEEEECTTSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEESTT
T ss_pred CCEEEecCcchhcccCccccCCHHHHHHHHHHHHcCCcEEEeCCcc
Confidence 99999998 21 011223457999999999999999888887654
No 153
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=66.13 E-value=9.8 Score=31.60 Aligned_cols=84 Identities=17% Similarity=0.134 Sum_probs=53.0
Q ss_pred cCEEEEEeCCCCcHH--HHHHHHHHHHh-CCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 220 MPRVLIPIANGSEEI--EIVTIVDILRR-AKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 220 ~~~V~il~~~g~~~~--e~~~~~~~l~~-~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
|++|.|+.+....-. =.-.+.+.+.. .+.+++++..... . .+++ .++|.|++.... .
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~-~--------------~~~l--~~aD~ii~gsP~---y 63 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEA-T--------------KEDV--LWADGLAVGSPT---N 63 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTC-C--------------HHHH--HHCSEEEEEEEC---B
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhC-C--------------HHHH--HhCCEEEEEeCc---c
Confidence 578988887643322 23345666777 7888888876553 1 3344 578999885422 2
Q ss_pred hhhcChHHHHHHHHHhh------cCCEEEEEch
Q 015523 297 RLQKSRILKKLLKEQKV------AGRIYGAVCS 323 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~~------~~k~i~aic~ 323 (405)
...-.+.+.+||.+... ++|+++.+++
T Consensus 64 ~g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t 96 (188)
T 2ark_A 64 MGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSS 96 (188)
T ss_dssp TTBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEE
T ss_pred CCcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEE
Confidence 22345577888877654 6787777766
No 154
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=65.72 E-value=2.5 Score=34.17 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=62.8
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCC-----ceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccc
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERS-----TQIVASQGVKIIADKSISDAAESVYDLIILPGGVAG 294 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~-----~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~ 294 (405)
..+|.++=.+|++..=...+.-..+. .+..++ |+.. +...++.|..+.-... .+.|+|++-||.+-
T Consensus 26 ~~kIvf~Gs~GvCtPFaeL~~YaiR~--~~~~Fi-P~~d~e~a~~l~~~~~G~~~~~~~~------~~~D~vVllGGLAM 96 (157)
T 2r47_A 26 AERIGFAGVPGVCTPFAQLFAYAVRD--KDNIFI-PNTDFSKARKLEVTEYGVELGEISP------GNVDVLVLLGGLSM 96 (157)
T ss_dssp CSEEEEEECTTTTHHHHHHHHHHTTT--SEEEEE-ETTCGGGCEEEEEETTEEEEEEECC------CCEEEEEEEGGGGS
T ss_pred CCeEEEECCCeeecCHHhhheeeeeC--CceEEc-CCCChhHceEEEEecCceEeccccC------CCCCEEEEeccccC
Confidence 57999999999875433333333333 333333 3321 1233455766654322 36899999999843
Q ss_pred hHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcC
Q 015523 295 AERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHG 332 (405)
Q Consensus 295 ~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aG 332 (405)
+..-...+.+.+.|.+....++.|+++|-=. +..++|
T Consensus 97 Pk~~v~~e~v~~li~ki~~~~~kiiGvCFms-~F~kag 133 (157)
T 2r47_A 97 PGIGSDIEDVKKLVEDALEEGGELMGLCYMD-MFARAG 133 (157)
T ss_dssp TTTSCCHHHHHHHHHHHEEEEEEEEEEEETT-HHHHTT
T ss_pred CCCCCCHHHHHHHHHHhhcCCCCEEEEEhHH-HHHHcC
Confidence 3333456689999998877777799999643 334444
No 155
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=65.31 E-value=10 Score=32.10 Aligned_cols=99 Identities=11% Similarity=0.108 Sum_probs=53.0
Q ss_pred CcCEEEEEeCCC--CcHHHHHHHHHHHHhCCCeEEEEeecCCceee---cCCCcE-----Ee---eCCCccCcCCCCccE
Q 015523 219 RMPRVLIPIANG--SEEIEIVTIVDILRRAKVDVVVASVERSTQIV---ASQGVK-----II---ADKSISDAAESVYDL 285 (405)
Q Consensus 219 ~~~~V~il~~~g--~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~---~~~g~~-----v~---~~~~l~~~~~~~~D~ 285 (405)
.|+||.|+.+.. ....=.-.+.+.+...|.+++++..... .-. +..+.. .. +....+++ .++|+
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l--~~aD~ 81 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRET-APQDVIDGQDAWKANIEAMKDVPEATPADL--EWAEA 81 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCCC-SCHHHHTTCHHHHHHHHHTTTSCBCCHHHH--HHCSE
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecccc-ccchhhhcccccccccccccchhHHHHHHH--HHCCE
Confidence 568999998763 3333344566777778899998877652 100 000000 00 11223334 67899
Q ss_pred EEEcCCccchHhhhcChHHHHHHHHHh-------hcCCEEEEEch
Q 015523 286 IILPGGVAGAERLQKSRILKKLLKEQK-------VAGRIYGAVCS 323 (405)
Q Consensus 286 livpgG~~~~~~~~~~~~l~~~l~~~~-------~~~k~i~aic~ 323 (405)
||+..- .....-...+..||.+.. -++|+++.+++
T Consensus 82 ii~gsP---~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t 123 (211)
T 1ydg_A 82 IVFSSP---TRFGGATSQMRAFIDTLGGLWSSGKLANKTFSAMTS 123 (211)
T ss_dssp EEEEEE---EETTEECHHHHHHHHTTHHHHHTTTTTTCEEEEEEE
T ss_pred EEEEcC---ccccCccHHHHHHHHHhccccccccCCCCEEEEEEe
Confidence 988542 222233556667766542 24566555444
No 156
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=64.97 E-value=11 Score=31.43 Aligned_cols=101 Identities=11% Similarity=0.004 Sum_probs=52.6
Q ss_pred CcEEEEEecCCC--chhhHHHHHHHHHhcCCEEEEEecCCCceeEec---cCc--EEecCcccCCCCCCcccEEEEcCCc
Q 015523 17 ALNVLVPVGFGT--EEMEAVIIVDVLRRAGAQVTMASVEPQLEVEAS---SGT--RLVADTSISNCSHQVFDLIALPGGM 89 (405)
Q Consensus 17 ~~ki~ill~~g~--~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~---~g~--~v~~~~~~~~~~~~~~d~liipgg~ 89 (405)
|+||.|+.+... +..=...+.+.+...+.+++++..... ...+. ... ...|.....++ .++|.||+-.-
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l--~~aD~ii~gsP- 80 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAV-STECEAVAPDIPAEGALYATLEDL--KNCAGLALGSP- 80 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCCE-EC-------------CCBCCHHHH--HTCSEEEEEEE-
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhhc-cchhhhhccccccccCchhhHHHH--HHCCEEEEEcC-
Confidence 568999887642 233334455666777899998877552 11110 000 00011112222 26899988431
Q ss_pred hhhhccccChHHHHHHHHHHH-------cCCEEEEEccchH
Q 015523 90 PGSVRLRDCEILKKITSKQAE-------EKRLYGAICAAPA 123 (405)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~-------~~~~i~aic~g~~ 123 (405)
.....-...+..||.+... ++|+++.+++++.
T Consensus 81 --~y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~ 119 (200)
T 2a5l_A 81 --TRFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTAS 119 (200)
T ss_dssp --CBTTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBSC
T ss_pred --hhccCccHHHHHHHHHHHHHhhccccCCCEEEEEEecCC
Confidence 1112234566667666432 6788888877543
No 157
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=63.99 E-value=18 Score=32.84 Aligned_cols=93 Identities=14% Similarity=0.120 Sum_probs=48.9
Q ss_pred CcEEEEEecCCCc--hhhHHHHHHHHHhcCCEEEEEecCCCceeE---e------ccCcEEecCcccCCCCCCcccEEEE
Q 015523 17 ALNVLVPVGFGTE--EMEAVIIVDVLRRAGAQVTMASVEPQLEVE---A------SSGTRLVADTSISNCSHQVFDLIAL 85 (405)
Q Consensus 17 ~~ki~ill~~g~~--~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~---~------~~g~~v~~~~~~~~~~~~~~d~lii 85 (405)
|+||+|+.-++-. ...+..+.+.|++.++++.+...... ... . ..|..+.. ..-......++|++|+
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~d~vi~ 81 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAV-DRGSLHLAPDDMRAMGVEIEV-VDADQHAADGCELVLV 81 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CCCEEE
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh-hhhcccccccccccccccccc-cccccccccCCCEEEE
Confidence 5789999876543 23356777888899999887654432 210 0 00100100 0001112246899999
Q ss_pred cCCchhhhccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 86 PGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 86 pgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
.|| |..+++.++.....+.|+.+|-.
T Consensus 82 ~GG---------DGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 82 LGG---------DGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp EEC---------HHHHHHHHHHHHHHTCCEEEEEC
T ss_pred EeC---------CHHHHHHHHHhccCCCCEEEEeC
Confidence 999 24555666666666788888854
No 158
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=63.83 E-value=14 Score=33.68 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=50.5
Q ss_pred cCEEEEEeCCCCc--HHHHHHHHHHHHhCCCeEEEEeecCCceee---c-C-----CCcEEeeCCCccCcCCCCccEEEE
Q 015523 220 MPRVLIPIANGSE--EIEIVTIVDILRRAKVDVVVASVERSTQIV---A-S-----QGVKIIADKSISDAAESVYDLIIL 288 (405)
Q Consensus 220 ~~~V~il~~~g~~--~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~---~-~-----~g~~v~~~~~l~~~~~~~~D~liv 288 (405)
|+||+|+.-++-. ..-+..+.+.|.+.|+++.+...... ... . . .|..+.. ..-.+....++|++++
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~d~vi~ 81 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAV-DRGSLHLAPDDMRAMGVEIEV-VDADQHAADGCELVLV 81 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CCCEEE
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh-hhhcccccccccccccccccc-cccccccccCCCEEEE
Confidence 6789988866442 22356778888899998877654432 210 0 0 0100110 0001112357899999
Q ss_pred cCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHH
Q 015523 289 PGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 325 (405)
Q Consensus 289 pgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~ 325 (405)
.||- ..+++.++.+...+.++.+|-.|.
T Consensus 82 ~GGD---------GT~l~a~~~~~~~~~pvlgi~~G~ 109 (307)
T 1u0t_A 82 LGGD---------GTFLRAAELARNASIPVLGVNLGR 109 (307)
T ss_dssp EECH---------HHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EeCC---------HHHHHHHHHhccCCCCEEEEeCCC
Confidence 9983 467777777766778888886664
No 159
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=63.71 E-value=8.1 Score=34.71 Aligned_cols=72 Identities=18% Similarity=0.185 Sum_probs=47.8
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLR 96 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~ 96 (405)
.|||+|+.-++-. ...+.+.|++.++++.+...... .. .+.|++|+.|| .
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~~~~~~~------------------~~--~~~DlvIvlGG-D------ 78 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVELFNQPSE------------------EL--ENFDFIVSVGG-D------ 78 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEEESSCCG------------------GG--GGSSEEEEEEC-H------
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEEcccccc------------------cc--CCCCEEEEECC-C------
Confidence 4689998766544 66778889999998876543221 01 25799999999 2
Q ss_pred cChHHHHHHHHHHHcCCEEEEEccc
Q 015523 97 DCEILKKITSKQAEEKRLYGAICAA 121 (405)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~aic~g 121 (405)
..++...+.+... .||.++-.|
T Consensus 79 --GT~L~aa~~~~~~-~PilGIN~G 100 (278)
T 1z0s_A 79 --GTILRILQKLKRC-PPIFGINTG 100 (278)
T ss_dssp --HHHHHHHTTCSSC-CCEEEEECS
T ss_pred --HHHHHHHHHhCCC-CcEEEECCC
Confidence 3444555544444 899998764
No 160
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=61.84 E-value=13 Score=31.79 Aligned_cols=59 Identities=12% Similarity=0.182 Sum_probs=44.9
Q ss_pred cEEEEEecC----C---CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcC
Q 015523 18 LNVLVPVGF----G---TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPG 87 (405)
Q Consensus 18 ~ki~ill~~----g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipg 87 (405)
|||+|+-.- | ...+|...+.+++..-|.+|+++|...+ ... .+++++++.+||-++|..
T Consensus 1 mkiai~n~gnni~~fkt~p~setiyl~~~~~~mgl~vd~is~k~~-iy~----------~~fd~vd~n~ydr~~vvn 66 (351)
T 1jg7_A 1 MKIAIINMGNNVINFKTVPSSETIYLFKVISEMGLNVDIISLKNG-VYT----------KSFDEVDVNDYDRLIVVN 66 (351)
T ss_dssp CCEEEEESSSCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEESSCC-SSE----------EEGGGSCGGGCSEEEEEC
T ss_pred CceEEEecCCccccceecCccceeeHHHHHHHcCCCeeEEEeccc-eee----------eecccCCccccceEEEEe
Confidence 477777633 2 3368888999999999999999999886 222 346677888999999864
No 161
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=61.32 E-value=10 Score=34.98 Aligned_cols=95 Identities=13% Similarity=0.099 Sum_probs=55.2
Q ss_pred CCcEEEEEecCCCc----hhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchh
Q 015523 16 FALNVLVPVGFGTE----EMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPG 91 (405)
Q Consensus 16 ~~~ki~ill~~g~~----~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~ 91 (405)
+++|++|++.+..- ...+..+...|++.++++.+.......... .+ ..+.....+|.|++.|| .
T Consensus 23 ~m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~-----~~-----~~~~~~~~~d~vvv~GG-D- 90 (337)
T 2qv7_A 23 MRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDAT-----LE-----AERAMHENYDVLIAAGG-D- 90 (337)
T ss_dssp CCEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHH-----HH-----HHHHTTTTCSEEEEEEC-H-
T ss_pred ccceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHH-----HH-----HHHHhhcCCCEEEEEcC-c-
Confidence 35789999977442 233456778888899988887554421111 00 01111136899999999 2
Q ss_pred hhccccChHHHHHHHHH--HHcCCEEEEEccchHHhhhhc
Q 015523 92 SVRLRDCEILKKITSKQ--AEEKRLYGAICAAPAVTLLPW 129 (405)
Q Consensus 92 ~~~~~~~~~~~~~l~~~--~~~~~~i~aic~g~~~~La~a 129 (405)
..+.+.++.. .....+++.|-.|..=.||+.
T Consensus 91 -------GTv~~v~~~l~~~~~~~pl~iIP~GT~N~lAr~ 123 (337)
T 2qv7_A 91 -------GTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRA 123 (337)
T ss_dssp -------HHHHHHHHHHTTCSSCCEEEEEECSSCCHHHHH
T ss_pred -------hHHHHHHHHHHhCCCCCcEEEecCCcHhHHHHH
Confidence 3444555555 345678888854421135553
No 162
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=60.38 E-value=43 Score=26.18 Aligned_cols=88 Identities=15% Similarity=0.191 Sum_probs=49.6
Q ss_pred cCEEEEEeCC--CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 220 MPRVLIPIAN--GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 220 ~~~V~il~~~--g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
|++|.|+-+. |....=.-.+.+.+...+++++++.. ....++ .++|.+++.....+...
T Consensus 1 M~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~-----------------~~~~~l--~~~d~vi~g~pt~g~g~ 61 (147)
T 2hna_A 1 MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHG-----------------PLLEDL--PASGIWLVISSTHGAGD 61 (147)
T ss_dssp CCSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEECC-----------------TTSCSS--CSEEEEEEECCTTTTCC
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEecC-----------------CCHHHc--ccCCeEEEEECccCCCC
Confidence 4567776654 44444444566777777887776521 012334 67898888654321111
Q ss_pred h-hcChHHHHHHHHH--hhcCCEEEEEchHHH
Q 015523 298 L-QKSRILKKLLKEQ--KVAGRIYGAVCSSPI 326 (405)
Q Consensus 298 ~-~~~~~l~~~l~~~--~~~~k~i~aic~g~~ 326 (405)
+ ..-..+++++... .-+++.++.++.|-.
T Consensus 62 ~p~~~~~f~~~l~~~~~~l~~~~~avfg~G~~ 93 (147)
T 2hna_A 62 IPDNLSPFYEALQEQKPDLSAVRFGAIGIGSR 93 (147)
T ss_dssp TTSSCHHHHHHHHHHCCCTTEEEEEEESCCHH
T ss_pred CChhHHHHHHHHHhhccccCCCEEEEEecccC
Confidence 1 2334566666654 335677777776644
No 163
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=58.76 E-value=10 Score=30.64 Aligned_cols=91 Identities=14% Similarity=0.029 Sum_probs=48.6
Q ss_pred cEEEEEecCC--CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 18 LNVLVPVGFG--TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 18 ~ki~ill~~g--~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
|||.|+-+.. .+..=...+.+.+...|++++++..... . ++....++ .+||.+++-..... ...
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~-~----------~~~~~~~~--~~~d~ii~Gspty~-g~~ 66 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRAV-D----------PQELIEAV--SSARGIVLGTPPSQ-PSE 66 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTTC-C----------HHHHHHHH--HHCSEEEEECCBSS-CCH
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HhCCEEEEEcCCcC-Cch
Confidence 4777777653 3333444566777778888888866542 1 00111112 25898888543211 111
Q ss_pred ccChHHHHHHHHHHHcCCEEEEEccchH
Q 015523 96 RDCEILKKITSKQAEEKRLYGAICAAPA 123 (405)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~aic~g~~ 123 (405)
.. ..+++.+....-++++++.++++++
T Consensus 67 p~-~~fl~~l~~~~l~gk~v~~fgs~g~ 93 (161)
T 3hly_A 67 AV-ATALSTIFAAAHNKQAIGLFDSYGG 93 (161)
T ss_dssp HH-HHHHHHHHHHCCTTSEEEEECCCCS
T ss_pred hH-HHHHHHHHhhhhCCCEEEEEEcCCC
Confidence 11 2333333333347899999988654
No 164
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=58.05 E-value=12 Score=34.02 Aligned_cols=90 Identities=18% Similarity=0.131 Sum_probs=53.3
Q ss_pred cCCCCCcEEEEEecCCCc----hhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcC
Q 015523 12 ISPSFALNVLVPVGFGTE----EMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPG 87 (405)
Q Consensus 12 ~~~~~~~ki~ill~~g~~----~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipg 87 (405)
|.+.+++|+.|++.+..- ..-+..+...|++.++++++.......... .+. .+.. ..+|.|++.|
T Consensus 3 m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~-----~~~-----~~~~-~~~d~vv~~G 71 (304)
T 3s40_A 3 MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDAT-----KYC-----QEFA-SKVDLIIVFG 71 (304)
T ss_dssp --CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHH-----HHH-----HHHT-TTCSEEEEEE
T ss_pred CccCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHH-----HHH-----HHhh-cCCCEEEEEc
Confidence 556678899999988322 233456678888889988887544321111 111 1111 2689999999
Q ss_pred CchhhhccccChHHHHHHHHHHH--cCCEEEEEccc
Q 015523 88 GMPGSVRLRDCEILKKITSKQAE--EKRLYGAICAA 121 (405)
Q Consensus 88 g~~~~~~~~~~~~~~~~l~~~~~--~~~~i~aic~g 121 (405)
| . ..+.+.+..... ...+++.+-.|
T Consensus 72 G-D--------GTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 72 G-D--------GTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp C-H--------HHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred c-c--------hHHHHHHHHHhhCCCCCcEEEecCC
Confidence 9 2 344455555554 56778777443
No 165
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=57.17 E-value=22 Score=31.30 Aligned_cols=71 Identities=14% Similarity=0.206 Sum_probs=46.1
Q ss_pred HHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEE
Q 015523 239 IVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIY 318 (405)
Q Consensus 239 ~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i 318 (405)
+.+.|...+|+|++++.+.- ...+......+||+||+-|-. .... -+++..+.|+++.++|+-+
T Consensus 37 i~~~L~~~gf~V~~~t~dd~-------------~~~~~~~~L~~~DvvV~~~~~-~~~~--l~~~~~~al~~~V~~GgG~ 100 (252)
T 1t0b_A 37 IASYLAEAGFDAATAVLDEP-------------EHGLTDEVLDRCDVLVWWGHI-AHDE--VKDEVVERVHRRVLEGMGL 100 (252)
T ss_dssp HHHHHHHTTCEEEEEESSSG-------------GGGCCHHHHHTCSEEEEECSS-CGGG--SCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhhCCcEEEEEeccCc-------------cccCCHhHHhcCCEEEEecCC-CCCc--CCHHHHHHHHHHHHcCCCE
Confidence 47888889999999874321 111221123689999984311 1111 3567777888899999999
Q ss_pred EEEchHH
Q 015523 319 GAVCSSP 325 (405)
Q Consensus 319 ~aic~g~ 325 (405)
+++=.|.
T Consensus 101 vgiH~a~ 107 (252)
T 1t0b_A 101 IVLHSGH 107 (252)
T ss_dssp EEEGGGG
T ss_pred EEEcccC
Confidence 9997664
No 166
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=55.08 E-value=17 Score=30.58 Aligned_cols=102 Identities=11% Similarity=0.086 Sum_probs=53.4
Q ss_pred CCcEEEEEecCC--CchhhHHHHHHHHHhcCCEEEEEecCCCceeEec---cCcE-----Ee---cCcccCCCCCCcccE
Q 015523 16 FALNVLVPVGFG--TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEAS---SGTR-----LV---ADTSISNCSHQVFDL 82 (405)
Q Consensus 16 ~~~ki~ill~~g--~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~---~g~~-----v~---~~~~~~~~~~~~~d~ 82 (405)
.++||.|+.+.. .+..=...+.+.+.+.+.+++++..... .-.+. .+.. .. +.....++ .++|.
