Query 015527
Match_columns 405
No_of_seqs 291 out of 3459
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 14:10:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015527.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015527hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f8u_A Protein disulfide-isome 100.0 7.7E-49 2.6E-53 377.6 32.6 337 57-402 2-368 (481)
2 3us3_A Calsequestrin-1; calciu 100.0 1.9E-48 6.5E-53 360.2 33.2 315 54-377 11-351 (367)
3 2r2j_A Thioredoxin domain-cont 100.0 4.1E-49 1.4E-53 367.3 26.2 322 56-388 5-345 (382)
4 1sji_A Calsequestrin 2, calseq 100.0 3.3E-47 1.1E-51 350.6 34.0 314 54-377 9-349 (350)
5 2b5e_A Protein disulfide-isome 100.0 7.9E-46 2.7E-50 358.4 25.0 333 53-402 11-374 (504)
6 3apo_A DNAJ homolog subfamily 100.0 1.1E-35 3.9E-40 301.9 33.2 315 54-380 114-549 (780)
7 3apo_A DNAJ homolog subfamily 100.0 4.1E-34 1.4E-38 290.5 32.1 308 56-375 440-768 (780)
8 3ed3_A Protein disulfide-isome 100.0 4.6E-32 1.6E-36 242.5 24.5 223 52-275 13-279 (298)
9 2h8l_A Protein disulfide-isome 100.0 9.5E-32 3.2E-36 235.6 19.6 227 158-394 2-251 (252)
10 3ec3_A Protein disulfide-isome 100.0 1.5E-31 5.2E-36 233.8 19.1 225 159-393 3-248 (250)
11 3idv_A Protein disulfide-isome 100.0 3.4E-29 1.2E-33 218.7 24.1 208 54-267 13-239 (241)
12 4f9z_D Endoplasmic reticulum r 100.0 1.7E-27 5.9E-32 205.2 21.1 210 162-376 9-227 (227)
13 3uem_A Protein disulfide-isome 100.0 4.1E-27 1.4E-31 217.9 19.8 237 160-401 15-264 (361)
14 3q6o_A Sulfhydryl oxidase 1; p 99.9 7.1E-23 2.4E-27 178.6 24.8 203 54-261 10-236 (244)
15 3uem_A Protein disulfide-isome 99.9 1.4E-21 4.7E-26 180.8 32.8 300 56-373 17-356 (361)
16 2ppt_A Thioredoxin-2; thiredox 99.9 2E-23 6.8E-28 168.4 16.4 137 26-162 17-153 (155)
17 3p2a_A Thioredoxin 2, putative 99.9 4.1E-23 1.4E-27 165.7 15.8 137 26-162 8-144 (148)
18 1a8l_A Protein disulfide oxido 99.9 1.9E-22 6.6E-27 173.9 19.9 194 64-263 10-224 (226)
19 2ywm_A Glutaredoxin-like prote 99.9 3.9E-22 1.3E-26 172.3 20.8 192 64-263 9-218 (229)
20 3zzx_A Thioredoxin; oxidoreduc 99.9 9.1E-23 3.1E-27 152.5 14.1 96 62-159 7-104 (105)
21 2qsi_A Putative hydrogenase ex 99.9 1.5E-22 5.3E-27 155.4 12.5 105 56-160 15-122 (137)
22 2qgv_A Hydrogenase-1 operon pr 99.9 1E-22 3.5E-27 157.0 10.9 109 57-165 18-129 (140)
23 3gnj_A Thioredoxin domain prot 99.9 9.7E-22 3.3E-26 149.5 15.5 106 56-161 4-110 (111)
24 3t58_A Sulfhydryl oxidase 1; o 99.9 7.5E-21 2.6E-25 181.5 24.9 204 54-262 10-237 (519)
25 3h79_A Thioredoxin-like protei 99.9 4.6E-22 1.6E-26 155.1 13.6 106 54-159 13-126 (127)
26 2voc_A Thioredoxin; electron t 99.9 7.4E-22 2.5E-26 150.3 13.8 105 58-163 3-107 (112)
27 3tco_A Thioredoxin (TRXA-1); d 99.9 1.9E-21 6.5E-26 147.3 14.2 105 56-160 4-108 (109)
28 3die_A Thioredoxin, TRX; elect 99.9 2.6E-21 8.8E-26 145.8 14.3 104 56-160 3-106 (106)
29 2av4_A Thioredoxin-like protei 99.9 8.7E-22 3E-26 153.3 11.8 103 58-160 23-138 (160)
30 2trx_A Thioredoxin; electron t 99.9 3.1E-21 1.1E-25 145.9 14.5 105 56-160 2-107 (108)
31 1nsw_A Thioredoxin, TRX; therm 99.9 2.6E-21 8.9E-26 145.5 13.9 103 58-160 2-104 (105)
32 3qfa_C Thioredoxin; protein-pr 99.9 1.5E-21 5.2E-26 149.5 12.7 105 54-160 10-116 (116)
33 2dj1_A Protein disulfide-isome 99.9 3.4E-21 1.1E-25 153.0 15.0 112 54-166 15-129 (140)
34 3bj5_A Protein disulfide-isome 99.9 1.7E-21 5.8E-26 154.5 11.7 133 259-392 7-147 (147)
35 2yzu_A Thioredoxin; redox prot 99.9 6.2E-21 2.1E-25 144.4 13.9 106 57-162 2-107 (109)
36 3apq_A DNAJ homolog subfamily 99.9 3.6E-21 1.2E-25 163.7 14.0 116 54-169 95-210 (210)
37 3hz4_A Thioredoxin; NYSGXRC, P 99.9 5.5E-21 1.9E-25 151.6 14.0 107 55-161 5-112 (140)
38 1w4v_A Thioredoxin, mitochondr 99.9 8.3E-21 2.8E-25 146.1 14.4 108 53-160 10-118 (119)
39 1x5d_A Protein disulfide-isome 99.9 7.6E-21 2.6E-25 149.5 14.1 107 55-161 6-117 (133)
40 1t00_A Thioredoxin, TRX; redox 99.9 1.2E-20 4E-25 143.7 14.6 106 56-161 5-111 (112)
41 2i4a_A Thioredoxin; acidophIle 99.9 9.5E-21 3.3E-25 142.9 14.0 104 56-159 2-106 (107)
42 1v98_A Thioredoxin; oxidoreduc 99.9 6E-21 2E-25 151.5 13.4 134 27-162 6-139 (140)
43 3f3q_A Thioredoxin-1; His TAG, 99.9 1.8E-20 6.2E-25 141.8 14.9 102 57-160 8-109 (109)
44 1x5e_A Thioredoxin domain cont 99.9 1.1E-20 3.9E-25 147.0 14.2 110 55-167 6-116 (126)
45 2e0q_A Thioredoxin; electron t 99.9 1.2E-20 4.1E-25 141.5 13.8 103 58-161 1-103 (104)
46 2o8v_B Thioredoxin 1; disulfid 99.9 7.2E-21 2.5E-25 148.3 12.9 105 56-160 22-127 (128)
47 3uvt_A Thioredoxin domain-cont 99.9 1.1E-20 3.7E-25 143.6 13.6 103 56-159 5-110 (111)
48 1thx_A Thioredoxin, thioredoxi 99.9 2E-20 6.8E-25 143.1 15.0 106 56-161 7-113 (115)
49 1dby_A Chloroplast thioredoxin 99.8 1.4E-20 4.8E-25 142.0 13.8 104 57-160 2-106 (107)
50 4euy_A Uncharacterized protein 99.8 2.6E-21 9E-26 145.4 8.6 98 62-160 7-104 (105)
51 2dml_A Protein disulfide-isome 99.8 1.6E-20 5.6E-25 147.0 13.2 108 54-161 15-124 (130)
52 1mek_A Protein disulfide isome 99.8 3.3E-21 1.1E-25 148.7 9.0 110 54-163 5-119 (120)
53 1gh2_A Thioredoxin-like protei 99.8 3.2E-20 1.1E-24 140.0 14.3 102 58-161 3-107 (107)
54 1fb6_A Thioredoxin M; electron 99.8 3.1E-20 1.1E-24 139.6 14.1 103 58-160 2-105 (105)
55 2l5l_A Thioredoxin; structural 99.8 3.8E-20 1.3E-24 146.0 15.1 107 55-162 8-127 (136)
56 1r26_A Thioredoxin; redox-acti 99.8 5.2E-20 1.8E-24 142.6 15.1 103 57-161 20-123 (125)
57 1ep7_A Thioredoxin CH1, H-type 99.8 3.9E-20 1.3E-24 140.8 14.1 104 57-161 3-111 (112)
58 3ga4_A Dolichyl-diphosphooligo 99.8 2.2E-20 7.5E-25 151.0 13.3 111 55-165 17-157 (178)
59 3hxs_A Thioredoxin, TRXP; elec 99.8 2.5E-20 8.6E-25 148.1 13.4 109 52-161 18-139 (141)
60 2pu9_C TRX-F, thioredoxin F-ty 99.8 5E-20 1.7E-24 139.9 14.3 104 55-160 4-110 (111)
61 2i1u_A Thioredoxin, TRX, MPT46 99.8 3.5E-20 1.2E-24 143.2 13.5 108 54-161 10-118 (121)
62 1syr_A Thioredoxin; SGPP, stru 99.8 4.9E-20 1.7E-24 140.2 13.8 103 56-160 9-111 (112)
63 3d6i_A Monothiol glutaredoxin- 99.8 4.4E-20 1.5E-24 140.5 13.1 103 58-161 2-109 (112)
64 3aps_A DNAJ homolog subfamily 99.8 2E-20 6.8E-25 144.8 11.2 107 56-162 3-114 (122)
65 1xwb_A Thioredoxin; dimerizati 99.8 8.2E-20 2.8E-24 137.5 14.0 102 58-160 2-106 (106)
66 2vlu_A Thioredoxin, thioredoxi 99.8 9.6E-20 3.3E-24 140.9 14.6 104 56-161 13-120 (122)
67 3gix_A Thioredoxin-like protei 99.8 3.7E-20 1.3E-24 148.0 12.4 100 61-160 9-120 (149)
68 3m9j_A Thioredoxin; oxidoreduc 99.8 1.1E-19 3.6E-24 136.6 14.1 97 62-160 7-105 (105)
69 3qou_A Protein YBBN; thioredox 99.8 5.6E-20 1.9E-24 164.4 14.2 107 55-161 6-114 (287)
70 3ul3_B Thioredoxin, thioredoxi 99.8 1.7E-20 5.7E-25 146.4 9.4 98 61-158 30-127 (128)
71 3dxb_A Thioredoxin N-terminall 99.8 8E-20 2.7E-24 156.7 14.4 113 51-163 7-120 (222)
72 3emx_A Thioredoxin; structural 99.8 4.1E-20 1.4E-24 145.5 11.3 105 55-163 15-128 (135)
73 1oaz_A Thioredoxin 1; immune s 99.8 1.6E-20 5.5E-25 145.1 8.6 105 56-160 3-122 (123)
74 2xc2_A Thioredoxinn; oxidoredu 99.8 1.3E-19 4.5E-24 139.0 13.4 101 57-160 14-117 (117)
75 1xfl_A Thioredoxin H1; AT3G510 99.8 2.1E-19 7.1E-24 139.2 14.3 105 54-160 14-123 (124)
76 2es7_A Q8ZP25_salty, putative 99.8 2E-20 6.8E-25 147.6 8.6 111 57-168 18-132 (142)
77 2oe3_A Thioredoxin-3; electron 99.8 1.2E-19 4E-24 138.4 12.6 101 56-158 12-113 (114)
78 2djj_A PDI, protein disulfide- 99.8 2.2E-20 7.6E-25 144.3 8.6 106 54-162 5-118 (121)
79 2vim_A Thioredoxin, TRX; thior 99.8 2.5E-19 8.7E-24 134.3 14.2 100 59-160 2-104 (104)
80 2l6c_A Thioredoxin; oxidoreduc 99.8 8E-20 2.7E-24 138.4 11.3 103 58-162 5-107 (110)
81 1zma_A Bacterocin transport ac 99.8 5.4E-20 1.8E-24 141.4 10.4 103 56-158 12-118 (118)
82 2l57_A Uncharacterized protein 99.8 6.4E-20 2.2E-24 142.7 10.6 96 68-163 21-119 (126)
83 1faa_A Thioredoxin F; electron 99.8 3.2E-19 1.1E-23 138.3 14.5 103 56-160 18-123 (124)
84 3f8u_A Protein disulfide-isome 99.8 2.7E-17 9.3E-22 157.8 30.8 305 56-377 110-464 (481)
85 2wz9_A Glutaredoxin-3; protein 99.8 4.1E-19 1.4E-23 143.0 14.4 105 56-162 12-119 (153)
86 2j23_A Thioredoxin; immune pro 99.8 2.5E-19 8.4E-24 138.2 12.5 106 54-160 13-120 (121)
87 2dj0_A Thioredoxin-related tra 99.8 1.7E-20 5.7E-25 148.3 5.0 104 56-159 7-119 (137)
88 3evi_A Phosducin-like protein 99.8 5.6E-19 1.9E-23 134.3 12.9 100 56-159 3-112 (118)
89 2vm1_A Thioredoxin, thioredoxi 99.8 1.2E-18 4.1E-23 133.8 14.4 105 56-162 6-115 (118)
90 1qgv_A Spliceosomal protein U5 99.8 3.5E-19 1.2E-23 141.1 11.6 99 62-160 10-120 (142)
91 2dj3_A Protein disulfide-isome 99.8 4.7E-20 1.6E-24 145.0 6.5 111 54-164 5-121 (133)
92 3d22_A TRXH4, thioredoxin H-ty 99.8 1.7E-18 5.8E-23 137.1 15.2 106 55-162 23-133 (139)
93 2hls_A Protein disulfide oxido 99.8 4.3E-18 1.5E-22 147.5 19.0 190 64-265 15-226 (243)
94 2f51_A Thioredoxin; electron t 99.8 1E-18 3.4E-23 134.1 13.3 104 57-162 4-114 (118)
95 1ti3_A Thioredoxin H, PTTRXH1; 99.8 8E-19 2.7E-23 133.7 11.8 103 56-160 4-111 (113)
96 3idv_A Protein disulfide-isome 99.8 1.9E-18 6.5E-23 150.4 13.7 109 55-164 129-240 (241)
97 2djk_A PDI, protein disulfide- 99.8 9.3E-19 3.2E-23 137.2 10.5 123 262-387 2-130 (133)
98 3cxg_A Putative thioredoxin; m 99.8 1.4E-18 4.9E-23 136.2 11.2 105 55-162 19-130 (133)
99 2dbc_A PDCL2, unnamed protein 99.8 2.9E-18 9.8E-23 134.8 12.6 103 54-160 8-120 (135)
100 2kuc_A Putative disulphide-iso 99.7 4.7E-18 1.6E-22 132.9 10.1 105 59-163 9-123 (130)
101 2yj7_A LPBCA thioredoxin; oxid 99.6 8.4E-20 2.9E-24 137.4 0.0 102 58-159 3-105 (106)
102 1a8l_A Protein disulfide oxido 99.7 1.1E-17 3.9E-22 143.9 13.1 103 58-160 118-225 (226)
103 2c0g_A ERP29 homolog, windbeut 99.7 3E-17 1E-21 140.8 14.5 120 54-178 14-149 (248)
104 3fk8_A Disulphide isomerase; A 99.7 9.7E-18 3.3E-22 131.6 10.5 93 68-160 24-132 (133)
105 2fwh_A Thiol:disulfide interch 99.7 1.2E-17 4.1E-22 131.2 9.8 100 61-161 17-128 (134)
106 2trc_P Phosducin, MEKA, PP33; 99.7 1.9E-17 6.4E-22 140.3 9.3 103 55-159 98-211 (217)
107 3iv4_A Putative oxidoreductase 99.7 4.9E-17 1.7E-21 119.5 10.2 98 57-156 7-111 (112)
108 1a0r_P Phosducin, MEKA, PP33; 99.7 5.3E-17 1.8E-21 139.2 11.5 105 54-160 110-225 (245)
109 1fo5_A Thioredoxin; disulfide 99.7 2.3E-17 7.8E-22 118.6 7.7 83 74-160 3-85 (85)
110 2qc7_A ERP31, ERP28, endoplasm 99.7 1.1E-16 3.6E-21 137.1 12.8 101 56-160 5-118 (240)
111 1wou_A Thioredoxin -related pr 99.7 6.5E-17 2.2E-21 124.9 10.2 101 57-158 6-122 (123)
112 1nho_A Probable thioredoxin; b 99.7 2.6E-17 8.8E-22 118.3 7.1 82 75-160 3-84 (85)
113 1wmj_A Thioredoxin H-type; str 99.7 3.2E-18 1.1E-22 133.8 2.4 105 56-162 14-123 (130)
114 2djk_A PDI, protein disulfide- 99.7 1.1E-16 3.9E-21 125.2 10.8 106 57-164 7-118 (133)
115 3f9u_A Putative exported cytoc 99.7 3.5E-17 1.2E-21 134.5 8.0 101 60-160 30-165 (172)
116 1lu4_A Soluble secreted antige 99.7 1.2E-16 4E-21 125.8 10.2 102 57-160 8-135 (136)
117 2b5e_A Protein disulfide-isome 99.7 6.2E-15 2.1E-19 142.2 23.9 297 57-377 124-470 (504)
118 2b5x_A YKUV protein, TRXY; thi 99.7 4.6E-16 1.6E-20 124.3 13.2 103 59-161 15-145 (148)
119 1zzo_A RV1677; thioredoxin fol 99.7 2.4E-16 8.2E-21 123.9 10.7 104 56-161 8-135 (136)
120 3dml_A Putative uncharacterize 99.7 1E-16 3.5E-21 119.7 7.8 90 72-161 17-110 (116)
121 4f9z_D Endoplasmic reticulum r 99.7 1.1E-14 3.9E-19 124.9 21.3 197 56-262 9-222 (227)
122 2ju5_A Thioredoxin disulfide i 99.7 3.2E-16 1.1E-20 126.0 10.9 97 64-161 38-152 (154)
123 3qcp_A QSOX from trypanosoma b 99.7 1.9E-17 6.6E-22 153.7 3.4 99 54-152 21-131 (470)
124 2lst_A Thioredoxin; structural 99.5 9.3E-18 3.2E-22 131.2 0.0 99 63-161 9-116 (130)
125 2ywm_A Glutaredoxin-like prote 99.6 6.6E-16 2.3E-20 133.1 11.4 101 57-161 119-220 (229)
126 3or5_A Thiol:disulfide interch 99.6 9.2E-16 3.1E-20 125.0 11.5 106 56-161 17-151 (165)
127 3kp8_A Vkorc1/thioredoxin doma 99.6 1.6E-16 5.6E-21 118.5 5.6 77 72-159 11-93 (106)
128 3raz_A Thioredoxin-related pro 99.6 1.1E-15 3.7E-20 122.7 10.9 91 72-162 23-141 (151)
129 3lor_A Thiol-disulfide isomera 99.6 2.3E-15 7.9E-20 122.0 12.5 106 57-162 13-156 (160)
130 2h30_A Thioredoxin, peptide me 99.6 1E-15 3.5E-20 124.6 10.3 105 57-161 22-156 (164)
131 2f9s_A Thiol-disulfide oxidore 99.6 1.1E-15 3.8E-20 122.6 10.2 92 72-163 25-140 (151)
132 3eyt_A Uncharacterized protein 99.6 2.2E-15 7.4E-20 121.9 11.8 92 71-162 26-153 (158)
133 1sen_A Thioredoxin-like protei 99.6 1.6E-16 5.6E-21 129.0 4.5 98 64-161 37-148 (164)
134 2hls_A Protein disulfide oxido 99.6 4E-15 1.4E-19 128.8 13.2 100 61-164 125-229 (243)
135 3erw_A Sporulation thiol-disul 99.6 9E-16 3.1E-20 122.1 7.8 86 72-157 33-145 (145)
136 2lja_A Putative thiol-disulfid 99.6 2.1E-15 7E-20 121.1 9.2 106 57-162 14-144 (152)
137 4evm_A Thioredoxin family prot 99.6 2.8E-15 9.7E-20 117.9 9.5 89 71-159 20-137 (138)
138 3ia1_A THIO-disulfide isomeras 99.6 3.7E-15 1.3E-19 119.9 9.8 104 57-163 15-146 (154)
139 1sji_A Calsequestrin 2, calseq 99.6 4.5E-14 1.5E-18 129.5 18.1 206 164-385 13-237 (350)
140 3hcz_A Possible thiol-disulfid 99.6 2E-15 6.8E-20 120.6 8.0 104 57-160 15-145 (148)
141 1ilo_A Conserved hypothetical 99.6 4.7E-15 1.6E-19 104.1 8.8 74 76-156 2-76 (77)
142 2l5o_A Putative thioredoxin; s 99.6 5.1E-15 1.7E-19 119.0 9.9 106 57-162 12-142 (153)
143 1z6n_A Hypothetical protein PA 99.6 5.7E-15 1.9E-19 119.5 9.4 95 60-157 40-139 (167)
144 3us3_A Calsequestrin-1; calciu 99.6 5.6E-14 1.9E-18 129.4 17.1 205 163-383 14-237 (367)
145 2lrt_A Uncharacterized protein 99.6 1.5E-14 5.1E-19 116.1 10.9 101 56-156 18-143 (152)
146 3eur_A Uncharacterized protein 99.6 7.7E-15 2.6E-19 116.3 9.1 99 57-158 15-142 (142)
147 3lwa_A Secreted thiol-disulfid 99.6 1.1E-14 3.7E-19 120.8 10.3 106 56-161 40-181 (183)
148 3ed3_A Protein disulfide-isome 99.6 2.5E-13 8.6E-18 121.1 19.8 204 162-375 17-268 (298)
149 2lrn_A Thiol:disulfide interch 99.6 7.9E-15 2.7E-19 117.7 9.0 87 72-161 28-141 (152)
150 3fkf_A Thiol-disulfide oxidore 99.6 7.2E-15 2.5E-19 117.3 8.8 102 57-161 15-146 (148)
151 3gl3_A Putative thiol:disulfid 99.6 1.7E-14 5.8E-19 115.7 10.8 92 71-162 26-143 (152)
152 3ira_A Conserved protein; meth 99.6 4.4E-15 1.5E-19 120.1 7.1 83 60-142 26-120 (173)
153 3ewl_A Uncharacterized conserv 99.6 7.4E-15 2.5E-19 116.4 8.4 100 58-160 12-140 (142)
154 2b1k_A Thiol:disulfide interch 99.6 1.1E-14 3.8E-19 118.9 9.5 104 55-161 30-160 (168)
155 3hdc_A Thioredoxin family prot 99.6 1.8E-14 6.2E-19 116.4 10.5 106 56-161 24-152 (158)
156 3ph9_A Anterior gradient prote 99.6 6.9E-15 2.4E-19 116.5 7.7 96 64-160 35-144 (151)
157 1kng_A Thiol:disulfide interch 99.6 1.2E-14 4.2E-19 117.1 9.3 96 64-161 33-152 (156)
158 3ha9_A Uncharacterized thiored 99.5 1.7E-14 5.9E-19 117.5 9.5 102 57-161 21-164 (165)
159 3kcm_A Thioredoxin family prot 99.5 2.2E-14 7.4E-19 115.4 9.5 104 58-161 13-143 (154)
160 3kh7_A Thiol:disulfide interch 99.5 3.6E-14 1.2E-18 116.8 10.4 103 56-161 39-167 (176)
161 3fw2_A Thiol-disulfide oxidore 99.5 5.6E-14 1.9E-18 112.5 10.3 101 57-160 15-147 (150)
162 1jfu_A Thiol:disulfide interch 99.5 1.1E-13 3.7E-18 115.1 10.6 107 57-163 44-182 (186)
163 4fo5_A Thioredoxin-like protei 99.5 7.9E-14 2.7E-18 110.6 9.2 84 72-158 31-142 (143)
164 2fgx_A Putative thioredoxin; N 99.5 7.7E-14 2.6E-18 102.8 8.3 77 75-156 30-106 (107)
165 2hyx_A Protein DIPZ; thioredox 99.5 1.1E-13 3.6E-18 125.5 10.9 101 60-160 69-198 (352)
166 2ywi_A Hypothetical conserved 99.5 1.1E-13 3.6E-18 116.2 10.1 103 60-162 32-175 (196)
167 1i5g_A Tryparedoxin II; electr 99.5 9.7E-14 3.3E-18 110.2 9.1 88 57-144 12-127 (144)
168 2cvb_A Probable thiol-disulfid 99.5 1.3E-13 4.5E-18 114.8 9.8 105 58-162 18-160 (188)
169 1ttz_A Conserved hypothetical 99.5 8.6E-14 2.9E-18 99.1 7.2 74 77-160 3-76 (87)
170 3s9f_A Tryparedoxin; thioredox 99.5 9.5E-14 3.3E-18 112.9 8.0 87 57-144 33-147 (165)
171 1o8x_A Tryparedoxin, TRYX, TXN 99.5 1.3E-13 4.4E-18 109.8 8.1 86 58-144 14-127 (146)
172 2ggt_A SCO1 protein homolog, m 99.4 2.7E-13 9.4E-18 110.1 9.2 90 72-161 22-161 (164)
173 1o73_A Tryparedoxin; electron 99.4 2.5E-13 8.6E-18 107.8 8.2 72 72-143 27-126 (144)
174 2rli_A SCO2 protein homolog, m 99.4 4.1E-13 1.4E-17 109.9 9.5 90 72-161 25-164 (171)
175 2h8l_A Protein disulfide-isome 99.4 1.6E-11 5.4E-16 107.0 19.5 196 57-263 7-228 (252)
176 2vup_A Glutathione peroxidase- 99.4 7.3E-13 2.5E-17 110.4 10.4 106 56-161 31-185 (190)
177 3u5r_E Uncharacterized protein 99.4 7.5E-13 2.6E-17 112.7 10.7 108 55-162 40-188 (218)
178 3dwv_A Glutathione peroxidase- 99.4 7.4E-13 2.5E-17 110.0 9.9 108 54-161 27-183 (187)
179 3drn_A Peroxiredoxin, bacterio 99.4 1.1E-12 3.6E-17 106.3 10.1 90 57-146 12-130 (161)
180 3cmi_A Peroxiredoxin HYR1; thi 99.4 3.8E-13 1.3E-17 110.1 7.2 104 57-161 16-168 (171)
181 2ls5_A Uncharacterized protein 99.1 4E-14 1.4E-18 114.5 0.0 103 57-160 17-147 (159)
182 2r2j_A Thioredoxin domain-cont 99.4 1E-11 3.5E-16 115.1 16.2 199 163-377 6-221 (382)
183 2v1m_A Glutathione peroxidase; 99.4 9.8E-13 3.3E-17 107.4 8.1 105 57-161 15-167 (169)
184 2k6v_A Putative cytochrome C o 99.4 5.6E-13 1.9E-17 109.2 6.3 88 72-159 34-171 (172)
185 2p5q_A Glutathione peroxidase 99.4 1E-12 3.4E-17 107.4 7.3 104 58-161 17-168 (170)
186 2l4c_A Endoplasmic reticulum r 99.4 3.3E-12 1.1E-16 97.4 9.5 104 158-265 15-124 (124)
187 2p31_A CL683, glutathione pero 99.4 1.1E-12 3.8E-17 108.3 7.4 104 57-160 33-180 (181)
188 2f8a_A Glutathione peroxidase 99.4 1.1E-12 3.7E-17 110.6 7.3 89 72-160 46-206 (208)
189 2lus_A Thioredoxion; CR-Trp16, 99.0 9.3E-14 3.2E-18 110.1 0.0 87 57-143 8-125 (143)
190 1xvw_A Hypothetical protein RV 99.3 3.5E-12 1.2E-16 103.1 8.8 101 58-158 20-157 (160)
191 1we0_A Alkyl hydroperoxide red 99.3 2.1E-12 7.3E-17 107.2 7.1 90 72-161 30-157 (187)
192 3ec3_A Protein disulfide-isome 99.3 2.3E-10 7.9E-15 99.4 20.3 196 57-263 7-226 (250)
193 2obi_A PHGPX, GPX-4, phospholi 99.3 2.4E-12 8.2E-17 106.5 7.3 103 57-159 31-182 (183)
194 2dlx_A UBX domain-containing p 99.3 8.4E-12 2.9E-16 98.8 9.9 89 71-160 40-135 (153)
195 3kp9_A Vkorc1/thioredoxin doma 99.3 6.2E-12 2.1E-16 109.9 10.0 83 65-160 191-279 (291)
196 3kij_A Probable glutathione pe 99.3 2.5E-12 8.4E-17 106.2 7.0 106 55-160 20-169 (180)
197 1zof_A Alkyl hydroperoxide-red 99.3 2.5E-12 8.5E-17 107.9 7.1 89 72-160 32-160 (198)
198 2bmx_A Alkyl hydroperoxidase C 99.3 4.9E-12 1.7E-16 105.8 8.2 90 72-161 44-170 (195)
199 2e7p_A Glutaredoxin; thioredox 99.3 1.5E-12 5E-17 99.2 4.3 87 65-159 12-106 (116)
200 2gs3_A PHGPX, GPX-4, phospholi 99.3 3.4E-12 1.2E-16 105.8 6.9 103 57-159 33-184 (185)
201 1qmv_A Human thioredoxin perox 99.2 2.4E-11 8.3E-16 101.7 9.6 89 72-160 33-162 (197)
202 1wjk_A C330018D20RIK protein; 99.2 2.4E-11 8E-16 89.4 7.5 79 73-160 15-95 (100)
203 2jsy_A Probable thiol peroxida 99.2 4.9E-11 1.7E-15 97.0 10.1 104 56-160 27-166 (167)
204 2b7k_A SCO1 protein; metalloch 99.2 2.5E-11 8.5E-16 101.8 8.5 106 56-161 24-179 (200)
205 2i3y_A Epididymal secretory gl 99.2 6.7E-11 2.3E-15 99.8 10.7 106 55-161 37-211 (215)
206 1nm3_A Protein HI0572; hybrid, 99.2 5.4E-10 1.8E-14 96.6 16.0 143 72-235 32-224 (241)
207 1uul_A Tryparedoxin peroxidase 99.2 3.7E-11 1.3E-15 101.0 8.2 89 72-160 35-164 (202)
208 2h01_A 2-Cys peroxiredoxin; th 99.2 3.6E-11 1.2E-15 100.2 7.9 89 72-160 30-158 (192)
209 2i81_A 2-Cys peroxiredoxin; st 99.2 5E-11 1.7E-15 100.9 8.8 89 72-160 51-179 (213)
210 1hyu_A AHPF, alkyl hydroperoxi 99.2 1.2E-10 4.3E-15 112.2 12.2 96 59-159 102-198 (521)
211 1xzo_A BSSCO, hypothetical pro 99.2 7.8E-11 2.7E-15 96.5 9.1 104 58-161 18-172 (174)
212 2k8s_A Thioredoxin; dimer, str 99.2 1.8E-11 6.1E-16 86.2 4.6 63 76-140 3-66 (80)
213 3gkn_A Bacterioferritin comigr 99.2 8.6E-11 2.9E-15 95.1 8.4 102 58-159 20-160 (163)
214 1zye_A Thioredoxin-dependent p 99.1 1.4E-10 4.9E-15 98.6 9.6 89 72-160 55-184 (220)
215 3ztl_A Thioredoxin peroxidase; 99.1 1.4E-10 4.8E-15 98.8 9.3 87 72-158 68-195 (222)
216 2r37_A Glutathione peroxidase 99.1 1.5E-10 5.2E-15 97.1 9.3 104 57-161 21-193 (207)
217 1xvq_A Thiol peroxidase; thior 99.1 8.3E-11 2.8E-15 96.4 7.1 86 58-145 29-147 (175)
218 1ego_A Glutaredoxin; electron 99.1 2.2E-10 7.4E-15 81.6 8.2 76 76-160 2-83 (85)
219 4g2e_A Peroxiredoxin; redox pr 99.1 5E-11 1.7E-15 95.8 5.3 101 58-158 15-155 (157)
220 2c0d_A Thioredoxin peroxidase 99.1 3.6E-10 1.2E-14 95.9 8.4 89 72-160 55-183 (221)
221 4gqc_A Thiol peroxidase, perox 99.0 1.3E-10 4.4E-15 94.0 5.0 105 57-161 15-160 (164)
222 1n8j_A AHPC, alkyl hydroperoxi 99.0 1.1E-09 3.6E-14 90.7 10.3 89 72-160 29-155 (186)
223 3ixr_A Bacterioferritin comigr 99.0 7.4E-10 2.5E-14 91.0 9.0 106 54-159 32-176 (179)
224 3me7_A Putative uncharacterize 99.0 1.1E-09 3.7E-14 89.2 9.9 106 57-162 12-163 (170)
225 1psq_A Probable thiol peroxida 99.0 1.3E-09 4.3E-14 88.2 9.6 100 58-158 27-162 (163)
226 2a4v_A Peroxiredoxin DOT5; yea 99.0 7.2E-10 2.4E-14 89.2 8.0 76 73-150 35-140 (159)
227 1eej_A Thiol:disulfide interch 99.0 8.7E-10 3E-14 93.4 8.3 82 72-160 85-210 (216)
228 3gyk_A 27KDA outer membrane pr 99.0 2.4E-09 8.1E-14 87.7 10.1 84 72-161 21-173 (175)
229 3q6o_A Sulfhydryl oxidase 1; p 99.0 2.9E-08 1E-12 85.8 17.5 195 162-372 12-238 (244)
230 2pn8_A Peroxiredoxin-4; thiore 99.0 3E-09 1E-13 89.7 10.3 89 72-160 47-176 (211)
231 2yzh_A Probable thiol peroxida 98.9 1.1E-09 3.8E-14 89.3 6.8 100 58-159 32-170 (171)
232 3p7x_A Probable thiol peroxida 98.9 2E-09 6.9E-14 87.2 8.2 101 56-158 29-165 (166)
233 3qpm_A Peroxiredoxin; oxidored 98.9 2.1E-09 7.4E-14 92.4 8.0 88 72-159 76-204 (240)
234 1q98_A Thiol peroxidase, TPX; 98.9 2.8E-09 9.6E-14 86.3 8.3 87 58-145 28-148 (165)
235 3a2v_A Probable peroxiredoxin; 98.9 3.3E-09 1.1E-13 91.1 8.6 94 67-160 27-161 (249)
236 2l4c_A Endoplasmic reticulum r 98.9 3.7E-08 1.3E-12 74.9 13.0 97 55-159 20-122 (124)
237 3uma_A Hypothetical peroxiredo 98.9 4.4E-09 1.5E-13 86.4 8.5 90 56-146 35-167 (184)
238 1tp9_A Peroxiredoxin, PRX D (t 98.9 6.5E-09 2.2E-13 83.8 9.1 75 72-146 34-146 (162)
239 4hde_A SCO1/SENC family lipopr 98.9 1.4E-08 4.9E-13 82.4 10.9 107 54-160 13-169 (170)
240 1t3b_A Thiol:disulfide interch 98.9 4.2E-09 1.4E-13 88.8 7.9 81 72-159 85-209 (211)
241 2wfc_A Peroxiredoxin 5, PRDX5; 98.9 5.8E-09 2E-13 84.4 8.4 75 72-146 30-142 (167)
242 3t58_A Sulfhydryl oxidase 1; o 98.9 1.5E-07 5.1E-12 89.9 18.8 194 163-371 13-237 (519)
243 3zrd_A Thiol peroxidase; oxido 98.8 8.2E-09 2.8E-13 86.3 8.6 89 56-145 61-183 (200)
244 3tjj_A Peroxiredoxin-4; thiore 98.8 4.2E-09 1.4E-13 91.2 6.1 88 72-159 90-218 (254)
245 1h75_A Glutaredoxin-like prote 98.8 5.6E-09 1.9E-13 73.4 5.7 71 77-159 3-76 (81)
246 3h93_A Thiol:disulfide interch 98.8 1.9E-08 6.5E-13 83.5 9.0 87 72-160 24-183 (192)
247 2pwj_A Mitochondrial peroxired 98.8 1.4E-08 4.9E-13 82.5 8.0 76 71-146 42-154 (171)
248 1r7h_A NRDH-redoxin; thioredox 98.8 3.2E-08 1.1E-12 68.3 8.5 69 77-157 3-74 (75)
249 3mng_A Peroxiredoxin-5, mitoch 98.8 1.7E-08 5.7E-13 82.0 8.0 75 72-146 42-156 (173)
250 1v58_A Thiol:disulfide interch 98.8 3.4E-08 1.2E-12 85.0 10.1 86 73-161 97-233 (241)
251 3zzx_A Thioredoxin; oxidoreduc 98.8 4.1E-08 1.4E-12 72.6 8.9 96 164-264 2-105 (105)
252 1kte_A Thioltransferase; redox 98.7 1E-08 3.5E-13 76.0 5.3 73 64-143 3-82 (105)
253 3ga4_A Dolichyl-diphosphooligo 98.7 1.3E-07 4.5E-12 76.3 11.5 117 256-377 8-156 (178)
254 1prx_A HORF6; peroxiredoxin, h 98.7 8.1E-08 2.8E-12 81.6 10.7 86 75-160 34-168 (224)
255 3tco_A Thioredoxin (TRXA-1); d 98.7 6.2E-08 2.1E-12 72.1 8.8 104 266-374 4-109 (109)
256 3hd5_A Thiol:disulfide interch 98.7 5.5E-08 1.9E-12 80.9 9.0 43 72-114 24-66 (195)
257 2dml_A Protein disulfide-isome 98.7 2E-07 7E-12 71.8 11.0 103 267-374 18-124 (130)
258 3gnj_A Thioredoxin domain prot 98.7 8.1E-08 2.8E-12 71.8 8.3 102 268-374 6-110 (111)
259 3hxs_A Thioredoxin, TRXP; elec 98.7 1.4E-07 4.7E-12 73.9 9.9 88 283-375 51-140 (141)
260 2v2g_A Peroxiredoxin 6; oxidor 98.6 9.2E-08 3.1E-12 81.5 9.1 87 74-160 30-164 (233)
261 3h79_A Thioredoxin-like protei 98.6 2.5E-07 8.7E-12 71.0 10.9 102 266-372 15-126 (127)
262 2trx_A Thioredoxin; electron t 98.6 2.7E-07 9.3E-12 68.5 10.5 102 267-373 3-107 (108)
263 3die_A Thioredoxin, TRX; elect 98.6 1.6E-07 5.5E-12 69.4 9.2 101 267-373 4-106 (106)
264 1xcc_A 1-Cys peroxiredoxin; un 98.6 7.1E-08 2.4E-12 81.7 8.1 86 75-160 34-165 (220)
265 1thx_A Thioredoxin, thioredoxi 98.6 3.5E-07 1.2E-11 68.7 10.7 104 267-375 8-114 (115)
266 1v98_A Thioredoxin; oxidoreduc 98.6 2.4E-07 8E-12 72.6 10.0 106 266-376 33-140 (140)
267 2yzu_A Thioredoxin; redox prot 98.6 1.3E-07 4.4E-12 70.3 8.1 103 268-375 3-107 (109)
268 1nsw_A Thioredoxin, TRX; therm 98.6 1.3E-07 4.5E-12 69.9 8.0 101 268-373 2-104 (105)
269 2cq9_A GLRX2 protein, glutared 98.6 4.1E-08 1.4E-12 75.7 5.3 87 63-159 17-113 (130)
270 3hz4_A Thioredoxin; NYSGXRC, P 98.6 1.1E-07 3.8E-12 74.4 7.7 114 266-384 6-124 (140)
271 2voc_A Thioredoxin; electron t 98.6 2.3E-07 7.9E-12 69.5 9.2 102 268-375 3-106 (112)
272 3p2a_A Thioredoxin 2, putative 98.6 2.8E-07 9.4E-12 72.9 9.9 104 267-375 39-144 (148)
273 2o8v_B Thioredoxin 1; disulfid 98.6 2.7E-07 9.2E-12 71.0 9.6 102 268-374 24-128 (128)
274 1x5e_A Thioredoxin domain cont 98.6 2.6E-07 9E-12 70.8 9.3 105 266-377 7-113 (126)
275 2l5l_A Thioredoxin; structural 98.6 3.2E-07 1.1E-11 71.4 9.6 88 283-375 38-127 (136)
276 2hze_A Glutaredoxin-1; thiored 98.6 1.5E-08 5.1E-13 76.4 1.6 64 75-143 19-89 (114)
277 2ppt_A Thioredoxin-2; thiredox 98.6 2.6E-07 9E-12 73.6 9.0 103 268-375 49-153 (155)
278 2e0q_A Thioredoxin; electron t 98.6 2.8E-07 9.5E-12 67.8 8.5 100 269-374 2-103 (104)
279 1dby_A Chloroplast thioredoxin 98.5 3.2E-07 1.1E-11 68.0 8.8 102 268-374 3-107 (107)
280 2i4a_A Thioredoxin; acidophIle 98.5 4.7E-07 1.6E-11 67.0 9.7 101 268-373 4-107 (107)
281 1fb6_A Thioredoxin M; electron 98.5 3.8E-07 1.3E-11 67.2 9.0 101 268-373 2-105 (105)
282 2qc7_A ERP31, ERP28, endoplasm 98.5 5.1E-07 1.7E-11 77.0 10.7 97 163-264 6-118 (240)
283 1w4v_A Thioredoxin, mitochondr 98.5 3.3E-07 1.1E-11 69.5 8.6 103 266-373 13-118 (119)
284 3aps_A DNAJ homolog subfamily 98.5 2.5E-07 8.5E-12 70.4 7.7 103 268-375 5-114 (122)
285 2qsi_A Putative hydrogenase ex 98.5 3.7E-07 1.3E-11 69.9 8.4 100 269-373 18-122 (137)
286 2djj_A PDI, protein disulfide- 98.5 1.2E-06 4E-11 66.5 11.4 103 266-376 7-119 (121)
287 1x5d_A Protein disulfide-isome 98.5 6.1E-07 2.1E-11 69.4 9.9 106 266-376 7-119 (133)
288 1t00_A Thioredoxin, TRX; redox 98.5 5.5E-07 1.9E-11 67.3 9.2 102 268-374 7-111 (112)
289 2ht9_A Glutaredoxin-2; thiored 98.5 8.5E-08 2.9E-12 75.3 4.6 70 63-142 39-115 (146)
290 3qfa_C Thioredoxin; protein-pr 98.5 3.1E-07 1.1E-11 69.3 7.5 101 266-373 12-116 (116)
291 2dj3_A Protein disulfide-isome 98.5 1.1E-06 3.8E-11 67.9 10.8 108 265-377 6-121 (133)
292 2dj1_A Protein disulfide-isome 98.5 4.1E-07 1.4E-11 71.1 8.2 105 267-377 18-127 (140)
293 3keb_A Probable thiol peroxida 98.5 6E-07 2.1E-11 75.3 9.3 101 57-161 32-176 (224)
294 2av4_A Thioredoxin-like protei 98.5 6E-07 2.1E-11 70.0 8.6 102 268-375 23-140 (160)
295 2i1u_A Thioredoxin, TRX, MPT46 98.5 5E-07 1.7E-11 68.5 8.0 105 266-375 12-119 (121)
296 3apq_A DNAJ homolog subfamily 98.5 6.6E-07 2.2E-11 75.3 9.4 107 266-377 97-205 (210)
297 3dxb_A Thioredoxin N-terminall 98.5 8.8E-07 3E-11 75.2 10.2 107 266-377 12-121 (222)
298 4euy_A Uncharacterized protein 98.5 6.4E-07 2.2E-11 66.2 8.2 96 272-373 7-104 (105)
299 1mek_A Protein disulfide isome 98.5 4.8E-07 1.6E-11 68.4 7.7 103 268-375 9-118 (120)
300 3uvt_A Thioredoxin domain-cont 98.4 8E-07 2.7E-11 66.2 8.7 101 267-372 6-110 (111)
301 2c0g_A ERP29 homolog, windbeut 98.4 1.2E-06 4E-11 75.0 10.2 98 162-265 16-132 (248)
302 3ul3_B Thioredoxin, thioredoxi 98.4 1.3E-06 4.3E-11 67.1 9.4 102 265-371 24-127 (128)
303 1xwb_A Thioredoxin; dimerizati 98.4 1E-06 3.5E-11 65.0 8.4 99 269-373 3-106 (106)
304 2qgv_A Hydrogenase-1 operon pr 98.4 3.3E-07 1.1E-11 70.5 5.4 103 268-375 19-126 (140)
305 3hz8_A Thiol:disulfide interch 98.4 1.7E-06 5.8E-11 71.6 10.1 42 72-113 23-64 (193)
306 3c1r_A Glutaredoxin-1; oxidize 98.4 1.4E-07 4.9E-12 71.3 3.2 71 64-141 16-94 (118)
307 1r26_A Thioredoxin; redox-acti 98.4 8E-07 2.7E-11 68.0 7.4 101 268-375 21-124 (125)
308 1ep7_A Thioredoxin CH1, H-type 98.4 8.9E-07 3E-11 66.1 7.5 96 273-374 10-111 (112)
309 3ic4_A Glutaredoxin (GRX-1); s 98.4 8.7E-07 3E-11 63.7 7.0 70 76-157 13-91 (92)
310 2znm_A Thiol:disulfide interch 98.4 1E-06 3.5E-11 73.1 8.2 42 72-113 21-62 (195)
311 2l57_A Uncharacterized protein 98.4 2.8E-06 9.6E-11 64.9 10.1 103 268-375 6-118 (126)
312 2vlu_A Thioredoxin, thioredoxi 98.4 1.2E-06 4.3E-11 66.5 7.9 103 266-375 13-121 (122)
313 2es7_A Q8ZP25_salty, putative 98.3 6.2E-07 2.1E-11 70.1 5.7 105 267-377 18-128 (142)
314 1syr_A Thioredoxin; SGPP, stru 98.3 1.2E-06 4E-11 65.6 6.9 100 267-373 10-111 (112)
315 2j23_A Thioredoxin; immune pro 98.3 1.4E-06 4.7E-11 66.2 7.2 101 268-374 17-121 (121)
316 2yan_A Glutaredoxin-3; oxidore 98.3 1.8E-06 6.1E-11 63.7 7.5 67 64-140 8-83 (105)
317 3gv1_A Disulfide interchange p 98.3 1.1E-06 3.8E-11 68.9 6.5 81 72-161 13-139 (147)
318 2lqo_A Putative glutaredoxin R 98.3 2.5E-06 8.5E-11 60.8 7.7 75 76-161 5-84 (92)
319 3m9j_A Thioredoxin; oxidoreduc 98.3 1.9E-06 6.4E-11 63.4 7.5 94 273-373 8-105 (105)
320 2wz9_A Glutaredoxin-3; protein 98.3 2.1E-06 7.2E-11 68.2 8.2 121 268-400 14-140 (153)
321 1z6m_A Conserved hypothetical 98.3 4.6E-06 1.6E-10 67.8 10.2 81 72-157 26-174 (175)
322 2vim_A Thioredoxin, TRX; thior 98.3 2.5E-06 8.7E-11 62.5 7.9 93 274-373 8-104 (104)
323 4dvc_A Thiol:disulfide interch 98.3 4.5E-06 1.5E-10 68.4 10.0 87 72-160 20-181 (184)
324 3f3q_A Thioredoxin-1; His TAG, 98.3 3.1E-06 1E-10 62.9 8.2 98 269-373 10-109 (109)
325 2pu9_C TRX-F, thioredoxin F-ty 98.3 5.7E-06 2E-10 61.6 9.6 103 266-374 5-111 (111)
326 1oaz_A Thioredoxin 1; immune s 98.3 1.5E-06 5.1E-11 66.2 6.4 101 268-373 5-122 (123)
327 3qou_A Protein YBBN; thioredox 98.3 2.8E-06 9.5E-11 75.2 9.0 106 265-375 6-115 (287)
328 2klx_A Glutaredoxin; thioredox 98.2 1.3E-06 4.5E-11 62.2 5.3 56 76-139 7-65 (89)
329 2l6c_A Thioredoxin; oxidoreduc 98.2 3.4E-06 1.2E-10 62.8 7.8 101 268-375 5-107 (110)
330 4f82_A Thioredoxin reductase; 98.2 5.5E-06 1.9E-10 66.7 9.2 80 66-145 41-157 (176)
331 2xc2_A Thioredoxinn; oxidoredu 98.2 4.2E-06 1.4E-10 63.0 7.9 98 268-373 15-117 (117)
332 1un2_A DSBA, thiol-disulfide i 98.2 5.3E-07 1.8E-11 74.7 3.0 44 73-116 113-159 (197)
333 2oe3_A Thioredoxin-3; electron 98.2 9.7E-06 3.3E-10 60.7 9.8 96 162-262 12-113 (114)
334 3l9v_A Putative thiol-disulfid 98.2 2.6E-06 9E-11 70.2 7.1 41 73-113 14-57 (189)
335 3d6i_A Monothiol glutaredoxin- 98.2 4.7E-06 1.6E-10 62.1 8.0 100 269-374 3-109 (112)
336 3nzn_A Glutaredoxin; structura 98.2 5.5E-06 1.9E-10 60.8 8.1 72 74-156 21-101 (103)
337 3qmx_A Glutaredoxin A, glutare 98.2 3.7E-06 1.3E-10 61.1 7.0 60 73-140 14-78 (99)
338 3bj5_A Protein disulfide-isome 98.2 3.7E-05 1.3E-09 60.3 13.1 110 56-165 14-131 (147)
339 4eo3_A Bacterioferritin comigr 98.2 4.9E-06 1.7E-10 74.5 9.1 103 56-161 7-139 (322)
340 1fo5_A Thioredoxin; disulfide 98.2 1.1E-05 3.7E-10 56.7 9.1 79 286-373 6-85 (85)
341 1fov_A Glutaredoxin 3, GRX3; a 98.2 6.4E-06 2.2E-10 57.5 7.9 67 77-157 3-73 (82)
342 3sbc_A Peroxiredoxin TSA1; alp 98.2 3.8E-06 1.3E-10 69.9 7.6 88 72-159 51-179 (216)
343 1gh2_A Thioredoxin-like protei 98.2 8.3E-06 2.8E-10 60.2 8.9 95 272-373 8-106 (107)
344 3feu_A Putative lipoprotein; a 98.2 3.8E-06 1.3E-10 69.0 7.3 84 73-160 22-183 (185)
345 2rem_A Disulfide oxidoreductas 98.2 1.3E-05 4.5E-10 66.2 10.7 41 73-113 25-65 (193)
346 3gix_A Thioredoxin-like protei 98.2 4.8E-06 1.6E-10 65.8 7.3 98 273-375 11-122 (149)
347 3msz_A Glutaredoxin 1; alpha-b 98.1 5.8E-06 2E-10 58.8 6.6 74 75-160 4-86 (89)
348 1nho_A Probable thioredoxin; b 98.1 9.3E-06 3.2E-10 57.0 7.6 79 286-373 5-84 (85)
349 3rhb_A ATGRXC5, glutaredoxin-C 98.1 5.1E-06 1.8E-10 62.1 6.3 68 64-141 10-85 (113)
350 2ec4_A FAS-associated factor 1 98.1 2.9E-05 1E-09 62.7 10.9 90 71-160 53-167 (178)
351 1faa_A Thioredoxin F; electron 98.1 1.4E-05 4.7E-10 60.8 8.5 103 266-374 18-124 (124)
352 1ti3_A Thioredoxin H, PTTRXH1; 98.1 6.6E-06 2.2E-10 61.4 6.4 96 272-374 11-112 (113)
353 2khp_A Glutaredoxin; thioredox 98.1 7.4E-06 2.5E-10 58.7 6.4 57 76-140 7-67 (92)
354 1xfl_A Thioredoxin H1; AT3G510 98.1 1.3E-05 4.4E-10 61.0 8.0 95 272-373 23-123 (124)
355 1qgv_A Spliceosomal protein U5 98.0 1.7E-05 6E-10 61.9 8.1 97 273-375 11-122 (142)
356 3evi_A Phosducin-like protein 98.0 1.6E-05 5.6E-10 59.7 7.6 96 163-263 4-112 (118)