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l--~~aD~ 81 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRET-APQDVIDGQDAWKANIEAMKDVPEATPADL--EWAEA 81 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCCC-SCHHHHTTCHHHHHHHHHTTTSCBCCHHHH--HHCSE
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecccc-ccchhhhcccccccccccccchhHHHHHHH--HHCCE
Confidence 467999998764 3333344455666777899999876552 10000 0000 00 01112222 26899
Q ss_pred EEEcCCchhhhccccChHHHHHHHHHH-------HcCCEEEEEccchH
Q 015523 83 IALPGGMPGSVRLRDCEILKKITSKQA-------EEKRLYGAICAAPA 123 (405)
Q Consensus 83 liipgg~~~~~~~~~~~~~~~~l~~~~-------~~~~~i~aic~g~~ 123 (405)
||+-.- .....-...+..||.+.. -++|+++.+++++.
T Consensus 82 ii~gsP---~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~ 126 (211)
T 1ydg_A 82 IVFSSP---TRFGGATSQMRAFIDTLGGLWSSGKLANKTFSAMTSAQN 126 (211)
T ss_dssp EEEEEE---EETTEECHHHHHHHHTTHHHHHTTTTTTCEEEEEEEESS
T ss_pred EEEEcC---ccccCccHHHHHHHHHhccccccccCCCCEEEEEEeCCC
Confidence 888431 111223456667776542 25788777766543
No 167
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=54.83 E-value=1.2e+02 Score=27.05 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=56.5
Q ss_pred CcCEEEEEeCCCCcHHHH--HHHHHHHHhCC-CeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccch
Q 015523 219 RMPRVLIPIANGSEEIEI--VTIVDILRRAK-VDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGA 295 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~--~~~~~~l~~~~-~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~ 295 (405)
++.||+|+.-....+.+. ..+.+.|.+.+ |+|++...... . ... ..|.+ +..+||+||+--. ..
T Consensus 3 ~~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~-~-~d~--------~~f~~-~L~~~D~vV~~~~-~~- 69 (281)
T 4e5v_A 3 KPIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQ-G-KDM--------SGFVL-DFSPYQLVVLDYN-GD- 69 (281)
T ss_dssp CCEEEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCT-T-SCC--------TTCCC-CCTTCSEEEECCC-SS-
T ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCcc-c-cch--------hHHhh-hhhcCCEEEEeCC-CC-
Confidence 457888886654443332 45667777777 99998754321 0 000 12222 3478999995321 11
Q ss_pred HhhhcChHHHHHHHHHhhcCCEEEEEchHHH
Q 015523 296 ERLQKSRILKKLLKEQKVAGRIYGAVCSSPI 326 (405)
Q Consensus 296 ~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~ 326 (405)
.-++...+.|+++.++|+-++++.++..
T Consensus 70 ---~l~~~~~~~l~~yV~~Ggglv~~H~a~~ 97 (281)
T 4e5v_A 70 ---SWPEETNRRFLEYVQNGGGVVIYHAADN 97 (281)
T ss_dssp ---CCCHHHHHHHHHHHHTTCEEEEEGGGGG
T ss_pred ---cCCHHHHHHHHHHHHcCCCEEEEecccc
Confidence 1256777788888889999999988643
No 168
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=53.78 E-value=17 Score=32.60 Aligned_cols=72 Identities=17% Similarity=0.244 Sum_probs=49.6
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQ 299 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~ 299 (405)
.|||+|+.-++-. ...+.+.|.+.|+++.+...... .. .+.|++++.||-
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~~~~~~~------------------~~--~~~DlvIvlGGD------- 78 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVELFNQPSE------------------EL--ENFDFIVSVGGD------- 78 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEEESSCCG------------------GG--GGSSEEEEEECH-------
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEEcccccc------------------cc--CCCCEEEEECCC-------
Confidence 4678888766554 56678889999998876432211 11 357999999983
Q ss_pred cChHHHHHHHHHhhcCCEEEEEchH
Q 015523 300 KSRILKKLLKEQKVAGRIYGAVCSS 324 (405)
Q Consensus 300 ~~~~l~~~l~~~~~~~k~i~aic~g 324 (405)
..+++..+.+... .||.+|-.|
T Consensus 79 --GT~L~aa~~~~~~-~PilGIN~G 100 (278)
T 1z0s_A 79 --GTILRILQKLKRC-PPIFGINTG 100 (278)
T ss_dssp --HHHHHHHTTCSSC-CCEEEEECS
T ss_pred --HHHHHHHHHhCCC-CcEEEECCC
Confidence 3566666655555 899999887
No 169
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=53.51 E-value=54 Score=25.51 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=48.1
Q ss_pred CcEEEEEecCCC--chhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc
Q 015523 17 ALNVLVPVGFGT--EEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 17 ~~ki~ill~~g~--~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~ 94 (405)
|+||.|+.+... +..=...+.+.+...+++++++....- . ..++. .++|.+++.....+...
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~-~--------------~~~l~-~~~d~ii~g~pty~~~~ 64 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA-S--------------AENLA-DGYDAVLFGCSAWGMED 64 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB-C--------------CTTTT-TTCSEEEEEECEECSSS
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC-C--------------HhHhc-ccCCEEEEEecccCCCC
Confidence 358888876643 233333445666777889988876542 1 12222 05898888543111100
Q ss_pred cccChHHHHHHHHHH---HcCCEEEEEccc
Q 015523 95 LRDCEILKKITSKQA---EEKRLYGAICAA 121 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~---~~~~~i~aic~g 121 (405)
=.-.+.+.+|+.... -+++.++.++.|
T Consensus 65 G~~p~~~~~fl~~l~~~~l~~k~~~vfg~G 94 (148)
T 3f6r_A 65 LEMQDDFLSLFEEFDRIGLAGRKVAAFASG 94 (148)
T ss_dssp CEECHHHHHHHTTGGGTCCTTCEEEEEEEE
T ss_pred CCCcHHHHHHHHHhhccCCCCCEEEEEEeC
Confidence 011345666766543 257888877764
No 170
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=53.29 E-value=6.2 Score=31.84 Aligned_cols=105 Identities=17% Similarity=0.079 Sum_probs=65.1
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCC----CceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhh
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEP----QLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGS 92 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~----~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~ 92 (405)
..||.++=.+|+..-=+-...-..|. -+..++.... .+-...+.|+++.-... .+.|+|++-||...+
T Consensus 26 ~~kIvf~Gs~GvCtPFaeL~~YaiR~--~~~~FiP~~d~e~a~~l~~~~~G~~~~~~~~------~~~D~vVllGGLAMP 97 (157)
T 2r47_A 26 AERIGFAGVPGVCTPFAQLFAYAVRD--KDNIFIPNTDFSKARKLEVTEYGVELGEISP------GNVDVLVLLGGLSMP 97 (157)
T ss_dssp CSEEEEEECTTTTHHHHHHHHHHTTT--SEEEEEETTCGGGCEEEEEETTEEEEEEECC------CCEEEEEEEGGGGST
T ss_pred CCeEEEECCCeeecCHHhhheeeeeC--CceEEcCCCChhHceEEEEecCceEeccccC------CCCCEEEEeccccCC
Confidence 56899999999874322222222333 4666665422 11233456766653322 268999999996433
Q ss_pred hccccChHHHHHHHHHHHcCCEEEEEccchHHhhhhcCC
Q 015523 93 VRLRDCEILKKITSKQAEEKRLYGAICAAPAVTLLPWGL 131 (405)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~~~~~i~aic~g~~~~La~agl 131 (405)
..-...+++.+.+.+..+.++-|.++|-= . +..++|-
T Consensus 98 k~~v~~e~v~~li~ki~~~~~kiiGvCFm-s-~F~kagW 134 (157)
T 2r47_A 98 GIGSDIEDVKKLVEDALEEGGELMGLCYM-D-MFARAGW 134 (157)
T ss_dssp TTSCCHHHHHHHHHHHEEEEEEEEEEEET-T-HHHHTTH
T ss_pred CCCCCHHHHHHHHHHhhcCCCCEEEEEhH-H-HHHHcCC
Confidence 33344567888888887777789999994 4 4677773
No 171
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=53.14 E-value=32 Score=28.36 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=52.5
Q ss_pred cCEEEEEeCCC--CcHHHHHHHHHHHHh-CCCeEEEEeecCCceee---cCCCcE--EeeCCCccCcCCCCccEEEEcCC
Q 015523 220 MPRVLIPIANG--SEEIEIVTIVDILRR-AKVDVVVASVERSTQIV---ASQGVK--IIADKSISDAAESVYDLIILPGG 291 (405)
Q Consensus 220 ~~~V~il~~~g--~~~~e~~~~~~~l~~-~~~~v~~vs~~~~~~v~---~~~g~~--v~~~~~l~~~~~~~~D~livpgG 291 (405)
|+||.|+.+.. ....=.-.+.+.+.. .|.+++++..... ... +..+.. ..+....+++ .++|+|++..-
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l--~~aD~ii~gsP 77 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPET-MPPQLFEKAGGKTQTAPVATPQEL--ADYDAIIFGTP 77 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCCC-SCHHHHHHTTCCCCCSCBCCGGGG--GGCSEEEEEEE
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEcccc-CchhhhhhcccccccCchhhHHHH--HHCCEEEEEeC
Confidence 46888888763 333333456677777 7899998887652 100 001110 0011113444 67999988542
Q ss_pred ccchHhhhcChHHHHHHHHHh-------hcCCEEEEEchH
Q 015523 292 VAGAERLQKSRILKKLLKEQK-------VAGRIYGAVCSS 324 (405)
Q Consensus 292 ~~~~~~~~~~~~l~~~l~~~~-------~~~k~i~aic~g 324 (405)
.....-...+..||.+.. -++|+++.++++
T Consensus 78 ---~y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~ 114 (198)
T 3b6i_A 78 ---TRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSST 114 (198)
T ss_dssp ---EETTEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEE
T ss_pred ---hhcCCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeC
Confidence 122223445666665432 367777766654
No 172
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=52.58 E-value=37 Score=26.08 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=43.2
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcC
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPG 87 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipg 87 (405)
+++++|+|+=...-...--..+...|.+.||++.-+.|+.+ .+ .|.+..+ ++.+++ . .|.++|--
T Consensus 2 ~~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~-~i---~G~~~y~--sl~dlp-~-vDlavi~~ 66 (122)
T 3ff4_A 2 NAMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKG-EV---LGKTIIN--ERPVIE-G-VDTVTLYI 66 (122)
T ss_dssp CCCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCS-EE---TTEECBC--SCCCCT-T-CCEEEECS
T ss_pred CCCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCC-cC---CCeeccC--ChHHCC-C-CCEEEEEe
Confidence 35778999865443333345566777778999999998876 55 4554443 566776 3 78877743
No 173
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=51.85 E-value=20 Score=28.13 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=45.4
Q ss_pred CEEEEEeCCCC--cHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCC-ccEEEEcCCccchHh
Q 015523 221 PRVLIPIANGS--EEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESV-YDLIILPGGVAGAER 297 (405)
Q Consensus 221 ~~V~il~~~g~--~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~-~D~livpgG~~~~~~ 297 (405)
|||.|+.+... ...=.-.+.+.+...+++++++....- ..+++ .+ +|.+++.....+...
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~~d~ii~~~p~y~~g~ 63 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASV---------------EAGGL--FEGFDLVLLGCSTWGDDS 63 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGGGC---------------CSTTT--TTTCSEEEEEECEECSSS
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEehhhC---------------CHHHh--cCcCCEEEEEeCCCCCCC
Confidence 46777665433 222223445666667888888765532 12233 56 898888643211101
Q ss_pred hhcChHHHHHHHHH---hhcCCEEEEEchH
Q 015523 298 LQKSRILKKLLKEQ---KVAGRIYGAVCSS 324 (405)
Q Consensus 298 ~~~~~~l~~~l~~~---~~~~k~i~aic~g 324 (405)
..-...+.+++.+. .-++|.++.+|+|
T Consensus 64 ~~~p~~~~~fl~~l~~~~l~~k~~~v~~~g 93 (147)
T 1f4p_A 64 IELQDDFIPLFDSLEETGAQGRKVACFGCG 93 (147)
T ss_dssp CEECTTTHHHHHTGGGSCCTTCEEEEEEEE
T ss_pred cCCChhHHHHHHHHHhcccCCCEEEEEeec
Confidence 00122445555543 2357788877775
No 174
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=51.35 E-value=28 Score=32.76 Aligned_cols=90 Identities=11% Similarity=0.044 Sum_probs=54.7
Q ss_pred CcCEEEEEeCCCCcHHH--HHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 219 RMPRVLIPIANGSEEIE--IVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e--~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
.+++|.|+.+....-.+ .-.+.+.+...+++++++..... .+ ....+++ .++|++++.... .
T Consensus 255 ~~~kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~-~~----------~~~~~~l--~~~D~iiigsP~---y 318 (414)
T 2q9u_A 255 CQKKVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSS-DI----------TKVALHT--YDSGAVAFASPT---L 318 (414)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGC-CH----------HHHHHHH--HTCSEEEEECCC---B
T ss_pred cCCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcC-CH----------HHHHHHH--HhCCEEEEEcCc---c
Confidence 46899998877543332 33466677778888888876542 11 0111234 578999987532 2
Q ss_pred hhhcChHHHHHHHHHh---h-cCCEEEEEchH
Q 015523 297 RLQKSRILKKLLKEQK---V-AGRIYGAVCSS 324 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~---~-~~k~i~aic~g 324 (405)
.....+.+..++.+.. . ++|+++.+|++
T Consensus 319 ~~~~~~~~k~fld~l~~~~~~~~K~~~~~~t~ 350 (414)
T 2q9u_A 319 NNTMMPSVAAALNYVRGLTLIKGKPAFAFGAF 350 (414)
T ss_dssp TTBCCHHHHHHHHHHHHHTTTTTSBEEEEEEE
T ss_pred CcCchHHHHHHHHHHHhhcccCCCEEEEEEec
Confidence 2223445666666544 3 78999888876
No 175
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=51.23 E-value=13 Score=32.92 Aligned_cols=76 Identities=17% Similarity=0.191 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhh------cC----hHH
Q 015523 235 EIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQ------KS----RIL 304 (405)
Q Consensus 235 e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~------~~----~~l 304 (405)
+...+.+.|...+++++++..... + . . - +...+++ .+||+||+.+.. ...+. .+ +..
T Consensus 41 ~~~~l~~aL~~~~~~v~~~~~~~~-~-~-----~-f-p~~~~~L--~~yDvIIl~~~~--~~~l~~~~~~~~~~~~~~~~ 107 (256)
T 2gk3_A 41 GATWLLECLRKGGVDIDYMPAHTV-Q-I-----A-F-PESIDEL--NRYDVIVISDIG--SNTFLLQNETFYQLKIKPNA 107 (256)
T ss_dssp SCHHHHHHHHHTTCEEEEECHHHH-H-H-----C-C-CCSHHHH--HTCSEEEEESCC--HHHHHSCHHHHTTCCCCCCH
T ss_pred cHHHHHHHHHhcCceEEEEecccc-h-h-----h-C-CcChhHH--hcCCEEEEeCCc--hhhcccccccccccccChHH
Confidence 345577788888999998855411 0 0 0 0 0112334 789999998742 22221 11 566
Q ss_pred HHHHHHHhhcCCEEEEEch
Q 015523 305 KKLLKEQKVAGRIYGAVCS 323 (405)
Q Consensus 305 ~~~l~~~~~~~k~i~aic~ 323 (405)
++.|+++.++|.-+..+..
T Consensus 108 ~~~l~~~V~~GGgll~igG 126 (256)
T 2gk3_A 108 LESIKEYVKNGGGLLMIGG 126 (256)
T ss_dssp HHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHhCCEEEEECC
Confidence 7888999888988888854
No 176
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=51.21 E-value=1.3e+02 Score=26.66 Aligned_cols=90 Identities=14% Similarity=0.085 Sum_probs=53.2
Q ss_pred CCcEEEEEecCCC--chhhHHHHHHHHHhcC-CEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhh
Q 015523 16 FALNVLVPVGFGT--EEMEAVIIVDVLRRAG-AQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGS 92 (405)
Q Consensus 16 ~~~ki~ill~~g~--~~~e~~~~~~~l~~~~-~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~ 92 (405)
++.||+|+.-.+. .......+.+.|++.+ |+|++...... + .... .+.. ...+||+||+-.. .
T Consensus 3 ~~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~-~-~d~~--------~f~~-~L~~~D~vV~~~~---~ 68 (281)
T 4e5v_A 3 KPIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQ-G-KDMS--------GFVL-DFSPYQLVVLDYN---G 68 (281)
T ss_dssp CCEEEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCT-T-SCCT--------TCCC-CCTTCSEEEECCC---S
T ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCcc-c-cchh--------HHhh-hhhcCCEEEEeCC---C
Confidence 4567887754321 1222345566666777 99999865321 0 0001 1111 2247999996332 1
Q ss_pred hccccChHHHHHHHHHHHcCCEEEEEccc
Q 015523 93 VRLRDCEILKKITSKQAEEKRLYGAICAA 121 (405)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~~~~~i~aic~g 121 (405)
.. -++..++-|+++.++|+.++++.+|
T Consensus 69 ~~--l~~~~~~~l~~yV~~Ggglv~~H~a 95 (281)
T 4e5v_A 69 DS--WPEETNRRFLEYVQNGGGVVIYHAA 95 (281)
T ss_dssp SC--CCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred Cc--CCHHHHHHHHHHHHcCCCEEEEecc
Confidence 11 2466777888899999999999884
No 177
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=49.41 E-value=32 Score=30.48 Aligned_cols=66 Identities=6% Similarity=0.022 Sum_probs=39.8
Q ss_pred cEEEEEecCCCchhh-HHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccc
Q 015523 18 LNVLVPVGFGTEEME-AVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLR 96 (405)
Q Consensus 18 ~ki~ill~~g~~~~e-~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~ 96 (405)
||++|+.-+.-...+ ...+.+.|++.+++++ ..++|++|+.||
T Consensus 1 mki~ii~n~~~~~~~~~~~l~~~l~~~g~~v~----------------------------~~~~D~vv~lGG-------- 44 (272)
T 2i2c_A 1 MKYMITSKGDEKSDLLRLNMIAGFGEYDMEYD----------------------------DVEPEIVISIGG-------- 44 (272)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTSSCEEC----------------------------SSSCSEEEEEES--------
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEeC----------------------------CCCCCEEEEEcC--------
Confidence 578888775322222 2334555666677651 125799999998
Q ss_pred cChHHHHHHHHHHHc--CCEEEEEcc
Q 015523 97 DCEILKKITSKQAEE--KRLYGAICA 120 (405)
Q Consensus 97 ~~~~~~~~l~~~~~~--~~~i~aic~ 120 (405)
|..+++..+..... +.||.+|-.
T Consensus 45 -DGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 45 -DGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp -HHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred -cHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 23455555655554 788888844
No 178
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=49.14 E-value=29 Score=32.62 Aligned_cols=92 Identities=10% Similarity=-0.021 Sum_probs=52.5
Q ss_pred CCcEEEEEecCCCch--hhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh
Q 015523 16 FALNVLVPVGFGTEE--MEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV 93 (405)
Q Consensus 16 ~~~ki~ill~~g~~~--~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~ 93 (405)
+++||.|+.+...-- .=...+.+.+...+++++++..... .+ .....++ .++|.+++-.-. .
T Consensus 255 ~~~kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~-~~----------~~~~~~l--~~~D~iiigsP~---y 318 (414)
T 2q9u_A 255 CQKKVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSS-DI----------TKVALHT--YDSGAVAFASPT---L 318 (414)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGC-CH----------HHHHHHH--HTCSEEEEECCC---B
T ss_pred cCCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcC-CH----------HHHHHHH--HhCCEEEEEcCc---c
Confidence 357888887664332 2233455666667888888865442 11 0111123 268999996531 1
Q ss_pred ccccChHHHHHHHHHHH----cCCEEEEEccchH
Q 015523 94 RLRDCEILKKITSKQAE----EKRLYGAICAAPA 123 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~~----~~~~i~aic~g~~ 123 (405)
.....+.+..|+.+... ++|+++.+++++.
T Consensus 319 ~~~~~~~~k~fld~l~~~~~~~~K~~~~~~t~g~ 352 (414)
T 2q9u_A 319 NNTMMPSVAAALNYVRGLTLIKGKPAFAFGAFGW 352 (414)
T ss_dssp TTBCCHHHHHHHHHHHHHTTTTTSBEEEEEEESS
T ss_pred CcCchHHHHHHHHHHHhhcccCCCEEEEEEecCC
Confidence 12234456666666443 7899998887653
No 179
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=48.00 E-value=55 Score=33.09 Aligned_cols=88 Identities=15% Similarity=0.081 Sum_probs=62.0
Q ss_pred CcEEEEEecCCCch----------------hhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcc
Q 015523 17 ALNVLVPVGFGTEE----------------MEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVF 80 (405)
Q Consensus 17 ~~ki~ill~~g~~~----------------~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~ 80 (405)
+.|||||-.-|-.. ....++++.|...+++|++++-+.- .. + ... .+|
T Consensus 438 ~~kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~FIsfdDI---~e--------~---e~L--~d~ 501 (759)
T 2zuv_A 438 ELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDV---LA--------H---GID--SDI 501 (759)
T ss_dssp CSEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEEHHHH---HH--------H---CCC--TTC
T ss_pred CceEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEEecHHHh---cc--------c---ccc--ccC
Confidence 47899987543211 2447799999999999999997652 10 0 112 479
Q ss_pred cEEEEcCCch---hhhccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 81 DLIALPGGMP---GSVRLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 81 d~liipgg~~---~~~~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
|+||-+|--. .......++...+.||++..+|.-+++++.