357 2vm1_A Thioredoxin, thioredoxi 98.0 1.6E-05 5.4E-10 59.7 7.3 97 272-375 13-115 (118)
358 2yj7_A LPBCA thioredoxin; oxid 97.2 8.7E-07 3E-11 65.3 0.0 100 268-372 3-105 (106)
359 3emx_A Thioredoxin; structural 98.0 7.6E-06 2.6E-10 63.4 5.0 102 268-375 18-127 (135)
360 3iv4_A Putative oxidoreductase 98.0 2.1E-05 7.3E-10 57.6 6.9 95 163-260 7-111 (112)
361 3h8q_A Thioredoxin reductase 3 98.0 1.5E-05 5E-10 59.7 6.2 67 64-140 8-81 (114)
362 3l9s_A Thiol:disulfide interch 97.9 1.9E-05 6.6E-10 65.0 7.3 40 73-112 21-63 (191)
363 2dj0_A Thioredoxin-related tra 97.9 1.9E-06 6.6E-11 67.0 0.9 100 267-369 8-116 (137)
364 3d22_A TRXH4, thioredoxin H-ty 97.9 2.5E-05 8.4E-10 60.7 7.2 97 272-375 31-133 (139)
365 2fwh_A Thiol:disulfide interch 97.9 0.0001 3.5E-09 56.8 10.6 99 162-263 11-126 (134)
366 1zma_A Bacterocin transport ac 97.9 2.2E-05 7.6E-10 59.0 6.4 102 267-370 13-117 (118)
367 2kuc_A Putative disulphide-iso 97.9 3.7E-05 1.3E-09 58.9 7.2 103 271-376 11-123 (130)
368 3tue_A Tryparedoxin peroxidase 97.8 0.00013 4.6E-09 60.7 10.7 88 72-159 55-183 (219)
369 2f51_A Thioredoxin; electron t 97.8 3.9E-05 1.3E-09 57.7 6.5 95 272-373 11-112 (118)
370 1wik_A Thioredoxin-like protei 97.8 5.8E-05 2E-09 55.9 7.0 67 64-140 6-81 (109)
371 3fk8_A Disulphide isomerase; A 97.8 7.9E-05 2.7E-09 57.3 7.9 91 283-373 29-132 (133)
372 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.0011 3.9E-08 63.6 17.5 171 73-263 18-198 (521)
373 3ctg_A Glutaredoxin-2; reduced 97.8 2.2E-05 7.4E-10 60.1 4.3 71 63-140 27-105 (129)
374 1wou_A Thioredoxin -related pr 97.7 4.5E-05 1.6E-09 57.8 5.4 98 268-371 7-122 (123)
375 2dbc_A PDCL2, unnamed protein 97.6 0.00016 5.3E-09 55.9 7.7 97 163-264 11-120 (135)
376 1wmj_A Thioredoxin H-type; str 97.6 1.9E-05 6.5E-10 60.5 2.4 101 268-375 16-123 (130)
377 3cxg_A Putative thioredoxin; m 97.6 6.3E-05 2.2E-09 57.9 5.3 100 268-375 22-130 (133)
378 1lu4_A Soluble secreted antige 97.6 0.00063 2.2E-08 52.1 10.6 88 283-373 24-135 (136)
379 2trc_P Phosducin, MEKA, PP33; 97.6 0.00016 5.6E-09 60.7 7.4 98 163-264 100-212 (217)
380 1zzo_A RV1677; thioredoxin fol 97.6 0.00063 2.2E-08 52.0 10.4 89 283-374 25-135 (136)
381 2b5x_A YKUV protein, TRXY; thi 97.5 0.00052 1.8E-08 53.4 9.5 91 283-375 29-146 (148)
382 3gha_A Disulfide bond formatio 97.5 0.00067 2.3E-08 56.3 10.5 88 72-164 28-195 (202)
383 3qcp_A QSOX from trypanosoma b 97.5 9.9E-05 3.4E-09 68.8 4.9 105 267-376 24-154 (470)
384 1a0r_P Phosducin, MEKA, PP33; 97.4 0.00058 2E-08 58.2 8.9 98 163-264 113-225 (245)
385 3or5_A Thiol:disulfide interch 97.4 0.0021 7.2E-08 51.0 11.2 92 283-376 34-153 (165)
386 2lst_A Thioredoxin; structural 96.4 3.2E-05 1.1E-09 59.3 0.0 93 281-376 17-118 (130)
387 3raz_A Thioredoxin-related pro 97.3 0.0027 9.4E-08 49.6 10.9 95 283-377 24-143 (151)
388 3l4n_A Monothiol glutaredoxin- 97.3 0.00063 2.1E-08 51.5 6.7 70 64-138 5-79 (127)
389 3f4s_A Alpha-DSBA1, putative u 97.2 0.0016 5.4E-08 54.9 9.7 92 72-163 38-213 (226)
390 1ilo_A Conserved hypothetical 97.2 0.0018 6.2E-08 43.9 8.4 72 286-369 3-76 (77)
391 2f9s_A Thiol-disulfide oxidore 97.2 0.0018 6E-08 50.7 9.1 93 283-377 26-141 (151)
392 2ju5_A Thioredoxin disulfide i 97.2 0.0013 4.3E-08 51.9 8.2 90 283-375 47-153 (154)
393 3erw_A Sporulation thiol-disul 97.1 0.0019 6.5E-08 49.9 8.6 86 282-370 33-145 (145)
394 2lja_A Putative thiol-disulfid 97.1 0.0026 9E-08 49.7 9.5 91 284-376 31-145 (152)
395 2l5o_A Putative thioredoxin; s 97.1 0.0035 1.2E-07 49.0 10.0 93 283-377 28-144 (153)
396 1xiy_A Peroxiredoxin, pfaop; a 97.1 0.0037 1.3E-07 50.6 10.0 87 72-158 42-179 (182)
397 3ha9_A Uncharacterized thiored 97.0 0.005 1.7E-07 48.9 10.4 89 283-375 37-165 (165)
398 3kp8_A Vkorc1/thioredoxin doma 97.0 0.0011 3.6E-08 48.6 5.1 73 181-262 13-92 (106)
399 2wci_A Glutaredoxin-4; redox-a 96.9 0.0011 3.6E-08 50.8 5.2 67 64-139 26-100 (135)
400 3fkf_A Thiol-disulfide oxidore 96.9 0.0087 3E-07 46.2 10.8 88 283-375 33-147 (148)
401 3ia1_A THIO-disulfide isomeras 96.9 0.0023 7.9E-08 50.2 7.3 87 286-376 34-146 (154)
402 3f9u_A Putative exported cytoc 96.8 0.0034 1.2E-07 50.4 7.8 89 281-374 45-166 (172)
403 2lrn_A Thiol:disulfide interch 96.8 0.0088 3E-07 46.7 9.9 90 283-377 29-144 (152)
404 3lor_A Thiol-disulfide isomera 96.7 0.0093 3.2E-07 46.9 9.6 91 283-375 30-156 (160)
405 3gl3_A Putative thiol:disulfid 96.7 0.011 3.7E-07 46.0 9.9 91 284-376 29-144 (152)
406 1sen_A Thioredoxin-like protei 96.7 0.0015 5.3E-08 52.0 4.8 92 281-375 44-149 (164)
407 4evm_A Thioredoxin family prot 96.7 0.01 3.5E-07 45.0 9.5 88 283-372 22-137 (138)
408 3lwa_A Secreted thiol-disulfid 96.7 0.01 3.5E-07 48.0 9.9 93 283-375 59-182 (183)
409 2h30_A Thioredoxin, peptide me 96.6 0.0021 7.1E-08 51.0 5.1 106 268-375 23-157 (164)
410 3hcz_A Possible thiol-disulfid 96.6 0.013 4.4E-07 45.3 9.6 84 283-372 31-141 (148)
411 1aba_A Glutaredoxin; electron 96.6 0.0053 1.8E-07 42.9 6.3 55 77-138 2-74 (87)
412 2axo_A Hypothetical protein AT 96.6 0.0028 9.5E-08 54.3 5.5 80 74-160 43-142 (270)
413 3zyw_A Glutaredoxin-3; metal b 96.5 0.0034 1.2E-07 46.3 5.2 64 65-138 8-80 (111)
414 3kcm_A Thioredoxin family prot 96.5 0.016 5.5E-07 45.1 9.5 92 283-376 28-145 (154)
415 3bci_A Disulfide bond protein 96.5 0.025 8.5E-07 45.9 10.8 39 72-110 10-51 (186)
416 3ipz_A Monothiol glutaredoxin- 96.5 0.0065 2.2E-07 44.6 6.5 64 65-138 10-82 (109)
417 3gx8_A Monothiol glutaredoxin- 96.5 0.0079 2.7E-07 45.0 6.9 65 65-138 8-83 (121)
418 2ywi_A Hypothetical conserved 96.5 0.01 3.4E-07 48.6 8.2 90 286-377 49-177 (196)
419 2fgx_A Putative thioredoxin; N 96.4 0.0096 3.3E-07 43.3 6.7 74 286-369 32-106 (107)
420 1ttz_A Conserved hypothetical 96.4 0.0061 2.1E-07 42.6 5.3 76 286-376 3-79 (87)
421 1t1v_A SH3BGRL3, SH3 domain-bi 96.3 0.0088 3E-07 42.4 6.0 55 77-139 4-70 (93)
422 3eyt_A Uncharacterized protein 96.3 0.018 6.1E-07 45.1 8.4 91 283-375 28-153 (158)
423 2ct6_A SH3 domain-binding glut 96.2 0.01 3.4E-07 43.7 6.3 56 76-139 9-82 (111)
424 1kng_A Thiol:disulfide interch 96.2 0.016 5.4E-07 45.3 7.9 88 283-374 42-152 (156)
425 3dml_A Putative uncharacterize 96.2 0.0047 1.6E-07 45.7 4.2 84 285-374 21-110 (116)
426 1nm3_A Protein HI0572; hybrid, 96.0 0.016 5.5E-07 49.3 7.4 58 74-139 169-229 (241)
427 2xhf_A Peroxiredoxin 5; oxidor 96.0 0.02 6.7E-07 45.7 7.3 74 72-145 41-151 (171)
428 2wem_A Glutaredoxin-related pr 96.0 0.011 3.9E-07 43.9 5.5 66 64-139 11-86 (118)
429 3hdc_A Thioredoxin family prot 96.0 0.054 1.9E-06 42.4 9.8 86 283-370 41-148 (158)
430 1jfu_A Thiol:disulfide interch 95.9 0.068 2.3E-06 43.1 10.6 95 283-377 60-183 (186)
431 2cvb_A Probable thiol-disulfid 95.8 0.024 8.2E-07 46.0 7.5 92 284-377 34-162 (188)
432 2b1k_A Thiol:disulfide interch 95.7 0.029 9.8E-07 44.5 7.3 88 282-374 50-160 (168)
433 2dlx_A UBX domain-containing p 95.7 0.053 1.8E-06 42.3 8.6 89 283-375 42-137 (153)
434 3u5r_E Uncharacterized protein 95.6 0.056 1.9E-06 45.1 9.0 90 286-377 62-190 (218)
435 3ira_A Conserved protein; meth 95.4 0.019 6.4E-07 45.9 5.1 96 273-373 29-143 (173)
436 3c7m_A Thiol:disulfide interch 95.4 0.025 8.4E-07 46.2 6.1 42 73-114 17-59 (195)
437 3ewl_A Uncharacterized conserv 95.4 0.064 2.2E-06 41.0 8.1 87 283-373 27-140 (142)
438 2hyx_A Protein DIPZ; thioredox 95.3 0.06 2E-06 48.5 8.5 91 283-375 82-200 (352)
439 1t4y_A Adaptive-response senso 95.3 0.33 1.1E-05 34.4 10.2 84 76-160 13-98 (105)
440 3kzq_A Putative uncharacterize 95.2 0.2 6.9E-06 41.3 11.1 42 120-161 162-203 (208)
441 3kh7_A Thiol:disulfide interch 95.0 0.11 3.9E-06 41.4 8.8 88 283-375 58-168 (176)
442 3ph9_A Anterior gradient prote 95.0 0.046 1.6E-06 42.6 6.0 76 172-250 36-120 (151)
443 2lrt_A Uncharacterized protein 94.7 0.18 6.1E-06 39.1 8.9 86 284-375 36-146 (152)
444 1i5g_A Tryparedoxin II; electr 94.5 0.19 6.4E-06 38.4 8.5 69 283-353 28-122 (144)
445 3s9f_A Tryparedoxin; thioredox 94.4 0.16 5.5E-06 40.1 8.2 69 283-354 48-143 (165)
446 1z6n_A Hypothetical protein PA 94.4 0.027 9.1E-07 44.8 3.4 79 286-372 58-141 (167)
447 1o8x_A Tryparedoxin, TRYX, TXN 94.3 0.16 5.6E-06 38.9 7.8 67 284-352 29-121 (146)
448 3fw2_A Thiol-disulfide oxidore 94.1 0.55 1.9E-05 36.0 10.6 87 283-374 33-148 (150)
449 1o73_A Tryparedoxin; electron 94.0 0.21 7.1E-06 38.1 7.7 68 284-353 29-122 (144)
450 2wul_A Glutaredoxin related pr 93.8 0.099 3.4E-06 38.6 5.2 66 63-138 10-85 (118)
451 2ggt_A SCO1 protein homolog, m 93.8 0.25 8.5E-06 38.6 8.1 90 283-374 23-161 (164)
452 2in3_A Hypothetical protein; D 93.6 0.11 3.7E-06 43.1 5.9 46 116-161 165-210 (216)
453 3dwv_A Glutathione peroxidase- 93.6 0.55 1.9E-05 37.8 10.0 93 283-375 46-184 (187)
454 3cmi_A Peroxiredoxin HYR1; thi 93.5 0.6 2.1E-05 36.8 10.0 89 283-374 32-168 (171)
455 2v1m_A Glutathione peroxidase; 93.4 0.44 1.5E-05 37.3 9.0 94 283-376 31-169 (169)
456 2p5q_A Glutathione peroxidase 93.4 0.74 2.5E-05 36.0 10.3 93 283-375 32-169 (170)
457 3kp9_A Vkorc1/thioredoxin doma 93.4 0.16 5.5E-06 44.2 6.6 78 171-262 190-277 (291)
458 1wjk_A C330018D20RIK protein; 93.3 0.12 4E-06 37.0 4.8 78 285-374 17-96 (100)
459 2bmx_A Alkyl hydroperoxidase C 93.2 0.38 1.3E-05 39.0 8.4 94 284-377 46-173 (195)
460 3eur_A Uncharacterized protein 93.0 0.28 9.5E-06 37.3 7.0 82 284-370 32-141 (142)
461 2rli_A SCO2 protein homolog, m 93.0 0.54 1.8E-05 36.9 8.9 92 284-375 27-165 (171)
462 2vup_A Glutathione peroxidase- 92.9 0.84 2.9E-05 36.7 10.1 91 283-375 48-186 (190)
463 1u6t_A SH3 domain-binding glut 92.5 0.28 9.6E-06 36.3 5.9 55 76-138 1-73 (121)
464 2jad_A Yellow fluorescent prot 92.3 0.12 4.3E-06 46.1 4.4 69 65-138 253-327 (362)
465 3gn3_A Putative protein-disulf 92.2 0.19 6.6E-06 40.4 5.2 41 72-112 13-54 (182)
466 4fo5_A Thioredoxin-like protei 92.1 0.46 1.6E-05 36.1 7.2 84 284-371 33-142 (143)
467 2obi_A PHGPX, GPX-4, phospholi 91.4 0.61 2.1E-05 37.3 7.5 40 283-322 47-89 (183)
468 3tdg_A DSBG, putative uncharac 91.3 0.16 5.5E-06 43.4 3.9 29 73-101 147-175 (273)
469 2p31_A CL683, glutathione pero 91.3 1.1 3.9E-05 35.6 9.0 90 284-373 50-180 (181)
470 2kok_A Arsenate reductase; bru 91.2 0.88 3E-05 33.6 7.5 43 77-125 7-56 (120)
471 3drn_A Peroxiredoxin, bacterio 91.2 0.86 2.9E-05 35.5 8.0 88 286-373 32-148 (161)
472 1zof_A Alkyl hydroperoxide-red 90.8 0.26 8.8E-06 40.1 4.7 105 283-389 33-174 (198)
473 3kij_A Probable glutathione pe 90.8 1.9 6.5E-05 34.2 9.9 93 283-375 38-171 (180)
474 2k8s_A Thioredoxin; dimer, str 90.6 0.15 5.2E-06 34.5 2.6 57 286-346 4-61 (80)
475 2e7p_A Glutaredoxin; thioredox 90.3 0.27 9.2E-06 35.9 4.0 84 172-263 12-106 (116)
476 1we0_A Alkyl hydroperoxide red 90.0 0.79 2.7E-05 36.7 6.9 91 284-374 32-157 (187)
477 3gmf_A Protein-disulfide isome 89.8 0.66 2.3E-05 38.1 6.3 42 72-113 14-58 (205)
478 2ls5_A Uncharacterized protein 88.9 0.07 2.4E-06 41.7 0.0 88 288-376 39-150 (159)
479 1xzo_A BSSCO, hypothetical pro 88.8 1.4 4.9E-05 34.5 7.5 93 284-376 34-174 (174)
480 2gs3_A PHGPX, GPX-4, phospholi 88.6 1.5 5.2E-05 35.0 7.7 39 284-322 50-91 (185)
481 1un2_A DSBA, thiol-disulfide i 88.5 0.18 6E-06 41.3 1.9 65 329-400 41-108 (197)
482 2f8a_A Glutathione peroxidase 88.2 2.8 9.6E-05 34.3 9.1 39 284-322 48-89 (208)
483 2k6v_A Putative cytochrome C o 88.1 0.71 2.4E-05 36.2 5.3 88 284-372 36-171 (172)
484 2x8g_A Thioredoxin glutathione 87.7 0.56 1.9E-05 45.6 5.2 67 64-140 9-82 (598)
485 1zye_A Thioredoxin-dependent p 87.6 1.4 4.7E-05 36.5 6.9 104 284-389 57-198 (220)
486 1xvw_A Hypothetical protein RV 87.3 1.9 6.5E-05 33.2 7.3 88 285-372 38-158 (160)
487 3ztl_A Thioredoxin peroxidase; 86.7 1.1 3.9E-05 37.1 5.9 105 283-390 69-212 (222)
488 2lus_A Thioredoxion; CR-Trp16, 86.7 0.13 4.4E-06 39.2 0.0 64 287-352 31-120 (143)
489 1uul_A Tryparedoxin peroxidase 86.5 1.2 4.2E-05 36.2 6.0 91 284-374 37-165 (202)
490 2jsy_A Probable thiol peroxida 86.4 4.9 0.00017 31.1 9.3 90 283-373 44-166 (167)
491 1ego_A Glutaredoxin; electron 86.0 1.7 5.7E-05 29.3 5.6 78 287-373 4-83 (85)
492 2b7k_A SCO1 protein; metalloch 85.9 2.5 8.5E-05 34.2 7.5 109 283-391 41-197 (200)
493 1z3e_A Regulatory protein SPX; 85.5 0.89 3.1E-05 34.2 4.2 34 77-116 3-36 (132)
494 2i81_A 2-Cys peroxiredoxin; st 85.1 2.5 8.4E-05 34.8 7.1 104 284-389 53-193 (213)
495 3gn3_A Putative protein-disulf 83.2 0.94 3.2E-05 36.3 3.7 37 118-156 145-181 (182)
496 2g2q_A Glutaredoxin-2; thiored 82.4 1.2 4.1E-05 32.1 3.4 36 74-113 2-37 (124)
497 3c7m_A Thiol:disulfide interch 81.0 0.83 2.8E-05 36.8 2.6 42 117-160 152-193 (195)
498 1v58_A Thiol:disulfide interch 80.9 3.1 0.00011 34.9 6.3 84 287-374 102-233 (241)
499 3gyk_A 27KDA outer membrane pr 80.9 6.3 0.00022 30.8 7.8 38 330-374 136-173 (175)
500 3gmf_A Protein-disulfide isome 80.3 1.8 6.2E-05 35.4 4.4 39 118-161 158-197 (205)
No 1
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=7.7e-49 Score=377.61 Aligned_cols=337 Identities=21% Similarity=0.342 Sum_probs=301.2
Q ss_pred CcEEcChhhHHHHHcCC---CcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEE
Q 015527 57 DVVSLNGKNFSEFMGKN---RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~---~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (405)
.++.|++++|++.+.++ ++++|+|||+||++|+++.|.|+++++.+++.+.|+.|||++++++|++|+|.++||+++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 81 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKI 81 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 57899999999999777 999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCeeeeeecCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhccCCeEEEEEEcCCCCccHHHHHHHh-ccCCcceEE
Q 015527 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFY 212 (405)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~~~f~ 212 (405)
|++|+.+.+|.|.++.+.|.+|+.+.+++++..+.+.++++.+++.++.++|+||.+.++...+.|..+| .+++++.|+
T Consensus 82 ~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~~~~~~F~ 161 (481)
T 3f8u_A 82 FRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFA 161 (481)
T ss_dssp EETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHHTTTSCEE
T ss_pred EeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHhccCceEE
Confidence 9999888999999999999999999999999999999999999999999999999988999999999988 678999999
Q ss_pred EecCHHHHhhcCCCCCCCCCeEEEee------cCCCcccccc-CCCCHHHHHHHHhccCCCCccccccccccccccCCcc
Q 015527 213 QTTSADVAEFFHIHPKSKRPALIFLH------LEAGKATPFR-HQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRK 285 (405)
Q Consensus 213 ~~~~~~l~~~~~~~~~~~~p~i~~~~------~~~~~~~~y~-g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~ 285 (405)
.+.+.+++++++++. +.+++|+ +.++....|+ |.++.++|.+||..++.|++.+++.+|+..+++. +
T Consensus 162 ~~~~~~~~~~~~v~~----~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~~--~ 235 (481)
T 3f8u_A 162 HTNVESLVNEYDDNG----EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK--D 235 (481)
T ss_dssp EECCHHHHHHHCSSS----EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTTS--S
T ss_pred EECCHHHHHHhCCCC----CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHHHhcCC--C
Confidence 999999999999984 6688898 4456778998 7899999999999999999999999999998865 4
Q ss_pred EEEEEecCC--Cc----HHHHHHHHHHHHHhcCc---EEEEEEEcCCcchhhhhhhhcCCC--CCCCcEEEEEeCCCccc
Q 015527 286 QLWLFAPAY--GS----DKVILTFEEVAKALKGK---LLHVYVEMNSEGVGRRVSQEFGVS--GNAPRVIAYSARDAKKY 354 (405)
Q Consensus 286 ~~i~f~~~~--~~----~~~~~~~~~va~~~~~~---~~f~~id~~~~~~~~~~~~~~gi~--~~~~p~i~i~~~~~~~y 354 (405)
++++|...+ .. +.+...++++|++++++ +.|+++|+..+. +.++.||++ ....|.+++.+.++.+|
T Consensus 236 ~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~---~~l~~~gl~~~~~~~P~~~i~~~~~~ky 312 (481)
T 3f8u_A 236 LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFS---HELSDFGLESTAGEIPVVAIRTAKGEKF 312 (481)
T ss_dssp EEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTH---HHHGGGTCCCCTTCSCEEEEECSSSCEE
T ss_pred ceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHHH---HHHHHcCCCcccCCCcEEEEEcCCCccc
Confidence 455554332 21 23578899999999988 999999998754 678999998 34689999998778899
Q ss_pred cCCCCCCHH--HHHHHHHHHhcCce--eeecccCchh----hhcCccCcccceeee
Q 015527 355 VLNGELTLS--SIKSFGEEFLEDKL--LNQSDQISET----ILKLPSQSRASYQLR 402 (405)
Q Consensus 355 ~~~~~~~~~--~l~~Fi~~~~~Gkl--~~kse~iPe~----~~~~~~~~~~~~~~~ 402 (405)
.|+++++.+ +|.+|++++++|++ +++|+++|+. +..+++++|++.+..
T Consensus 313 ~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~ 368 (481)
T 3f8u_A 313 VMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNN 368 (481)
T ss_dssp ECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTC
T ss_pred CCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhc
Confidence 999999999 99999999999999 8999999975 777788888876654
No 2
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=1.9e-48 Score=360.16 Aligned_cols=315 Identities=14% Similarity=0.207 Sum_probs=279.5
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhH------HHHHHHHHHccC-CcEEEEEeCcccHhHHHhCCCc
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLA------PEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL 126 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~------~~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i~ 126 (405)
....++.|+.++|++.+.++++++|.|||+||+||+... |.++++++.+++ ++.|+.|||++++++|++|+|+
T Consensus 11 ~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~ 90 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLT 90 (367)
T ss_dssp CCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCC
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCC
Confidence 446799999999999998899999999999999974433 689999999877 6999999999999999999999
Q ss_pred ccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhc-cCCeEEEEEEcCCCCccHHHHHHHh-c
Q 015527 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILT-VESKLVLGFLHDLEGMESEELAAAS-K 204 (405)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~-~~~~~~v~f~~~~~~~~~~~~~~~a-~ 204 (405)
++||+++|++|+. ..|.|.++.+.|.+|+.+.+++++..+.+.++++.+++ .++.++|+||.+++++..+.|..+| .
T Consensus 91 ~~PTl~~f~~G~~-~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f~~~A~~ 169 (367)
T 3us3_A 91 EEDSIYVFKEDEV-IEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAFKEAAEE 169 (367)
T ss_dssp STTEEEEEETTEE-EECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHHHHHHHH
T ss_pred cCceEEEEECCcE-EEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHHHHHHHh
Confidence 9999999999954 69999999999999999999999999999999999998 6788999999999999999999988 6
Q ss_pred cCCcceEEEecCHHHHhhcCCCCCCCCCeEEEeecCCCccccccCC-CCHHHHHHHHhccCCCCccccccccccccccCC
Q 015527 205 LHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-FTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDP 283 (405)
Q Consensus 205 ~~~~~~f~~~~~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~-~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~ 283 (405)
+.+++.|+.+++..++++++++. |+|++|++.++.+..|+|. ++.++|.+||..++.|++.+++.+|+..++...
T Consensus 170 ~~~~~~F~~~~~~~~~~~~~v~~----p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~ 245 (367)
T 3us3_A 170 FHPYIPFFATFDSKVAKKLTLKL----NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDD 245 (367)
T ss_dssp HTTTSCEEEECCHHHHHHHTCCT----TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHHHHHSC
T ss_pred hcCCcEEEEECCHHHHHHcCCCC----CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHHHHhhc
Confidence 78899999999999999999984 9999999877788999995 899999999999999999999999988887753
Q ss_pred c--cEEEEEecCCC--cHHHHHHHHHHHHHhcC--cEEEEEEEcCCcchhhhh----hhhcCCCCCCCcEEEEEeC-CC-
Q 015527 284 R--KQLWLFAPAYG--SDKVILTFEEVAKALKG--KLLHVYVEMNSEGVGRRV----SQEFGVSGNAPRVIAYSAR-DA- 351 (405)
Q Consensus 284 ~--~~~i~f~~~~~--~~~~~~~~~~va~~~~~--~~~f~~id~~~~~~~~~~----~~~~gi~~~~~p~i~i~~~-~~- 351 (405)
. +++++|.+..+ ++++.+.++++|+++++ ++.|+|+|+..+. .. .+.||++ ...|++++.+. ++
T Consensus 246 ~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~---~~l~~~~~~fgl~-~~~P~~~i~~~~~~~ 321 (367)
T 3us3_A 246 MDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFP---LLVPYWEKTFDID-LSAPQIGVVNVTDAD 321 (367)
T ss_dssp BTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCT---TTHHHHHHHHTCC-TTSCEEEEEETTTCC
T ss_pred cCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccch---hHHHHHHHhcCCC-CCCCeEEEEeccccc
Confidence 2 56777777543 57888999999999998 7999999999754 33 3569998 35899999987 44
Q ss_pred -ccccCCC---CCCHHHHHHHHHHHhcCce
Q 015527 352 -KKYVLNG---ELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 352 -~~y~~~~---~~~~~~l~~Fi~~~~~Gkl 377 (405)
++|.+++ .+|.++|.+|++++++|++
T Consensus 322 ~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl 351 (367)
T 3us3_A 322 SVWMEMDDEEDLPSAEELEDWLEDVLEGEI 351 (367)
T ss_dssp EEECCCCTTSCCCCHHHHHHHHHHHHHTSS
T ss_pred ceeecCCcccccCCHHHHHHHHHHHHcCCc
Confidence 5777764 7999999999999999998
No 3
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.1e-49 Score=367.34 Aligned_cols=322 Identities=20% Similarity=0.282 Sum_probs=252.7
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHcc------CCcEEEEEeCcccHhHHHhCCCcccc
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK------GEADLVMVDAYLEKDLAKEYNILAYP 129 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~------~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (405)
..++.|++++|+..+.++++++|.|||+||++|+.+.|.|+++++.++ +++.|+.|||+.++++|++|+|.++|
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 458889999999999888999999999999999999999999999983 36999999999999999999999999
Q ss_pred eEEEEeCCeeee-eecCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhccCCeEEEEEEcCCCCccHHHHHHHh-ccCC
Q 015527 130 TLYLFVAGVRQF-QFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHS 207 (405)
Q Consensus 130 t~~~~~~g~~~~-~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~~~~~~~~~a-~~~~ 207 (405)
|+++|++|+... .|.|.++.+.|.+|+.+.+++++..+.+.++++. +..+..++|+||.+.+++..+.|..+| .+++
T Consensus 85 t~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~~~f~~~A~~~~~ 163 (382)
T 2r2j_A 85 TLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVANILHD 163 (382)
T ss_dssp EEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhHHHHHHHHHHhhc
Confidence 999999997766 5999999999999999999999999988888888 677788999999998888889999988 6778
Q ss_pred cceEEEecCHHHHhhcCCCCCCCCCeEEEeecC--CCccccccCCC-CHHHHHHHHhccCCCCccccccccccccccCCc
Q 015527 208 DVNFYQTTSADVAEFFHIHPKSKRPALIFLHLE--AGKATPFRHQF-TRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPR 284 (405)
Q Consensus 208 ~~~f~~~~~~~l~~~~~~~~~~~~p~i~~~~~~--~~~~~~y~g~~-~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~ 284 (405)
++.|+.+.+ ++.+.++++. .| + +|+.. +.....|+|.+ +.++|.+||..++.|++.+++.+++..++..+.
T Consensus 164 ~~~F~~~~~-~~~~~~~v~~---~p-i-~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~ 237 (382)
T 2r2j_A 164 DCAFLSAFG-DVSKPERYSG---DN-I-IYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGL 237 (382)
T ss_dssp TCEEEEEES-CC-----------CE-E-EEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHTTCC
T ss_pred cceEEEEeh-hhHHhhCCCC---Cc-e-EECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHHHhcCCC
Confidence 999998887 6788888874 67 4 55553 23568899998 889999999999999999999999999988888
Q ss_pred cEEEEEecCCC---cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCC---C
Q 015527 285 KQLWLFAPAYG---SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLN---G 358 (405)
Q Consensus 285 ~~~i~f~~~~~---~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~---~ 358 (405)
+++++|....+ .+.+...+.++|.++++++.|+|+|+.... ++++.||++....|++++.+. +..|.|. +
T Consensus 238 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~---~~~~~~gl~~~~~P~i~i~~~-~~~y~~~~~~~ 313 (382)
T 2r2j_A 238 PFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFR---HPLLHIQKTPADCPVIAIDSF-RHMYVFGDFKD 313 (382)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTH---HHHHHTTCCGGGCSEEEEECS-SCEEECCCSGG
T ss_pred cEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhH---HHHHHcCCCccCCCEEEEEcc-hhcCCCCcccc
Confidence 88787776543 345666677778888999999999999754 778999998777899999875 3335543 3
Q ss_pred CCCHHHHHHHHHHHhcCce--eeecccCchhh
Q 015527 359 ELTLSSIKSFGEEFLEDKL--LNQSDQISETI 388 (405)
Q Consensus 359 ~~~~~~l~~Fi~~~~~Gkl--~~kse~iPe~~ 388 (405)
.++.++|.+|++++++|++ ++||||+|++.
T Consensus 314 ~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~~ 345 (382)
T 2r2j_A 314 VLIPGKLKQFVFDLHSGKLHREFHHGPDPTDT 345 (382)
T ss_dssp GGSTTHHHHHHHHHHHTTTSSCC---------
T ss_pred ccCHHHHHHHHHHHHCCCccccccCCCCCCCC
Confidence 5678999999999999999 99999999873
No 4
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=3.3e-47 Score=350.65 Aligned_cols=314 Identities=18% Similarity=0.239 Sum_probs=278.8
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHH-------HHHHHHHccC-CcEEEEEeCcccHhHHHhCCC
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPE-------FAAAAKMLKG-EADLVMVDAYLEKDLAKEYNI 125 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~-------~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i 125 (405)
....++.|++++|++.+.++++++|+|||+||+ |+.++|. |+++++.+++ ++.++.|||++++++|++|+|
T Consensus 9 ~~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v 87 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGF 87 (350)
T ss_dssp CCCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTC
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCC
Confidence 345689999999999998899999999999999 9999999 9999999987 699999999999999999999
Q ss_pred cccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhc-cCCeEEEEEEcCCCCccHHHHHHHh-
Q 015527 126 LAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILT-VESKLVLGFLHDLEGMESEELAAAS- 203 (405)
Q Consensus 126 ~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~-~~~~~~v~f~~~~~~~~~~~~~~~a- 203 (405)
.++||+++|++|+ ..+|.|.++.+.|.+|+.+.+++++..+.+.++++.+++ .++.++|+||.+++++..+.|.++|
T Consensus 88 ~~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~~~~A~ 166 (350)
T 1sji_A 88 DEEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAFEEAAE 166 (350)
T ss_dssp CSTTEEEEEETTE-EEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHHHHHHH
T ss_pred CccceEEEEECCc-EEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHHHHHHH
Confidence 9999999999996 779999999999999999999999999999999999998 7788999999999999999999988
Q ss_pred ccCCcceEEEecCHHHHhhcCCCCCCCCCeEEEeecCCCccccccCC-CCHHHHHHHHhccCCCCccccccccccccccC
Q 015527 204 KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-FTRLAIANFVTHTKHPLVVTLTIHNAQFVFQD 282 (405)
Q Consensus 204 ~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~-~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~ 282 (405)
.+++++.|+.+.+.+++++++++ .|++++|++.++.+..|+|. ++.++|.+||..++.|++.++|.+++..+++.
T Consensus 167 ~~~~~~~f~~~~~~~~~~~~~v~----~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~ 242 (350)
T 1sji_A 167 HFQPYIKFFATFDKGVAKKLSLK----MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWED 242 (350)
T ss_dssp HTTTTSEEEEECCHHHHHHHTCC----TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHHHHHHS
T ss_pred hhccCcEEEEECCHHHHHHcCCC----CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHHHHhcC
Confidence 57799999999999999999998 59999999876778899998 89999999999999999999999999999886
Q ss_pred Cc-c-EEEEEecCCC--cHHHHHHHHHHHHHhcC--cEEEEEEEcCCcchhhhhh----hhcCCCCCCCcEEEEEeC-CC
Q 015527 283 PR-K-QLWLFAPAYG--SDKVILTFEEVAKALKG--KLLHVYVEMNSEGVGRRVS----QEFGVSGNAPRVIAYSAR-DA 351 (405)
Q Consensus 283 ~~-~-~~i~f~~~~~--~~~~~~~~~~va~~~~~--~~~f~~id~~~~~~~~~~~----~~~gi~~~~~p~i~i~~~-~~ 351 (405)
+. + .+++|....+ ++++.+.++++|+++++ ++.|+|+|++.+. .++ +.||++. ..|++++++. ++
T Consensus 243 ~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~---~~~~~~~~~~gi~~-~~P~~~i~~~~~~ 318 (350)
T 1sji_A 243 DLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFP---LLVAYWEKTFKIDL-FKPQIGVVNVTDA 318 (350)
T ss_dssp CSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCH---HHHHHHHHHCCSCT-TSCEEEEEESSSS
T ss_pred CCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhH---HHHHHHHhhcCCCc-cCCcEEEEecccc
Confidence 43 2 3444655433 56889999999999987 8999999998653 566 7899983 5799999987 55
Q ss_pred cccc--CC---CCCCHHHHHHHHHHHhcCce
Q 015527 352 KKYV--LN---GELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 352 ~~y~--~~---~~~~~~~l~~Fi~~~~~Gkl 377 (405)
.+|. ++ +.++.++|.+|++++++|++
T Consensus 319 ~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 319 DSVWMEIPDDDDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp CEEESCSSCCSCCCCHHHHHHHHHHHHTSCC
T ss_pred cccccCCCcccccCCHHHHHHHHHHHhcCcc
Confidence 5565 44 48999999999999999986
No 5
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=7.9e-46 Score=358.36 Aligned_cols=333 Identities=19% Similarity=0.271 Sum_probs=293.7
Q ss_pred ccCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcccHhHHHhCCCcccceE
Q 015527 53 LYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 53 ~~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (405)
.....++.+++++|++.+.++++++|.|||+||++|+.+.|.|+++++.+++ ++.|+.|||+.++++|++|+|.++||+
T Consensus 11 ~~~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 90 (504)
T 2b5e_A 11 PEDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSL 90 (504)
T ss_dssp CTTSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEE
Confidence 3456799999999999999999999999999999999999999999999988 599999999999999999999999999
Q ss_pred EEEeCCee--eeeecCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhccCC--eEEEEEEcCCCCccHHHHHHHh-ccC
Q 015527 132 YLFVAGVR--QFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVES--KLVLGFLHDLEGMESEELAAAS-KLH 206 (405)
Q Consensus 132 ~~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~--~~~v~f~~~~~~~~~~~~~~~a-~~~ 206 (405)
++|++|+. ..+|.|.++.+.|.+|+.+.+++++..+++ ++.+++..+ ..+|+||.+.++.....|..+| .++
T Consensus 91 ~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~~A~~~~ 167 (504)
T 2b5e_A 91 KIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHF 167 (504)
T ss_dssp EEEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHHHHHHHHHHTT
T ss_pred EEEeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHHHHHHHHHHhh
Confidence 99999976 889999999999999999999999999977 888888777 8888999887788889999988 677
Q ss_pred CcceEEEecCHHHHhhcCCCCCCCCCeEEEeecCCCccccccCC-C---CHHHHHHHHhccCCCCccccccccccccccC
Q 015527 207 SDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-F---TRLAIANFVTHTKHPLVVTLTIHNAQFVFQD 282 (405)
Q Consensus 207 ~~~~f~~~~~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~-~---~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~ 282 (405)
+++.|+.+. +++++++++ +++|++.+ ....|+|+ + +.++|.+||..+..|++.++|.+++..+++.
T Consensus 168 ~~~~F~~~~--~~~~~~~~~-------i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~ 237 (504)
T 2b5e_A 168 NDYDFVSAE--NADDDFKLS-------IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVES 237 (504)
T ss_dssp TTCEEEEEE--CTTSCCEEE-------EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHT
T ss_pred cCcEEEEEH--HHHHhcCCe-------EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcC
Confidence 999999887 566666652 77787755 77889998 7 8899999999999999999999999999998
Q ss_pred CccEEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeC-CCccccCC--C
Q 015527 283 PRKQLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLN--G 358 (405)
Q Consensus 283 ~~~~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~-~~~~y~~~--~ 358 (405)
+.++++++....+ .+.+...++++|+++++++.|+|+|+.... ++++.||+ ....|++++++. ++.+|.+. +
T Consensus 238 ~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~~~~---~~~~~~gl-~~~~P~v~i~~~~~~~ky~~~~~~ 313 (504)
T 2b5e_A 238 GLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDARKFG---RHAGNLNM-KEQFPLFAIHDMTEDLKYGLPQLS 313 (504)
T ss_dssp TSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEHHHHT---THHHHTTC-CSCSSEEEEEETTTTEEEECCCCC
T ss_pred CCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEehhhhH---HHHHHcCC-cccCCEEEEEeCCcCcccCCCCCc
Confidence 8887777765432 467888999999999999999999998643 78999999 667899999988 77788886 5
Q ss_pred C-----------CCHHHHHHHHHHHhcCce--eeecccCchh----hhcCccCcccceeee
Q 015527 359 E-----------LTLSSIKSFGEEFLEDKL--LNQSDQISET----ILKLPSQSRASYQLR 402 (405)
Q Consensus 359 ~-----------~~~~~l~~Fi~~~~~Gkl--~~kse~iPe~----~~~~~~~~~~~~~~~ 402 (405)
+ ++.+.|..|+.+++.|++ ..+|+++|+. +..+.+++|++.++.
T Consensus 314 ~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~ 374 (504)
T 2b5e_A 314 EEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVND 374 (504)
T ss_dssp HHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHC
T ss_pred cchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhcc
Confidence 5 899999999999999999 8899999964 667788888876654
No 6
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=1.1e-35 Score=301.94 Aligned_cols=315 Identities=16% Similarity=0.228 Sum_probs=257.6
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEE
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (405)
....+..++.++|++.+.++++++|+|||+||++|+.+.|.|+++++.+++.+.|+.|||++++++|++|+|.++||+++
T Consensus 114 ~~~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 193 (780)
T 3apo_A 114 DDPEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFI 193 (780)
T ss_dssp TCTTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------CEEEE
T ss_pred CCcceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEE
Confidence 45678999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCeeeeeecCCCCHHHHHHHHHhhhcCCccccCCh---hHHHHHhccCCeEEEEEEcCCCC-ccHHHHHHHh-cc---
Q 015527 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTT---DEAERILTVESKLVLGFLHDLEG-MESEELAAAS-KL--- 205 (405)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~---~~~~~~l~~~~~~~v~f~~~~~~-~~~~~~~~~a-~~--- 205 (405)
|++|+.+.+|.|.++.+.|.+|+.+.+++++..+.+. ++++.++..+.+++++|+..... +....+..++ .+
T Consensus 194 ~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~ 273 (780)
T 3apo_A 194 FRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGL 273 (780)
T ss_dssp ECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHHHHTTTT
T ss_pred EeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHHHHhhcc
Confidence 9999888999999999999999999999999999877 68888887788888888765431 2222222221 11
Q ss_pred --------------------------------------------------------------------------------
Q 015527 206 -------------------------------------------------------------------------------- 205 (405)
Q Consensus 206 -------------------------------------------------------------------------------- 205 (405)
T Consensus 274 ~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~~ 353 (780)
T 3apo_A 274 VNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHR 353 (780)
T ss_dssp EEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTSE
T ss_pred ceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhccCC
Confidence
Q ss_pred -------------------------C-CcceEEEe---cCHHHHhhcCCCCCCCCCeEEEeecCC-CccccccCCCCHHH
Q 015527 206 -------------------------H-SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEA-GKATPFRHQFTRLA 255 (405)
Q Consensus 206 -------------------------~-~~~~f~~~---~~~~l~~~~~~~~~~~~p~i~~~~~~~-~~~~~y~g~~~~~~ 255 (405)
. ..+.|+.+ .+..+++.++++ .|+++++++.+ +.+..|.|..+.++
T Consensus 354 ~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~----~p~i~l~~~~~~e~~~~~~g~~~~~~ 429 (780)
T 3apo_A 354 WLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVF----QPSLAVFKGQGTKEYEIHHGKKILYD 429 (780)
T ss_dssp EEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCC----SCEEEEEESSTTSSEEECCSCCCHHH
T ss_pred eEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhcccc----CChhhhccCCCcceeeecccHhhHHH
Confidence 1 23455554 455688888887 39999999865 45778999999999
Q ss_pred HHHHHhccCCCCccccccccccccccCCccE-EEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhh
Q 015527 256 IANFVTHTKHPLVVTLTIHNAQFVFQDPRKQ-LWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQE 333 (405)
Q Consensus 256 l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~~-~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~ 333 (405)
|.+|+..+..|.+.+++.+++..+ .+.++ +.+|++||. |....+.|+++|+++++++.|+.+|+++.. .+++.
T Consensus 430 i~~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~---~~~~~ 504 (780)
T 3apo_A 430 ILAFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHE---GLCNM 504 (780)
T ss_dssp HHHHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHH
T ss_pred HHHHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCH---HHHHH
Confidence 999999999999999999999887 34444 446667887 899999999999999999999999999754 88999
Q ss_pred cCCCCCCCcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhcCce-eee
Q 015527 334 FGVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL-LNQ 380 (405)
Q Consensus 334 ~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~Gkl-~~k 380 (405)
||+.. .|.+++++. |..+.+.|..+.++|.+|+++++++.+ .+.
T Consensus 505 ~~v~~--~Pt~~~~~~-g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~ 549 (780)
T 3apo_A 505 YNIQA--YPTTVVFNQ-SSIHEYEGHHSAEQILEFIEDLRNPSVVSLT 549 (780)
T ss_dssp TTCCS--SSEEEEEET-TEEEEECSCSCHHHHHHHHHHHHSCSEEECC
T ss_pred cCCCc--CCeEEEEcC-CceeeecCcccHHHHHHHHHhhcccceeecC
Confidence 99976 788888864 566888999999999999999999876 443
No 7
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=4.1e-34 Score=290.50 Aligned_cols=308 Identities=18% Similarity=0.241 Sum_probs=261.3
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
..+.++++++|+.. .+++++|.|||+||++|+.++|.|+++++.+++++.|+.|||++++.+++.|||.++||+++++
T Consensus 440 ~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 517 (780)
T 3apo_A 440 SHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFN 517 (780)
T ss_dssp SCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEEEc
Confidence 45788899888876 7889999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhcc---CCeEEEEEEcCCCCc---cHHHHHHHh-ccCCc
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTV---ESKLVLGFLHDLEGM---ESEELAAAS-KLHSD 208 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~---~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~ 208 (405)
+|+. .+|.|.++.+.|.+|+.+.+.+++..++ .+.++.++.. +..++|.|+++||++ ..+.|.++| .+.+.
T Consensus 518 ~g~~-~~~~g~~~~~~l~~fi~~~~~~~v~~l~-~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~ 595 (780)
T 3apo_A 518 QSSI-HEYEGHHSAEQILEFIEDLRNPSVVSLT-PSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL 595 (780)
T ss_dssp TTEE-EEECSCSCHHHHHHHHHHHHSCSEEECC-HHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred CCce-eeecCcccHHHHHHHHHhhcccceeecC-cccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC
Confidence 8854 8899999999999999999999998885 6788888765 467899999999887 556677888 56778
Q ss_pred ceEEEe---cCHHHHhhcCCCCCCCCCeEEEeecCCC---ccccccC-CCCHHHHHHHHhccCCCCccccccccccc-cc
Q 015527 209 VNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAG---KATPFRH-QFTRLAIANFVTHTKHPLVVTLTIHNAQF-VF 280 (405)
Q Consensus 209 ~~f~~~---~~~~l~~~~~~~~~~~~p~i~~~~~~~~---~~~~y~g-~~~~~~l~~fi~~~~~p~v~~l~~~~~~~-~~ 280 (405)
+.|+.+ .+..+++.++++. +|++++|+.++. .+..|+| .++.++|.+|+..+..|.+.+++.+++.. +.
T Consensus 596 v~~~~vd~~~~~~l~~~~~v~~---~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~ 672 (780)
T 3apo_A 596 INVGSVDCGQYHSFCTQENVQR---YPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKVL 672 (780)
T ss_dssp SEEEEEETTTTHHHHHHTTCCS---SSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHTT
T ss_pred eEEEEEECcchHHHHHHcCCCC---CCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHHh
Confidence 999876 4556889999984 999999987653 3677999 78999999999999999999999999865 45
Q ss_pred cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCC
Q 015527 281 QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNG 358 (405)
Q Consensus 281 ~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~ 358 (405)
..+.++++ ++++||. |+...+.+.++|+++++++.|+.+|++... .+++.||+.. .|.++++..+.....+.|
T Consensus 673 ~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~---~~~~~~~v~~--~Pt~~~~~~g~~~~~~~G 747 (780)
T 3apo_A 673 QGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYP---QTCQKAGIKA--YPSVKLYQYERAKKSIWE 747 (780)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH---HHHHHTTCCS--SSEEEEEEEETTTTEEEE
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCH---HHHHhcCCCc--CCEEEEEcCCCccccccC
Confidence 55556555 5567887 999999999999999999999999999754 8889999974 788888754333333333
Q ss_pred ----CCCHHHHHHHHHHHhcC
Q 015527 359 ----ELTLSSIKSFGEEFLED 375 (405)
Q Consensus 359 ----~~~~~~l~~Fi~~~~~G 375 (405)
..+.+.|.+||+..+..