T Consensus 502 DVIIn~G~A~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGe 544 (759)
T 2zuv_A 502 DVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGE 544 (759)
T ss_dssp CEEEEEECTTSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEecCcchhcccCccccCCHHHHHHHHHHHHcCCcEEEeCC
Confidence 9999998211 112233468899999999999999999987
No 180
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=47.76 E-value=13 Score=33.32 Aligned_cols=89 Identities=12% Similarity=-0.022 Sum_probs=50.8
Q ss_pred CcEEEEEecCCCc--hhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc
Q 015523 17 ALNVLVPVGFGTE--EMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 17 ~~ki~ill~~g~~--~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~ 94 (405)
++||+|+.-++-. ...+..+.+.|++.++++.+...... ... ..+..... .... ..++|.+|+.||
T Consensus 5 mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~-~~~-~~~~~~~~---~~~~-~~~~D~vi~~GG------ 72 (292)
T 2an1_A 5 FKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAH-ELQ-LKNVPTGT---LAEI-GQQADLAVVVGG------ 72 (292)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHH-HTT-CSSCCEEC---HHHH-HHHCSEEEECSC------
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh-hcc-cccccccc---hhhc-ccCCCEEEEEcC------
Confidence 5789999876522 23356677888899998877543211 100 00111000 0111 135899999999
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
|..+++.++.....+.|+.++-.
T Consensus 73 ---DGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 73 ---DGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp ---HHHHHHHHHHHTTSSCEEEEBCS
T ss_pred ---cHHHHHHHHHhhcCCCCEEEEEC
Confidence 34566667766667789888843
No 181
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=46.00 E-value=39 Score=27.07 Aligned_cols=91 Identities=7% Similarity=-0.055 Sum_probs=53.3
Q ss_pred cCEEEEEeCCC--CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 220 MPRVLIPIANG--SEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 220 ~~~V~il~~~g--~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
.++|.|+-+.. ....=.-.+.+.|...|.+++++....- + .++..+.++ .++|.|++....... .
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~-~---------~~~~~~~~~--~~~d~ii~Gspty~g-~ 70 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAA-V---------DLQELRELV--GRCTGLVIGMSPAAS-A 70 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSC-C---------CHHHHHHHH--HTEEEEEEECCBTTS-H
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCc-C---------CHHHHHHHH--HhCCEEEEEcCcCCC-C
Confidence 35788877653 3333344567788888988888766531 0 011112233 569999987643221 1
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchH
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSS 324 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g 324 (405)
++ ...+++.+.....++|+++.++++
T Consensus 71 ~p-~~~~l~~l~~~~~~~k~va~fgs~ 96 (159)
T 3fni_A 71 AS-IQGALSTILGSVNEKQAVGIFETG 96 (159)
T ss_dssp HH-HHHHHHHHHHHCCTTSEEEEECCS
T ss_pred cc-HHHHHHHHHhhcccCCEEEEEEcC
Confidence 22 244555555444588999999865
No 182
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=45.49 E-value=28 Score=31.90 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=55.8
Q ss_pred cCEEEEEeCCCC----cHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccch
Q 015523 220 MPRVLIPIANGS----EEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGA 295 (405)
Q Consensus 220 ~~~V~il~~~g~----~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~ 295 (405)
|+|++|++-+.. .......+...|.+.++++.+...+...... . ...+.....+|.|++.||-
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~-----~-----~~~~~~~~~~d~vvv~GGD--- 90 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDAT-----L-----EAERAMHENYDVLIAAGGD--- 90 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHH-----H-----HHHHHTTTTCSEEEEEECH---
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHH-----H-----HHHHHhhcCCCEEEEEcCc---
Confidence 467888876533 1233456788889999988877554420110 0 0111122467888888883
Q ss_pred HhhhcChHHHHHHHHH--hhcCCEEEEEchHHH-HHHHc
Q 015523 296 ERLQKSRILKKLLKEQ--KVAGRIYGAVCSSPI-VLHKH 331 (405)
Q Consensus 296 ~~~~~~~~l~~~l~~~--~~~~k~i~aic~g~~-~La~a 331 (405)
..+.+.++.. .....+++.|=.|+. .||+.
T Consensus 91 ------GTv~~v~~~l~~~~~~~pl~iIP~GT~N~lAr~ 123 (337)
T 2qv7_A 91 ------GTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRA 123 (337)
T ss_dssp ------HHHHHHHHHHTTCSSCCEEEEEECSSCCHHHHH
T ss_pred ------hHHHHHHHHHHhCCCCCcEEEecCCcHhHHHHH
Confidence 3566666666 455677787777776 55554
No 183
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=45.10 E-value=34 Score=27.45 Aligned_cols=93 Identities=10% Similarity=-0.034 Sum_probs=51.0
Q ss_pred CcEEEEEecCC--CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc
Q 015523 17 ALNVLVPVGFG--TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 17 ~~ki~ill~~g--~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~ 94 (405)
.+||.|+-+.. -+..=...+.+.+...|.+++++..... + .++....++ .+||.||+-.......
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~-~---------~~~~~~~~~--~~~d~ii~Gspty~g~- 70 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAA-V---------DLQELRELV--GRCTGLVIGMSPAASA- 70 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSC-C---------CHHHHHHHH--HTEEEEEEECCBTTSH-
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCc-C---------CHHHHHHHH--HhCCEEEEEcCcCCCC-
Confidence 35788887663 3334444566778888888888866531 0 001111122 2589988854321111
Q ss_pred cccChHHHHHHHHHHHcCCEEEEEccchH
Q 015523 95 LRDCEILKKITSKQAEEKRLYGAICAAPA 123 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~aic~g~~ 123 (405)
+. ...++..+....-.+++++.++++++
T Consensus 71 ~p-~~~~l~~l~~~~~~~k~va~fgs~g~ 98 (159)
T 3fni_A 71 AS-IQGALSTILGSVNEKQAVGIFETGGG 98 (159)
T ss_dssp HH-HHHHHHHHHHHCCTTSEEEEECCSSS
T ss_pred cc-HHHHHHHHHhhcccCCEEEEEEcCCC
Confidence 21 13344444433347899999988653
No 184
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=44.12 E-value=68 Score=32.61 Aligned_cols=62 Identities=16% Similarity=0.096 Sum_probs=48.2
Q ss_pred hHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccccChHHHHHHHHHHHc
Q 015523 32 EAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLRDCEILKKITSKQAEE 111 (405)
Q Consensus 32 e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~ 111 (405)
++......|.+.++.++++.++. +++ .|++||+|.-+ .-++.+.+.|+++.++
T Consensus 426 ~~~~~y~aL~~~gi~vD~v~~~~-------------------dL~--~Yklvv~P~~~------~~~~~~~~~L~~yV~~ 478 (675)
T 3tty_A 426 EVHKYYDALYKQNIQTDMISVEE-------------------DLS--KYKVVIAPVMY------MVKPGFAERVERFVAQ 478 (675)
T ss_dssp HHHHHHHHHHTTTCCEEEECTTS-------------------CCT--TCSEEEETTCC------BCCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCceEEEecCcC-------------------Ccc--cCCEEEEeccE------ecCHHHHHHHHHHHhc
Confidence 46778888899999999998763 232 69999999873 2356788889999999
Q ss_pred CCEEEEEcc
Q 015523 112 KRLYGAICA 120 (405)
Q Consensus 112 ~~~i~aic~ 120 (405)
|..+.+.+-
T Consensus 479 GG~lv~t~~ 487 (675)
T 3tty_A 479 GGTFVTTFF 487 (675)
T ss_dssp TCEEEEETT
T ss_pred CCEEEEEcc
Confidence 887776654
No 185
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=44.07 E-value=56 Score=33.24 Aligned_cols=62 Identities=19% Similarity=0.211 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhh
Q 015523 234 IEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKV 313 (405)
Q Consensus 234 ~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~ 313 (405)
.++...+..|.+.|+.+++++++. ++ +.|++||+|.-. .-++.+.+.|+++.+
T Consensus 425 ~~~~~~y~aL~~~gi~vD~v~~~~-------------------dL--~~Yklvv~P~~~------~~~~~~~~~L~~yV~ 477 (675)
T 3tty_A 425 NEVHKYYDALYKQNIQTDMISVEE-------------------DL--SKYKVVIAPVMY------MVKPGFAERVERFVA 477 (675)
T ss_dssp HHHHHHHHHHHTTTCCEEEECTTS-------------------CC--TTCSEEEETTCC------BCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCceEEEecCcC-------------------Cc--ccCCEEEEeccE------ecCHHHHHHHHHHHh
Confidence 457789999999999999997652 22 679999999864 235678888888887
Q ss_pred cCCEEEEEc
Q 015523 314 AGRIYGAVC 322 (405)
Q Consensus 314 ~~k~i~aic 322 (405)
+|..+++.+
T Consensus 478 ~GG~lv~t~ 486 (675)
T 3tty_A 478 QGGTFVTTF 486 (675)
T ss_dssp TTCEEEEET
T ss_pred cCCEEEEEc
Confidence 776555443
No 186
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=43.52 E-value=44 Score=27.47 Aligned_cols=101 Identities=13% Similarity=0.055 Sum_probs=52.6
Q ss_pred CcEEEEEecCC--CchhhHHHHHHHHHh-cCCEEEEEecCCCceeE---eccCcE--EecCcccCCCCCCcccEEEEcCC
Q 015523 17 ALNVLVPVGFG--TEEMEAVIIVDVLRR-AGAQVTMASVEPQLEVE---ASSGTR--LVADTSISNCSHQVFDLIALPGG 88 (405)
Q Consensus 17 ~~ki~ill~~g--~~~~e~~~~~~~l~~-~~~~v~~vs~~~~~~v~---~~~g~~--v~~~~~~~~~~~~~~d~liipgg 88 (405)
|+||.|+.+.. .+..=...+.+.+.. .+.+++++..... ... +..+.. ..+.....++ .++|.||+-.-
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l--~~aD~ii~gsP 77 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPET-MPPQLFEKAGGKTQTAPVATPQEL--ADYDAIIFGTP 77 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCCC-SCHHHHHHTTCCCCCSCBCCGGGG--GGCSEEEEEEE
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEcccc-CchhhhhhcccccccCchhhHHHH--HHCCEEEEEeC
Confidence 35888888763 233333455666776 7899999887652 100 011110 0011112333 36899988431
Q ss_pred chhhhccccChHHHHHHHHHH-------HcCCEEEEEccchH
Q 015523 89 MPGSVRLRDCEILKKITSKQA-------EEKRLYGAICAAPA 123 (405)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~-------~~~~~i~aic~g~~ 123 (405)
.....-...+..||.+.. -++|+++.+++++.
T Consensus 78 ---~y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~ 116 (198)
T 3b6i_A 78 ---TRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGT 116 (198)
T ss_dssp ---EETTEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEESS
T ss_pred ---hhcCCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeCCC
Confidence 111122445666665532 36788888877543
No 187
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=41.41 E-value=1.2e+02 Score=23.40 Aligned_cols=85 Identities=14% Similarity=0.135 Sum_probs=44.7
Q ss_pred cEEEEEecC--CCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 18 LNVLVPVGF--GTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 18 ~ki~ill~~--g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
+|+.|+-+. |-+..=...+.+.+...+++++++.. ....++. +||.+++.....+....
T Consensus 2 ~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~-----------------~~~~~l~--~~d~vi~g~pt~g~g~~ 62 (147)
T 2hna_A 2 ADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHG-----------------PLLEDLP--ASGIWLVISSTHGAGDI 62 (147)
T ss_dssp CSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEECC-----------------TTSCSSC--SEEEEEEECCTTTTCCT
T ss_pred CeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEecC-----------------CCHHHcc--cCCeEEEEECccCCCCC
Confidence 477777654 33444444556667777787776521 0122333 68988885432111111
Q ss_pred -ccChHHHHHHHHH--HHcCCEEEEEccc
Q 015523 96 -RDCEILKKITSKQ--AEEKRLYGAICAA 121 (405)
Q Consensus 96 -~~~~~~~~~l~~~--~~~~~~i~aic~g 121 (405)
..-..+.++|... .-+++.++.++.|
T Consensus 63 p~~~~~f~~~l~~~~~~l~~~~~avfg~G 91 (147)
T 2hna_A 63 PDNLSPFYEALQEQKPDLSAVRFGAIGIG 91 (147)
T ss_dssp TSSCHHHHHHHHHHCCCTTEEEEEEESCC
T ss_pred ChhHHHHHHHHHhhccccCCCEEEEEecc
Confidence 1234555666543 2345677777764
No 188
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=40.85 E-value=22 Score=31.83 Aligned_cols=91 Identities=10% Similarity=0.000 Sum_probs=53.3
Q ss_pred cCEEEEEeCCCC--cHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 220 MPRVLIPIANGS--EEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 220 ~~~V~il~~~g~--~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
|+||+|+.-++- ....+..+.+.|.+.|+++.+...... .. ...+..... .+.. ..++|.+++.||
T Consensus 5 mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~-~~-~~~~~~~~~---~~~~-~~~~D~vi~~GG------ 72 (292)
T 2an1_A 5 FKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAH-EL-QLKNVPTGT---LAEI-GQQADLAVVVGG------ 72 (292)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHH-HT-TCSSCCEEC---HHHH-HHHCSEEEECSC------
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh-hc-ccccccccc---hhhc-ccCCCEEEEEcC------
Confidence 578988876542 222355677888999998876543221 10 000111100 1111 145899999998
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEchHH
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVCSSP 325 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic~g~ 325 (405)
|..+++.++.+...+.++.+|-.|.
T Consensus 73 ---DGT~l~a~~~~~~~~~P~lGI~~Gt 97 (292)
T 2an1_A 73 ---DGNMLGAARTLARYDINVIGINRGN 97 (292)
T ss_dssp ---HHHHHHHHHHHTTSSCEEEEBCSSS
T ss_pred ---cHHHHHHHHHhhcCCCCEEEEECCC
Confidence 3477788887777788988886554
No 189
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=40.62 E-value=24 Score=31.24 Aligned_cols=45 Identities=16% Similarity=0.151 Sum_probs=33.9
Q ss_pred cccccCCcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCC
Q 015523 213 VEWFFDRMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERS 258 (405)
Q Consensus 213 ~~~~~~~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~ 258 (405)
|++..+++|||.|--=||....-+..+++.|.. ..+|.+++|..+
T Consensus 4 ~~~~~~~~m~ILlTNDDGi~apGi~aL~~~l~~-~~~V~VVAP~~~ 48 (261)
T 3ty2_A 4 MKKTATPKLRLLLSNDDGVYAKGLAILAKTLAD-LGEVDVVAPDRN 48 (261)
T ss_dssp -------CCEEEEECSSCTTCHHHHHHHHHHTT-TSEEEEEEESSC
T ss_pred hhhccCCCCeEEEEcCCCCCCHHHHHHHHHHHh-cCCEEEEecCCC
Confidence 344445568888888889999999999999988 679999999976
No 190
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=40.09 E-value=23 Score=31.55 Aligned_cols=86 Identities=15% Similarity=0.103 Sum_probs=51.0
Q ss_pred cCEEEEEeCC---CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 220 MPRVLIPIAN---GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 220 ~~~V~il~~~---g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
.++|++++.+ .|...-+.++.+.+.+.|+++.+...... +-.. ...++.+....+|++|+.+...
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~i~~l~~~~vdgiIi~~~~~--- 69 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN-EETQ--------MSQIENMINRGVDVLVIIPYNG--- 69 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTC-HHHH--------HHHHHHHHHTTCSEEEEECSST---
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCC-HHHH--------HHHHHHHHHcCCCEEEEeCCCh---
Confidence 4689999875 46666677788888899999998876543 1000 0112222225689888876421
Q ss_pred hhhcChHHHHHHHHHhhcCCEEEEEc
Q 015523 297 RLQKSRILKKLLKEQKVAGRIYGAVC 322 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~~~~k~i~aic 322 (405)
..+.+.++++.+.+.+++.+.
T Consensus 70 -----~~~~~~~~~~~~~~iPvV~~~ 90 (313)
T 3m9w_A 70 -----QVLSNVVKEAKQEGIKVLAYD 90 (313)
T ss_dssp -----TSCHHHHHHHHTTTCEEEEES
T ss_pred -----hhhHHHHHHHHHCCCeEEEEC
Confidence 112234455556676776654
No 191
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=39.78 E-value=45 Score=31.11 Aligned_cols=97 Identities=13% Similarity=-0.038 Sum_probs=58.8
Q ss_pred CCCcEEEEEecCCC--chhhHHHHHHHHHhcCCEEEEEecCCCc-eeEeccCc------EEecCcccCCCCCCcccEEEE
Q 015523 15 SFALNVLVPVGFGT--EEMEAVIIVDVLRRAGAQVTMASVEPQL-EVEASSGT------RLVADTSISNCSHQVFDLIAL 85 (405)
Q Consensus 15 ~~~~ki~ill~~g~--~~~e~~~~~~~l~~~~~~v~~vs~~~~~-~v~~~~g~------~v~~~~~~~~~~~~~~d~lii 85 (405)
.++++|+|+.=.+- ....+..+.++|.+.+++|.+=...... .+.....+ .......+++.. .++|++|+
T Consensus 36 ~~~k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~DlvI~ 114 (365)
T 3pfn_A 36 KSPKSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDIS-NQIDFIIC 114 (365)
T ss_dssp SCCCEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEEEHHHHHSHHHHHCSTTHHHHHHCEEECTTTCCCT-TTCSEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEEehHHhhhhccccccccccccccccccccChhhcc-cCCCEEEE
Confidence 35789999985543 3455677888898889888664322110 00000011 011112334443 47999999
Q ss_pred cCCchhhhccccChHHHHHHHHHHHcCCEEEEEccc
Q 015523 86 PGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAA 121 (405)
Q Consensus 86 pgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g 121 (405)
.|| |..++...+.+.....||.++-.|
T Consensus 115 lGG---------DGT~L~aa~~~~~~~~PvlGiN~G 141 (365)
T 3pfn_A 115 LGG---------DGTLLYASSLFQGSVPPVMAFHLG 141 (365)
T ss_dssp ESS---------TTHHHHHHHHCSSSCCCEEEEESS
T ss_pred EcC---------hHHHHHHHHHhccCCCCEEEEcCC
Confidence 999 356666677666678899999874
No 192
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=39.09 E-value=1.1e+02 Score=23.12 Aligned_cols=67 Identities=18% Similarity=0.220 Sum_probs=41.2
Q ss_pred HHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcChH--HHHHHHHHhh-
Q 015523 237 VTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSRI--LKKLLKEQKV- 313 (405)
Q Consensus 237 ~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~~--l~~~l~~~~~- 313 (405)
-.+.+.+...+++++++..... ..+++ .++|.+++..... .-...+. +.+++.+...
T Consensus 18 ~~i~~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~d~vi~g~p~y---~~~~~~~~~~~~fl~~l~~~ 77 (137)
T 2fz5_A 18 NEIEAAVKAAGADVESVRFEDT---------------NVDDV--ASKDVILLGCPAM---GSEELEDSVVEPFFTDLAPK 77 (137)
T ss_dssp HHHHHHHHHTTCCEEEEETTSC---------------CHHHH--HTCSEEEEECCCB---TTTBCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHhCCCeEEEEEcccC---------------CHHHH--hcCCEEEEEcccc---CCCCCCHHHHHHHHHHhhhh
Confidence 3455667777888888765542 12333 5789998865321 1123344 7777776533
Q ss_pred -cCCEEEEEch
Q 015523 314 -AGRIYGAVCS 323 (405)
Q Consensus 314 -~~k~i~aic~ 323 (405)
++|+++.+++
T Consensus 78 l~~k~~~~~~t 88 (137)
T 2fz5_A 78 LKGKKVGLFGS 88 (137)
T ss_dssp CSSCEEEEEEE
T ss_pred cCCCEEEEEEe
Confidence 6888887775
No 193
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=38.91 E-value=71 Score=27.91 Aligned_cols=70 Identities=13% Similarity=0.104 Sum_probs=44.2
Q ss_pred HHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEE
Q 015523 36 IVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLY 115 (405)
Q Consensus 36 ~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i 115 (405)
+.+.|+..+|+|++++.+.. . ..++.-...+||+||+-|.. .... -+++..+-|+++.++|+-+
T Consensus 37 i~~~L~~~gf~V~~~t~dd~-~------------~~~~~~~L~~~DvvV~~~~~-~~~~--l~~~~~~al~~~V~~GgG~ 100 (252)
T 1t0b_A 37 IASYLAEAGFDAATAVLDEP-E------------HGLTDEVLDRCDVLVWWGHI-AHDE--VKDEVVERVHRRVLEGMGL 100 (252)
T ss_dssp HHHHHHHTTCEEEEEESSSG-G------------GGCCHHHHHTCSEEEEECSS-CGGG--SCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhhCCcEEEEEeccCc-c------------ccCCHhHHhcCCEEEEecCC-CCCc--CCHHHHHHHHHHHHcCCCE
Confidence 46778888999999873331 0 00111111369999984321 1111 3566777888999999999
Q ss_pred EEEccc
Q 015523 116 GAICAA 121 (405)
Q Consensus 116 ~aic~g 121 (405)
+++-.|
T Consensus 101 vgiH~a 106 (252)
T 1t0b_A 101 IVLHSG 106 (252)
T ss_dssp EEEGGG
T ss_pred EEEccc
Confidence 999664
No 194
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=37.99 E-value=54 Score=25.14 Aligned_cols=75 Identities=17% Similarity=0.151 Sum_probs=44.9
Q ss_pred CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhcCh--HHHHH
Q 015523 230 GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQKSR--ILKKL 307 (405)
Q Consensus 230 g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~~~--~l~~~ 307 (405)
|....=.-.+.+.|...|++++++....- . .+++ .++|.+++...... -...+ .+.++
T Consensus 10 GnT~~iA~~ia~~l~~~g~~v~~~~~~~~-~--------------~~~l--~~~d~iiig~pty~---~g~~p~~~~~~f 69 (138)
T 5nul_A 10 GNTEKMAELIAKGIIESGKDVNTINVSDV-N--------------IDEL--LNEDILILGCSAMT---DEVLEESEFEPF 69 (138)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCEEEEGGGC-C--------------HHHH--TTCSEEEEEECCBT---TTBCCTTTHHHH
T ss_pred chHHHHHHHHHHHHHHCCCeEEEEEhhhC-C--------------HHHH--hhCCEEEEEcCccC---CCCCChHHHHHH
Confidence 33333334556778888888888876543 1 1234 67898888643211 11122 56777
Q ss_pred HHHHh--hcCCEEEEEchH
Q 015523 308 LKEQK--VAGRIYGAVCSS 324 (405)
Q Consensus 308 l~~~~--~~~k~i~aic~g 324 (405)
+++.. -++|+++.++++
T Consensus 70 l~~l~~~l~~k~~~~f~t~ 88 (138)
T 5nul_A 70 IEEISTKISGKKVALFGSY 88 (138)
T ss_dssp HHHHGGGCTTCEEEEEEEE
T ss_pred HHHHHhhcCCCEEEEEEec
Confidence 77665 378888888863
No 195
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=37.70 E-value=68 Score=28.29 Aligned_cols=36 Identities=8% Similarity=0.130 Sum_probs=26.3
Q ss_pred CCccEEEEcCCccchHhhhcChHHHHHHHHHhhc--CCEEEEEchHH
Q 015523 281 SVYDLIILPGGVAGAERLQKSRILKKLLKEQKVA--GRIYGAVCSSP 325 (405)
Q Consensus 281 ~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~--~k~i~aic~g~ 325 (405)
.++|++++.|| |..+++..+.+... +.||.+|-.|.
T Consensus 34 ~~~D~vv~lGG---------DGT~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 34 VEPEIVISIGG---------DGTFLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SSCSEEEEEES---------HHHHHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCCEEEEEcC---------cHHHHHHHHHHhhcCCCCCEEEEeCCC
Confidence 46899999998 34667777766654 78888886654
No 196
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=36.88 E-value=19 Score=31.61 Aligned_cols=89 Identities=19% Similarity=0.112 Sum_probs=49.0
Q ss_pred cCCcCEEEEEeCCCC---cHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCcc
Q 015523 217 FDRMPRVLIPIANGS---EEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVA 293 (405)
Q Consensus 217 ~~~~~~V~il~~~g~---~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~ 293 (405)
.++..+|++++.+-. ...-+.++.+.+.+.|+++.+...... .-.. ...++.+....+|++|+.+..
T Consensus 5 ~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~~~~l~~~~vdgiI~~~~~- 74 (293)
T 3l6u_A 5 SPKRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNS-RISE--------REQILEFVHLKVDAIFITTLD- 74 (293)
T ss_dssp ----CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSC-HHHH--------HHHHHHHHHTTCSEEEEECSC-
T ss_pred CCCCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCC-HHHH--------HHHHHHHHHcCCCEEEEecCC-
Confidence 346789999997633 333455667777888999998866543 1000 011222222568999986542
Q ss_pred chHhhhcChHHHHHHHHHhhcCCEEEEEc
Q 015523 294 GAERLQKSRILKKLLKEQKVAGRIYGAVC 322 (405)
Q Consensus 294 ~~~~~~~~~~l~~~l~~~~~~~k~i~aic 322 (405)
.....+.++++.+.+.+++.+.
T Consensus 75 -------~~~~~~~~~~~~~~~iPvV~~~ 96 (293)
T 3l6u_A 75 -------DVYIGSAIEEAKKAGIPVFAID 96 (293)
T ss_dssp -------TTTTHHHHHHHHHTTCCEEEES
T ss_pred -------hHHHHHHHHHHHHcCCCEEEec
Confidence 1112234455556677777664
No 197
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=36.37 E-value=11 Score=31.67 Aligned_cols=99 Identities=10% Similarity=0.014 Sum_probs=51.8
Q ss_pred cCEEEEEeCC----CCcHHHHHHHHHH-HHhCCCeEEEEeecCCceee---cCCCcEEeeCCCccCcCCCCccEEEEcCC
Q 015523 220 MPRVLIPIAN----GSEEIEIVTIVDI-LRRAKVDVVVASVERSTQIV---ASQGVKIIADKSISDAAESVYDLIILPGG 291 (405)
Q Consensus 220 ~~~V~il~~~----g~~~~e~~~~~~~-l~~~~~~v~~vs~~~~~~v~---~~~g~~v~~~~~l~~~~~~~~D~livpgG 291 (405)
|++|.++... |....=.-.+.+. +...|.+++++....- ++. ......-......+++ .++|++++..-
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~~~-~~~~~~~~~~~~~~~~~~~~~i--~~aD~ii~~sP 78 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHVIDL-DPKALLRGDLSNAKLKEAVDAT--CNADGLIVATP 78 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEGGGS-CHHHHHHTCTTSHHHHHHHHHH--HHCSEEEEEEE
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEcccc-CchhhcccccCcHHHHHHHHHH--HHCCEEEEEeC
Confidence 5788888765 3343333445566 7777888988887643 321 0000000000001223 56899888542
Q ss_pred ccchHhhhcChHHHHHHHHHh---hcCCEEEEEchH
Q 015523 292 VAGAERLQKSRILKKLLKEQK---VAGRIYGAVCSS 324 (405)
Q Consensus 292 ~~~~~~~~~~~~l~~~l~~~~---~~~k~i~aic~g 324 (405)
.....-...+.+||.+.. -++|+++.+++|
T Consensus 79 ---~y~~~~p~~lK~~ld~l~~~~~~gK~~~~~~tg 111 (197)
T 2vzf_A 79 ---IYKASYTGLLKAFLDILPQFALAGKAALPLATG 111 (197)
T ss_dssp ---CBTTBCCHHHHHHHTTSCTTTTTTCEEEEEEEE
T ss_pred ---ccCCCCCHHHHHHHHhccccccCCCEEEEEEEC
Confidence 112223455666665432 357888877764
No 198
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=36.13 E-value=34 Score=31.91 Aligned_cols=91 Identities=15% Similarity=-0.016 Sum_probs=52.9
Q ss_pred CcCEEEEEeCCCCc--HHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 219 RMPRVLIPIANGSE--EIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 219 ~~~~V~il~~~g~~--~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
..+++.++.+.... ..=.-.+.+.+...+++++++....- . .....+++ .++|.+++.....
T Consensus 255 ~~~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~~~~~~-~----------~~~~~~~l--~~~d~iiigsP~y--- 318 (404)
T 2ohh_A 255 VDERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHED-D----------RSEIVKDI--LESGAIALGAPTI--- 318 (404)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEEETTTS-C----------HHHHHHHH--HTCSEEEEECCEE---
T ss_pred CCCcEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HHCCEEEEECccc---
Confidence 45788888776443 33333456777777888888876542 1 01112234 5789999875321
Q ss_pred hhhcChHHHHHHHHHh---h---cCCEEEEEchHH
Q 015523 297 RLQKSRILKKLLKEQK---V---AGRIYGAVCSSP 325 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~---~---~~k~i~aic~g~ 325 (405)
.....+.+.+++.+.. . ++|+++.+|++.
T Consensus 319 ~~~~~~~~k~~ld~l~~~~~~~l~~k~~~~~~~~g 353 (404)
T 2ohh_A 319 YDEPYPSVGDLLMYLRGLKFNRTLTRKALVFGSMG 353 (404)
T ss_dssp TTEECTHHHHHHHHHHHHCGGGTCCEEEEEEEEES
T ss_pred cccchHHHHHHHHHhhhccccccCCCEEEEEEecC
Confidence 1122334555555443 3 788888887653
No 199
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=35.92 E-value=44 Score=30.20 Aligned_cols=96 Identities=16% Similarity=0.072 Sum_probs=52.9
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCc-------eeec-C-CCcEEeeC---CCccCcCCCCccEEE
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERST-------QIVA-S-QGVKIIAD---KSISDAAESVYDLII 287 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~-------~v~~-~-~g~~v~~~---~~l~~~~~~~~D~li 287 (405)
++||+|+ |.-..-. .+...|.++|.+|.++..+... .+.+ . ...++.+- ...++. ..++|+||
T Consensus 2 ~mkI~Ii---GaGaiG~-~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~-~~~~DlVi 76 (320)
T 3i83_A 2 SLNILVI---GTGAIGS-FYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAEL-ETKPDCTL 76 (320)
T ss_dssp -CEEEEE---SCCHHHH-HHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGC-SSCCSEEE
T ss_pred CCEEEEE---CcCHHHH-HHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHc-CCCCCEEE
Confidence 4688888 4444443 2445566788999888765310 1121 1 12222111 122332 13789998
Q ss_pred EcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHH
Q 015523 288 LPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPI 326 (405)
Q Consensus 288 vpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~ 326 (405)
+.--.. ..+.+++.|+.....+.+|+++++|.-
T Consensus 77 lavK~~------~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 77 LCIKVV------EGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp ECCCCC------TTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred EecCCC------ChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 854211 223456666666677889999999864
No 200
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=34.88 E-value=32 Score=30.99 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=52.0
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEee------------CCCccCcCCCCccEEE
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIA------------DKSISDAAESVYDLII 287 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~------------~~~l~~~~~~~~D~li 287 (405)
++||+|+ --|..-.- +...|.++|.+|.++..+.- ......|+.+.. ....++. .++|+||
T Consensus 2 ~mkI~Ii-GaGaiG~~---~a~~L~~~g~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~--~~~D~vi 74 (312)
T 3hn2_A 2 SLRIAIV-GAGALGLY---YGALLQRSGEDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEEI--GPMDLVL 74 (312)
T ss_dssp --CEEEE-CCSTTHHH---HHHHHHHTSCCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHHH--CCCSEEE
T ss_pred CCEEEEE-CcCHHHHH---HHHHHHHCCCeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHHc--CCCCEEE
Confidence 3678777 33333332 34556677888888776531 111122333221 1122223 5789998
Q ss_pred EcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHH
Q 015523 288 LPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPI 326 (405)
Q Consensus 288 vpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~ 326 (405)
+.--. ...+.+++.|+.....+..|+++++|.-
T Consensus 75 lavk~------~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 75 VGLKT------FANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp ECCCG------GGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred EecCC------CCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 85421 1234567777777778889999999874
No 201
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=34.51 E-value=1e+02 Score=27.63 Aligned_cols=60 Identities=13% Similarity=0.014 Sum_probs=37.7
Q ss_pred HHHHHhcccccccCccccccccccccccCCcCEEEEEeCC---CCcHHHHHHHHHHHHhCCCeEEEEeecC
Q 015523 190 KEIGELLLMHNADNSLKKEEFNEVEWFFDRMPRVLIPIAN---GSEEIEIVTIVDILRRAKVDVVVASVER 257 (405)
Q Consensus 190 ~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~---g~~~~e~~~~~~~l~~~~~~v~~vs~~~ 257 (405)
.++++.|.|.+.+... ..+..+..+|++++.+ .|...-+.++.+.+.+.||.+.+...+.
T Consensus 46 ~~~~~~lgY~pn~~a~--------~l~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 108 (344)
T 3kjx_A 46 LAAAKELGYVPNKIAG--------ALASNRVNLVAVIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDY 108 (344)
T ss_dssp HHHHHHHTCCCCCCCS--------CSTTSCCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTT
T ss_pred HHHHHHhCCCCCHHHH--------HhhcCCCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3456667665544311 1123456799999875 3445555677778888899998776554
No 202
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=34.21 E-value=28 Score=31.88 Aligned_cols=96 Identities=13% Similarity=0.154 Sum_probs=56.2
Q ss_pred cCEEEEEeCCCCcH-HHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhh
Q 015523 220 MPRVLIPIANGSEE-IEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERL 298 (405)
Q Consensus 220 ~~~V~il~~~g~~~-~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~ 298 (405)
|+|++|++-+.... ..+..+...|.+.++++.+...+...... .+ ..+.....+|.|++.||-
T Consensus 29 ~~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~~~~~~-----~~-----~~~~~~~~~d~vvv~GGD------ 92 (332)
T 2bon_A 29 FPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAA-----RY-----VEEARKFGVATVIAGGGD------ 92 (332)
T ss_dssp -CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHHH-----HH-----HHHHHHHTCSEEEEEESH------
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecCcchHH-----HH-----HHHHHhcCCCEEEEEccc------
Confidence 57888887653211 33456778888899988877554220110 00 011111358999999983
Q ss_pred hcChHHHHHHHHHh----hcCCEEEEEchHHH--HHHHcCCC
Q 015523 299 QKSRILKKLLKEQK----VAGRIYGAVCSSPI--VLHKHGLL 334 (405)
Q Consensus 299 ~~~~~l~~~l~~~~----~~~k~i~aic~g~~--~La~aGlL 334 (405)
..+.+.++... ....+++.+=.|+. +....|+-
T Consensus 93 ---GTl~~v~~~l~~~~~~~~~plgiiP~Gt~N~fa~~l~i~ 131 (332)
T 2bon_A 93 ---GTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIP 131 (332)
T ss_dssp ---HHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCC
T ss_pred ---hHHHHHHHHHhhcccCCCCeEEEecCcCHHHHHHhcCCC
Confidence 46667777666 55678887755554 44456653
No 203
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=34.06 E-value=29 Score=31.05 Aligned_cols=88 Identities=14% Similarity=0.012 Sum_probs=52.9
Q ss_pred CcCEEEEEeCC---CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccch
Q 015523 219 RMPRVLIPIAN---GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGA 295 (405)
Q Consensus 219 ~~~~V~il~~~---g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~ 295 (405)
+.++|++++.+ .|...-+.++.+.+.+.||++.+...+.. +-.. ...++.+....+|++|+.+..
T Consensus 2 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~i~~~~~~~vdgiIi~~~~--- 69 (330)
T 3uug_A 2 DKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDD-IPNQ--------LSQIENMVTKGVKVLVIASID--- 69 (330)
T ss_dssp CCCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHHH--------HHHHHHHHHHTCSEEEECCSS---
T ss_pred CCcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCC-HHHH--------HHHHHHHHHcCCCEEEEEcCC---
Confidence 45799999976 34455566677888888999998875543 1000 011222222468999987642
Q ss_pred HhhhcChHHHHHHHHHhhcCCEEEEEch
Q 015523 296 ERLQKSRILKKLLKEQKVAGRIYGAVCS 323 (405)
Q Consensus 296 ~~~~~~~~l~~~l~~~~~~~k~i~aic~ 323 (405)
.......+++..+.|.+++.+..
T Consensus 70 -----~~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 70 -----GTTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp -----GGGGHHHHHHHHHTTCEEEEESS
T ss_pred -----chhHHHHHHHHHHCCCCEEEECC
Confidence 11223345556667888877754
No 204
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=33.83 E-value=1.5e+02 Score=28.84 Aligned_cols=109 Identities=15% Similarity=0.212 Sum_probs=68.4
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCce--------eecCCCcEEeeCCCccCcCCCCccEEE--Ec
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQ--------IVASQGVKIIADKSISDAAESVYDLII--LP 289 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~--------v~~~~g~~v~~~~~l~~~~~~~~D~li--vp 289 (405)
.++|.|++-+|-+--|-..+...|...|++|+++-+....+ .-...|..+..+ .++. ...++|++| +-
T Consensus 52 ~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~-~~~~~dliVDalf 129 (502)
T 3rss_A 52 DYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVVEQ-FEPS-ILNEFDVVVDAIF 129 (502)
T ss_dssp TCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEESC-CCGG-GGGGCSEEEEESC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCceecc-cccc-cCCCCCEEEEeCc
Confidence 47999999999999999999999999999999987764200 001124444421 1211 124466554 22
Q ss_pred C-CccchHhhhcChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCC
Q 015523 290 G-GVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLL 334 (405)
Q Consensus 290 g-G~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL 334 (405)
| |... .-.+.+.++|+...+.++++.|+.--+-+=+..|-.
T Consensus 130 G~Gl~~----~l~~~~~~~i~~iN~~~~~vvAvDiPSGl~~dtG~~ 171 (502)
T 3rss_A 130 GTGLRG----EITGEYAEIINLVNKSGKVVVSVDVPSGIDSNTGKV 171 (502)
T ss_dssp STTCCS----CCCHHHHHHHHHHHTTCCEEEEESSCTTBCTTTCCB
T ss_pred cCCCCC----CCcHHHHHHHHHHHcCCCCEEEecCCCCccCCCCCc
Confidence 2 2211 124566677777777889999998665555565543
No 205
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=33.82 E-value=86 Score=25.34 Aligned_cols=42 Identities=5% Similarity=-0.017 Sum_probs=28.2
Q ss_pred CcccEEEEcCCchhhhccccChHHHHHHHHHHHcCCEEEEEccch
Q 015523 78 QVFDLIALPGGMPGSVRLRDCEILKKITSKQAEEKRLYGAICAAP 122 (405)
Q Consensus 78 ~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~g~ 122 (405)
.+||.|++-.- .....-.+.+..||.+..-++|.++.+|+.+
T Consensus 86 ~~yD~iilg~P---vy~g~~~~~~~~fl~~~~l~gk~v~~f~t~g 127 (171)
T 4ici_A 86 GTYDVVFIGYP---IWWDLAPRIINTFIEGHSLKGKTVVPFATSG 127 (171)
T ss_dssp GGCSEEEEEEE---CBTTBCCHHHHHHHHHSCCTTSEEEEEEECS
T ss_pred hHCCEEEEecc---cccCCchHHHHHHHHHcCCCcCEEEEEEecC
Confidence 47999988432 1112234678888887656788888887754
No 206
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=32.98 E-value=60 Score=26.20 Aligned_cols=93 Identities=19% Similarity=0.170 Sum_probs=57.8
Q ss_pred CcCEEEEEeCCCC---cHHHHHHHHHHHHhCC-C---eEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcC-
Q 015523 219 RMPRVLIPIANGS---EEIEIVTIVDILRRAK-V---DVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPG- 290 (405)
Q Consensus 219 ~~~~V~il~~~g~---~~~e~~~~~~~l~~~~-~---~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpg- 290 (405)
...||+|+...-. .+.-+.++.+.|.+.| . +++++..-|- .-+.+......+ ..+||+++..|
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGa------fEiP~aa~~la~---~~~yDavIaLG~ 81 (156)
T 3nq4_A 11 PDARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGA------YELPLATEALAK---SGKYDAVVALGT 81 (156)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESST------TTHHHHHHHHHH---HCSCSEEEEEEE
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcH------HHHHHHHHHHHh---cCCCCEEEEeee
Confidence 4579999997643 3366778999999998 5 6787766552 112222221111 25799998765
Q ss_pred ---CccchHhhhcChHHHHHHHHHhhcCCEEEE
Q 015523 291 ---GVAGAERLQKSRILKKLLKEQKVAGRIYGA 320 (405)
Q Consensus 291 ---G~~~~~~~~~~~~l~~~l~~~~~~~k~i~a 320 (405)
|.-....+..+.....+.+-..+.+.||+.
T Consensus 82 VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~~ 114 (156)
T 3nq4_A 82 VIRGGTAHFEYVAGGASNGLASVAQDSGVPVAF 114 (156)
T ss_dssp EECCSSTHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred eecCCchHHHHHHHHHHHHHHHHHhccCCCEEE
Confidence 322334455566666666667788888764
No 207
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=32.93 E-value=37 Score=30.12 Aligned_cols=87 Identities=15% Similarity=0.111 Sum_probs=54.2
Q ss_pred CcEEEEEecC---CCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh
Q 015523 17 ALNVLVPVGF---GTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV 93 (405)
Q Consensus 17 ~~ki~ill~~---g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~ 93 (405)
.++|++++.+ .|...-+.++.+.+++.|+++.+...... +-.-. ..++.+....+|++|+.+..
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~~--------~~i~~l~~~~vdgiIi~~~~---- 68 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN-EETQM--------SQIENMINRGVDVLVIIPYN---- 68 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTC-HHHHH--------HHHHHHHHTTCSEEEEECSS----
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCC-HHHHH--------HHHHHHHHcCCCEEEEeCCC----
Confidence 4589999865 46666677788888889999998876543 11000 01111111358999987651
Q ss_pred ccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 94 RLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
...+.+.++++.+.+.|++.+..
T Consensus 69 ----~~~~~~~~~~~~~~~iPvV~~~~ 91 (313)
T 3m9w_A 69 ----GQVLSNVVKEAKQEGIKVLAYDR 91 (313)
T ss_dssp ----TTSCHHHHHHHHTTTCEEEEESS
T ss_pred ----hhhhHHHHHHHHHCCCeEEEECC
Confidence 11223456667778999988766
No 208
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=32.68 E-value=27 Score=30.62 Aligned_cols=90 Identities=9% Similarity=-0.098 Sum_probs=51.4
Q ss_pred CCCCcEEEEEecCC---CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCch
Q 015523 14 PSFALNVLVPVGFG---TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMP 90 (405)
Q Consensus 14 ~~~~~ki~ill~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~ 90 (405)
..+..+|++++.+- |...-+.++.+.+++.|+++.+...+.. +-.- ...++.+....+|++|+.+..
T Consensus 5 ~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~~~~l~~~~vdgiI~~~~~- 74 (293)
T 3l6u_A 5 SPKRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNS-RISE--------REQILEFVHLKVDAIFITTLD- 74 (293)
T ss_dssp ----CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSC-HHHH--------HHHHHHHHHTTCSEEEEECSC-
T ss_pred CCCCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCC-HHHH--------HHHHHHHHHcCCCEEEEecCC-
Confidence 44567999998653 3344456666777788999998876543 1100 001111111358999986541
Q ss_pred hhhccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 91 GSVRLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
.....+.+++..+.+.|++.+..