T Consensus 748 ~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 748 EQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp EEECCCCHHHHHHHHHHHTTC
T ss_pred cccCCcCHHHHHHHHHHHHHH
Confidence 68999999999999864
No 8
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-32 Score=242.53 Aligned_cols=223 Identities=20% Similarity=0.324 Sum_probs=191.4
Q ss_pred CccCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc--ccHhHHHhCCCccc
Q 015527 52 LLYAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAY 128 (405)
Q Consensus 52 ~~~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~i~~~ 128 (405)
......+++|+.++|++.+ ..+++++|+|||+||++|+.+.|.|+++++.+++.+.++.|||+ +++++|++|+|.++
T Consensus 13 ~~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 13 YDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp CSSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc
Confidence 3455688999999999998 56789999999999999999999999999999888999999998 68999999999999
Q ss_pred ceEEEEeCCe-----------------eeeeecCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhccCCeEEEEEEcCC
Q 015527 129 PTLYLFVAGV-----------------RQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDL 191 (405)
Q Consensus 129 Pt~~~~~~g~-----------------~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~ 191 (405)
||+++|++|+ ....|.|.++.+.|.+|+.+.+++.+..+.+.++++.+++..+...+++|..
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~- 171 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSK- 171 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEES-
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcC-
Confidence 9999999885 3688999999999999999999999999999999999998864444445533
Q ss_pred CCccHHHHHHHh-ccCCcceEEEecCHHHHhhcCC-----C---------------CCCCCCeEEEeecCCCccccccC-
Q 015527 192 EGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHI-----H---------------PKSKRPALIFLHLEAGKATPFRH- 249 (405)
Q Consensus 192 ~~~~~~~~~~~a-~~~~~~~f~~~~~~~l~~~~~~-----~---------------~~~~~p~i~~~~~~~~~~~~y~g- 249 (405)
.+...+.|..+| .+.+++.|+.+.+.+++..+++ + .....|+|++|+..++.+..|+|
T Consensus 172 ~~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~ 251 (298)
T 3ed3_A 172 QDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGN 251 (298)
T ss_dssp SSSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCS
T ss_pred CCcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccc
Confidence 456778999988 6889999999988877744421 0 00137999999988889999996
Q ss_pred CCCHHHHHHHHh--ccCCCCcccccccc
Q 015527 250 QFTRLAIANFVT--HTKHPLVVTLTIHN 275 (405)
Q Consensus 250 ~~~~~~l~~fi~--~~~~p~v~~l~~~~ 275 (405)
.++.++|.+||. .+..|++.+++..+
T Consensus 252 ~~~~~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 252 SINKNDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp SCCHHHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred cCCHHHHHHHHHhhcCCCCCcCCCchHH
Confidence 589999999999 89999999999765
No 9
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.5e-32 Score=235.65 Aligned_cols=227 Identities=15% Similarity=0.236 Sum_probs=182.7
Q ss_pred hhhcCCccccCChhHHHHHhccCCeEEEEEEcCCCCccHHHHHHHh-ccCCcceEEEecCHHHHhhcCCCCCCCCCeEEE
Q 015527 158 EKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (405)
Q Consensus 158 ~~~~~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~i~~ 236 (405)
++++|++..|++.++++.+++.++.++|+||.+++++.++.|.++| .+++++.|+++++.+++++++++. |+|++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~~~~~~----p~i~~ 77 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNG----EGIIL 77 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEECCHHHHHHHCSSS----EEEEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEChHHHHHHhCCCC----CcEEE
Confidence 4678999999999999999999999999999999999999999999 677999999999999999999983 99999
Q ss_pred eec------CCCccccc-cCCCCHHHHHHHHhccCCCCccccccccccccccCCccEEEEEecCC--C----cHHHHHHH
Q 015527 237 LHL------EAGKATPF-RHQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRKQLWLFAPAY--G----SDKVILTF 303 (405)
Q Consensus 237 ~~~------~~~~~~~y-~g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~~~i~f~~~~--~----~~~~~~~~ 303 (405)
|+. .++....| +|+++.++|.+||..+++|++.++|.+|+..++.. |++++|...+ . .+.+...+
T Consensus 78 fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~ 155 (252)
T 2h8l_A 78 FRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRV 155 (252)
T ss_dssp ECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSSS--SEEEEEECCBTTTBHHHHHHHHHHH
T ss_pred EcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcCC--CeEEEEeecchhhcchhHHHHHHHH
Confidence 985 23567889 99999999999999999999999999999998554 4455554321 1 23588889
Q ss_pred HHHHHHhcCc---EEEEEEEcCCcchhhhhhhhcCC--CCCCCcEEEEEeCCCccccCCCCCCHHH--HHHHHHHHhcCc
Q 015527 304 EEVAKALKGK---LLHVYVEMNSEGVGRRVSQEFGV--SGNAPRVIAYSARDAKKYVLNGELTLSS--IKSFGEEFLEDK 376 (405)
Q Consensus 304 ~~va~~~~~~---~~f~~id~~~~~~~~~~~~~~gi--~~~~~p~i~i~~~~~~~y~~~~~~~~~~--l~~Fi~~~~~Gk 376 (405)
+++|++++++ +.|+|+|+..+. ++++.||+ +....|++++.+.++.+|.|+++++.+. |.+|++++++|+
T Consensus 156 ~~vA~~~~~k~~~~~F~~~d~~~~~---~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~~~i~~F~~~~~~Gk 232 (252)
T 2h8l_A 156 MMVAKKFLDAGHKLNFAVASRKTFS---HELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGN 232 (252)
T ss_dssp HHHHHHHHHTTCCCEEEEEETTTTH---HHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTTSHHHHHHHHHHHHTC
T ss_pred HHHHHHccccCceEEEEEEchHHHH---HHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcchHHHHHHHHHHHCCC
Confidence 9999999987 999999998654 68899999 5567899999977778999988999999 999999999999
Q ss_pred e--eeecccCchhhhcCccC
Q 015527 377 L--LNQSDQISETILKLPSQ 394 (405)
Q Consensus 377 l--~~kse~iPe~~~~~~~~ 394 (405)
+ ++||||||++ +.++++
T Consensus 233 l~~~~kSe~iPe~-~~~pV~ 251 (252)
T 2h8l_A 233 LKRYLKSEPIPES-NDGAAA 251 (252)
T ss_dssp SCCCC---------------
T ss_pred ccccccCCCCCCC-CCCCCC
Confidence 9 8999999999 777765
No 10
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.98 E-value=1.5e-31 Score=233.79 Aligned_cols=225 Identities=17% Similarity=0.228 Sum_probs=182.9
Q ss_pred hhcCCccccCChhHHHHHhcc-CCeEEEEEEcCCCCccHHHHHHHh-ccCCcceEEEecCHHHHhhcCCCCCCCCCeEEE
Q 015527 159 KMTLGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (405)
Q Consensus 159 ~~~~~~~~i~~~~~~~~~l~~-~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~i~~ 236 (405)
+.+|+++.|++.++++.+++. ++.++|+||.+++++.++.|.++| .+++++.|+++++.+++++++++. |+|++
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~~----p~ivl 78 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVSL----GKLVL 78 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHTCCS----SEEEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEECcHHHHHHcCCCC----CeEEE
Confidence 467899999999999999998 999999999999999999999999 678999999999999999999984 99999
Q ss_pred eecC------CCcccccc--CCCCHHHHHHHHhccCCCCccccccccccccccCCccEEEEEecC--C-----CcHHHHH
Q 015527 237 LHLE------AGKATPFR--HQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRKQLWLFAPA--Y-----GSDKVIL 301 (405)
Q Consensus 237 ~~~~------~~~~~~y~--g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~~~i~f~~~--~-----~~~~~~~ 301 (405)
|++. ++....|+ |.++.++|.+||..++.|++.++|.+|+..++. +.|++++|... . +.+.+..
T Consensus 79 fk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~ 157 (250)
T 3ec3_A 79 MQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRN 157 (250)
T ss_dssp ECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHH
T ss_pred EecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHHH
Confidence 9952 45678888 478999999999999999999999999998884 55777766632 1 1356888
Q ss_pred HHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCC-CcEEEEEeCCCccccCC-CCCCHHHHHHHHHHHhcCce--
Q 015527 302 TFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNA-PRVIAYSARDAKKYVLN-GELTLSSIKSFGEEFLEDKL-- 377 (405)
Q Consensus 302 ~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~-~p~i~i~~~~~~~y~~~-~~~~~~~l~~Fi~~~~~Gkl-- 377 (405)
.++++|++++ +++|+|+|+.++. +.++.||++... +|.+++.+.++.+|.+. ++++.++|.+|++++++|++
T Consensus 158 ~~~~vAk~~k-ki~F~~~d~~~~~---~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl~p 233 (250)
T 3ec3_A 158 KVLEVAKDFP-EYTFAIADEEDYA---TEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFDSDALREFVMAFKKGKLKP 233 (250)
T ss_dssp HHHHHHTTCT-TSEEEEEETTTTH---HHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCCHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHhhc-ceeEEEEcHHHHH---HHHHHcCCCccCCCcEEEEEcCCCceecCCcccCCHHHHHHHHHHHHCCCccc
Confidence 9999999999 9999999998753 567899998653 56777777778899987 68999999999999999999
Q ss_pred eeecccCchhhhcCcc
Q 015527 378 LNQSDQISETILKLPS 393 (405)
Q Consensus 378 ~~kse~iPe~~~~~~~ 393 (405)
++|||||||+ +.+++
T Consensus 234 ~~kSepiPe~-~~~pV 248 (250)
T 3ec3_A 234 VIKSQPVPKN-NKGAA 248 (250)
T ss_dssp CC--------------
T ss_pred eeecCCCCCC-CCCCC
Confidence 9999999998 66554
No 11
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.97 E-value=3.4e-29 Score=218.65 Aligned_cols=208 Identities=23% Similarity=0.410 Sum_probs=178.6
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCC---cEEEEEeCcccHhHHHhCCCcccce
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE---ADLVMVDAYLEKDLAKEYNILAYPT 130 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~---v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (405)
....+..+++++|+..+.++++++|+|||+||++|+.+.|.|.++++.+++. +.++.|||++++++|++|+|.++||
T Consensus 13 ~~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPT 92 (241)
T ss_dssp EETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cCCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCE
Confidence 4567999999999999999999999999999999999999999999999874 9999999999999999999999999
Q ss_pred EEEEeCCeeeeeecCCCCHHHHHHHHHhhhcCC------ccccCChhHHHHHhccCCeEEEEEEcCCCCcc---HHHHHH
Q 015527 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTLG------TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAA 201 (405)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~------~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~~---~~~~~~ 201 (405)
+++|++|+.+ +|.|.++.+.+.+|+.+.+.+. .....+.+.++.++..++.++|.|+++||.++ .+.+..
T Consensus 93 ~~~~~~g~~~-~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~ 171 (241)
T 3idv_A 93 IKILKKGQAV-DYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEK 171 (241)
T ss_dssp EEEEETTEEE-ECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHH
T ss_pred EEEEcCCCcc-cccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHH
Confidence 9999999655 7999999999999999988653 22333668888998888999999999999874 456666
Q ss_pred Hh-ccC---CcceEEEe---cCHHHHhhcCCCCCCCCCeEEEeecCCCccccccCCCCHHHHHHHHhccCCCC
Q 015527 202 AS-KLH---SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPL 267 (405)
Q Consensus 202 ~a-~~~---~~~~f~~~---~~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~p~ 267 (405)
++ .+. ..+.|+.+ .+.+++++|+++. +|++++|+++ +...|.|.++.++|.+||..+.-|.
T Consensus 172 ~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 172 AAKELSKRSPPIPLAKVDATAETDLAKRFDVSG---YPTLKIFRKG--RPYDYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp HHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS---SSEEEEEETT--EEEECCSCCSHHHHHHHHHHHTTCT
T ss_pred HHHHHhccCCcEEEEEEECCCCHHHHHHcCCcc---cCEEEEEECC--eEEEecCCCCHHHHHHHHHhhhCCC
Confidence 66 333 33777766 4778999999994 9999999864 5667999999999999999887664
No 12
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.96 E-value=1.7e-27 Score=205.16 Aligned_cols=210 Identities=17% Similarity=0.248 Sum_probs=182.9
Q ss_pred CCccccCChhHHHHHhccCCeEEEEEEcCCCCccHHHHHHHhccCCcceEEEecCHHHHhhcCCCCCCCCCeEEEeecCC
Q 015527 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEA 241 (405)
Q Consensus 162 ~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~i~~~~~~~ 241 (405)
..+..+.+.++++.+++.++.++|+||.++|++.++.|.++|....++.|+++.+.+++++++++. |+|++|++.+
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~~----p~i~lfk~~~ 84 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG----NTICLFRLVD 84 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTCTTSEEEEECCHHHHHHTTCCS----SEEEEEETTT
T ss_pred CCCeeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhCCCceEEEECCHHHHHHcCCCC----CeEEEEEecC
Confidence 346688899999999999999999999999999999999999544799999999999999999984 9999999876
Q ss_pred CccccccC----CCCHHHHHHHHhccCCCCccccccccccccccCCccEE-EEEec-CC-CcHHHHHHHHHHHHHhcCcE
Q 015527 242 GKATPFRH----QFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRKQL-WLFAP-AY-GSDKVILTFEEVAKALKGKL 314 (405)
Q Consensus 242 ~~~~~y~g----~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~~~-i~f~~-~~-~~~~~~~~~~~va~~~~~~~ 314 (405)
+.+..|+| .++.++|.+||..++.|++.++|.+|+..++..+.|.+ ++|.+ ++ +++++.+.|+++|+++++++
T Consensus 85 ~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i 164 (227)
T 4f9z_D 85 NEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKI 164 (227)
T ss_dssp TEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTC
T ss_pred cccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCE
Confidence 67778885 78999999999999999999999999999998887554 45655 33 47788999999999999999
Q ss_pred EEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeC-CCccccCC-CCCCHHHHHHHHHHHhcCc
Q 015527 315 LHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLN-GELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 315 ~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~-~~~~y~~~-~~~~~~~l~~Fi~~~~~Gk 376 (405)
+|+|+|+++.. +.+.++.||++....|.+++++. ++++|.+. ++++.++|.+|++++++||
T Consensus 165 ~F~~vd~~~~~-~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 165 LFILVDSGMKE-NGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp EEEEEETTSGG-GHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred EEEEeCCccHh-HHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 99999998644 33678999998767899999987 55678875 6899999999999999996
No 13
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.95 E-value=4.1e-27 Score=217.91 Aligned_cols=237 Identities=21% Similarity=0.358 Sum_probs=206.3
Q ss_pred hcCCccccCChhHHHHHhccCCeEEEEEEcCCCCccHHHHHHHhccCCcceEEEecCHHHHhhcCCCCCCCCCeEEEeec
Q 015527 160 MTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHL 239 (405)
Q Consensus 160 ~~~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~i~~~~~ 239 (405)
..+.+..+.+.++++.+++.++.++|+||.+.+++..+.|.++|....++.|+++++.+++++++++. |++++|++
T Consensus 15 ~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~~~~f~~~A~~~~~~~F~~t~~~~v~~~~~v~~----~~i~lfk~ 90 (361)
T 3uem_A 15 GSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDK----DGVVLFKK 90 (361)
T ss_dssp CCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHHHHHHHHHHHHCSSSCEEEECCHHHHHHTTCSS----SEEEEEES
T ss_pred ccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchHHHHHHHHHhcCCCceEEEECcHHHHHHhCCCC----CeEEEEEe
Confidence 45667889999999999999999999999998899999999999655899999999999999999984 99999998
Q ss_pred CCCccccccCCCCHHHHHHHHhccCCCCccccccccccccccCCc-cEEEEEe-cCCC-cHHHHHHHHHHHHHhcCcEEE
Q 015527 240 EAGKATPFRHQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPR-KQLWLFA-PAYG-SDKVILTFEEVAKALKGKLLH 316 (405)
Q Consensus 240 ~~~~~~~y~g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~-~~~i~f~-~~~~-~~~~~~~~~~va~~~~~~~~f 316 (405)
.++....|+|+++.++|.+||..+..|++.+++.+++..++..+. +++++|. +++. |+++.+.|+++|+++++++.|
T Consensus 91 f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f 170 (361)
T 3uem_A 91 FDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILF 170 (361)
T ss_dssp STTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEE
T ss_pred cCCCccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEE
Confidence 777889999999999999999999999999999999999998876 5555555 4554 899999999999999999999
Q ss_pred EEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeC--CCccccCC-CCCCHHHHHHHHHHHhcCce--eeecccCchh----
Q 015527 317 VYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR--DAKKYVLN-GELTLSSIKSFGEEFLEDKL--LNQSDQISET---- 387 (405)
Q Consensus 317 ~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~--~~~~y~~~-~~~~~~~l~~Fi~~~~~Gkl--~~kse~iPe~---- 387 (405)
+++|++... +.++++.||+.....|.+++++. ...+|.+. +.++.++|.+|++++++|++ +.+|+++|+.
T Consensus 171 ~~vd~~~~~-~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~ 249 (361)
T 3uem_A 171 IFIDSDHTD-NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQ 249 (361)
T ss_dssp EEECTTSGG-GHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTS
T ss_pred EEecCChHH-HHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccC
Confidence 999998433 45899999998767899998876 34577765 58999999999999999999 8999999986
Q ss_pred -hhcCccCcccceee
Q 015527 388 -ILKLPSQSRASYQL 401 (405)
Q Consensus 388 -~~~~~~~~~~~~~~ 401 (405)
+..+.+++|++.++
T Consensus 250 ~v~~l~~~~f~~~~~ 264 (361)
T 3uem_A 250 PVKVLVGKNFEDVAF 264 (361)
T ss_dssp SSEEECTTTHHHHHT
T ss_pred CcEEeecCchhhhcc
Confidence 55666788877654
No 14
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.92 E-value=7.1e-23 Score=178.56 Aligned_cols=203 Identities=17% Similarity=0.258 Sum_probs=148.9
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC---CcEEEEEeC--cccHhHHHhCCCcc
Q 015527 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDA--YLEKDLAKEYNILA 127 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~v~~--~~~~~~~~~~~i~~ 127 (405)
....+..+++++|+..+ .++++++|+|||+||++|+.+.|.|+++++.+++ .+.|+.||| ++++++|++|+|.+
T Consensus 10 ~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~ 89 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG 89 (244)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS
T ss_pred CCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc
Confidence 44678999999999877 5569999999999999999999999999999987 799999999 67899999999999
Q ss_pred cceEEEEeCCee-----eeeecCCCCHHHHHHHHHhhhcCCcc---------ccCChhHHHHHhccC-CeEEEEEEcCCC
Q 015527 128 YPTLYLFVAGVR-----QFQFFGERTRDVISAWVREKMTLGTY---------SITTTDEAERILTVE-SKLVLGFLHDLE 192 (405)
Q Consensus 128 ~Pt~~~~~~g~~-----~~~~~g~~~~~~l~~~i~~~~~~~~~---------~i~~~~~~~~~l~~~-~~~~v~f~~~~~ 192 (405)
+||+++|++|+. ..++.| .+.+.|.++|.+.+..... ...+.+++..++..+ ...++.+|.+..
T Consensus 90 ~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~ 168 (244)
T 3q6o_A 90 FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGG 168 (244)
T ss_dssp SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTT
T ss_pred cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECC
Confidence 999999997422 235666 6999999999998854331 233567787777442 233334444433
Q ss_pred CccHHHHHHHhccCCcceEEEecC--HHHHhhcCCCCCCCCCeEEEeecCCCccccccCCC-CHHHHHHHHh
Q 015527 193 GMESEELAAASKLHSDVNFYQTTS--ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIANFVT 261 (405)
Q Consensus 193 ~~~~~~~~~~a~~~~~~~f~~~~~--~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~~-~~~~l~~fi~ 261 (405)
..........-.....+.+..+.+ ..++++|+++. +|+++++..+ ++...++... +...+..+++
T Consensus 169 ~~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~---~Pslvl~~~~-g~~~~~~~~~~~r~~~~~~l~ 236 (244)
T 3q6o_A 169 SYLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTD---FPSCYLLFRN-GSVSRVPVLMESRSFYTAYLQ 236 (244)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETT-SCEEECCCSSSSHHHHHHHHH
T ss_pred cchHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCC---CCeEEEEeCC-CCeEeeccccccHHHHHHHHH
Confidence 332222222112335566766655 89999999995 8999999875 4666666443 3466666664
No 15
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.91 E-value=1.4e-21 Score=180.75 Aligned_cols=300 Identities=17% Similarity=0.238 Sum_probs=231.9
Q ss_pred CCcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l-~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..+..+ +.+++++++..+++++|.|+.+-+..+ ...|.++|+.+ +++.|+.+ .++++|+++++.. |++++|
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t---~~~~v~~~~~v~~-~~i~lf 88 (361)
T 3uem_A 17 EFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGIT---SNSDVFSKYQLDK-DGVVLF 88 (361)
T ss_dssp SSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEE---CCHHHHHHTTCSS-SEEEEE
T ss_pred ccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEE---CcHHHHHHhCCCC-CeEEEE
Confidence 456677 458899999889999999998766654 46899999998 57888855 4789999999998 999999
Q ss_pred eC-CeeeeeecCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhcc-CCeEEEEEEcCCCCc---cHHHHHHHh-ccCCc
Q 015527 135 VA-GVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTV-ESKLVLGFLHDLEGM---ESEELAAAS-KLHSD 208 (405)
Q Consensus 135 ~~-g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~-~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~ 208 (405)
+. ......|.|..+.+.|.+||.....|.+..++. +.+..+... ...+++.|+.++|.+ ..+.+..+| ++.++
T Consensus 89 k~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~-~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~ 167 (361)
T 3uem_A 89 KKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTE-QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK 167 (361)
T ss_dssp ESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECST-TTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT
T ss_pred EecCCCccccCCcCCHHHHHHHHHHcCCCcceecCc-ccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc
Confidence 84 235678899999999999999999898888854 555566655 456678888888876 445677888 67788
Q ss_pred ceEEEec-----CHHHHhhcCCCCCCCCCeEEEeecCCCcccccc---CCCCHHHHHHHHhccCC---------------
Q 015527 209 VNFYQTT-----SADVAEFFHIHPKSKRPALIFLHLEAGKATPFR---HQFTRLAIANFVTHTKH--------------- 265 (405)
Q Consensus 209 ~~f~~~~-----~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~---g~~~~~~l~~fi~~~~~--------------- 265 (405)
+.|+.+. ...+++.|+++. .+.|++++++.++ ....|. |.++.++|.+|+.....
T Consensus 168 i~f~~vd~~~~~~~~~~~~fgi~~-~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~ 245 (361)
T 3uem_A 168 ILFIFIDSDHTDNQRILEFFGLKK-EECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 245 (361)
T ss_dssp CEEEEECTTSGGGHHHHHHTTCCT-TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTT
T ss_pred eEEEEecCChHHHHHHHHHcCCCc-cCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcc
Confidence 9998763 456899999972 2389999998743 233443 67999999999986311
Q ss_pred ---CCcccccccccccccc-CCcc-EEEEEecCCC-cHHHHHHHHHHHHHhcCc--EEEEEEEcCCcchhhhhhhhcCCC
Q 015527 266 ---PLVVTLTIHNAQFVFQ-DPRK-QLWLFAPAYG-SDKVILTFEEVAKALKGK--LLHVYVEMNSEGVGRRVSQEFGVS 337 (405)
Q Consensus 266 ---p~v~~l~~~~~~~~~~-~~~~-~~i~f~~~~~-~~~~~~~~~~va~~~~~~--~~f~~id~~~~~~~~~~~~~~gi~ 337 (405)
..+..++..++..+.. .+.+ ++.+|++||. |+...+.|.++|++++++ +.|+.+|++... ++.|++.
T Consensus 246 ~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~-----~~~~~v~ 320 (361)
T 3uem_A 246 WDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE-----VEAVKVH 320 (361)
T ss_dssp TTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB-----CSSCCCC
T ss_pred cccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc-----hhhcCCc
Confidence 1366778888887663 4444 4556778888 999999999999999875 999999999753 5678886
Q ss_pred CCCCcEEEEEeCC--CccccCCCCCCHHHHHHHHHHHh
Q 015527 338 GNAPRVIAYSARD--AKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 338 ~~~~p~i~i~~~~--~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
. .|.++++..+ .....+.|..+.+.|.+||++..
T Consensus 321 ~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 321 S--FPTLKFFPASADRTVIDYNGERTLDGFKKFLESGG 356 (361)
T ss_dssp S--SSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTS
T ss_pred c--cCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcC
Confidence 5 7898888653 34567899999999999998754
No 16
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.91 E-value=2e-23 Score=168.37 Aligned_cols=137 Identities=21% Similarity=0.303 Sum_probs=124.8
Q ss_pred CCCccccccCchhhhhhcccCCCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCC
Q 015527 26 TQSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE 105 (405)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~ 105 (405)
+.+|...+++|+......+.++.+........+.++++++|++.+.++++++|+||++||++|+.+.|.|++++++++++
T Consensus 17 c~~c~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~ 96 (155)
T 2ppt_A 17 CLACGQANKVPSDRLAAGPKCGICGAGLITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ 96 (155)
T ss_dssp CTTTCCEEEEEGGGTTSCCBCTTTCCBSCCSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred CccccccccCCcccccCCCCCCcCCccccCCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC
Confidence 35688889999888887788888766666778899999999999877899999999999999999999999999999888
Q ss_pred cEEEEEeCcccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 106 ADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 106 v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
+.|+.||++++++++++|+|.++||+++|++|+.+.++.|..+.+.|.+||.+.++.