T Consensus 75 -------~~~~~~~~~~~~~~~iPvV~~~~ 97 (293)
T 3l6u_A 75 -------DVYIGSAIEEAKKAGIPVFAIDR 97 (293)
T ss_dssp -------TTTTHHHHHHHHHTTCCEEEESS
T ss_pred -------hHHHHHHHHHHHHcCCCEEEecC
Confidence 12233456666677999888866
No 209
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=32.67 E-value=48 Score=27.28 Aligned_cols=99 Identities=13% Similarity=0.067 Sum_probs=50.3
Q ss_pred CcCEEEEEeCCCCcHHH--HHHHHHHHHhCCCeEEEEeecCCc-eee-cCCCcEEeeC----CCccCcCCCCccEEEEcC
Q 015523 219 RMPRVLIPIANGSEEIE--IVTIVDILRRAKVDVVVASVERST-QIV-ASQGVKIIAD----KSISDAAESVYDLIILPG 290 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e--~~~~~~~l~~~~~~v~~vs~~~~~-~v~-~~~g~~v~~~----~~l~~~~~~~~D~livpg 290 (405)
+|+||.|+.+. ..-.+ .-.+.+.+...|.+++++....-- +.. +..+.. ..+ ...+++ .++|+||+..
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~-~~d~~~~~~~~~l--~~aD~ii~gs 78 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFD-KVKDIPEVTLDDM--RWADGFAIGS 78 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCCCSCGGGGTTCCGG-GSTTSCBCCHHHH--HHCSEEEEEE
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhHhCChhhhhccCCC-cccccccccHHHH--HhCCEEEEEC
Confidence 35789888877 33222 233455666678888888775410 110 111110 000 012333 5689998854
Q ss_pred CccchHhhhcChHHHHHHHHHh-------hcCCEEEEEchH
Q 015523 291 GVAGAERLQKSRILKKLLKEQK-------VAGRIYGAVCSS 324 (405)
Q Consensus 291 G~~~~~~~~~~~~l~~~l~~~~-------~~~k~i~aic~g 324 (405)
- .....-...+..||.+.. -++|+++.++++
T Consensus 79 P---~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~ 116 (199)
T 2zki_A 79 P---TRYGNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEA 116 (199)
T ss_dssp E---CBTTBCCHHHHHHHHTTHHHHHTTSSTTCEEEEEEEB
T ss_pred C---ccccCccHHHHHHHHHhhhcccccccCCCEEEEEEeC
Confidence 2 122223455666666542 356776666543
No 210
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=32.60 E-value=20 Score=31.13 Aligned_cols=101 Identities=15% Similarity=0.089 Sum_probs=52.1
Q ss_pred cCEEEEEeCC----CCcHHHHHHHHHHHHhC-CCeEEEEeecCCceeecCCCc-E------Eee-C--CCccCc--CCCC
Q 015523 220 MPRVLIPIAN----GSEEIEIVTIVDILRRA-KVDVVVASVERSTQIVASQGV-K------IIA-D--KSISDA--AESV 282 (405)
Q Consensus 220 ~~~V~il~~~----g~~~~e~~~~~~~l~~~-~~~v~~vs~~~~~~v~~~~g~-~------v~~-~--~~l~~~--~~~~ 282 (405)
||+|.++... |....=.-.+.+.+... |.+++++.+..- .+.--.|. . -.+ . ..++++ ...+
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~~~-~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~ 79 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNS-ELEISNSDSEELFKKGIDRQSNADDGGVIKKELLE 79 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECTTTC-CCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEcccC-CCCCCCchHHhhccCCCCccchHHHHHHHHHHHHH
Confidence 4688888764 33333344456677766 899999877653 22111111 0 000 0 111110 1256
Q ss_pred ccEEEEcCCccchHhhhcChHHHHHHHHHh-------hcCCEEEEEchH
Q 015523 283 YDLIILPGGVAGAERLQKSRILKKLLKEQK-------VAGRIYGAVCSS 324 (405)
Q Consensus 283 ~D~livpgG~~~~~~~~~~~~l~~~l~~~~-------~~~k~i~aic~g 324 (405)
+|+||+..- .....-...+..||.+.. -.||+++.++++
T Consensus 80 AD~iI~~sP---~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~ 125 (242)
T 1sqs_A 80 SDIIIISSP---VYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVA 125 (242)
T ss_dssp CSEEEEEEE---ECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEE
T ss_pred CCEEEEEcc---ccccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeC
Confidence 899988542 222234556666666542 346777666654
No 211
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=32.51 E-value=15 Score=30.51 Aligned_cols=99 Identities=9% Similarity=-0.012 Sum_probs=48.8
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHh---cCCEEEEEecCCCceeEec---cCcEEecC--cccCCCCCCcccEEEEcC
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRR---AGAQVTMASVEPQLEVEAS---SGTRLVAD--TSISNCSHQVFDLIALPG 87 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~---~~~~v~~vs~~~~~~v~~~---~g~~v~~~--~~~~~~~~~~~d~liipg 87 (405)
.+|||.++...--...--..+.+.+.+ .+.+++++....- |+-.. .+ ...++ ...+++ .++|.||+-.
T Consensus 5 ~~Mkilii~gS~r~~g~t~~la~~i~~~l~~g~~v~~~dl~~~-p~~~~~~~~~-~~~~~~~~~~~~l--~~aD~ii~~s 80 (193)
T 1rtt_A 5 DDIKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADISGI-PLYNEDVYAL-GFPPAVERFREQI--RAADALLFAT 80 (193)
T ss_dssp --CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECCCTTC-CCCCHHHHTT-CCCHHHHHHHHHH--HHCSEEEEEC
T ss_pred CCceEEEEECCCCCCChHHHHHHHHHHhccCCCeEEEEeHHHC-CCCCcccccc-CCCHHHHHHHHHH--HhCCEEEEEc
Confidence 346898888663211222233333332 3678888776542 33111 01 00000 001122 2589999854
Q ss_pred CchhhhccccChHHHHHHHHHH------HcCCEEEEEccc
Q 015523 88 GMPGSVRLRDCEILKKITSKQA------EEKRLYGAICAA 121 (405)
Q Consensus 88 g~~~~~~~~~~~~~~~~l~~~~------~~~~~i~aic~g 121 (405)
= .....-...+..||-+.. -++|+++.++++
T Consensus 81 P---~y~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~ 117 (193)
T 1rtt_A 81 P---EYNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGAS 117 (193)
T ss_dssp C---EETTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEEC
T ss_pred c---ccccCcCHHHHHHHHHhccccCcccCCCeEEEEEeC
Confidence 2 111223456777777664 357888888775
No 212
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=32.25 E-value=1.6e+02 Score=22.74 Aligned_cols=65 Identities=15% Similarity=0.088 Sum_probs=39.6
Q ss_pred CCcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcC
Q 015523 16 FALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPG 87 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipg 87 (405)
++++|+|+=...-...=-......|.+.||++.-+.++.. .+ .|.++.+ ++++++ ...|++++.-
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~-~i---~G~~~~~--s~~el~-~~vDlvii~v 77 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD-EI---EGLKCYR--SVRELP-KDVDVIVFVV 77 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-EE---TTEECBS--SGGGSC-TTCCEEEECS
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCC-eE---CCeeecC--CHHHhC-CCCCEEEEEe
Confidence 5678999965432221122445557778999888888765 55 5666554 345555 3578888743
No 213
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=32.24 E-value=46 Score=29.01 Aligned_cols=88 Identities=15% Similarity=0.038 Sum_probs=50.2
Q ss_pred CcCEEEEEeCCCCc---HHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccch
Q 015523 219 RMPRVLIPIANGSE---EIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGA 295 (405)
Q Consensus 219 ~~~~V~il~~~g~~---~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~ 295 (405)
+..+|++++.+-.+ ..-+.++.+.+.+.|+++.+...... +-.. ...++.+....+|++|+.+..
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~~~~l~~~~vdgiIi~~~~--- 71 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRN-DQTQ--------VSQIQTLIAQKPDAIIEQLGN--- 71 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHHH--------HHHHHHHHHHCCSEEEEESSC---
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCC-HHHH--------HHHHHHHHHcCCCEEEEeCCC---
Confidence 45799999986433 33356777788888999998866543 1000 011122222467888876542
Q ss_pred HhhhcChHHHHHHHHHhhcCCEEEEEch
Q 015523 296 ERLQKSRILKKLLKEQKVAGRIYGAVCS 323 (405)
Q Consensus 296 ~~~~~~~~l~~~l~~~~~~~k~i~aic~ 323 (405)
.......+++..+.+.+++.+..
T Consensus 72 -----~~~~~~~~~~~~~~~iPvV~~~~ 94 (291)
T 3l49_A 72 -----LDVLNPWLQKINDAGIPLFTVDT 94 (291)
T ss_dssp -----HHHHHHHHHHHHHTTCCEEEESC
T ss_pred -----hhhhHHHHHHHHHCCCcEEEecC
Confidence 11223345555566777766643
No 214
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=31.52 E-value=32 Score=27.73 Aligned_cols=88 Identities=18% Similarity=0.232 Sum_probs=41.9
Q ss_pred cCEEEEEeCCCCcHHH--HHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 220 MPRVLIPIANGSEEIE--IVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e--~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
|+++.|+-+...--.+ .-.+.+.|...+++++++..+.. ...++ .++|.+++.....+...
T Consensus 9 ~~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~d~ii~g~pt~g~G~ 71 (167)
T 1ykg_A 9 MPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDY---------------KFKQI--ASEKLLIVVTSTQGEGE 71 (167)
T ss_dssp ---CEEEEECSSSHHHHHHHHHHHHHHHHTCCCEEEEGGGC---------------CGGGG--GGCSEEEEEEECBGGGB
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEeehhhC---------------CHHHh--ccCCeEEEEEcccCCCc
Confidence 5677777665442222 23345556666777776654431 12233 56888887543221111
Q ss_pred hhc-ChHHHHHHHHH---hhcCCEEEEEchH
Q 015523 298 LQK-SRILKKLLKEQ---KVAGRIYGAVCSS 324 (405)
Q Consensus 298 ~~~-~~~l~~~l~~~---~~~~k~i~aic~g 324 (405)
+.. -..++++|+.. .-+++.++.+|.|
T Consensus 72 ~p~~~~~f~~~l~~~~~~~l~~k~~avfg~G 102 (167)
T 1ykg_A 72 PPEEAVALHKFLFSKKAPKLENTAFAVFSLG 102 (167)
T ss_dssp CCGGGHHHHHHHTSTTCCCCTTCEEEEEEEC
T ss_pred CChhHHHHHHHHHhccccccCCCEEEEEeec
Confidence 111 13344444321 1246777777654
No 215
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=31.44 E-value=29 Score=30.68 Aligned_cols=89 Identities=9% Similarity=-0.155 Sum_probs=50.6
Q ss_pred CCcEEEEEecCC---CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhh
Q 015523 16 FALNVLVPVGFG---TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGS 92 (405)
Q Consensus 16 ~~~ki~ill~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~ 92 (405)
+.++|++++.+. |...-+.++.+.+++.|+++.++......+-.- ...++.+....+|++|+.+..
T Consensus 3 ~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~--------~~~i~~l~~~~vdgiIi~~~~--- 71 (305)
T 3g1w_A 3 LNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQ--------ITVLEQAIAKNPAGIAISAID--- 71 (305)
T ss_dssp --CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHH--------HHHHHHHHHHCCSEEEECCSS---
T ss_pred CCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHH--------HHHHHHHHHhCCCEEEEcCCC---
Confidence 467899998663 444555666777778899998854332201000 001111111358999987651
Q ss_pred hccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 93 VRLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
.....+.+++..+.+.|++.+..
T Consensus 72 -----~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 72 -----PVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp -----TTTTHHHHHHHHHTTCCEEEESS
T ss_pred -----HHHHHHHHHHHHHCCCcEEEECC
Confidence 12233456666778899887765
No 216
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=31.27 E-value=1.7e+02 Score=21.98 Aligned_cols=71 Identities=10% Similarity=0.115 Sum_probs=47.5
Q ss_pred EEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhccccCh
Q 015523 20 VLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRLRDCE 99 (405)
Q Consensus 20 i~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~~~~~ 99 (405)
.-+++.....+ ++..+.+.|...+|+++- +.+. ..|++|+..|.... ..+
T Consensus 5 ~~lFISh~~~d-~~~~L~~~l~~~~f~~~~-----------------------~~I~--~~~~vIvL~G~~t~----~s~ 54 (111)
T 1eiw_A 5 IRLYITEGEVE-DYRVFLERLEQSGLEWRP-----------------------ATPE--DADAVIVLAGLWGT----RRD 54 (111)
T ss_dssp EEEEECCCCSH-HHHHHHHHHHHHCSCEEE-----------------------CCSS--SCSEEEEEGGGTTT----SHH
T ss_pred EEEEEecccHh-HHHHHHHHHhCCCCeeec-----------------------Cccc--cCCEEEEEeCCCcC----CCh
Confidence 33566666666 777777777655776664 3343 57999998884211 234
Q ss_pred HHHHHHHHHHHcCCEEEEEcc
Q 015523 100 ILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 100 ~~~~~l~~~~~~~~~i~aic~ 120 (405)
-...-|..+.+.+|||.++-.
T Consensus 55 wv~~EI~~A~~~gkpIigV~~ 75 (111)
T 1eiw_A 55 EILGAVDLARKSSKPIITVRP 75 (111)
T ss_dssp HHHHHHHHHTTTTCCEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEEc
Confidence 555667788899999998854
No 217
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=30.40 E-value=60 Score=29.15 Aligned_cols=96 Identities=18% Similarity=0.182 Sum_probs=57.1
Q ss_pred CCcCEEEEEeCC--CC--cHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCcc
Q 015523 218 DRMPRVLIPIAN--GS--EEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVA 293 (405)
Q Consensus 218 ~~~~~V~il~~~--g~--~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~ 293 (405)
.+|+|+.+++-+ |- ...-+..+...|.+.++++++...+....... ...+.. .++|.|++.||-
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~----------~~~~~~-~~~d~vv~~GGD- 73 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATK----------YCQEFA-SKVDLIIVFGGD- 73 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHH----------HHHHHT-TTCSEEEEEECH-
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHH----------HHHHhh-cCCCEEEEEccc-
Confidence 357899888866 32 12334567788888998888775443201100 011111 368899998883
Q ss_pred chHhhhcChHHHHHHHHHhh--cCCEEEEEchHHH-HHH-HcCC
Q 015523 294 GAERLQKSRILKKLLKEQKV--AGRIYGAVCSSPI-VLH-KHGL 333 (405)
Q Consensus 294 ~~~~~~~~~~l~~~l~~~~~--~~k~i~aic~g~~-~La-~aGl 333 (405)
..+.+.++.... ...+++.|=.|+. .+| ..|+
T Consensus 74 --------GTl~~v~~~l~~~~~~~~l~iiP~Gt~N~~ar~lg~ 109 (304)
T 3s40_A 74 --------GTVFECTNGLAPLEIRPTLAIIPGGTCNDFSRTLGV 109 (304)
T ss_dssp --------HHHHHHHHHHTTCSSCCEEEEEECSSCCHHHHHTTC
T ss_pred --------hHHHHHHHHHhhCCCCCcEEEecCCcHHHHHHHcCC
Confidence 355566666655 5677877766665 444 4454
No 218
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=30.39 E-value=1.4e+02 Score=26.71 Aligned_cols=88 Identities=10% Similarity=0.057 Sum_probs=41.4
Q ss_pred cCCCCCcEEEEEecCCCchhhHHHHHHHHHh-cCCEEEE-EecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCc
Q 015523 12 ISPSFALNVLVPVGFGTEEMEAVIIVDVLRR-AGAQVTM-ASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGM 89 (405)
Q Consensus 12 ~~~~~~~ki~ill~~g~~~~e~~~~~~~l~~-~~~~v~~-vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~ 89 (405)
|..++++||+|+=+ |.....+ ...+.+ .++++.. +..+.. .... .|.....-..+.+. .+.|++++....
T Consensus 4 M~~M~~irv~IIG~-G~iG~~~---~~~l~~~~~~elvav~d~~~~-~~~~-~g~~~~~~~~l~~~--~~~DvViiatp~ 75 (304)
T 3bio_A 4 MTDDKKIRAAIVGY-GNIGRYA---LQALREAPDFEIAGIVRRNPA-EVPF-ELQPFRVVSDIEQL--ESVDVALVCSPS 75 (304)
T ss_dssp ----CCEEEEEECC-SHHHHHH---HHHHHHCTTEEEEEEECC---------CCTTSCEESSGGGS--SSCCEEEECSCH
T ss_pred CccCCCCEEEEECC-hHHHHHH---HHHHhcCCCCEEEEEEcCCHH-HHHH-cCCCcCCHHHHHhC--CCCCEEEECCCc
Confidence 44345679999954 4433332 344444 4666653 333332 2222 33321000111222 368999998751
Q ss_pred hhhhccccChHHHHHHHHHHHcCCEEE
Q 015523 90 PGSVRLRDCEILKKITSKQAEEKRLYG 116 (405)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~~~i~ 116 (405)
....+.+.++.+.|+.+.
T Consensus 76 ---------~~h~~~~~~al~aG~~Vi 93 (304)
T 3bio_A 76 ---------REVERTALEILKKGICTA 93 (304)
T ss_dssp ---------HHHHHHHHHHHTTTCEEE
T ss_pred ---------hhhHHHHHHHHHcCCeEE
Confidence 122455667788898876
No 219
>3i9v_6 NADH-quinone oxidoreductase subunit 6; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_6* 2fug_6* 3iam_6* 3ias_6* 3m9s_6*
Probab=30.32 E-value=34 Score=28.36 Aligned_cols=41 Identities=15% Similarity=0.142 Sum_probs=30.7
Q ss_pred CCCccEEEEcCCccchHhhhcChHHHHHHHHHhhcCCEEEEEchHH
Q 015523 280 ESVYDLIILPGGVAGAERLQKSRILKKLLKEQKVAGRIYGAVCSSP 325 (405)
Q Consensus 280 ~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~ 325 (405)
+.+.|+++|-|... .+....++.+.++..+-|+|+|+++=+
T Consensus 72 PrqaDiliVeG~Vt-----~~m~~~l~~~~e~~p~pk~VIAvGsCA 112 (181)
T 3i9v_6 72 PRQADVMIVAGRLS-----KKMAPVMRRVWEQMPDPKWVISMGACA 112 (181)
T ss_dssp --CCCCEEEESCCB-----TTTHHHHHHHHHSSCSSCCEEEEHHHH
T ss_pred CCCceEEEEeccCC-----cccHHHHHHHHHHcCCCceEEEeeccc
Confidence 46789999999852 134567788888889999999998743
No 220
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=29.96 E-value=30 Score=30.30 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=36.2
Q ss_pred cCEEEEEeCCC---CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCC
Q 015523 220 MPRVLIPIANG---SEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGG 291 (405)
Q Consensus 220 ~~~V~il~~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG 291 (405)
..+|++++.+- |...-+.++.+.+.+.|+++.+...... +-.. ...++.+....+|++|+.+.
T Consensus 2 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~-~~~~--------~~~~~~l~~~~vdgiI~~~~ 67 (290)
T 2fn9_A 2 KGKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQND-TAKE--------SAHFDAIIAAGYDAIIFNPT 67 (290)
T ss_dssp -CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHHH--------HHHHHHHHHTTCSEEEECCS
T ss_pred ceEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCCCCC-HHHH--------HHHHHHHHHcCCCEEEEecC
Confidence 46899998753 3334455666777888999887755432 1000 00122222256899998654
No 221
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=29.45 E-value=55 Score=28.52 Aligned_cols=93 Identities=12% Similarity=-0.056 Sum_probs=53.5
Q ss_pred CCCCcEEEEEecC---CCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCch
Q 015523 14 PSFALNVLVPVGF---GTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMP 90 (405)
Q Consensus 14 ~~~~~ki~ill~~---g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~ 90 (405)
..+.++|++++.+ .|...-+.++.+.+++.|+++.+...... +-.. ...++.+....+|.+|+.+..
T Consensus 12 ~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~~~~l~~~~vdgiIi~~~~- 81 (298)
T 3tb6_A 12 LHSNKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNN-PDNE--------RRGLENLLSQHIDGLIVEPTK- 81 (298)
T ss_dssp ---CCEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTC-HHHH--------HHHHHHHHHTCCSEEEECCSS-
T ss_pred cccCceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC-hHHH--------HHHHHHHHHCCCCEEEEeccc-
Confidence 3344789999865 34455566777788888999998876543 1100 001111112358999997651
Q ss_pred hhhccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 91 GSVRLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
... .....+.+++..+.+.|++.+..
T Consensus 82 -~~~---~~~~~~~~~~~~~~~iPvV~~~~ 107 (298)
T 3tb6_A 82 -SAL---QTPNIGYYLNLEKNGIPFAMINA 107 (298)
T ss_dssp -TTS---CCTTHHHHHHHHHTTCCEEEESS
T ss_pred -ccc---cCCcHHHHHHHHhcCCCEEEEec
Confidence 110 11223455666677999988766
No 222
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=29.27 E-value=31 Score=30.16 Aligned_cols=89 Identities=10% Similarity=-0.055 Sum_probs=53.5
Q ss_pred CCCcEEEEEecCC---CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchh
Q 015523 15 SFALNVLVPVGFG---TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPG 91 (405)
Q Consensus 15 ~~~~ki~ill~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~ 91 (405)
.+.++|++++.+- |...-+.++.+.+++.|+++.+...... +-.- ...++.+....+|++|+.+..
T Consensus 3 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~~~~l~~~~vdgiIi~~~~-- 71 (291)
T 3l49_A 3 LEGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRN-DQTQ--------VSQIQTLIAQKPDAIIEQLGN-- 71 (291)
T ss_dssp CTTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHHH--------HHHHHHHHHHCCSEEEEESSC--
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCC-HHHH--------HHHHHHHHHcCCCEEEEeCCC--
Confidence 3567899998753 2234456677777888999998865543 1100 001111111358999986641
Q ss_pred hhccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 92 SVRLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
. ......+++..+.+.|++.+..
T Consensus 72 ~------~~~~~~~~~~~~~~iPvV~~~~ 94 (291)
T 3l49_A 72 L------DVLNPWLQKINDAGIPLFTVDT 94 (291)
T ss_dssp H------HHHHHHHHHHHHTTCCEEEESC
T ss_pred h------hhhHHHHHHHHHCCCcEEEecC
Confidence 1 2334556777778999887765
No 223
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=29.12 E-value=56 Score=30.40 Aligned_cols=92 Identities=11% Similarity=-0.082 Sum_probs=50.5
Q ss_pred CCcEEEEEecCCCc--hhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh
Q 015523 16 FALNVLVPVGFGTE--EMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV 93 (405)
Q Consensus 16 ~~~ki~ill~~g~~--~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~ 93 (405)
+.+|+.|+.+.... ..=...+.+.+.+.+++++++..... .. .....++ .++|.+++..-...
T Consensus 255 ~~~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~~~~~~-~~----------~~~~~~l--~~~d~iiigsP~y~-- 319 (404)
T 2ohh_A 255 VDERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHED-DR----------SEIVKDI--LESGAIALGAPTIY-- 319 (404)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEEETTTS-CH----------HHHHHHH--HTCSEEEEECCEET--
T ss_pred CCCcEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCC-CH----------HHHHHHH--HHCCEEEEECcccc--
Confidence 34678777766433 22333455666667888888876542 10 0111123 25899998653211
Q ss_pred ccccChHHHHHHHHHH---H---cCCEEEEEccchH
Q 015523 94 RLRDCEILKKITSKQA---E---EKRLYGAICAAPA 123 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~---~---~~~~i~aic~g~~ 123 (405)
....+.+..|+.... . ++|+++.+|+++.
T Consensus 320 -~~~~~~~k~~ld~l~~~~~~~l~~k~~~~~~~~g~ 354 (404)
T 2ohh_A 320 -DEPYPSVGDLLMYLRGLKFNRTLTRKALVFGSMGG 354 (404)
T ss_dssp -TEECTHHHHHHHHHHHHCGGGTCCEEEEEEEEESS
T ss_pred -ccchHHHHHHHHHhhhccccccCCCEEEEEEecCC
Confidence 112334555555433 3 7889988887654
No 224
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=28.63 E-value=1.2e+02 Score=23.19 Aligned_cols=64 Identities=16% Similarity=0.117 Sum_probs=41.5
Q ss_pred CcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcC
Q 015523 219 RMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPG 290 (405)
Q Consensus 219 ~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpg 290 (405)
++++|+|+=...-...--..++..|.+.||++.-+.|+.+ .+ .|.+..+ ++++++ . .|.++|--
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~-~i---~G~~~y~--sl~dlp-~-vDlavi~~ 66 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKG-EV---LGKTIIN--ERPVIE-G-VDTVTLYI 66 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCS-EE---TTEECBC--SCCCCT-T-CCEEEECS
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCC-cC---CCeeccC--ChHHCC-C-CCEEEEEe
Confidence 4678888855433222234566777788999888888775 44 4655554 567773 3 88887743
No 225
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=28.63 E-value=44 Score=29.25 Aligned_cols=92 Identities=8% Similarity=-0.091 Sum_probs=51.4
Q ss_pred CCCCcEEEEEecCC----CchhhHHHHHHHHHhc-CCEEEEEecCCC-ceeEeccCcEEecCcccCCCCCCcccEEEEcC
Q 015523 14 PSFALNVLVPVGFG----TEEMEAVIIVDVLRRA-GAQVTMASVEPQ-LEVEASSGTRLVADTSISNCSHQVFDLIALPG 87 (405)
Q Consensus 14 ~~~~~ki~ill~~g----~~~~e~~~~~~~l~~~-~~~v~~vs~~~~-~~v~~~~g~~v~~~~~~~~~~~~~~d~liipg 87 (405)
..+.++|++++.+. |...-+.++.+.+++. ++.+.+...... ...... ...++.+....+|++|+.+
T Consensus 5 ~~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~-------~~~i~~l~~~~vdgiii~~ 77 (304)
T 3gbv_A 5 SNKKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSF-------VATSQAVIEEQPDGVMFAP 77 (304)
T ss_dssp --CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHH-------HHHHHHHHTTCCSEEEECC
T ss_pred cCCcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHH-------HHHHHHHHhcCCCEEEECC
Confidence 44667999998664 4445556677777777 888887653211 000000 0011122223689999977
Q ss_pred CchhhhccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 88 GMPGSVRLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 88 g~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
.. . +.....+++..+.+.|++.+..
T Consensus 78 ~~--~------~~~~~~~~~~~~~~iPvV~~~~ 102 (304)
T 3gbv_A 78 TV--P------QYTKGFTDALNELGIPYIYIDS 102 (304)
T ss_dssp SS--G------GGTHHHHHHHHHHTCCEEEESS
T ss_pred CC--h------HHHHHHHHHHHHCCCeEEEEeC
Confidence 51 1 1223445566667899888776
No 226
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=27.90 E-value=36 Score=29.90 Aligned_cols=92 Identities=7% Similarity=-0.071 Sum_probs=48.7
Q ss_pred ccCCcCEEEEEeCCC----CcHHHHHHHHHHHHhC-CCeEEEEeecCC-ceeecCCCcEEeeCCCccCcCCCCccEEEEc
Q 015523 216 FFDRMPRVLIPIANG----SEEIEIVTIVDILRRA-KVDVVVASVERS-TQIVASQGVKIIADKSISDAAESVYDLIILP 289 (405)
Q Consensus 216 ~~~~~~~V~il~~~g----~~~~e~~~~~~~l~~~-~~~v~~vs~~~~-~~v~~~~g~~v~~~~~l~~~~~~~~D~livp 289 (405)
+..+..+|++++.+- |...=+.++.+.+.+. ||.+.+...... ..... ....++.+....+|++|+.
T Consensus 4 ~~~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~-------~~~~i~~l~~~~vdgiii~ 76 (304)
T 3gbv_A 4 ASNKKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNS-------FVATSQAVIEEQPDGVMFA 76 (304)
T ss_dssp ---CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHH-------HHHHHHHHHTTCCSEEEEC
T ss_pred ccCCcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHH-------HHHHHHHHHhcCCCEEEEC
Confidence 345678999998664 4444456677777888 888888754321 00000 0011222223678999987
Q ss_pred CCccchHhhhcChHHHHHHHHHhhcCCEEEEEc
Q 015523 290 GGVAGAERLQKSRILKKLLKEQKVAGRIYGAVC 322 (405)
Q Consensus 290 gG~~~~~~~~~~~~l~~~l~~~~~~~k~i~aic 322 (405)
+... . .... .++++.+.+.+++.+.
T Consensus 77 ~~~~--~---~~~~---~~~~~~~~~iPvV~~~ 101 (304)
T 3gbv_A 77 PTVP--Q---YTKG---FTDALNELGIPYIYID 101 (304)
T ss_dssp CSSG--G---GTHH---HHHHHHHHTCCEEEES
T ss_pred CCCh--H---HHHH---HHHHHHHCCCeEEEEe
Confidence 6521 1 1222 3344445566666654
No 227
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=27.49 E-value=60 Score=28.48 Aligned_cols=38 Identities=26% Similarity=0.356 Sum_probs=33.7
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCC
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERS 258 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~ 258 (405)
||||.|--=||....-+..+++.|...+ +|.+++|..+
T Consensus 1 ~M~ILlTNDDGi~apGi~aL~~~l~~~g-~V~VVAP~~~ 38 (251)
T 2phj_A 1 MPTFLLVNDDGYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp -CEEEEECSSCTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 4788888888999999999999999988 9999999875
No 228
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=27.17 E-value=84 Score=25.26 Aligned_cols=94 Identities=16% Similarity=0.071 Sum_probs=57.7
Q ss_pred CcCEEEEEeCCCC---cHHHHHHHHHHHHhCCC---eEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcC--
Q 015523 219 RMPRVLIPIANGS---EEIEIVTIVDILRRAKV---DVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPG-- 290 (405)
Q Consensus 219 ~~~~V~il~~~g~---~~~e~~~~~~~l~~~~~---~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpg-- 290 (405)
...||+|+...-. .+.-+.++.+.|.+.|. +++++..-|- .-+.+... .+.+ ..+||+++..|
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGa------fEiP~aa~-~la~--~~~yDavIalG~V 81 (154)
T 1hqk_A 11 EGLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGS------WEIPVAAG-ELAR--KEDIDAVIAIGVL 81 (154)
T ss_dssp TTCCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSG------GGHHHHHH-HHHT--CTTCCEEEEEEEE
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHH-HHHh--cCCCCEEEEeeee
Confidence 4578999997643 33667788999999984 5677755542 11111111 1111 26799998665
Q ss_pred --CccchHhhhcChHHHHHHHHHhhcCCEEEEE
Q 015523 291 --GVAGAERLQKSRILKKLLKEQKVAGRIYGAV 321 (405)
Q Consensus 291 --G~~~~~~~~~~~~l~~~l~~~~~~~k~i~ai 321 (405)
|.-....+..+.....+.+-....+.||+.-
T Consensus 82 IrG~T~Hfd~Va~~vs~gl~~v~l~~~vPV~~G 114 (154)
T 1hqk_A 82 IRGATPHFDYIASEVSKGLANLSLELRKPITFG 114 (154)
T ss_dssp ECCSSTHHHHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred ecCCchHHHHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 3223344555666666777677888888753
No 229
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=26.97 E-value=61 Score=28.01 Aligned_cols=86 Identities=13% Similarity=-0.028 Sum_probs=49.9
Q ss_pred CCcCEEEEEeCCC---CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccc
Q 015523 218 DRMPRVLIPIANG---SEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAG 294 (405)
Q Consensus 218 ~~~~~V~il~~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~ 294 (405)
++..+|++++.+- |...-+.++.+.+.+.||++.+...... .-.. ...++.+....+|++|+.+...
T Consensus 5 ~~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~-~~~~--------~~~~~~l~~~~vdgiIi~~~~~- 74 (276)
T 3jy6_A 5 QSSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANAD-IERE--------KTLLRAIGSRGFDGLILQSFSN- 74 (276)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTC-HHHH--------HHHHHHHHTTTCSEEEEESSCC-
T ss_pred CCCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC-HHHH--------HHHHHHHHhCCCCEEEEecCCc-
Confidence 3568999999763 3344455667777888999998876653 1000 0112222235688888766421
Q ss_pred hHhhhcChHHHHHHHHHhhcCCEEEEEch
Q 015523 295 AERLQKSRILKKLLKEQKVAGRIYGAVCS 323 (405)
Q Consensus 295 ~~~~~~~~~l~~~l~~~~~~~k~i~aic~ 323 (405)
.+.++++.+.+.|++.+..
T Consensus 75 ----------~~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 75 ----------PQTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp ----------HHHHHHHHTTSSCEEEESC
T ss_pred ----------HHHHHHHHHCCCCEEEEec
Confidence 2334444556667766653
No 230
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=26.23 E-value=37 Score=31.06 Aligned_cols=96 Identities=11% Similarity=0.133 Sum_probs=53.4
Q ss_pred CcEEEEEecCCCch-hhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhcc
Q 015523 17 ALNVLVPVGFGTEE-MEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVRL 95 (405)
Q Consensus 17 ~~ki~ill~~g~~~-~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~~ 95 (405)
++|++|++.+..-. ..+..+.+.|++.++++.+.......... .+. .+.....+|.|++.|| .
T Consensus 29 ~~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~~~~~~-----~~~-----~~~~~~~~d~vvv~GG-D----- 92 (332)
T 2bon_A 29 FPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAA-----RYV-----EEARKFGVATVIAGGG-D----- 92 (332)
T ss_dssp -CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHHH-----HHH-----HHHHHHTCSEEEEEES-H-----
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecCcchHH-----HHH-----HHHHhcCCCEEEEEcc-c-----
Confidence 56899998764322 33456778888889988877544221110 000 0111125899999999 2
Q ss_pred ccChHHHHHHHHHH----HcCCEEEEEc--cchHHhhhhcCCC
Q 015523 96 RDCEILKKITSKQA----EEKRLYGAIC--AAPAVTLLPWGLL 132 (405)
Q Consensus 96 ~~~~~~~~~l~~~~----~~~~~i~aic--~g~~~~La~agll 132 (405)
..+.+.++... ....+++.+- ++.. +....|+.
T Consensus 93 ---GTl~~v~~~l~~~~~~~~~plgiiP~Gt~N~-fa~~l~i~ 131 (332)
T 2bon_A 93 ---GTINEVSTALIQCEGDDIPALGILPLGTAND-FATSVGIP 131 (332)
T ss_dssp ---HHHHHHHHHHHHCCSSCCCEEEEEECSSSCH-HHHHTTCC
T ss_pred ---hHHHHHHHHHhhcccCCCCeEEEecCcCHHH-HHHhcCCC
Confidence 34555555555 4566877773 3232 23345543
No 231
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=26.11 E-value=55 Score=29.14 Aligned_cols=87 Identities=13% Similarity=0.032 Sum_probs=53.8
Q ss_pred CcEEEEEecC---CCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh
Q 015523 17 ALNVLVPVGF---GTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV 93 (405)
Q Consensus 17 ~~ki~ill~~---g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~ 93 (405)
.++|++++.+ .|...-+.++.+.+++.|+++.+...+.. +-.-. ..++.+-...+|++|+.+..
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~~--------~~i~~~~~~~vdgiIi~~~~---- 69 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDD-IPNQL--------SQIENMVTKGVKVLVIASID---- 69 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHHHH--------HHHHHHHHHTCSEEEECCSS----
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCC-HHHHH--------HHHHHHHHcCCCEEEEEcCC----
Confidence 5689999865 34455566777788888999988875543 11000 01111111358999987641
Q ss_pred ccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 94 RLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
.......+++..+.+.|++.+..
T Consensus 70 ----~~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 70 ----GTTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp ----GGGGHHHHHHHHHTTCEEEEESS
T ss_pred ----chhHHHHHHHHHHCCCCEEEECC
Confidence 12334456667788999998876
No 232
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=25.97 E-value=65 Score=28.78 Aligned_cols=87 Identities=14% Similarity=0.045 Sum_probs=44.7
Q ss_pred CCcCEEEEEeCCCCcHH---HHHHHHHHHHhC-CCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCcc
Q 015523 218 DRMPRVLIPIANGSEEI---EIVTIVDILRRA-KVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVA 293 (405)
Q Consensus 218 ~~~~~V~il~~~g~~~~---e~~~~~~~l~~~-~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~ 293 (405)
.+..+|++++.+ .++. -+.++.+.+.+. ||++.+...... +-.. ...++.+....+|++|+.+..
T Consensus 4 ~~~~~Igvi~~~-~~~~~~~~~~gi~~~a~~~~g~~l~i~~~~~~-~~~~--------~~~i~~l~~~~vdgiIi~~~~- 72 (325)
T 2x7x_A 4 TPHFRIGVAQCS-DDSWRHKMNDEILREAMFYNGVSVEIRSAGDD-NSKQ--------AEDVHYFMDEGVDLLIISANE- 72 (325)
T ss_dssp --CCEEEEEESC-CSHHHHHHHHHHHHHHTTSSSCEEEEEECTTC-HHHH--------HHHHHHHHHTTCSEEEECCSS-
T ss_pred CCCeEEEEEecC-CCHHHHHHHHHHHHHHHHcCCcEEEEeCCCCC-HHHH--------HHHHHHHHHcCCCEEEEeCCC-
Confidence 456899999987 3322 223455566677 898887755432 1000 001222222568999987542
Q ss_pred chHhhhcChHHHHHHHHHhhcCCEEEEEc
Q 015523 294 GAERLQKSRILKKLLKEQKVAGRIYGAVC 322 (405)
Q Consensus 294 ~~~~~~~~~~l~~~l~~~~~~~k~i~aic 322 (405)
.. .+...++.+.+.+.|++.+.
T Consensus 73 -~~------~~~~~~~~~~~~~iPvV~~~ 94 (325)
T 2x7x_A 73 -AA------PMTPIVEEAYQKGIPVILVD 94 (325)
T ss_dssp -HH------HHHHHHHHHHHTTCCEEEES
T ss_pred -HH------HHHHHHHHHHHCCCeEEEeC
Confidence 11 12233444445566666554
No 233
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=25.86 E-value=39 Score=29.14 Aligned_cols=100 Identities=9% Similarity=0.054 Sum_probs=52.1
Q ss_pred CcEEEEEecC----CCchhhHHHHHHHHHhc-CCEEEEEecCCCceeEe---c------cCcEEec--Cc---ccCCCCC
Q 015523 17 ALNVLVPVGF----GTEEMEAVIIVDVLRRA-GAQVTMASVEPQLEVEA---S------SGTRLVA--DT---SISNCSH 77 (405)
Q Consensus 17 ~~ki~ill~~----g~~~~e~~~~~~~l~~~-~~~v~~vs~~~~~~v~~---~------~g~~v~~--~~---~~~~~~~ 77 (405)
||||.++... +.+..=+..+.+.+.+. |.+++++....- ++.- . .|..... +. -.+++
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~~~-~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l-- 77 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNS-ELEISNSDSEELFKKGIDRQSNADDGGVIKKEL-- 77 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECTTTC-CCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHH--
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEcccC-CCCCCCchHHhhccCCCCccchHHHHHHHHHHH--
Confidence 3588888755 34444445556677776 899999987653 2211 1 0100000 00 00111
Q ss_pred CcccEEEEcCCchhhhccccChHHHHHHHHHH-------HcCCEEEEEccch
Q 015523 78 QVFDLIALPGGMPGSVRLRDCEILKKITSKQA-------EEKRLYGAICAAP 122 (405)
Q Consensus 78 ~~~d~liipgg~~~~~~~~~~~~~~~~l~~~~-------~~~~~i~aic~g~ 122 (405)
.++|+||+-.= .....-...+..||-+.. -.+|+++.++++|
T Consensus 78 ~~AD~iI~~sP---~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g 126 (242)
T 1sqs_A 78 LESDIIIISSP---VYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAE 126 (242)
T ss_dssp HHCSEEEEEEE---ECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEES
T ss_pred HHCCEEEEEcc---ccccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCC
Confidence 35899988431 111223455666666542 3578887777654
No 234
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=25.77 E-value=4.1e+02 Score=24.74 Aligned_cols=142 Identities=11% Similarity=0.081 Sum_probs=74.7
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhh
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQ 299 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~ 299 (405)
.+|+.|+.-++....-.-.+.+.|..+|+++.++...++++-.+...+.--.+ .+.+...+.-|.||-.||- ..
T Consensus 62 ~~rvlIVtd~~v~~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~-~l~~~~~~R~d~IIAvGGG-sv---- 135 (390)
T 3okf_A 62 KQKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMS-FLLEHNYSRDVVVIALGGG-VI---- 135 (390)
T ss_dssp TCEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHH-HHHHTTCCTTCEEEEEESH-HH----
T ss_pred CCEEEEEECCcHHHHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHH-HHHhcCCCcCcEEEEECCc-HH----
Confidence 46888888777776655667788888899988765544412222110000000 1111122334788877762 11
Q ss_pred cChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhcCcccCCcEEEcCCeEecCCh
Q 015523 300 KSRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTNEVVNGTKVVVDGKVITSRGL 371 (405)
Q Consensus 300 ~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~~~~~~~~~v~dg~iiTa~g~ 371 (405)
-++-.++...+..|.+++.|-+-......++. |-+...+......+.........++.|=.++.+-..
T Consensus 136 --~D~ak~~Aa~~~rgip~I~IPTTlla~vDssv--ggkt~I~~~~~Kn~ig~f~~P~~ViiD~~~l~tlP~ 203 (390)
T 3okf_A 136 --GDLVGFAAACYQRGVDFIQIPTTLLSQVDSSV--GGKTAVNHPLGKNMIGAFYQPKAVVIDTDCLTTLPA 203 (390)
T ss_dssp --HHHHHHHHHHBTTCCEEEEEECSHHHHHHTSS--SCEEEEEETTEEEEEEEECCCSEEEEEGGGGGGSCH
T ss_pred --hhHHHHHHHHhcCCCCEEEeCCCCccccccCc--CCeEEEEcCCCceEEeeccCCCEEEEcHHHHhhCCH
Confidence 24445555557889999999887643333332 323332221111122233455667777766555433
No 235
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=25.52 E-value=43 Score=29.38 Aligned_cols=38 Identities=26% Similarity=0.356 Sum_probs=33.8
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCC
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERS 258 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~ 258 (405)
|+||+|--=||...--+..+.+.|.+.+ +|.+++|+..
T Consensus 1 Mp~ILlTNDDGi~apGi~~L~~~l~~~g-~V~VvAP~~~ 38 (251)
T 2wqk_A 1 MPTFLLVNDDGYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp -CEEEEECSSCTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHhCC-CEEEEeeCCC
Confidence 6889988889999999999999999988 8999999976
No 236
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=25.11 E-value=2e+02 Score=24.74 Aligned_cols=66 Identities=15% Similarity=0.077 Sum_probs=40.5
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeE--eccCcEE-ecCcccCCCCCCcccEEEEcCCc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVE--ASSGTRL-VADTSISNCSHQVFDLIALPGGM 89 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~--~~~g~~v-~~~~~~~~~~~~~~d~liipgg~ 89 (405)
+|||.|.=. ||-...+ ...|.+.|++|..++.+.. ... ...+..+ ..|. .+....++|+||-..+.
T Consensus 5 ~~~ilVtGa-G~iG~~l---~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~D~--~d~~~~~~d~vi~~a~~ 73 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVL---SRALAPQGWRIIGTSRNPD-QMEAIRASGAEPLLWPG--EEPSLDGVTHLLISTAP 73 (286)
T ss_dssp CCEEEEETC-CHHHHHH---HHHHGGGTCEEEEEESCGG-GHHHHHHTTEEEEESSS--SCCCCTTCCEEEECCCC
T ss_pred cCcEEEECC-cHHHHHH---HHHHHHCCCEEEEEEcChh-hhhhHhhCCCeEEEecc--cccccCCCCEEEECCCc
Confidence 468888865 7776665 6677778999998887653 211 1133332 2222 22223478999998873
No 237
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=24.79 E-value=3.2e+02 Score=23.16 Aligned_cols=81 Identities=10% Similarity=-0.208 Sum_probs=48.4
Q ss_pred CCCCcEEEEEecC---CCchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCch
Q 015523 14 PSFALNVLVPVGF---GTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMP 90 (405)
Q Consensus 14 ~~~~~ki~ill~~---g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~ 90 (405)
..+..+|++++.+ .|...-+.++.+.+++.|+++.+...+.. +-. . ... .+|++|+.+..