T Consensus 97 v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 97 VRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp CEEEEEETTTSTHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999998754
No 17
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.90 E-value=4.1e-23 Score=165.70 Aligned_cols=137 Identities=19% Similarity=0.346 Sum_probs=125.4
Q ss_pred CCCccccccCchhhhhhcccCCCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCC
Q 015527 26 TQSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE 105 (405)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~ 105 (405)
+.+|...++++.......+.++.+........+..+++++|++.+.++++++|+||++||++|+.+.|.|+++++.++++
T Consensus 8 c~~c~~~n~~p~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~ 87 (148)
T 3p2a_A 8 CTACMATNRLPEERIDDGAKCGRCGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK 87 (148)
T ss_dssp CTTTCCEEEEESSCSCSCCBCTTTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT
T ss_pred CcccccccCCCCcccccCCcchhcCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc
Confidence 45677778888777777777777777777789999999999999988999999999999999999999999999999888
Q ss_pred cEEEEEeCcccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 106 ADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 106 v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
+.|+.||++++++++++|+|.++||+++|++|+.+.++.|..+.+.|.+||.+.+..
T Consensus 88 ~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 88 VRFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp CEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred eEEEEEECcCCHHHHHHCCCCccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999998864
No 18
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.90 E-value=1.9e-22 Score=173.91 Aligned_cols=194 Identities=13% Similarity=0.180 Sum_probs=154.6
Q ss_pred hhHHHHH---cCCCcEEEEEecC-CChhHhhhHHHHHHHHHHccCCcEEEEEeCcc--cHhHHHhCCCcccceEEEEeCC
Q 015527 64 KNFSEFM---GKNRNVMVMFYAN-WCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--EKDLAKEYNILAYPTLYLFVAG 137 (405)
Q Consensus 64 ~~~~~~~---~~~~~~~v~f~a~-~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~~g 137 (405)
+.++..+ .+++++++.||++ ||++|+.+.|.++++++. .+++.|+.|||++ ++++|++|+|.++||+++|++|
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g 88 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDG 88 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCC
Confidence 4555555 2456778999999 999999999999999875 4589999999999 9999999999999999999988
Q ss_pred eee-eeecCCCCHHHHHHHHHhhhc--CCccccCChhHHHHHhccCCeE-EEEEEcCCCCccH---HHHHHHhc-cC---
Q 015527 138 VRQ-FQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTVESKL-VLGFLHDLEGMES---EELAAASK-LH--- 206 (405)
Q Consensus 138 ~~~-~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~l~~~~~~-~v~f~~~~~~~~~---~~~~~~a~-~~--- 206 (405)
+.. .+|.|..+.+.+.+|+...+. .....+ +.+.++.+...++.+ ++.|+++||.++. +.+..++. +.
T Consensus 89 ~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~ 167 (226)
T 1a8l_A 89 KDFGVRYFGLPAGHEFAAFLEDIVDVSREETNL-MDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAG 167 (226)
T ss_dssp BCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCC-CHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTT
T ss_pred ceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhccccc
Confidence 654 789999999999999988763 233344 556777776666666 9999999999854 44555553 33
Q ss_pred -CcceEEEe---cCHHHHhhcCCCCCCCCCeEEEeecCCCccccccCCCCHHHHHHHHhcc
Q 015527 207 -SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (405)
Q Consensus 207 -~~~~f~~~---~~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (405)
+++.++.+ .+.+++++|++.. .|++++++.++ ....+.|..+.++|.+||...
T Consensus 168 ~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 168 KGKILGDMVEAIEYPEWADQYNVMA---VPKIVIQVNGE-DRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp CCCEEEEEEEGGGCHHHHHHTTCCS---SCEEEEEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred CCcEEEEEEEcccCHHHHHhCCCcc---cCeEEEEeCCc-eeEEEcCCCCHHHHHHHHHHh
Confidence 47777766 5667999999984 99999997643 456788999999999999753
No 19
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.90 E-value=3.9e-22 Score=172.32 Aligned_cols=192 Identities=11% Similarity=0.148 Sum_probs=152.1
Q ss_pred hhHHHHH--cCCCcEEEEEe-----cCCChhHhhhHHHHHHHHHHc--cCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 64 KNFSEFM--GKNRNVMVMFY-----ANWCYWSKKLAPEFAAAAKML--KGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 64 ~~~~~~~--~~~~~~~v~f~-----a~~C~~C~~~~~~~~~~~~~~--~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
+.++..+ ...++++|.|| ++||++|+.+.|.|.++++.+ .+++.++.|||++++++|++|+|+++||+++|
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~ 88 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIE 88 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEE
Confidence 3455555 33455555555 899999999999999999888 55899999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHhhhc--CCccccCChhHHHHHhccCCeE-EEEEEcCCCCccHH---HHHHHhccCCc
Q 015527 135 VAGVRQFQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTVESKL-VLGFLHDLEGMESE---ELAAASKLHSD 208 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~l~~~~~~-~v~f~~~~~~~~~~---~~~~~a~~~~~ 208 (405)
++|....+|.|.++.+++..|+...+. ..+..+ +.+.++.+...+..+ ++.|+++||.++.. .+..++...++
T Consensus 89 ~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~ 167 (229)
T 2ywm_A 89 GDKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQL-SEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDY 167 (229)
T ss_dssp SSSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSC-CHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTT
T ss_pred CCCcccceecCCccHHHHHHHHHHHHhccCCccCC-CHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCCC
Confidence 977788999999999999999988763 344555 567777777665555 77799999998544 45556644467
Q ss_pred ceEEEe---cCHHHHhhcCCCCCCCCCeEEEeecCCCccccccCCCCHHHHHHHHhcc
Q 015527 209 VNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (405)
Q Consensus 209 ~~f~~~---~~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (405)
+.|+.+ .+.+++++|++.. .|++++ ++ +...|.|..+.++|.+|+...
T Consensus 168 v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~--~G--~~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 168 ITSKVIDASENQDLAEQFQVVG---VPKIVI--NK--GVAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp EEEEEEEGGGCHHHHHHTTCCS---SSEEEE--GG--GTEEEESCCCHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHHcCCcc---cCEEEE--CC--EEEEeeCCCCHHHHHHHHHHH
Confidence 888766 4678999999984 999998 32 345589999999999999754
No 20
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.90 E-value=9.1e-23 Score=152.53 Aligned_cols=96 Identities=23% Similarity=0.437 Sum_probs=88.2
Q ss_pred ChhhHHHHHc--CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCee
Q 015527 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (405)
Q Consensus 62 ~~~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~ 139 (405)
+.++|++.+. ++++++|.|||+||+||+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||+++|++|+.
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~ 85 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQK 85 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHHHHHHcCCCeecEEEEEECCEE
Confidence 4578998883 46899999999999999999999999999987 69999999999999999999999999999999999
Q ss_pred eeeecCCCCHHHHHHHHHhh
Q 015527 140 QFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 140 ~~~~~g~~~~~~l~~~i~~~ 159 (405)
+.++.| .+.++|.++|+++
T Consensus 86 v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 86 LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEEES-CCHHHHHHHHHHH
T ss_pred EEEEeC-cCHHHHHHHHHhc
Confidence 999999 4899999999874
No 21
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.89 E-value=1.5e-22 Score=155.41 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=98.2
Q ss_pred CCcEEcChhhHHHHHcCCC-cEEEEEecCCC--hhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEE
Q 015527 56 KDVVSLNGKNFSEFMGKNR-NVMVMFYANWC--YWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~-~~~v~f~a~~C--~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
.....+++++|++.+.+++ +++|.|||+|| ++|+.+.|.+++++++|++++.|++||.+++++++.+|+|+++||++
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLA 94 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 5667899999998886665 99999999999 99999999999999999989999999999999999999999999999
Q ss_pred EEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+|++|+.+.+..|..+.+.|.++|.+.+
T Consensus 95 lFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 95 VVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999999998877
No 22
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.88 E-value=1e-22 Score=157.00 Aligned_cols=109 Identities=6% Similarity=0.086 Sum_probs=100.5
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCC--ChhHhhhHHHHHHHHHHccCC-cEEEEEeCcccHhHHHhCCCcccceEEE
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW--CYWSKKLAPEFAAAAKMLKGE-ADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~--C~~C~~~~~~~~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (405)
.+..+++++|++.+.++++++|.|||+| |++|+.+.|.+++++++|+++ +.|++||.|++++++.+|||+++||+++
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlil 97 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLV 97 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEE
Confidence 6679999999998888889999999999 999999999999999999988 9999999999999999999999999999
Q ss_pred EeCCeeeeeecCCCCHHHHHHHHHhhhcCCcc
Q 015527 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTY 165 (405)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 165 (405)
|++|+.+.+..|..+.+.|.+||.+.+..+..
T Consensus 98 Fk~G~~v~~~~G~~~k~~l~~~i~~~l~~~~~ 129 (140)
T 2qgv_A 98 FTGGNYRGVLNGIHPWAELINLMRGLVEPQQE 129 (140)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHHC----
T ss_pred EECCEEEEEEecCCCHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999988855443
No 23
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.88 E-value=9.7e-22 Score=149.50 Aligned_cols=106 Identities=17% Similarity=0.323 Sum_probs=100.6
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..+..+++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++||+++|
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 83 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYF 83 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEE
Confidence 468899999999998 7889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++|+.+.++.|..+.+.+.+||.+.++
T Consensus 84 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 84 KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 999899999999999999999998764
No 24
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.88 E-value=7.5e-21 Score=181.50 Aligned_cols=204 Identities=14% Similarity=0.226 Sum_probs=150.8
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC---CcEEEEEeCc--ccHhHHHhCCCcc
Q 015527 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAY--LEKDLAKEYNILA 127 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~v~~~--~~~~~~~~~~i~~ 127 (405)
....+..+++++|+..+ .++++++|+|||+||++|+.++|.|+++++++++ .+.|+.|||+ +++++|++|+|.+
T Consensus 10 ~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 10 SSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 44679999999999877 5679999999999999999999999999999987 7999999995 5899999999999
Q ss_pred cceEEEEeC----CeeeeeecCCCCHHHHHHHHHhhhcCC----------ccccCChhHHHHHhccC-CeEEEEEEcCCC
Q 015527 128 YPTLYLFVA----GVRQFQFFGERTRDVISAWVREKMTLG----------TYSITTTDEAERILTVE-SKLVLGFLHDLE 192 (405)
Q Consensus 128 ~Pt~~~~~~----g~~~~~~~g~~~~~~l~~~i~~~~~~~----------~~~i~~~~~~~~~l~~~-~~~~v~f~~~~~ 192 (405)
+||+++|++ |+....+.|..+.+.|.++|.+.+... +..+ +.+++..++..+ ...++++|.+..
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~i-t~~~l~~~l~~~~~~~vallF~~~~ 168 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPA-KLNDIDGFFTRNKADYLALVFERED 168 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBC-CHHHHTTGGGSCCCSEEEEEEECTT
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcC-CHHHHHHHhccCCCCeEEEEecCCc
Confidence 999999984 545567788899999999999888532 2333 557777777553 333444444444
Q ss_pred CccHHHHHHHhccCCcceEEEe--cCHHHHhhcCCCCCCCCCeEEEeecCCCccccccCCCCH-HHHHHHHhc
Q 015527 193 GMESEELAAASKLHSDVNFYQT--TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTR-LAIANFVTH 262 (405)
Q Consensus 193 ~~~~~~~~~~a~~~~~~~f~~~--~~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~~~~-~~l~~fi~~ 262 (405)
+.........-.....+.+..+ ++.+++++|+++. +|+++++..++ +...++...+. ..+..++..
T Consensus 169 s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~---~Pslvl~~~nG-k~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 169 SYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTD---FPSCYLLLRNG-SVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETTS-CEEECCCSSCSHHHHHHHHTT
T ss_pred hHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCC---CCeEEEEeCCC-ceeecccccccHHHHHHHHHH
Confidence 4333322222233355666555 4468999999995 89999998754 44444433333 456667664
No 25
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.88 E-value=4.6e-22 Score=155.11 Aligned_cols=106 Identities=17% Similarity=0.317 Sum_probs=95.9
Q ss_pred cCCCcEEcChhhHHHHHc-CCCcEEEEEecCCChhHhhhHHHHHHHHHHcc-----CCcEEEEEeCcccHhHHHhCCCcc
Q 015527 54 YAKDVVSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-----GEADLVMVDAYLEKDLAKEYNILA 127 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~-~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~-----~~v~~~~v~~~~~~~~~~~~~i~~ 127 (405)
....+..+++++|++.+. ++++++|.|||+||++|+.+.|.|+++++.+. +++.|+.|||++++++|++|+|.+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 456799999999999884 68999999999999999999999999998764 369999999999999999999999
Q ss_pred cceEEEEeCCeee--eeecCCCCHHHHHHHHHhh
Q 015527 128 YPTLYLFVAGVRQ--FQFFGERTRDVISAWVREK 159 (405)
Q Consensus 128 ~Pt~~~~~~g~~~--~~~~g~~~~~~l~~~i~~~ 159 (405)
+||+++|++|+.. .+|.|.++.+.|.+||.++
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999977443 6899999999999999875
No 26
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.88 E-value=7.4e-22 Score=150.32 Aligned_cols=105 Identities=21% Similarity=0.367 Sum_probs=99.7
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCC
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (405)
+++++.++|++.+ ++++++|.||++||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++||++++++|
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 81 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDG 81 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEETT
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeCC
Confidence 6789999999988 889999999999999999999999999999987899999999999999999999999999999999
Q ss_pred eeeeeecCCCCHHHHHHHHHhhhcCC
Q 015527 138 VRQFQFFGERTRDVISAWVREKMTLG 163 (405)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (405)
+.+.++.|..+.+.+.+|+.+.++++
T Consensus 82 ~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 82 EVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 98999999999999999999998654
No 27
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.87 E-value=1.9e-21 Score=147.31 Aligned_cols=105 Identities=25% Similarity=0.424 Sum_probs=100.4
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
..+..+++++|++.+.++++++|+||++||++|+.+.|.+.++++.+++++.|+.||++++++++++|+|.++||+++|.
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 83 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFV 83 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEEc
Confidence 56789999999999988999999999999999999999999999999888999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+|+.+.++.|..+.+.+.++|.+++
T Consensus 84 ~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 84 NGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCcEEEeeeccCCHHHHHHHHHHHh
Confidence 9999999999999999999998875
No 28
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.87 E-value=2.6e-21 Score=145.81 Aligned_cols=104 Identities=21% Similarity=0.367 Sum_probs=98.4
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
..+.++++++|++.+ ++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++++
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFK 81 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEe
Confidence 357889999999999 8899999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+|+.+.++.|..+.+.+.++|.+.+
T Consensus 82 ~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 82 DGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 9999999999999999999998753
No 29
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.87 E-value=8.7e-22 Score=153.32 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=92.4
Q ss_pred cEEcC-hhhHHHHH--cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 58 VVSLN-GKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 58 ~~~l~-~~~~~~~~--~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
+..++ .++|++.+ .++++++|.|||+||+||+.+.|.++++++++++++.|+.||.+++++++++|+|.+.||+++|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEE
Confidence 44554 58898777 3678999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeee--e-------eecCCCC-HHHHHHHHHhhh
Q 015527 135 VAGVRQ--F-------QFFGERT-RDVISAWVREKM 160 (405)
Q Consensus 135 ~~g~~~--~-------~~~g~~~-~~~l~~~i~~~~ 160 (405)
++|+.+ . +..|... .++|.++|+..+
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999776 4 7889877 999999998776
No 30
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.87 E-value=3.1e-21 Score=145.91 Aligned_cols=105 Identities=21% Similarity=0.402 Sum_probs=98.2
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..+..+++++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 467899999999655 6789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++|+...++.|..+.+.+.++|.+.+
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 99988899999999999999998875
No 31
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.87 E-value=2.6e-21 Score=145.51 Aligned_cols=103 Identities=21% Similarity=0.420 Sum_probs=97.2
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCC
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (405)
++++++++|+..+.++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++++|
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 81 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGG 81 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeCC
Confidence 57899999998888899999999999999999999999999999987899999999999999999999999999999999
Q ss_pred eeeeeecCCCCHHHHHHHHHhhh
Q 015527 138 VRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+...++.|..+.+.+.+++.+.+
T Consensus 82 ~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 82 RPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEEEEEESCCCHHHHHHHTTTTT
T ss_pred eEEEEEecCCCHHHHHHHHHHHh
Confidence 88899999999999999998765
No 32
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.87 E-value=1.5e-21 Score=149.49 Aligned_cols=105 Identities=24% Similarity=0.330 Sum_probs=96.1
Q ss_pred cCCCcEEcChhhHHHHHc--CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceE
Q 015527 54 YAKDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (405)
........+.++|++.+. ++++++|.||++||++|+.+.|.++++++++++ +.|+.||++++++++++|+|.++||+
T Consensus 10 ~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 10 HGSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp --CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred CCcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEE
Confidence 334566788999999997 899999999999999999999999999999986 99999999999999999999999999
Q ss_pred EEEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 132 YLFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+++++|+.+.++.|. +.+.|.++|.+++
T Consensus 89 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 999999899999999 9999999998763
No 33
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.87 E-value=3.4e-21 Score=153.02 Aligned_cols=112 Identities=31% Similarity=0.512 Sum_probs=103.9
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCC---cEEEEEeCcccHhHHHhCCCcccce
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE---ADLVMVDAYLEKDLAKEYNILAYPT 130 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~---v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (405)
....+..+++++|+..+.++++++|+||++||++|+.+.|.|.++++.+++. +.|+.||++++++++++|+|.++||
T Consensus 15 ~~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 94 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPT 94 (140)
T ss_dssp EETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSE
T ss_pred CCCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCe
Confidence 4567899999999999988999999999999999999999999999999874 9999999999999999999999999
Q ss_pred EEEEeCCeeeeeecCCCCHHHHHHHHHhhhcCCccc
Q 015527 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYS 166 (405)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 166 (405)
+++|++|+ ..++.|..+.+.|.+||.+.+.++...
T Consensus 95 ~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 95 IKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp EEEEETTE-EEECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred EEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 99999997 888999999999999999999776543
No 34
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.86 E-value=1.7e-21 Score=154.48 Aligned_cols=133 Identities=27% Similarity=0.420 Sum_probs=105.2
Q ss_pred HHhccCCCCccccccccccccccCCccEEEE-EecCCC--cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcC
Q 015527 259 FVTHTKHPLVVTLTIHNAQFVFQDPRKQLWL-FAPAYG--SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFG 335 (405)
Q Consensus 259 fi~~~~~p~v~~l~~~~~~~~~~~~~~~~i~-f~~~~~--~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~g 335 (405)
-+.++++|+|.++|.+|+..+++.+.+.+++ |....+ .+.+.+.++++|++++++++|+++|.+... +.+.++.||
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~-~~~~l~~fG 85 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTD-NQRILEFFG 85 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGG-GHHHHHHTT
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHh-HHHHHHHcC
Confidence 3567899999999999999999998876554 664332 667899999999999999999999984334 336789999
Q ss_pred CCCCCCcEEEEEeC--CCccccCC-CCCCHHHHHHHHHHHhcCce--eeecccCchhhhcCc
Q 015527 336 VSGNAPRVIAYSAR--DAKKYVLN-GELTLSSIKSFGEEFLEDKL--LNQSDQISETILKLP 392 (405)
Q Consensus 336 i~~~~~p~i~i~~~--~~~~y~~~-~~~~~~~l~~Fi~~~~~Gkl--~~kse~iPe~~~~~~ 392 (405)
++.+..|+++|.+. ++.+|.+. ++++.++|.+|++++++|+| ++||||||++|+.++
T Consensus 86 l~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~wn~~p 147 (147)
T 3bj5_A 86 LKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQP 147 (147)
T ss_dssp CCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGGGC---
T ss_pred CCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCCcCCCC
Confidence 99877899999875 57789876 68999999999999999999 999999999987654
No 35
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.86 E-value=6.2e-21 Score=144.43 Aligned_cols=106 Identities=24% Similarity=0.431 Sum_probs=99.0
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeC
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~ 136 (405)
.+..+++++|+..+.++++++|.||++||++|+.+.|.+.++++.+++++.++.||++++++++++|+|.++|+++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKD 81 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeC
Confidence 47789999999888888999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 137 GVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
|+...++.|..+.+.+.+|+.+.++.
T Consensus 82 g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 82 GQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp TEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred CcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 98888999999999999999988753
No 36
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.86 E-value=3.6e-21 Score=163.68 Aligned_cols=116 Identities=20% Similarity=0.418 Sum_probs=108.3
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEE
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (405)
+...+..+++++|+..+.++++++|.||++||++|+.+.|.|.++++.+++++.|+.|||+++++++++|+|.++||+++
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 174 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFI 174 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEE
Confidence 45678999999999999889999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCeeeeeecCCCCHHHHHHHHHhhhcCCccccCC
Q 015527 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITT 169 (405)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~ 169 (405)
|.+|+.+.++.|..+.+.|.+||.+.+++.+..+++
T Consensus 175 ~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~~ 210 (210)
T 3apq_A 175 FRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELST 210 (210)
T ss_dssp ECTTSCCEECCSCCCHHHHHHHHHHHHHCCSSCC--
T ss_pred EECCCceeEecCCCCHHHHHHHHHHhCcccceecCC
Confidence 999988999999999999999999999988887753
No 37
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.86 E-value=5.5e-21 Score=151.61 Aligned_cols=107 Identities=21% Similarity=0.371 Sum_probs=100.6
Q ss_pred CCCcEEcChhhHH-HHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEE
Q 015527 55 AKDVVSLNGKNFS-EFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (405)
Q Consensus 55 ~~~~~~l~~~~~~-~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (405)
...+..+++++|+ ..+.++++++|+||++||++|+.+.|.|.++++.+++++.|+.||++++++++++|+|.++||+++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKF 84 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEE
Confidence 3578999999999 555778999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 134 FVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
|++|+.+.++.|..+.+.|.+||.+.+.
T Consensus 85 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 85 FCHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EeCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999998884
No 38
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.86 E-value=8.3e-21 Score=146.14 Aligned_cols=108 Identities=25% Similarity=0.377 Sum_probs=99.9
Q ss_pred ccCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceE
Q 015527 53 LYAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 53 ~~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (405)
.....+..+++++|++.+ .++++++|.||++||++|+.+.|.+.++++.+++++.++.||++++++++++|+|.++||+
T Consensus 10 ~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 89 (119)
T 1w4v_A 10 HGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTV 89 (119)
T ss_dssp CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred CCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEE
Confidence 344678889999999865 6788999999999999999999999999999987899999999999999999999999999
Q ss_pred EEEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 132 YLFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++|++|+.+.++.|..+.+.|.+||++.+
T Consensus 90 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 90 LAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 99999988899999999999999998876
No 39
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=7.6e-21 Score=149.54 Aligned_cols=107 Identities=36% Similarity=0.584 Sum_probs=100.1
Q ss_pred CCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHcc----CCcEEEEEeCcccHhHHHhCCCcccc
Q 015527 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYP 129 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~----~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (405)
...+..+++++|++.+ .++++++|.||++||++|+.+.|.+.++++.++ +++.|+.||++.+++++++|+|.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 4578999999999876 678899999999999999999999999999997 68999999999999999999999999
Q ss_pred eEEEEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
|+++|++|+.+.++.|..+.+.+.+||.+.+.
T Consensus 86 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 86 TIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp EEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred eEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 99999999888999999999999999998874
No 40
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.86 E-value=1.2e-20 Score=143.74 Aligned_cols=106 Identities=19% Similarity=0.390 Sum_probs=98.2
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..+..+++++|...+ .++++++|.||++||++|+.+.|.+.++++.+++++.++.||++++++++++|+|.++||++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 84 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVY 84 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEE
Confidence 457899999998665 6788999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++|+...++.|..+.+.+.++|.+.+.
T Consensus 85 ~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 85 QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 999888999999999999999988763
No 41
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.85 E-value=9.5e-21 Score=142.91 Aligned_cols=104 Identities=21% Similarity=0.400 Sum_probs=97.4
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..+..+++++|+..+ .++++++|.||++||++|+.+.|.+.++++.+++++.|+.||++++++++++|+|.++||+++|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 468899999999766 6789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHhh
Q 015527 135 VAGVRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
++|+...++.|..+.+.+.+||.+.
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 82 RDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred eCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9998889999999999999999875
No 42
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.85 E-value=6e-21 Score=151.49 Aligned_cols=134 Identities=21% Similarity=0.234 Sum_probs=85.3
Q ss_pred CCccccccCchhhhhhcccCCCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCc
Q 015527 27 QSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEA 106 (405)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v 106 (405)
.+|...++++.........++.+.+.. ..+..+++++|+..+.+++.++|.||++||++|+.+.|.++++++.+++++
T Consensus 6 ~~~~~~~~~~~~r~~~~~~~~~c~~~~--~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v 83 (140)
T 1v98_A 6 PKCGAKNRLGTPPPGQVPVCGACKTPL--PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRL 83 (140)
T ss_dssp ---------------------------------------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTE
T ss_pred ccccccccCCcccccCCcccccccCCC--CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCce
Confidence 455566666665554444444433322 678899999999887555459999999999999999999999999998789
Q ss_pred EEEEEeCcccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 107 DLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 107 ~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
.|+.||++++++++++|+|.++||+++|++|+.+.++.|..+.+.+.+||.+.+..