T Consensus 5 ~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~---------~---~~~---~vdgiI~~~~~- 67 (277)
T 3cs3_A 5 RRQTNIIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGKKS-HLF---------I---PEK---MVDGAIILDWT- 67 (277)
T ss_dssp CCCCCEEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEEESTTT-TTC---------C---CTT---TCSEEEEECTT-
T ss_pred ccCCcEEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEEeCCCC-HHH---------H---hhc---cccEEEEecCC-
Confidence 3456789999854 34455566777778888999988765443 100 0 011 58999886641
Q ss_pred hhhccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 91 GSVRLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
. +... +.+..+.+.|++.+..
T Consensus 68 -~-----~~~~---~~~l~~~~iPvV~~~~ 88 (277)
T 3cs3_A 68 -F-----PTKE---IEKFAERGHSIVVLDR 88 (277)
T ss_dssp -S-----CHHH---HHHHHHTTCEEEESSS
T ss_pred -C-----CHHH---HHHHHhcCCCEEEEec
Confidence 1 1222 3334456888876644
No 238
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=24.61 E-value=32 Score=27.80 Aligned_cols=93 Identities=13% Similarity=0.107 Sum_probs=53.2
Q ss_pred cCEEEEEeCCCCcHHHHHHHHHHHHhCCCe--EEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccch--
Q 015523 220 MPRVLIPIANGSEEIEIVTIVDILRRAKVD--VVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGA-- 295 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~~~~~l~~~~~~--v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~-- 295 (405)
+.||+|+...-....=+.++.+.|.+.|.. +.++..-| ..-+.+.... +.+ ..+||++|..|-.+++
T Consensus 2 ~~ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VPG------afEiP~aak~-la~--~~~yDavIaLG~VG~T~H 72 (156)
T 2b99_A 2 TKKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPG------IKDLPVACKK-LLE--EEGCDIVMALGMPGKAEK 72 (156)
T ss_dssp CCEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESS------GGGHHHHHHH-HHH--HSCCSEEEEEECCCSSHH
T ss_pred CcEEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECCc------HHHHHHHHHH-HHh--cCCCCEEEEecccCCcch
Confidence 468999986533344457888999998853 33333333 1111111111 111 1579999977644223
Q ss_pred HhhhcChHHHHHHHHHhhcCCEEEEE
Q 015523 296 ERLQKSRILKKLLKEQKVAGRIYGAV 321 (405)
Q Consensus 296 ~~~~~~~~l~~~l~~~~~~~k~i~ai 321 (405)
..+..+.....+.+-....+.||+.-
T Consensus 73 fd~Va~~vs~Gl~~v~L~~~vPV~~g 98 (156)
T 2b99_A 73 DKVCAHEASLGLMLAQLMTNKHIIEV 98 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHHHHHHHHHHhhhCCCEEEE
Confidence 33445556666666667888888764
No 239
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=24.06 E-value=70 Score=27.80 Aligned_cols=90 Identities=8% Similarity=-0.027 Sum_probs=49.7
Q ss_pred cCEEEEEeCCC---CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchH
Q 015523 220 MPRVLIPIANG---SEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAE 296 (405)
Q Consensus 220 ~~~V~il~~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~ 296 (405)
.++|++++.+- |...-+.++.+.+.+.||++.+...... .-.. ...++.+....+|++|+.+....
T Consensus 15 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~~~~l~~~~vdgiIi~~~~~~-- 83 (298)
T 3tb6_A 15 NKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNN-PDNE--------RRGLENLLSQHIDGLIVEPTKSA-- 83 (298)
T ss_dssp CCEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTC-HHHH--------HHHHHHHHHTCCSEEEECCSSTT--
T ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC-hHHH--------HHHHHHHHHCCCCEEEEeccccc--
Confidence 37999998763 4455566777888889999998876543 1100 01111112256788887654210
Q ss_pred hhhcChHHHHHHHHHhhcCCEEEEEch
Q 015523 297 RLQKSRILKKLLKEQKVAGRIYGAVCS 323 (405)
Q Consensus 297 ~~~~~~~l~~~l~~~~~~~k~i~aic~ 323 (405)
. .....+.++++.+.+.+++.+..
T Consensus 84 ~---~~~~~~~~~~~~~~~iPvV~~~~ 107 (298)
T 3tb6_A 84 L---QTPNIGYYLNLEKNGIPFAMINA 107 (298)
T ss_dssp S---CCTTHHHHHHHHHTTCCEEEESS
T ss_pred c---cCCcHHHHHHHHhcCCCEEEEec
Confidence 0 00112334444556667766653
No 240
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=23.90 E-value=83 Score=25.47 Aligned_cols=92 Identities=11% Similarity=0.046 Sum_probs=56.2
Q ss_pred CcCEEEEEeCCCC---cHHHHHHHHHHHHhCCC-eEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcC----
Q 015523 219 RMPRVLIPIANGS---EEIEIVTIVDILRRAKV-DVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPG---- 290 (405)
Q Consensus 219 ~~~~V~il~~~g~---~~~e~~~~~~~l~~~~~-~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpg---- 290 (405)
...||+|+...-. .+.=+.++.+.|.+.|. +++++..-|- .-+.+... .+. ..||+++..|
T Consensus 16 ~~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGa------fEiP~aak-~la----~~yDavIaLG~VIr 84 (160)
T 2c92_A 16 SGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGA------IEIPVVAQ-ELA----RNHDAVVALGVVIR 84 (160)
T ss_dssp TTCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSG------GGHHHHHH-HHH----TSCSEEEEEEEEEC
T ss_pred CCCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcH------HHHHHHHH-HHH----hcCCEEEEEeeeec
Confidence 4578999997643 33667788999999987 5666654441 11111111 111 2499998665
Q ss_pred CccchHhhhcChHHHHHHHHHhhcCCEEEEE
Q 015523 291 GVAGAERLQKSRILKKLLKEQKVAGRIYGAV 321 (405)
Q Consensus 291 G~~~~~~~~~~~~l~~~l~~~~~~~k~i~ai 321 (405)
|.-....+..+.....+.+-....+.||+.-
T Consensus 85 G~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~G 115 (160)
T 2c92_A 85 GQTPHFDYVCDAVTQGLTRVSLDSSTPIANG 115 (160)
T ss_dssp CSSTHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCchHHHHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 3223344556666677777677888888753
No 241
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=23.63 E-value=2.7e+02 Score=25.36 Aligned_cols=39 Identities=31% Similarity=0.454 Sum_probs=28.5
Q ss_pred cCEEEEEeCCCCcHHHHHH-----HHHHHHhCCCeEEEEeecCC
Q 015523 220 MPRVLIPIANGSEEIEIVT-----IVDILRRAKVDVVVASVERS 258 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e~~~-----~~~~l~~~~~~v~~vs~~~~ 258 (405)
++||+||.---..+.|++. +++.|.+.+|++..+..+..
T Consensus 3 ~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~~~ 46 (364)
T 3i12_A 3 KLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKA 46 (364)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred ccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEECCC
Confidence 4689999876555566554 66777778899999887753
No 242
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=29.23 E-value=17 Score=30.63 Aligned_cols=103 Identities=10% Similarity=-0.024 Sum_probs=47.6
Q ss_pred CCCcEEEEEecC----CCchhhHHHHHHHHHhcCCEEEEE-ecCCCceeEeccCc-EEecC---cccCCCCCCcccEEEE
Q 015523 15 SFALNVLVPVGF----GTEEMEAVIIVDVLRRAGAQVTMA-SVEPQLEVEASSGT-RLVAD---TSISNCSHQVFDLIAL 85 (405)
Q Consensus 15 ~~~~ki~ill~~----g~~~~e~~~~~~~l~~~~~~v~~v-s~~~~~~v~~~~g~-~v~~~---~~~~~~~~~~~d~lii 85 (405)
..+|||.++... +.+..=+..+.+.+.+ +.+++++ ....- |+.+.... ...++ ...+.+ ...|++|+
T Consensus 4 ~~~mkIliI~gS~r~~s~t~~la~~~~~~~~~-g~~v~~i~dl~~l-p~~~~~~~~~~~~~~~~~~~~~i--~~AD~iIi 79 (199)
T 3s2y_A 4 TSPLHFVTLLGSLRKASFNAAVARALPEIAPE-GIAITPLGSIGTF-PHYSQDVQEEGFPAPVLTMAQQI--ATADAVVI 79 (199)
Confidence 355688888754 2333333334444444 7778777 55432 43221110 00111 112222 36898888
Q ss_pred cCCchhhhccccChHHHHHHHHH---HHcCCEEEEEccc
Q 015523 86 PGGMPGSVRLRDCEILKKITSKQ---AEEKRLYGAICAA 121 (405)
Q Consensus 86 pgg~~~~~~~~~~~~~~~~l~~~---~~~~~~i~aic~g 121 (405)
..=.........-+.+++|+... .-++|+++.++++
T Consensus 80 ~tP~Y~~s~p~~lK~~iD~l~~~~~~~l~gK~v~~v~ts 118 (199)
T 3s2y_A 80 VTPEYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTAS 118 (199)
Confidence 43111111111223455555442 2357888777753
No 243
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=23.44 E-value=31 Score=30.55 Aligned_cols=40 Identities=5% Similarity=-0.090 Sum_probs=26.3
Q ss_pred CCcCEEEEEeCC-----C---CcHHHHHHHHHHHHhCCCeEEEEeecC
Q 015523 218 DRMPRVLIPIAN-----G---SEEIEIVTIVDILRRAKVDVVVASVER 257 (405)
Q Consensus 218 ~~~~~V~il~~~-----g---~~~~e~~~~~~~l~~~~~~v~~vs~~~ 257 (405)
.+..+|++++.+ - |...=+.++.+.+.+.||.+.+.....
T Consensus 20 ~~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 67 (305)
T 3huu_A 20 NKTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTRMTVSEN 67 (305)
T ss_dssp -CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEEECCCSS
T ss_pred CCCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 456899999887 1 233334556667777799988865543
No 244
>1wui_S Periplasmic [NIFE] hydrogenase small subunit; high resolution [NIFE]hydrogenase, oxidoreductase, NI-A state, unready state; HET: NFC; 1.04A {Desulfovibrio vulgaris str} SCOP: e.19.1.1 PDB: 1h2r_S 1ubj_S 1ubh_S 1ubl_S 1ubm_S 1ubo_S 1ubr_S 1ubt_S 1ubu_S 1wuh_S* 1ubk_S* 1wuj_S 1wuk_S 1wul_S 1e3d_A*
Probab=23.35 E-value=62 Score=28.66 Aligned_cols=45 Identities=9% Similarity=0.051 Sum_probs=32.2
Q ss_pred CCCccEEEEcCCccchHh----hhcChHHHHHHHHHhhcCCEEEEEchHH
Q 015523 280 ESVYDLIILPGGVAGAER----LQKSRILKKLLKEQKVAGRIYGAVCSSP 325 (405)
Q Consensus 280 ~~~~D~livpgG~~~~~~----~~~~~~l~~~l~~~~~~~k~i~aic~g~ 325 (405)
+.+ |+++|-|+...... .......+++++++.++.|+|+|+++=+
T Consensus 67 p~~-Dil~VeG~V~~~~~g~~~~~~g~~~l~~~~e~~~~ak~VIAvGsCA 115 (267)
T 1wui_S 67 PHG-FIAVVEGGIPTAANGIYGKVANHTMLDICSRILPKAQAVIAYGTCA 115 (267)
T ss_dssp TTC-EEEEEESBEECGGGGTTBEETTEEHHHHHHHHGGGSSEEEEESHHH
T ss_pred CCC-eEEEEeCCCccCCCcceeecCChHHHHHHHHHhccCCEEEEeeecc
Confidence 356 99999997532110 1113478999999999999999997654
No 245
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=23.20 E-value=2.3e+02 Score=26.03 Aligned_cols=90 Identities=10% Similarity=0.045 Sum_probs=48.9
Q ss_pred CcEEEEEecCCCchhh--HHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhhc
Q 015523 17 ALNVLVPVGFGTEEME--AVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSVR 94 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e--~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~~ 94 (405)
.+|+.|+-+......+ ...+.+.+...+++++++..... . .+....++ .+||.+++.......
T Consensus 252 ~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~~~-~----------~~~~~~~~--~~~d~ii~gsp~~~~-- 316 (402)
T 1e5d_A 252 TNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKAC-H----------HSQIMSEI--SDAGAVIVGSPTHNN-- 316 (402)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETTTS-C----------HHHHHHHH--HTCSEEEEECCCBTT--
T ss_pred CCcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HHCCEEEEECCccCC--
Confidence 4577777665433332 23345566666777777665431 0 00001112 268999997642111
Q ss_pred cccChHHHHHHHHHHH---cCCEEEEEccch
Q 015523 95 LRDCEILKKITSKQAE---EKRLYGAICAAP 122 (405)
Q Consensus 95 ~~~~~~~~~~l~~~~~---~~~~i~aic~g~ 122 (405)
...+.+.+|+.+... ++|.++.+|+.+
T Consensus 317 -~~~~~~~~~l~~l~~~~l~~k~~~~f~t~g 346 (402)
T 1e5d_A 317 -GILPYVAGTLQYIKGLRPQNKIGGAFGSFG 346 (402)
T ss_dssp -BCCHHHHHHHHHHHHTCCCSCEEEEEEEES
T ss_pred -CchHHHHHHHHHhhhcccCCCEEEEEEcCC
Confidence 123457777766544 688888888743
No 246
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=22.94 E-value=71 Score=29.34 Aligned_cols=69 Identities=9% Similarity=-0.124 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHcCCEEEEEccchHHhhhhcCCCCCcceeeccCccccCCCCccccCc-EEEe--CCeE---cCCCcccHH
Q 015523 100 ILKKITSKQAEEKRLYGAICAAPAVTLLPWGLLRRKQITCHPAFTDKLPTFWAVKSN-IHVS--GEVT---TSRGPGTSF 173 (405)
Q Consensus 100 ~~~~~l~~~~~~~~~i~aic~g~~~~La~agll~g~~~t~~~~~~~~l~~~~~~~~~-~v~d--g~ii---T~~g~~~~~ 173 (405)
.+.+++++.+.+...++.||..|..+=.-+.+|++|. .|+. +|+| |+.+ .|+-. .+.
T Consensus 43 ~~~~~~~~~f~~~d~iIfI~A~GIvVR~IAPll~dK~----------------~DPaVvvvDe~G~~vIpLLsGH~-GAN 105 (336)
T 3eeq_A 43 YKDAEIETIWKCYDAIVFVMALEGATRIVCKYAKSKT----------------EDPAIVCIDDKINYVIPLLGGHW-GAN 105 (336)
T ss_dssp GGGCCHHHHTTTCSEEEEESCHHHHHHHHHHHCCCTT----------------TCCEEEEECTTCCEEEEEECTTT-THH
T ss_pred CHHHHHHHHhcCCCeEEEEeChHHHHHHhCchhccCC----------------CCCCEEEEeCCCCEEEEeccCch-hHH
Confidence 4567899999999999999999886666688887765 4544 4444 4443 33333 677
Q ss_pred HHHHHHHHHhcC
Q 015523 174 EFALCLVEQLFG 185 (405)
Q Consensus 174 ~~~l~ii~~~~g 185 (405)
+++..+-+.+.+
T Consensus 106 ~LA~~IA~~lga 117 (336)
T 3eeq_A 106 DIARELSVILNS 117 (336)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhCC
Confidence 777766665533
No 247
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=22.70 E-value=78 Score=27.70 Aligned_cols=62 Identities=15% Similarity=0.140 Sum_probs=44.3
Q ss_pred CcCEEEEEeCCC-CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCc
Q 015523 219 RMPRVLIPIANG-SEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGV 292 (405)
Q Consensus 219 ~~~~V~il~~~g-~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~ 292 (405)
+.++|.+...+| .++.....+...|+..||++...+.+- .++.-.+.+...++|+|.+-+..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~v------------p~e~l~~~~~~~~~d~V~lS~l~ 184 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDV------------PAEEVLAAVQKEKPIMLTGTALM 184 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEEC------------CSHHHHHHHHHHCCSEEEEECCC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC------------CHHHHHHHHHHcCCCEEEEEeec
Confidence 457888888775 689999999999999999999987653 12222222223578999887653
No 248
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=22.66 E-value=88 Score=25.14 Aligned_cols=94 Identities=20% Similarity=0.113 Sum_probs=57.6
Q ss_pred CcCEEEEEeCCCC---cHHHHHHHHHHHHhCCC---eEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcC--
Q 015523 219 RMPRVLIPIANGS---EEIEIVTIVDILRRAKV---DVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPG-- 290 (405)
Q Consensus 219 ~~~~V~il~~~g~---~~~e~~~~~~~l~~~~~---~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpg-- 290 (405)
...||+|+...-. .+.=+.++.+.|.+.|. +++++..-|- .-+.+......+ ..+||+++..|
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGa------fEiP~aa~~la~---~~~yDavIaLG~V 81 (154)
T 1rvv_A 11 TGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGA------FEIPFAAKKMAE---TKKYDAIITLGTV 81 (154)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSG------GGHHHHHHHHHH---TSCCSEEEEEEEE
T ss_pred CCCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHHHHHh---cCCCCEEEEeeee
Confidence 4578999997643 33667788999999984 4677755542 111111111111 25799998665
Q ss_pred --CccchHhhhcChHHHHHHHHHhhcCCEEEEE
Q 015523 291 --GVAGAERLQKSRILKKLLKEQKVAGRIYGAV 321 (405)
Q Consensus 291 --G~~~~~~~~~~~~l~~~l~~~~~~~k~i~ai 321 (405)
|.-....+..+.....+.+-....+.||+.-
T Consensus 82 IrG~T~Hfd~V~~~vs~Gl~~v~l~~~vPV~~G 114 (154)
T 1rvv_A 82 IRGATTHYDYVCNEAAKGIAQAANTTGVPVIFG 114 (154)
T ss_dssp ECCSSSHHHHHHHHHHHHHHHHHHHHCSCEEEE
T ss_pred ecCCchHHHHHHHHHHHHHHHHHhhhCCCEEEE
Confidence 3223444555666667777677888888753
No 249
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=22.44 E-value=97 Score=27.58 Aligned_cols=52 Identities=15% Similarity=0.124 Sum_probs=27.6
Q ss_pred ceEEEEeeccCCCCCcEEEEEecC----CCchhhHHHHHHHHHhcCCEEEEEecCC
Q 015523 3 SVSVTVSSFISPSFALNVLVPVGF----GTEEMEAVIIVDVLRRAGAQVTMASVEP 54 (405)
Q Consensus 3 ~~~~~~~s~~~~~~~~ki~ill~~----g~~~~e~~~~~~~l~~~~~~v~~vs~~~ 54 (405)
|+-+++.+-...+++|||.||... +++..-...+.+.++++|.+|+++-...
T Consensus 8 ~~~~~~~t~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~ 63 (280)
T 4gi5_A 8 SSGVDLGTENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDLYA 63 (280)
T ss_dssp --------------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred ccccccCCCcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 344555555445667899999854 3444445566788888899999987644
No 250
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=22.37 E-value=92 Score=28.81 Aligned_cols=89 Identities=16% Similarity=0.080 Sum_probs=52.7
Q ss_pred cCEEEEEeCCCCcHHH--HHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 220 MPRVLIPIANGSEEIE--IVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 220 ~~~V~il~~~g~~~~e--~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
.++|.|+-+....-.+ .-.+.+.+...++.++++..... . .+...+++ .++|.+++.......
T Consensus 252 ~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~~~-~----------~~~~~~~~--~~~d~ii~gsp~~~~-- 316 (402)
T 1e5d_A 252 TNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKAC-H----------HSQIMSEI--SDAGAVIVGSPTHNN-- 316 (402)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETTTS-C----------HHHHHHHH--HTCSEEEEECCCBTT--
T ss_pred CCcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HHCCEEEEECCccCC--
Confidence 5788888876543333 23455677777888887766532 0 01111223 578999997653221
Q ss_pred hhcChHHHHHHHHHhh---cCCEEEEEchH
Q 015523 298 LQKSRILKKLLKEQKV---AGRIYGAVCSS 324 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~---~~k~i~aic~g 324 (405)
...+.+.+++.+... ++|.++.+|+.
T Consensus 317 -~~~~~~~~~l~~l~~~~l~~k~~~~f~t~ 345 (402)
T 1e5d_A 317 -GILPYVAGTLQYIKGLRPQNKIGGAFGSF 345 (402)
T ss_dssp -BCCHHHHHHHHHHHHTCCCSCEEEEEEEE
T ss_pred -CchHHHHHHHHHhhhcccCCCEEEEEEcC
Confidence 123356666665443 78888888863
No 251
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=22.18 E-value=41 Score=27.66 Aligned_cols=88 Identities=14% Similarity=0.175 Sum_probs=47.0
Q ss_pred cCEEEEEeCCCC-----cHHHHHHHHHHHHhCC--CeEEEEeecCCceeecCCC------cE----Eee---------CC
Q 015523 220 MPRVLIPIANGS-----EEIEIVTIVDILRRAK--VDVVVASVERSTQIVASQG------VK----IIA---------DK 273 (405)
Q Consensus 220 ~~~V~il~~~g~-----~~~e~~~~~~~l~~~~--~~v~~vs~~~~~~v~~~~g------~~----v~~---------~~ 273 (405)
|+||.++...-- ...=.-.+.+.+...+ .+++++.+... .+..-.+ .. ..+ +.
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~-~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 79 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAAN-PVPVLDGELVGAMRPGDAPLTPRQQDALALSDE 79 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTS-CCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCC-CCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHH
Confidence 468888876532 2222234566676655 88998887653 3210000 00 000 01
Q ss_pred CccCcCCCCccEEEEcCCccchHhhhcChHHHHHHHHHhh
Q 015523 274 SISDAAESVYDLIILPGGVAGAERLQKSRILKKLLKEQKV 313 (405)
Q Consensus 274 ~l~~~~~~~~D~livpgG~~~~~~~~~~~~l~~~l~~~~~ 313 (405)
..+++ .++|.||+..- .+...-...+..||.+...
T Consensus 80 ~~~~l--~~aD~iv~~~P---~y~~~~p~~lK~~iD~~~~ 114 (201)
T 1t5b_A 80 LIAEL--KAHDVIVIAAP---MYNFNIPTQLKNYFDLIAR 114 (201)
T ss_dssp HHHHH--HHCSEEEEECC---CBTTBCCHHHHHHHHHHCC
T ss_pred HHHHH--HhCCEEEEEeC---cccCcCCHHHHHHHHHhee
Confidence 12333 57899998653 2233346678888887763
No 252
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=22.11 E-value=4.7e+02 Score=24.09 Aligned_cols=140 Identities=14% Similarity=0.043 Sum_probs=73.1
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhhhc
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERLQK 300 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~~~ 300 (405)
+|+.|+.-++.... ...+.+.|..+|+++.++...++++-.+...+.--.+ .+.+......|.||-.||- ..
T Consensus 44 ~rvlIVtd~~v~~~-~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~-~l~~~~~~r~d~IIavGGG-sv----- 115 (368)
T 3qbe_A 44 HKVAVVHQPGLAET-AEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWE-VLGRIGIGRKDALVSLGGG-AA----- 115 (368)
T ss_dssp SEEEEEECGGGHHH-HHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHH-HHHHHTCCTTCEEEEEESH-HH-----
T ss_pred CEEEEEECccHHHH-HHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHH-HHHHcCCCCCcEEEEECCh-HH-----
Confidence 67777776666554 5667888889999987766554412111110000000 1111122456999877773 11
Q ss_pred ChHHHHHHHHHhhcCCEEEEEchHHHHHHHcCCCCCCeeecCcchhhhhhcCcccCCcEEEcCCeEecCCh
Q 015523 301 SRILKKLLKEQKVAGRIYGAVCSSPIVLHKHGLLKAKKATAHPSVIGKLTNEVVNGTKVVVDGKVITSRGL 371 (405)
Q Consensus 301 ~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~~~t~~~~~~~~l~~~~~~~~~~v~dg~iiTa~g~ 371 (405)
-++-.++...+..|.+++.|-+-......+. -|-+..........+.........++.|=.++.+-..
T Consensus 116 -~D~ak~~Aa~~~rgip~i~IPTTlla~vDss--vggkt~V~~~~~Kn~ig~~~~P~~viiDp~~l~tlP~ 183 (368)
T 3qbe_A 116 -TDVAGFAAATWLRGVSIVHLPTTLLGMVDAA--VGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPR 183 (368)
T ss_dssp -HHHHHHHHHHGGGCCEEEEEECSHHHHHTTT--SSCEEEEEETTEEEEEEEECCCSEEEEEGGGGGGSCH
T ss_pred -HHHHHHHHHHhccCCcEEEECCCCccccccC--cCceEEEECCCCceeeccccCCCEEEEcHHHHhhCCH
Confidence 2444555556778999999988654332222 2323222221111122233455667777665555433
No 253
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=22.07 E-value=98 Score=24.94 Aligned_cols=94 Identities=15% Similarity=0.101 Sum_probs=56.4
Q ss_pred CEEEEEeCCCC---cHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccC--cCCCCccEEEEcC----C
Q 015523 221 PRVLIPIANGS---EEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISD--AAESVYDLIILPG----G 291 (405)
Q Consensus 221 ~~V~il~~~g~---~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~--~~~~~~D~livpg----G 291 (405)
.||+|+...-. .+.-+.++.+.|.+.|.+++++..-|- .. +.+......+. ....+||+++..| |
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGa--fE----iP~aa~~la~~~~~~~~~yDavIaLG~VIrG 86 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGA--LE----IPATISFALDGADNGGTEYDGFVALGTVIRG 86 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSG--GG----HHHHHHHHHHHHHTTCCCCSEEEEEEEEECC
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--HH----HHHHHHHHHhhccccCCCCCEEEEeeeeecC
Confidence 78999997643 346678889999999988887766552 11 11111111110 0125799998665 3
Q ss_pred ccchHhhhcChHHHHHHHHHhhcCCEEEE
Q 015523 292 VAGAERLQKSRILKKLLKEQKVAGRIYGA 320 (405)
Q Consensus 292 ~~~~~~~~~~~~l~~~l~~~~~~~k~i~a 320 (405)
.-....+..+.-...+.+-..+.+.||+.
T Consensus 87 ~T~Hfd~Va~~v~~gl~~vsl~~~vPV~~ 115 (157)
T 2i0f_A 87 ETYHFDIVSNESCRALTDLSVEESIAIGN 115 (157)
T ss_dssp SSSTTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 21334445556666666667788888764
No 254
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=21.93 E-value=55 Score=26.12 Aligned_cols=84 Identities=11% Similarity=0.107 Sum_probs=40.5
Q ss_pred CEEEEEeCCCCcHHH-H-HHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHhh
Q 015523 221 PRVLIPIANGSEEIE-I-VTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAERL 298 (405)
Q Consensus 221 ~~V~il~~~g~~~~e-~-~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~~ 298 (405)
+||.|+-+...--.+ + -.+.+.+... +.++++....- ..+++ .+||.+++.........
T Consensus 1 ~kilIvY~S~tGnT~~vA~~ia~~l~~~-~~v~~~~~~~~---------------~~~~l--~~~d~ii~g~pty~~g~- 61 (169)
T 1czn_A 1 AKIGLFYGTQTGVTQTIAESIQQEFGGE-SIVDLNDIANA---------------DASDL--NAYDYLIIGCPTWNVGE- 61 (169)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHTST-TTEEEEEGGGC---------------CGGGG--GGCSEEEEECCEETTTE-
T ss_pred CeEEEEEECCCcHHHHHHHHHHHHhCcc-cceEEEEhhhC---------------CHhHH--hhCCEEEEEecccCCCc-
Confidence 356777665442222 2 2233334332 45666654431 12334 67999988653211011
Q ss_pred hcChHHHHHHH---HHhhcCCEEEEEchH
Q 015523 299 QKSRILKKLLK---EQKVAGRIYGAVCSS 324 (405)
Q Consensus 299 ~~~~~l~~~l~---~~~~~~k~i~aic~g 324 (405)
-.+.+.+++. +..-++|+++.+|+|
T Consensus 62 -~p~~~~~f~~~l~~~~l~gk~~~~f~t~ 89 (169)
T 1czn_A 62 -LQSDWEGIYDDLDSVNFQGKKVAYFGAG 89 (169)
T ss_dssp -ECHHHHHHGGGGGGSCCTTCEEEEEEEC
T ss_pred -CCHHHHHHHHHhhhhccCCCEEEEEEEC
Confidence 1223334443 223467888888754
No 255
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=21.78 E-value=1.8e+02 Score=24.93 Aligned_cols=65 Identities=9% Similarity=0.033 Sum_probs=39.6
Q ss_pred CCcCEEEEEeC-C---CCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCC
Q 015523 218 DRMPRVLIPIA-N---GSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGG 291 (405)
Q Consensus 218 ~~~~~V~il~~-~---g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG 291 (405)
++..+|++++. + .|...-+.++.+.+.+.||.+.+...... .-. ....++.+....+|++|+.+.
T Consensus 9 ~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~--------~~~~~~~l~~~~vdgiIi~~~ 77 (289)
T 3g85_A 9 QSKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVICPYK-TDC--------LHLEKGISKENSFDAAIIANI 77 (289)
T ss_dssp --CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSEEEEEEEC-TTC--------GGGCGGGSTTTCCSEEEESSC
T ss_pred CCCceEEEEeccccchHHHHHHHHHHHHHHHHcCCeEEEEecCCC-chh--------HHHHHHHHhccCCCEEEEecC
Confidence 45689999997 3 24445566677788888998877654432 100 112334444467899998764
No 256
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=21.71 E-value=3.7e+02 Score=22.74 Aligned_cols=41 Identities=12% Similarity=-0.003 Sum_probs=29.2
Q ss_pred cCCcCEEEEEeCC---CCcHHHHHHHHHHHHhCCCeEEEEeecC
Q 015523 217 FDRMPRVLIPIAN---GSEEIEIVTIVDILRRAKVDVVVASVER 257 (405)
Q Consensus 217 ~~~~~~V~il~~~---g~~~~e~~~~~~~l~~~~~~v~~vs~~~ 257 (405)
..+..+|++++.+ .|...-+.++.+.+.+.||.+.+.....
T Consensus 5 ~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 48 (277)
T 3cs3_A 5 RRQTNIIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGKK 48 (277)
T ss_dssp CCCCCEEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEEESTT
T ss_pred ccCCcEEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3456899999865 3444555677778888899998876544
No 257
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=21.55 E-value=60 Score=28.22 Aligned_cols=87 Identities=8% Similarity=-0.072 Sum_probs=47.8
Q ss_pred CcEEEEEecCC---CchhhHHHHHHHHHhcCCEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh
Q 015523 17 ALNVLVPVGFG---TEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV 93 (405)
Q Consensus 17 ~~ki~ill~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~ 93 (405)
+++|++++.+- |...-+.++.+.+++.|+++.+...... +-... ..++.+....+|++|+.+.. .
T Consensus 2 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~-~~~~~--------~~~~~l~~~~vdgiI~~~~~--~- 69 (290)
T 2fn9_A 2 KGKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQND-TAKES--------AHFDAIIAAGYDAIIFNPTD--A- 69 (290)
T ss_dssp -CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHHHH--------HHHHHHHHTTCSEEEECCSC--T-
T ss_pred ceEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCCCCC-HHHHH--------HHHHHHHHcCCCEEEEecCC--h-
Confidence 35899998652 3344455666777788999887765432 10000 00111111358999987641 1
Q ss_pred ccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 94 RLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
......+++..+.+.|++.+..
T Consensus 70 -----~~~~~~~~~~~~~~iPvV~~~~ 91 (290)
T 2fn9_A 70 -----DGSIANVKRAKEAGIPVFCVDR 91 (290)
T ss_dssp -----TTTHHHHHHHHHTTCCEEEESS
T ss_pred -----HHHHHHHHHHHHCCCeEEEEec
Confidence 1122334445567888887765
No 258
>3dmn_A Putative DNA helicase; APC89291.2, lactobacillus plantarum WCFS1, STR genomics, PSI-2, midwest center for structural genomics; HET: MSE; 1.66A {Lactobacillus plantarum}
Probab=21.30 E-value=1.6e+02 Score=23.60 Aligned_cols=61 Identities=15% Similarity=0.124 Sum_probs=0.0
Q ss_pred CEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcC
Q 015523 221 PRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPG 290 (405)
Q Consensus 221 ~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpg 290 (405)
..|+||...+ .+...+.+.|...|..+..+..+.. ....++.+.+-+..... +||.|++++
T Consensus 62 ~~iAVL~r~~---~~~~~l~~~L~~~gi~~~~l~~~~~---~~~~~v~v~t~~~~KGl---Ef~~V~~~~ 122 (174)
T 3dmn_A 62 DTTAIIGKSL---AECEALTKALKARGEQVTLIQTENQ---RLAPGVIVVPSFLAKGL---EFDAVIVWN 122 (174)
T ss_dssp CCEEEEESSH---HHHHHHHHHHHTTTCCEEECSSCC----CCCSSEEEEEGGGCTTC---CEEEEEEET
T ss_pred CcEEEEecCH---HHHHHHHHHHHHcCCcceeeccccc---ccCCCeEEEEccccCCc---CCCEEEEec
No 259
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=21.30 E-value=2.5e+02 Score=20.58 Aligned_cols=82 Identities=7% Similarity=-0.173 Sum_probs=40.7
Q ss_pred CCCcEEEEEecCCCchhhHHHHHHHHHhcC-CEEEEEecCCCceeEeccCcEEecCcccCCCCCCcccEEEEcCCchhhh
Q 015523 15 SFALNVLVPVGFGTEEMEAVIIVDVLRRAG-AQVTMASVEPQLEVEASSGTRLVADTSISNCSHQVFDLIALPGGMPGSV 93 (405)
Q Consensus 15 ~~~~ki~ill~~g~~~~e~~~~~~~l~~~~-~~v~~vs~~~~~~v~~~~g~~v~~~~~~~~~~~~~~d~liipgg~~~~~ 93 (405)
.+++||.|+ ++ +......+...|+..+ |++..+..... .+..+....+|++++=-..++.
T Consensus 12 ~~~~~iliv--dd-~~~~~~~l~~~L~~~g~~~v~~~~~~~~---------------a~~~l~~~~~dlvi~D~~l~~~- 72 (135)
T 3snk_A 12 TKRKQVALF--SS-DPNFKRDVATRLDALAIYDVRVSETDDF---------------LKGPPADTRPGIVILDLGGGDL- 72 (135)
T ss_dssp -CCEEEEEE--CS-CHHHHHHHHHHHHHTSSEEEEEECGGGG---------------GGCCCTTCCCSEEEEEEETTGG-
T ss_pred CCCcEEEEE--cC-CHHHHHHHHHHHhhcCCeEEEEeccHHH---------------HHHHHhccCCCEEEEeCCCCCc-
Confidence 344566554 32 2333455677888888 88875443221 1112222358988883221111
Q ss_pred ccccChHHHHHHHHHHHcCCEEEEEc
Q 015523 94 RLRDCEILKKITSKQAEEKRLYGAIC 119 (405)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~aic 119 (405)
+.-++.+.|++... ..+|..++
T Consensus 73 ---~g~~~~~~l~~~~~-~~~ii~~s 94 (135)
T 3snk_A 73 ---LGKPGIVEARALWA-TVPLIAVS 94 (135)
T ss_dssp ---GGSTTHHHHHGGGT-TCCEEEEE
T ss_pred ---hHHHHHHHHHhhCC-CCcEEEEe
Confidence 12355666776554 34444443
No 260
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=20.95 E-value=71 Score=27.53 Aligned_cols=62 Identities=5% Similarity=-0.049 Sum_probs=35.6
Q ss_pred CEEEEEeCCC---CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCC
Q 015523 221 PRVLIPIANG---SEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGG 291 (405)
Q Consensus 221 ~~V~il~~~g---~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG 291 (405)
++|++++.+- |...-+.++.+.+.+.||++.+...... .-. ....++.+.....|++|+.+.
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~-~~~--------~~~~i~~l~~~~vdgiIi~~~ 66 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNN-PAK--------ELANVQDLTVRGTKILLINPT 66 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTC-HHH--------HHHHHHHHTTTTEEEEEECCS
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcCcEEEEeCCCCC-HHH--------HHHHHHHHHHcCCCEEEEeCC
Confidence 5789998763 2333344556677777999988765432 100 001122233357899998653
No 261
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=20.05 E-value=4.7e+02 Score=23.34 Aligned_cols=100 Identities=15% Similarity=0.063 Sum_probs=62.1
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHhcCCEEEEEecCCCceeEe----------ccCcEEecCcccCCCCCCcccEEEEc
Q 015523 17 ALNVLVPVGFGTEEMEAVIIVDVLRRAGAQVTMASVEPQLEVEA----------SSGTRLVADTSISNCSHQVFDLIALP 86 (405)
Q Consensus 17 ~~ki~ill~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~----------~~g~~v~~~~~~~~~~~~~~d~liip 86 (405)
..+|.||+-+|=+..+-..+...|...|++|.++-+... .... ..|..+.+.. ...+...+|+||=-
T Consensus 132 ~~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~-~~~~~a~~~~~~~~~~g~~~~~~~--~~l~~~~~dlIIDA 208 (306)
T 3d3j_A 132 RPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFV-KMLESITNELSLFSKTQGQQVSSL--KDLPTSPVDLVINC 208 (306)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCS-SCCHHHHHHHHHHHTSSCEEESCS--TTSCSSCCSEEEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCC-CCCHHHHHHHHHHHHcCCccccch--hhhccCCCCEEEEC
Confidence 358999999999999999999999999999999866532 1111 1344443211 11210134443311
Q ss_pred -CCchhhhccccChHHHHHHHHHHHcCCEEEEEcc
Q 015523 87 -GGMPGSVRLRDCEILKKITSKQAEEKRLYGAICA 120 (405)
Q Consensus 87 -gg~~~~~~~~~~~~~~~~l~~~~~~~~~i~aic~ 120 (405)
|. .....+.+.+.+.++|....+.+.+|.|+--
T Consensus 209 LG~-G~~~~l~~~~~~~~lI~~iN~~~~~VvAVDi 242 (306)
T 3d3j_A 209 LDC-PENVFLRDQPWYKAAVAWANQNRAPVLSIDP 242 (306)
T ss_dssp CCC-TTCGGGGGCHHHHHHHHHHHHSCCCEEEESC
T ss_pred CCC-CCCCccCcchHHHHHHHHHHhcCCCEEEEEC
Confidence 32 2223333235777777777778899999865
No 262
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=20.05 E-value=1.4e+02 Score=23.89 Aligned_cols=39 Identities=18% Similarity=0.263 Sum_probs=31.0
Q ss_pred CCcEEEEEecCCCchhh--HHHHHHHHHhcCCEEEEEecCC
Q 015523 16 FALNVLVPVGFGTEEME--AVIIVDVLRRAGAQVTMASVEP 54 (405)
Q Consensus 16 ~~~ki~ill~~g~~~~e--~~~~~~~l~~~~~~v~~vs~~~ 54 (405)
...|+.||+.||..... .....+.+++.+..+..++...
T Consensus 121 ~~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~ 161 (178)
T 2xgg_A 121 HVPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGH 161 (178)
T ss_dssp TSCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC-
T ss_pred CCCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCC
Confidence 34689999999977655 7777888888899999888755
No 263
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=20.04 E-value=1.9e+02 Score=21.32 Aligned_cols=78 Identities=14% Similarity=0.012 Sum_probs=40.4
Q ss_pred CCcCEEEEEeCCCCcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEEcCCccchHh
Q 015523 218 DRMPRVLIPIANGSEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIILPGGVAGAER 297 (405)
Q Consensus 218 ~~~~~V~il~~~g~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpgG~~~~~~ 297 (405)
..+++|.|+-- +......+...|...|+.+..++.... .+..+....+|++++|+.
T Consensus 16 ~~~~~ilivdd---~~~~~~~l~~~L~~~g~~v~~~~~~~~---------------al~~l~~~~~dlvi~~~~------ 71 (137)
T 2pln_A 16 RGSMRVLLIEK---NSVLGGEIEKGLNVKGFMADVTESLED---------------GEYLMDIRNYDLVMVSDK------ 71 (137)
T ss_dssp TTCSEEEEECS---CHHHHHHHHHHHHHTTCEEEEESCHHH---------------HHHHHHHSCCSEEEECST------
T ss_pred CCCCeEEEEeC---CHHHHHHHHHHHHHcCcEEEEeCCHHH---------------HHHHHHcCCCCEEEEcCc------
Confidence 34567666532 233334566777778888774432221 111111135898884432
Q ss_pred hhcChHHHHHHHHHhhcCCEEEEEc
Q 015523 298 LQKSRILKKLLKEQKVAGRIYGAVC 322 (405)
Q Consensus 298 ~~~~~~l~~~l~~~~~~~k~i~aic 322 (405)
..-++++.|++. ....+|+.+.
T Consensus 72 --~g~~~~~~l~~~-~~~~~ii~ls 93 (137)
T 2pln_A 72 --NALSFVSRIKEK-HSSIVVLVSS 93 (137)
T ss_dssp --THHHHHHHHHHH-STTSEEEEEE
T ss_pred --cHHHHHHHHHhc-CCCccEEEEe
Confidence 123667777766 3155555554
No 264
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=20.02 E-value=37 Score=28.97 Aligned_cols=79 Identities=15% Similarity=0.217 Sum_probs=50.5
Q ss_pred CcCEEEEEeCCC-CcHHHHHHHHHHHHhCCCeEEEEeecCCceeecCCCcEEeeCCCccCcCCCCccEEEE--cCCccch
Q 015523 219 RMPRVLIPIANG-SEEIEIVTIVDILRRAKVDVVVASVERSTQIVASQGVKIIADKSISDAAESVYDLIIL--PGGVAGA 295 (405)
Q Consensus 219 ~~~~V~il~~~g-~~~~e~~~~~~~l~~~~~~v~~vs~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~liv--pgG~~~~ 295 (405)
...||.+.+.+| .++.....+...|+..||++...+.+- .++.-.+.+...++|+|.+ -+.. .
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~v------------p~e~iv~~~~~~~~d~v~l~~S~l~--~ 156 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDV------------LNENVVEEAAKHKGEKVLLVGSALM--T 156 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSC------------CHHHHHHHHHHTTTSCEEEEEECSS--H
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCC------------CHHHHHHHHHHcCCCEEEEEchhcc--c
Confidence 346888888775 689999999999999999999876553 2222223333367899999 4432 3
Q ss_pred HhhhcChHHHHHHHHH
Q 015523 296 ERLQKSRILKKLLKEQ 311 (405)
Q Consensus 296 ~~~~~~~~l~~~l~~~ 311 (405)
..+..-+++++.|++.
T Consensus 157 ~~~~~~~~~i~~l~~~ 172 (215)
T 3ezx_A 157 TSMLGQKDLMDRLNEE 172 (215)
T ss_dssp HHHTHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHc
Confidence 3333334455555443
Done!