T Consensus 84 ~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 84 KVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEEEEECCCCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999998889999999999999999988753
No 43
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.85 E-value=1.8e-20 Score=141.77 Aligned_cols=102 Identities=25% Similarity=0.364 Sum_probs=94.3
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeC
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~ 136 (405)
.....+.++|++.+.++++++|.||++||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++||++++++
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 86 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELGDVAQKNEVSAMPTLLLFKN 86 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCccCEEEEEEC
Confidence 44567789999999999999999999999999999999999999997 59999999999999999999999999999999
Q ss_pred CeeeeeecCCCCHHHHHHHHHhhh
Q 015527 137 GVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
|+.+.++.|. +.+.|.++|.+++
T Consensus 87 G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 87 GKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CEEEEEEeCC-CHHHHHHHHHhhC
Confidence 9999999998 7799999998753
No 44
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=1.1e-20 Score=147.01 Aligned_cols=110 Identities=25% Similarity=0.424 Sum_probs=99.7
Q ss_pred CCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcccHhHHHhCCCcccceEEE
Q 015527 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (405)
...++.+++++|++.+.+ .++|+||++||++|+.+.|.+.++++.+++ ++.|+.||++++++++++|+|.++||+++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 83 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYH 83 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEE
Confidence 357899999999987754 399999999999999999999999999986 89999999999999999999999999999
Q ss_pred EeCCeeeeeecCCCCHHHHHHHHHhhhcCCcccc
Q 015527 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSI 167 (405)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i 167 (405)
+++|+ +.++.|..+.+.|.+||.+.+...+..+
T Consensus 84 ~~~G~-~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 116 (126)
T 1x5e_A 84 CKDGE-FRRYQGPRTKKDFINFISDKEWKSIEPV 116 (126)
T ss_dssp EETTE-EEECCSCCCHHHHHHHHHTCGGGGSCEE
T ss_pred EeCCe-EEEeecCCCHHHHHHHHHHHhhccCCCc
Confidence 99996 6889999999999999999987665544
No 45
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.85 E-value=1.2e-20 Score=141.50 Aligned_cols=103 Identities=24% Similarity=0.448 Sum_probs=97.2
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCC
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (405)
++.+++++|++.+.++++++|.||++||++|+.+.|.+.++++.+++ +.++.||++++++++++|++.++||++++++|
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 79 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKDG 79 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEETT
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEECC
Confidence 46789999999998889999999999999999999999999999986 99999999999999999999999999999999
Q ss_pred eeeeeecCCCCHHHHHHHHHhhhc
Q 015527 138 VRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+...++.|..+.+.+.+|+.+.++
T Consensus 80 ~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 80 EPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHT
T ss_pred eEhhhccCCCCHHHHHHHHHHHhc
Confidence 888999999999999999998764
No 46
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.85 E-value=7.2e-21 Score=148.27 Aligned_cols=105 Identities=21% Similarity=0.405 Sum_probs=98.3
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..++.++.++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++||+++|
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 468899999999655 6789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++|+.+.++.|..+.+.|.+||++.+
T Consensus 102 ~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 102 KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 99988899999999999999998875
No 47
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.85 E-value=1.1e-20 Score=143.64 Aligned_cols=103 Identities=28% Similarity=0.524 Sum_probs=96.7
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC---CcEEEEEeCcccHhHHHhCCCcccceEE
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
..+..+++++|++.+. +++++|.||++||++|+.+.|.+.++++.+.. ++.++.||++++++++++|+|.++||++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEE
Confidence 5789999999999987 78999999999999999999999999998753 6999999999999999999999999999
Q ss_pred EEeCCeeeeeecCCCCHHHHHHHHHhh
Q 015527 133 LFVAGVRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
++++|+.+.++.|..+.+.|.+||.+.
T Consensus 84 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 84 LFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 999999999999999999999999875
No 48
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.85 E-value=2e-20 Score=143.12 Aligned_cols=106 Identities=19% Similarity=0.330 Sum_probs=99.6
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..+..+++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++|+++++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 86 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLV 86 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEE
Confidence 468999999999775 6789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++|+...++.|..+.+.+.+||.+.++
T Consensus 87 ~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 87 KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 999888999999999999999998875
No 49
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.85 E-value=1.4e-20 Score=142.00 Aligned_cols=104 Identities=23% Similarity=0.383 Sum_probs=96.9
Q ss_pred CcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 57 DVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 57 ~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
.+..+++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 36789999999866 66889999999999999999999999999999878999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+|+...++.|..+.+.+.++|.+.+
T Consensus 82 ~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 82 GGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9988899999999999999998765
No 50
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.85 E-value=2.6e-21 Score=145.44 Aligned_cols=98 Identities=9% Similarity=0.116 Sum_probs=80.3
Q ss_pred ChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCeeee
Q 015527 62 NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQF 141 (405)
Q Consensus 62 ~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~ 141 (405)
+.++|++.+.++++++|.|||+||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||+++|++|+.+.
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~ 85 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEIL 85 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEEEEEETTEEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEEE
Confidence 345666677788999999999999999999999999999985 7999999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHHHHHhhh
Q 015527 142 QFFGERTRDVISAWVREKM 160 (405)
Q Consensus 142 ~~~g~~~~~~l~~~i~~~~ 160 (405)
++.|..+.+.|.++|++++
T Consensus 86 ~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 86 RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEESSCCHHHHHHHHHTTC
T ss_pred EEeCCcCHHHHHHHHHHhh
Confidence 9999999999999998764
No 51
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=1.6e-20 Score=147.00 Aligned_cols=108 Identities=28% Similarity=0.461 Sum_probs=99.0
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEE
Q 015527 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
....+..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+++.+.|+.||++++++++++|+|.++||++
T Consensus 15 ~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 94 (130)
T 2dml_A 15 SSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIK 94 (130)
T ss_dssp TTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEE
T ss_pred CCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEE
Confidence 45678999999999855 67889999999999999999999999999999878999999999999999999999999999
Q ss_pred EEeCCee-eeeecCCCCHHHHHHHHHhhhc
Q 015527 133 LFVAGVR-QFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 133 ~~~~g~~-~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+|++|.. ..++.|..+.+.+.+|+.+.+.
T Consensus 95 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 95 IFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 9996644 7899999999999999998874
No 52
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.84 E-value=3.3e-21 Score=148.70 Aligned_cols=110 Identities=36% Similarity=0.609 Sum_probs=101.6
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC---CcEEEEEeCcccHhHHHhCCCcccce
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPT 130 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (405)
....+..+++++|+..+.++++++|.||++||++|+.+.|.+.++++.+++ ++.++.||++++++++++|+|.++||
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 84 (120)
T 1mek_A 5 EEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPT 84 (120)
T ss_dssp EETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSE
T ss_pred CCCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccE
Confidence 345789999999999998899999999999999999999999999999874 69999999999999999999999999
Q ss_pred EEEEeCCeee--eeecCCCCHHHHHHHHHhhhcCC
Q 015527 131 LYLFVAGVRQ--FQFFGERTRDVISAWVREKMTLG 163 (405)
Q Consensus 131 ~~~~~~g~~~--~~~~g~~~~~~l~~~i~~~~~~~ 163 (405)
+++|++|+.. .++.|..+.+.+.+||.+.++++
T Consensus 85 ~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 85 IKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 9999999766 89999999999999999988765
No 53
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.84 E-value=3.2e-20 Score=139.98 Aligned_cols=102 Identities=23% Similarity=0.287 Sum_probs=91.2
Q ss_pred cEEc-ChhhHHHHH--cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 58 VVSL-NGKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 58 ~~~l-~~~~~~~~~--~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
+..+ +.++|++.+ .++++++|.||++||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||+++|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQCQGTAATNNISATPTFQFF 81 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHhcCCCcccEEEEE
Confidence 4455 578999888 578999999999999999999999999999995 799999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++|+.+.++.|. +.++|.++|.+.++
T Consensus 82 ~~G~~~~~~~G~-~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 82 RNKVRIDQYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp ETTEEEEEEESS-CHHHHHHHHHHHHC
T ss_pred ECCeEEEEEeCC-CHHHHHHHHHHhcC
Confidence 999888999995 45569999988763
No 54
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.84 E-value=3.1e-20 Score=139.56 Aligned_cols=103 Identities=26% Similarity=0.462 Sum_probs=95.8
Q ss_pred cEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeC
Q 015527 58 VVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (405)
Q Consensus 58 ~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~ 136 (405)
+..+++++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKN 81 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeC
Confidence 5688999999866 567899999999999999999999999999998889999999999999999999999999999999
Q ss_pred CeeeeeecCCCCHHHHHHHHHhhh
Q 015527 137 GVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
|+...++.|..+.+.+.++|.+.+
T Consensus 82 g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 82 GERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp TEEEEEEEECCCHHHHHHHHHHHC
T ss_pred CeEEEEEecCCCHHHHHHHHHhhC
Confidence 988999999999999999998753
No 55
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.84 E-value=3.8e-20 Score=145.96 Aligned_cols=107 Identities=23% Similarity=0.369 Sum_probs=97.9
Q ss_pred CCCcEEcChhhHHHHHc------------CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHh
Q 015527 55 AKDVVSLNGKNFSEFMG------------KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKE 122 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~~------------~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~ 122 (405)
...++.++.++|.+.+. ++++++|.||++||++|+.+.|.+.++++.+++++.|+.||++++++++++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence 35688999999998875 468999999999999999999999999999988899999999999999999
Q ss_pred CCCcccceEEEE-eCCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 123 YNILAYPTLYLF-VAGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 123 ~~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
|+|.++||+++| .+|+.. ++.|..+.+.|.++|.+.++.
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp TTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred cCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 999999999999 588665 889999999999999998854
No 56
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.84 E-value=5.2e-20 Score=142.64 Aligned_cols=103 Identities=18% Similarity=0.311 Sum_probs=96.3
Q ss_pred CcEEcCh-hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 57 DVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 57 ~~~~l~~-~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
-+..++. ++|++.+.++++++|.||++||++|+.+.|.+.++++.++ ++.|+.||++++++++++|+|.++||+++++
T Consensus 20 mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~ 98 (125)
T 1r26_A 20 SVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTFIIAR 98 (125)
T ss_dssp CCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEEEEEe
Confidence 4788998 9999999889999999999999999999999999999986 6999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+|+.+.++.| .+.+.|.++|.+.+.
T Consensus 99 ~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 99 SGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp TTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred CCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 9988899999 688999999988764
No 57
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.84 E-value=3.9e-20 Score=140.79 Aligned_cols=104 Identities=24% Similarity=0.416 Sum_probs=95.6
Q ss_pred CcEEc-ChhhHHHHHcC----CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceE
Q 015527 57 DVVSL-NGKNFSEFMGK----NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 57 ~~~~l-~~~~~~~~~~~----~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (405)
.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++||+
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEE
Confidence 46677 57899988865 89999999999999999999999999999987899999999999999999999999999
Q ss_pred EEEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 132 YLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+++++|+...++.|. +.+.+.++|.+.+.
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 83 HVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 999999888999998 99999999988763
No 58
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.84 E-value=2.2e-20 Score=151.02 Aligned_cols=111 Identities=11% Similarity=0.212 Sum_probs=97.2
Q ss_pred CCCcEEcChhhHHHHHcC--CCcEEEEEec-------CCChhHhhhHHHHHHHHHHcc-----CCcEEEEEeCcccHhHH
Q 015527 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYA-------NWCYWSKKLAPEFAAAAKMLK-----GEADLVMVDAYLEKDLA 120 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~--~~~~~v~f~a-------~~C~~C~~~~~~~~~~~~~~~-----~~v~~~~v~~~~~~~~~ 120 (405)
...++.+|+++|++.+.+ +.+++|.||| +||++|+.+.|.|+++++++. +++.|+.||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 357999999999998854 4579999999 499999999999999999998 78999999999999999
Q ss_pred HhCCCcccceEEEEeCCeee------------eee---cC-CCCHHHHHHHHHhhhcCCcc
Q 015527 121 KEYNILAYPTLYLFVAGVRQ------------FQF---FG-ERTRDVISAWVREKMTLGTY 165 (405)
Q Consensus 121 ~~~~i~~~Pt~~~~~~g~~~------------~~~---~g-~~~~~~l~~~i~~~~~~~~~ 165 (405)
++|||+++||+++|++|... .+| .| .++++.|.+||.+.++..+.
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~ 157 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISIT 157 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCcc
Confidence 99999999999999977422 345 35 89999999999999986654
No 59
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.84 E-value=2.5e-20 Score=148.10 Aligned_cols=109 Identities=20% Similarity=0.397 Sum_probs=96.3
Q ss_pred CccCCCcEEcChhhHHHHHcC------------CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhH
Q 015527 52 LLYAKDVVSLNGKNFSEFMGK------------NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDL 119 (405)
Q Consensus 52 ~~~~~~~~~l~~~~~~~~~~~------------~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~ 119 (405)
......++.++.++|...+.. +++++|.||++||++|+.+.|.+.++++.+++++.|+.||+++++++
T Consensus 18 ~~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 97 (141)
T 3hxs_A 18 EKPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPEL 97 (141)
T ss_dssp -----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHH
T ss_pred cCCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHH
Confidence 335567899999999988853 78999999999999999999999999999998899999999999999
Q ss_pred HHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 120 AKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 120 ~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+++|+|.++||+++|+ +|+. .++.|..+.+.|.++|.+++.
T Consensus 98 ~~~~~v~~~Pt~~~~~~~g~~-~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 98 ARDFGIQSIPTIWFVPMKGEP-QVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHTTCCSSSEEEEECSSSCC-EEEESCCCHHHHHHHHHHTTC
T ss_pred HHHcCCCCcCEEEEEeCCCCE-EEEeCCCCHHHHHHHHHHHHc
Confidence 9999999999999996 6744 589999999999999998764
No 60
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.84 E-value=5e-20 Score=139.93 Aligned_cols=104 Identities=21% Similarity=0.331 Sum_probs=94.9
Q ss_pred CCCcEEcChhhHHHHHc--CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc-ccHhHHHhCCCcccceE
Q 015527 55 AKDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTL 131 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~-~~~~~~~~~~i~~~Pt~ 131 (405)
...+..+++++|++.+. ++++++|.||++||++|+.+.|.++++++.++ ++.|+.||++ ++++++++|+|.++||+
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~~~~~~~~v~~~Pt~ 82 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTF 82 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSBSSEE
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCcchHHHHHHcCCCeeeEE
Confidence 46789999999999886 58899999999999999999999999999987 5999999998 78999999999999998
Q ss_pred EEEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 132 YLFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+++++|+.+.++.|.. .+.|.++|.+.+
T Consensus 83 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 83 KILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp EEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 8888998888999984 899999998764
No 61
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.84 E-value=3.5e-20 Score=143.17 Aligned_cols=108 Identities=19% Similarity=0.370 Sum_probs=98.7
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEE
Q 015527 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
....+..++.++|...+ .++++++|.||++||++|+.+.|.+.++++.+++++.|+.||++++++++++|+|.++||++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 89 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 89 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 34578899999999655 67889999999999999999999999999999878999999999999999999999999999
Q ss_pred EEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 133 LFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++++|+.+.++.|..+.+.+.++|.+.++
T Consensus 90 ~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 90 LFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred EEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 99999888999999999999999987763
No 62
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.84 E-value=4.9e-20 Score=140.19 Aligned_cols=103 Identities=19% Similarity=0.377 Sum_probs=96.6
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
.....++.++|++.+.++++++|.||++||++|+.+.|.+.++++.++ ++.|+.||++++++++++|+|.++||+++++
T Consensus 9 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 87 (112)
T 1syr_A 9 MVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSMPTFKVYK 87 (112)
T ss_dssp CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHHHHHHTTCCSSSEEEEEE
T ss_pred eEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHHHHHHcCCCcccEEEEEE
Confidence 566789999999999889999999999999999999999999999987 5999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+|+.+.++.|. +.+.|.++|.+.+
T Consensus 88 ~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 88 NGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp TTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred CCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 99888999999 9999999998764
No 63
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.4e-20 Score=140.50 Aligned_cols=103 Identities=16% Similarity=0.295 Sum_probs=90.6
Q ss_pred cEEcCh-hhHHHHHcC---CCcEEEEEecCCChhHhhhHHHHHHHHHHcc-CCcEEEEEeCcccHhHHHhCCCcccceEE
Q 015527 58 VVSLNG-KNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-GEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 58 ~~~l~~-~~~~~~~~~---~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~-~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
+..++. ++|++.+.+ +++++|.||++||++|+.+.|.++++++.++ .++.|+.||++++++++++|+|.++||++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 567776 999998875 8999999999999999999999999999863 37999999999999999999999999999
Q ss_pred EEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 133 LFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++++|+.+.++.|. ..++|.++|.+.+.
T Consensus 82 ~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 82 IIHKGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEETTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 99999989999998 45579999988764
No 64
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.83 E-value=2e-20 Score=144.78 Aligned_cols=107 Identities=27% Similarity=0.448 Sum_probs=96.3
Q ss_pred CCcEEcChhhHHH-HHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSLNGKNFSE-FMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l~~~~~~~-~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..+..+++++|.. .+.++++++|.||++||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++||+++|
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 82 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLY 82 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEE
Confidence 4688999999965 557789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeeeeeecCC----CCHHHHHHHHHhhhcC
Q 015527 135 VAGVRQFQFFGE----RTRDVISAWVREKMTL 162 (405)
Q Consensus 135 ~~g~~~~~~~g~----~~~~~l~~~i~~~~~~ 162 (405)
++|....++.|. .+.+.|.+||.+.+..
T Consensus 83 ~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 83 QYERAKKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEGGGTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred eCCCccceeeccccCcCCHHHHHHHHHHHHHh
Confidence 865457777775 8999999999988753
No 65
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.83 E-value=8.2e-20 Score=137.48 Aligned_cols=102 Identities=22% Similarity=0.422 Sum_probs=93.3
Q ss_pred cEEcCh-hhHHHHHc--CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 58 VVSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 58 ~~~l~~-~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
+..++. ++|++.+. ++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|++.++||++++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 456777 88998886 789999999999999999999999999999977899999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++|+...++.| .+.+.+.++|++.+
T Consensus 82 ~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 82 KNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp ETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred cCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 99988899999 78999999998653
No 66
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.83 E-value=9.6e-20 Score=140.90 Aligned_cols=104 Identities=22% Similarity=0.322 Sum_probs=96.0
Q ss_pred CCcEEcChhhHHHHHc----CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceE
Q 015527 56 KDVVSLNGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~----~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (405)
..+..++.++|+..+. ++++++|.||++||++|+.+.|.|+++++.+++ +.|+.||++++++++++|+|.++||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEE
Confidence 4567789999998774 589999999999999999999999999999986 99999999999999999999999999
Q ss_pred EEEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 132 YLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+++++|+.+.++.|.. .+.+.++|.+.+.
T Consensus 92 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 92 LFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 9999998889999999 9999999998874
No 67
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.83 E-value=3.7e-20 Score=148.01 Aligned_cols=100 Identities=14% Similarity=0.161 Sum_probs=93.0
Q ss_pred cChhhHHHHH--cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCe
Q 015527 61 LNGKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGV 138 (405)
Q Consensus 61 l~~~~~~~~~--~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~ 138 (405)
.+.++|++.+ .++++++|+|||+||++|+.+.|.++++++++++.+.|+.||++++++++++|+|.++||++++++|+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 88 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ 88 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe
Confidence 4678999887 56899999999999999999999999999999878999999999999999999999999999999998
Q ss_pred ee---------eeecC-CCCHHHHHHHHHhhh
Q 015527 139 RQ---------FQFFG-ERTRDVISAWVREKM 160 (405)
Q Consensus 139 ~~---------~~~~g-~~~~~~l~~~i~~~~ 160 (405)
.+ .++.| ..+.++|.++|++..
T Consensus 89 ~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 89 HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp EEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred EEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 88 89999 899999999998775
No 68
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.83 E-value=1.1e-19 Score=136.63 Aligned_cols=97 Identities=25% Similarity=0.387 Sum_probs=90.7
Q ss_pred ChhhHHHHHc--CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCee
Q 015527 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (405)
Q Consensus 62 ~~~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~ 139 (405)
+.++|++.+. ++++++|.||++||++|+.+.|.++++++.+++ +.|+.||++++++++++|+|.++||++++++|+.
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 85 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQK 85 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeE
Confidence 5678888886 789999999999999999999999999999975 9999999999999999999999999999999999
Q ss_pred eeeecCCCCHHHHHHHHHhhh
Q 015527 140 QFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 140 ~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+.++.|. +.+.+.+++.+.+
T Consensus 86 ~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 86 VGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEeCC-CHHHHHHHHHHhC
Confidence 9999999 9999999998764
No 69
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.83 E-value=5.6e-20 Score=164.40 Aligned_cols=107 Identities=22% Similarity=0.405 Sum_probs=100.9
Q ss_pred CCCcEEcChhhHHHHHcC--CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEE
Q 015527 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~--~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
...++++|.++|++.+.. +++++|+||++||++|+.+.|.++++++++++++.|+.|||+++++++++|+|.++||++
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 85 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVY 85 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEE
Confidence 357899999999998854 799999999999999999999999999999988999999999999999999999999999
Q ss_pred EEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 133 LFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+|++|+.+.++.|..+.+.+..|+.+.++
T Consensus 86 ~~~~G~~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 86 LFQNGQPVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred EEECCEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 99999999999999999999999998874
No 70
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.83 E-value=1.7e-20 Score=146.43 Aligned_cols=98 Identities=17% Similarity=0.242 Sum_probs=89.6
Q ss_pred cChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCeee
Q 015527 61 LNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQ 140 (405)
Q Consensus 61 l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~ 140 (405)
++++.++....++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++++|+.+
T Consensus 30 ~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 30 NGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp CCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 34444555556789999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred eeecCCCCHHHHHHHHHh
Q 015527 141 FQFFGERTRDVISAWVRE 158 (405)
Q Consensus 141 ~~~~g~~~~~~l~~~i~~ 158 (405)
.++.|..+.++|.++|++
T Consensus 110 ~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 110 ARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEESSCCCHHHHHHHHTT
T ss_pred EEecCCCCHHHHHHHHHh
Confidence 999999999999999975
No 71
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.83 E-value=8e-20 Score=156.66 Aligned_cols=113 Identities=19% Similarity=0.354 Sum_probs=103.6
Q ss_pred CCccCCCcEEcChhhHHHH-HcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccc
Q 015527 51 PLLYAKDVVSLNGKNFSEF-MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (405)
Q Consensus 51 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (405)
+......+..+|+++|++. +.++++++|+|||+||++|+.+.|.|+++++.+++++.|+.||++.+++++++|+|.++|
T Consensus 7 ~~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~P 86 (222)
T 3dxb_A 7 HHPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIP 86 (222)
T ss_dssp --CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBS
T ss_pred CCCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCC
Confidence 3445678899999999975 578899999999999999999999999999999988999999999999999999999999
Q ss_pred eEEEEeCCeeeeeecCCCCHHHHHHHHHhhhcCC
Q 015527 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKMTLG 163 (405)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (405)
|++++++|+.+.++.|..+.+.+.++|.+.+...
T Consensus 87 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 87 TLLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred EEEEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 9999999999999999999999999999998543
No 72
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.82 E-value=4.1e-20 Score=145.51 Aligned_cols=105 Identities=14% Similarity=0.197 Sum_probs=96.3
Q ss_pred CCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC---------cccHhHHHhCCC
Q 015527 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA---------YLEKDLAKEYNI 125 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~---------~~~~~~~~~~~i 125 (405)
...+..++.++|++.+.+ +++|+|||+||++|+.+.|.+++++++++ +.|+.||+ +++++++++|+|
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v 90 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGV 90 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTC
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCC
Confidence 356889999999999976 99999999999999999999999999986 99999999 889999999999
Q ss_pred cccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhcCC
Q 015527 126 LAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLG 163 (405)
Q Consensus 126 ~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (405)
.++||++++++|+.+.++.|..+.+.+.+++++++.++
T Consensus 91 ~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 91 EGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp CSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred ceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999988654
No 73
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.82 E-value=1.6e-20 Score=145.13 Aligned_cols=105 Identities=21% Similarity=0.402 Sum_probs=91.6
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCCh--------------hHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHH
Q 015527 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCY--------------WSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA 120 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~--------------~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~ 120 (405)
..+..+++++|++.+ .++++++|.|||+||+ +|+.+.|.++++++.+++++.++.||++++++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 467899999998654 7789999999999999 9999999999999999878999999999999999
Q ss_pred HhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 121 ~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++|+|.++||+++|++|+.+.++.|..+.+++.++|++.+
T Consensus 83 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999988999999999999999998765
No 74
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.82 E-value=1.3e-19 Score=138.97 Aligned_cols=101 Identities=26% Similarity=0.448 Sum_probs=93.1
Q ss_pred CcEEcCh-hhHHHHHc--CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEE
Q 015527 57 DVVSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (405)
Q Consensus 57 ~~~~l~~-~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (405)
.+..++. ++|+..+. ++++++|.||++||++|+.+.|.++++++.+ ++.++.||++++++++++|+|.++||+++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 3778887 99998886 7899999999999999999999999999988 79999999999999999999999999999
Q ss_pred EeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+++|+.+.++.| .+.+.+.++|++.+
T Consensus 92 ~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 92 IKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 999988899999 68899999998753
No 75
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.82 E-value=2.1e-19 Score=139.19 Aligned_cols=105 Identities=25% Similarity=0.357 Sum_probs=94.8
Q ss_pred cCCCcEEc-ChhhHHHHHc----CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCccc
Q 015527 54 YAKDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAY 128 (405)
Q Consensus 54 ~~~~~~~l-~~~~~~~~~~----~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~ 128 (405)
+...+..+ +.++|+..+. ++++++|.||++||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSS
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCcc
Confidence 34567777 7789998774 48999999999999999999999999999987 799999999999999999999999
Q ss_pred ceEEEEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 129 PTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 129 Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
||++++++|+.+.++.| .+.+.+.++|.+.+
T Consensus 93 Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 99999999988899999 58999999998765
No 76
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.82 E-value=2e-20 Score=147.64 Aligned_cols=111 Identities=9% Similarity=0.131 Sum_probs=83.3
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCC--ChhHhhhHHHHHHHHHHccCCcE--EEEEeCcccHhHHHhCCCcccceEE
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW--CYWSKKLAPEFAAAAKMLKGEAD--LVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~--C~~C~~~~~~~~~~~~~~~~~v~--~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
.+..++.++|++.+.+++.++|.||++| |++|+.+.|.|+++++++ +++. |+.||++++++++++|+|.++||++
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~ 96 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRFPATL 96 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSSSEEE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcCCeEE
Confidence 5788999999999988888999999987 999999999999999999 7788 9999999999999999999999999
Q ss_pred EEeCCeeeeeecCCCCHHHHHHHHHhhhcCCccccC
Q 015527 133 LFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSIT 168 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~ 168 (405)
+|++|+.+.++.|..+.+.|.++|.+.+..+...+.
T Consensus 97 ~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~ 132 (142)
T 2es7_A 97 VFTDGKLRGALSGIHPWAELLTLMRSIVDTPAAQET 132 (142)
T ss_dssp EESCC----CEESCCCHHHHHHHHHHHHC-------
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHhcccccCCC
Confidence 999999999999999999999999999977665543
No 77
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.82 E-value=1.2e-19 Score=138.38 Aligned_cols=101 Identities=22% Similarity=0.386 Sum_probs=91.0
Q ss_pred CCcEEcC-hhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l~-~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..+..++ .++|++.+.++++++|.||++||++|+.+.|.++++++++++ +.|+.||++++++++++|+|.++||++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 90 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLG 90 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEE
Confidence 3444444 567788888899999999999999999999999999999986 99999999999999999999999999999
Q ss_pred eCCeeeeeecCCCCHHHHHHHHHh
Q 015527 135 VAGVRQFQFFGERTRDVISAWVRE 158 (405)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~ 158 (405)
++|+.+.++.|.. .+.|.++|++
T Consensus 91 ~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 91 KDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp ETTEEEEEEESSC-HHHHHHHHHT
T ss_pred eCCeEEEEEeCCC-HHHHHHHHHh
Confidence 9999889999998 9999999875
No 78
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.82 E-value=2.2e-20 Score=144.26 Aligned_cols=106 Identities=25% Similarity=0.513 Sum_probs=94.7
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-----CcEEEEEeCcccHhHHHhCCCcc
Q 015527 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-----EADLVMVDAYLEKDLAKEYNILA 127 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-----~v~~~~v~~~~~~~~~~~~~i~~ 127 (405)
....+..+++++|++.+ .++++++|+|||+||++|+.+.|.|+++++.+++ ++.|+.||+++++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 45678999999999886 6789999999999999999999999999999986 7999999999876 555 9999
Q ss_pred cceEEEEeCCee--eeeecCCCCHHHHHHHHHhhhcC
Q 015527 128 YPTLYLFVAGVR--QFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 128 ~Pt~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
+||+++|++|.. ..++.|..+.+.|.+||.+.+..
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 999999996644 78899999999999999988754
No 79
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.82 E-value=2.5e-19 Score=134.26 Aligned_cols=100 Identities=24% Similarity=0.437 Sum_probs=91.2
Q ss_pred EEcCh-hhHHHHHc--CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 59 VSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 59 ~~l~~-~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
..++. ++|++.+. ++++++|.||++||++|+.+.|.+.++++.++ ++.|+.||++++++++++|+|.++||+++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 35555 88998886 78999999999999999999999999999987 7999999999999999999999999999999
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+|+...++.| .+.+.+.++|.+.+
T Consensus 81 ~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 81 DGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp TTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred CCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 9988899999 68999999998753
No 80
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.82 E-value=8e-20 Score=138.45 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=92.8
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCC
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (405)
+..++.++| +.+.++++++|.||++||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||+++|++|
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 82 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTLVFIRDG 82 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESS
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEEEEEECC
Confidence 345778899 677778999999999999999999999999999886 699999999999999999999999999999999
Q ss_pred eeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 138 VRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
+.+.++.|..+.+.|.+++.+..++
T Consensus 83 ~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 83 KVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SEEEEEESCCCHHHHHHHHHTC---
T ss_pred EEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 9999999999999999999887654
No 81
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.82 E-value=5.4e-20 Score=141.39 Aligned_cols=103 Identities=13% Similarity=0.139 Sum_probs=89.9
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC----cccHhHHHhCCCcccceE
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA----YLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~----~~~~~~~~~~~i~~~Pt~ 131 (405)
..+..++.++|+..+.++++++|+|||+||++|+.+.|.+.++++.++..+.++.++. +..++++++|+|.++||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~ 91 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGF 91 (118)
T ss_dssp TTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEE
T ss_pred hhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeE
Confidence 4678899999999998899999999999999999999999999998875666664432 334678999999999999
Q ss_pred EEEeCCeeeeeecCCCCHHHHHHHHHh
Q 015527 132 YLFVAGVRQFQFFGERTRDVISAWVRE 158 (405)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (405)
+++++|+.+.++.|..+.+.|.+||.+
T Consensus 92 ~~~~~G~~~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 92 VHITDGQINVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp EEEETTEEEEECCTTCCHHHHHHHHTC
T ss_pred EEEECCEEEEEecCCCCHHHHHHHhhC
Confidence 999999888999999999999999853
No 82
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.82 E-value=6.4e-20 Score=142.74 Aligned_cols=96 Identities=17% Similarity=0.222 Sum_probs=89.3
Q ss_pred HHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEe--CcccHhHHHhCCCcccceEEEEe-CCeeeeeec
Q 015527 68 EFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD--AYLEKDLAKEYNILAYPTLYLFV-AGVRQFQFF 144 (405)
Q Consensus 68 ~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~--~~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~ 144 (405)
....++++++|.||++||++|+.+.|.+.++++.+++++.|+.|| ++++++++++|+|.++||+++++ +|+.+.++.
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~ 100 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQ 100 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEE
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEec
Confidence 445678999999999999999999999999999997789999999 99999999999999999999999 998889999
Q ss_pred CCCCHHHHHHHHHhhhcCC
Q 015527 145 GERTRDVISAWVREKMTLG 163 (405)
Q Consensus 145 g~~~~~~l~~~i~~~~~~~ 163 (405)
|..+.+.|.++|++.+.+.
T Consensus 101 G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 101 GLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp SCCCHHHHHHHHHHHCCCC
T ss_pred CCCCHHHHHHHHHHHhccc
Confidence 9999999999999988654
No 83
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.82 E-value=3.2e-19 Score=138.33 Aligned_cols=103 Identities=20% Similarity=0.327 Sum_probs=94.3
Q ss_pred CCcEEcChhhHHHHHc--CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc-ccHhHHHhCCCcccceEE
Q 015527 56 KDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~-~~~~~~~~~~i~~~Pt~~ 132 (405)
..+..++.++|++.+. ++++++|.||++||++|+.+.|.+++++++++ ++.++.||++ ++++++++|+|.++||++
T Consensus 18 ~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~v~~~Pt~~ 96 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTFK 96 (124)
T ss_dssp TSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSSSSEEE
T ss_pred CceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCcchHHHHHHcCCCeeeEEE
Confidence 5688999999998885 68999999999999999999999999999987 5999999998 689999999999999999
Q ss_pred EEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++++|+.+.++.|.. .+++.++|.+..
T Consensus 97 ~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 97 ILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 999998889999986 899999998754
No 84
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.81 E-value=2.7e-17 Score=157.81 Aligned_cols=305 Identities=16% Similarity=0.234 Sum_probs=226.9
Q ss_pred CCcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l-~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..+..+ +.++++..+..++.++|.|+.++|..| .+.|.+++..+.+++.|+.++ +.+++++|++...| +++|
T Consensus 110 ~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~~~~F~~~~---~~~~~~~~~v~~~~-i~~~ 182 (481)
T 3f8u_A 110 PASVPLRTEEEFKKFISDKDASIVGFFDDSFSEA---HSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNGEG-IILF 182 (481)
T ss_dssp CSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHH---HHHHHHHHHHHTTTSCEEEEC---CHHHHHHHCSSSEE-EEEE
T ss_pred cCceecCCHHHHHHHHhcCCcEEEEEECCCccch---HHHHHHHHHHhccCceEEEEC---CHHHHHHhCCCCCc-EEEE
Confidence 345666 678888888888999999999887655 578999999998889999764 67899999999866 7777
Q ss_pred e------C-Ceeeeeec-CCCCHHHHHHHHHhhhcCCccccCChhHHHHHhccCCeEEEEEEcCCCCc-------cHHHH
Q 015527 135 V------A-GVRQFQFF-GERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGM-------ESEEL 199 (405)
Q Consensus 135 ~------~-g~~~~~~~-g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~-------~~~~~ 199 (405)
+ . +.....|. |..+.+.|.+||....-|.+.+++. +....+.+ ...++.|+...... ....+
T Consensus 183 ~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~-~n~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~ 259 (481)
T 3f8u_A 183 RPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLIQG--KDLLIAYYDVDYEKNAKGSNYWRNRV 259 (481)
T ss_dssp CCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECT-TTHHHHTT--SSEEEEEECCCTTTCHHHHHHHHHHH
T ss_pred ecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccCh-hHHHHhcC--CCceEEEEecccccchhhHHHHHHHH
Confidence 6 1 22557788 8899999999999999888888854 45555543 34445555432222 13446
Q ss_pred HHHh-ccCCc---ceEEEecCHH---HHhhcCCCC-CCCCCeEEEeecCCCccccccCCCCHH--HHHHHHhccC-----
Q 015527 200 AAAS-KLHSD---VNFYQTTSAD---VAEFFHIHP-KSKRPALIFLHLEAGKATPFRHQFTRL--AIANFVTHTK----- 264 (405)
Q Consensus 200 ~~~a-~~~~~---~~f~~~~~~~---l~~~~~~~~-~~~~p~i~~~~~~~~~~~~y~g~~~~~--~l~~fi~~~~----- 264 (405)
..+| ++.++ +.|+.+.... ..+.||++. ....|.++++.. ++..+.+++.++.+ +|.+|+....
T Consensus 260 ~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~~-~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~ 338 (481)
T 3f8u_A 260 MMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDGNLK 338 (481)
T ss_dssp HHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEECS-SSCEEECCSCCCTTSHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEcC-CCcccCCCcccCccHHHHHHHHHHHhcCCcc
Confidence 6667 45555 8998875443 556888863 124799998874 44566777888888 9999987421
Q ss_pred ------------CCCccccccccccccccC-CccE-EEEEecCCC-cHHHHHHHHHHHHHhcC--cEEEEEEEcCCcchh
Q 015527 265 ------------HPLVVTLTIHNAQFVFQD-PRKQ-LWLFAPAYG-SDKVILTFEEVAKALKG--KLLHVYVEMNSEGVG 327 (405)
Q Consensus 265 ------------~p~v~~l~~~~~~~~~~~-~~~~-~i~f~~~~~-~~~~~~~~~~va~~~~~--~~~f~~id~~~~~~~ 327 (405)
...+..++..++..+... ++++ +.++++||. |+...+.|.++++++.+ ++.|+.+|++..
T Consensus 339 ~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~--- 415 (481)
T 3f8u_A 339 RYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN--- 415 (481)
T ss_dssp CCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS---
T ss_pred cccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch---
Confidence 123566777888776655 4444 446778888 99999999999999987 699999999864
Q ss_pred hhhhhhcCCCCCCCcEEEEEeCCCc--cccCCCCCCHHHHHHHHHHHhcCce
Q 015527 328 RRVSQEFGVSGNAPRVIAYSARDAK--KYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 328 ~~~~~~~gi~~~~~p~i~i~~~~~~--~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
.+.+.|++.. .|.+++++.++. ...+.|..+.+++.+||++......
T Consensus 416 -~~~~~~~v~~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~ 464 (481)
T 3f8u_A 416 -DVPSPYEVRG--FPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPP 464 (481)
T ss_dssp -CCCTTCCCCS--SSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCC
T ss_pred -hhHhhCCCcc--cCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCcc
Confidence 5667888865 789988887554 5778999999999999999887755
No 85
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.81 E-value=4.1e-19 Score=143.00 Aligned_cols=105 Identities=19% Similarity=0.303 Sum_probs=95.9
Q ss_pred CCcEEcC-hhhHHHHHcC--CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEE
Q 015527 56 KDVVSLN-GKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 56 ~~~~~l~-~~~~~~~~~~--~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
..+..++ .++|+..+.+ +++++|.||++||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 90 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEISSVPTFL 90 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 4677776 6999988866 8999999999999999999999999999985 6999999999999999999999999999
Q ss_pred EEeCCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 133 LFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
+|++|+.+.++.|. +.+.|.++|.+.++.
T Consensus 91 ~~~~G~~~~~~~G~-~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 91 FFKNSQKIDRLDGA-HAPELTKKVQRHASS 119 (153)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHSCT
T ss_pred EEECCEEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 99999888889995 788999999999854
No 86
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.81 E-value=2.5e-19 Score=138.24 Aligned_cols=106 Identities=23% Similarity=0.400 Sum_probs=96.4
Q ss_pred cCCCcEEcCh-hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCC-cEEEEEeCcccHhHHHhCCCcccceE
Q 015527 54 YAKDVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE-ADLVMVDAYLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 54 ~~~~~~~l~~-~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (405)
....+..++. ++|++.+.++++++|.||++||++|+.+.|.++++++.+++. +.|+.||++++++++++|+|.++||+
T Consensus 13 ~~~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~ 92 (121)
T 2j23_A 13 PRGSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTF 92 (121)
T ss_dssp CCCCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred CCcceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEE
Confidence 4455666665 899999988999999999999999999999999999998864 99999999999999999999999999
Q ss_pred EEEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 132 YLFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+++++|+.+.++.|. +.+.|.++|.+.+
T Consensus 93 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 93 VFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 999999888999999 9999999998765
No 87
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.7e-20 Score=148.27 Aligned_cols=104 Identities=21% Similarity=0.322 Sum_probs=94.2
Q ss_pred CCcEEcChhhHHHHHcCC--CcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcccHhHHHhCCCc------
Q 015527 56 KDVVSLNGKNFSEFMGKN--RNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL------ 126 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~--~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i~------ 126 (405)
..+..++.++|++.+.++ ++++|+|||+||++|+.+.|.|+++++++++ ++.|+.||++++++++++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcC
Confidence 468899999999888544 4899999999999999999999999999986 8999999999999999999999
Q ss_pred ccceEEEEeCCeeeeeecCCCCHHHHHHHHHhh
Q 015527 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
++||+++|++|+.+.++.|..+.+.+.+|+.+.
T Consensus 87 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 87 QLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp CSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred CCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 999999999998899999998888877776554
No 88
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.80 E-value=5.6e-19 Score=134.27 Aligned_cols=100 Identities=13% Similarity=0.209 Sum_probs=86.4
Q ss_pred CCcEEcChhhHHHHHcC-CC--cEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEE
Q 015527 56 KDVVSLNGKNFSEFMGK-NR--NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~-~~--~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
..+.+++.++|.+.+.+ ++ +++|.|||+||++|+.+.|.++++++++. ++.|++||+++. +++|+|.++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~---~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC---IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT---STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh---HHHCCCCCCCEEE
Confidence 35788999999987743 33 89999999999999999999999999997 699999999886 5899999999999
Q ss_pred EEeCCeeeeeecCCC-------CHHHHHHHHHhh
Q 015527 133 LFVAGVRQFQFFGER-------TRDVISAWVREK 159 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~-------~~~~l~~~i~~~ 159 (405)
+|++|+.+.++.|.. +.+.+..+|.+.
T Consensus 79 ~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 79 VYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999999999854 567777777653
No 89
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.80 E-value=1.2e-18 Score=133.81 Aligned_cols=105 Identities=29% Similarity=0.409 Sum_probs=94.7
Q ss_pred CCcEEc-ChhhHHHHHcC----CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccce
Q 015527 56 KDVVSL-NGKNFSEFMGK----NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (405)
Q Consensus 56 ~~~~~l-~~~~~~~~~~~----~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (405)
..++.+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt 84 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAMPT 84 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSBSE
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcCcE
Confidence 456777 57899988754 8999999999999999999999999999987 79999999999999999999999999
Q ss_pred EEEEeCCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
++++++|+.+.++.| .+.+.+.++|.+.+..
T Consensus 85 ~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred EEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999999988889999 5899999999988754
No 90
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.80 E-value=3.5e-19 Score=141.09 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=86.5
Q ss_pred ChhhHHHHHc--CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCee
Q 015527 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (405)
Q Consensus 62 ~~~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~ 139 (405)
++++|+..+. ++++++|+|||+||++|+.+.|.++++++++++++.|+.||++++++++++|+|.++||+++|++|+.
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKH 89 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcE
Confidence 5788987663 58999999999999999999999999999997789999999999999999999999999999999977
Q ss_pred ee---------eecCCCC-HHHHHHHHHhhh
Q 015527 140 QF---------QFFGERT-RDVISAWVREKM 160 (405)
Q Consensus 140 ~~---------~~~g~~~-~~~l~~~i~~~~ 160 (405)
+. ++.|..+ .+++.++|++.+
T Consensus 90 v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 90 IMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp EEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred EEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 65 3455554 888888887766
No 91
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=4.7e-20 Score=144.96 Aligned_cols=111 Identities=25% Similarity=0.498 Sum_probs=97.3
Q ss_pred cCCCcEEcChhhHHHHHc-CCCcEEEEEecCCChhHhhhHHHHHHHHHHcc--CCcEEEEEeCcccHhHHHhCCCcccce
Q 015527 54 YAKDVVSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLEKDLAKEYNILAYPT 130 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~-~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~--~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (405)
....+..+++++|+..+. ++++++|+||++||++|+.+.|.|+++++.++ +++.|+.||+++++.++++|+|.++||
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 346789999999998775 48999999999999999999999999999997 379999999999999999999999999
Q ss_pred EEEEeCCeee--eeec-CCCCHHHHHHHHHhhhcCCc
Q 015527 131 LYLFVAGVRQ--FQFF-GERTRDVISAWVREKMTLGT 164 (405)
Q Consensus 131 ~~~~~~g~~~--~~~~-g~~~~~~l~~~i~~~~~~~~ 164 (405)
+++|++|... .+|. |..+.+.|.+||.+.+....
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 9999976433 3577 56899999999999986543
No 92
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.80 E-value=1.7e-18 Score=137.09 Aligned_cols=106 Identities=16% Similarity=0.328 Sum_probs=95.5
Q ss_pred CCCcEEcC-hhhHHHHH----cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccc
Q 015527 55 AKDVVSLN-GKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (405)
Q Consensus 55 ~~~~~~l~-~~~~~~~~----~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (405)
...++.++ .++|++.+ .++++++|.||++||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++|
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 101 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKATP 101 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEES
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCccc
Confidence 34566664 79999877 358899999999999999999999999999985 6999999999999999999999999
Q ss_pred eEEEEeCCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
|++++++|+.+.++.|. +.+.+.++|.+.+..
T Consensus 102 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 102 TFFFLRDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp EEEEEETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred EEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 99999999989999998 899999999988754
No 93
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.79 E-value=4.3e-18 Score=147.54 Aligned_cols=190 Identities=12% Similarity=0.090 Sum_probs=145.2
Q ss_pred hhHHHHHc-CCCcEEEEEecCC--ChhHhhhHHHHHHHHHHc---cCC--cEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 64 KNFSEFMG-KNRNVMVMFYANW--CYWSKKLAPEFAAAAKML---KGE--ADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 64 ~~~~~~~~-~~~~~~v~f~a~~--C~~C~~~~~~~~~~~~~~---~~~--v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
+.+...+. -.++++|.||++| |++|+.+.|.+.++++.+ +++ +.|+.+|+++++++|++|||.++||+.++
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 45556663 3479999999999 999999999999999985 333 99999999999999999999999999999
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhhc--CCccccCChhHHHHHhcc-CCeEEEEEEcCCCCccHHH---HHHHhccC---
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESEE---LAAASKLH--- 206 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~l~~-~~~~~v~f~~~~~~~~~~~---~~~~a~~~--- 206 (405)
+| ..+|.|....+.+..|+...+. .....+ +.+..+.+.+. .+..++.|+++||.++... +..++...
T Consensus 94 ~g--~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~ 170 (243)
T 2hls_A 94 GG--EVRWTGIPAGEEIRALVEVIMRLSEDESGL-EDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ 170 (243)
T ss_dssp TT--TEEEESCCCTTHHHHHHHHHHHHHTTCCCC-CHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT
T ss_pred CC--ceeEcCCCcHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc
Confidence 66 7889998888889998887652 222223 44455544433 4566888999999995544 55555322
Q ss_pred --CcceEEEe---cCHHHHhhcCCCCCCCCCeEEEeecCCCccccccCCCCHHHHHHHHhccCC
Q 015527 207 --SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKH 265 (405)
Q Consensus 207 --~~~~f~~~---~~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~ 265 (405)
.++.+..+ .+.+++++|++. ++|++++ ++ . ..|.|..+.++|.+||....-
T Consensus 171 ~~~~v~~~~vd~~~~~~~~~~~~V~---~vPt~~i--~G--~-~~~~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 171 GNPVILSEAVEAYENPDIADKYGVM---SVPSIAI--NG--Y-LVFVGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp TCCCEEEEEEETTTCHHHHHHTTCC---SSSEEEE--TT--E-EEEESCCCHHHHHHHHHHHHT
T ss_pred cCCcEEEEEEECccCHHHHHHcCCe---eeCeEEE--CC--E-EEEeCCCCHHHHHHHHHHHhh
Confidence 56777665 466789999998 4999987 22 3 348999999999999987543
No 94
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.79 E-value=1e-18 Score=134.10 Aligned_cols=104 Identities=19% Similarity=0.287 Sum_probs=91.0
Q ss_pred CcEEc--ChhhHHH-HHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEE
Q 015527 57 DVVSL--NGKNFSE-FMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (405)
Q Consensus 57 ~~~~l--~~~~~~~-~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (405)
.+..+ +.++|++ +..++++++|.||++||++|+.+.|.++++++.+ +++.|+.||++++++++++|+|.++||+++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~ 82 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALFF 82 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 46677 5788885 4467899999999999999999999999999999 689999999999999999999999999999
Q ss_pred EeC----CeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 134 FVA----GVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 134 ~~~----g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
|++ |+.+.++.|..+ ++|.+.+.+...+
T Consensus 83 ~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~ 114 (118)
T 2f51_A 83 VKKEGNEIKTLDQFVGADV-SRIKADIEKFKHH 114 (118)
T ss_dssp EEEETTEEEEEEEEESCCH-HHHHHHHHHHC--
T ss_pred EeCCCCcceEEEeecCCCH-HHHHHHHHHhhhc
Confidence 997 888899999865 5599999887754
No 95
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.79 E-value=8e-19 Score=133.68 Aligned_cols=103 Identities=26% Similarity=0.395 Sum_probs=93.4
Q ss_pred CCcEEc-ChhhHHHHHc----CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccce
Q 015527 56 KDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (405)
Q Consensus 56 ~~~~~l-~~~~~~~~~~----~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (405)
..+..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.++ ++.|+.||++++++++++|++.++||
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMPT 82 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTTE
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCcccE
Confidence 456777 6789998875 48899999999999999999999999999987 79999999999999999999999999
Q ss_pred EEEEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 131 LYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++++++|+.+.++.| .+.+.+.++|.+.+
T Consensus 83 ~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 83 FIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999999988889999 58899999998876
No 96
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.78 E-value=1.9e-18 Score=150.36 Aligned_cols=109 Identities=36% Similarity=0.546 Sum_probs=100.2
Q ss_pred CCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC---CcEEEEEeCcccHhHHHhCCCcccceE
Q 015527 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (405)
...+..++.++|+..+.++++++|.||++||++|+.+.|.|.++++.+.+ ++.|+.||++++++++++|+|.++||+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 208 (241)
T 3idv_A 129 PEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTL 208 (241)
T ss_dssp CCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEE
Confidence 34678899999999998889999999999999999999999999999876 399999999999999999999999999
Q ss_pred EEEeCCeeeeeecCCCCHHHHHHHHHhhhcCCc
Q 015527 132 YLFVAGVRQFQFFGERTRDVISAWVREKMTLGT 164 (405)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (405)
++|++|+.+. |.|.++.+.|.+||.+.+++.+
T Consensus 209 ~~~~~g~~~~-~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 209 KIFRKGRPYD-YNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp EEEETTEEEE-CCSCCSHHHHHHHHHHHTTCTT
T ss_pred EEEECCeEEE-ecCCCCHHHHHHHHHhhhCCCC
Confidence 9999996554 9999999999999999987653
No 97
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.78 E-value=9.3e-19 Score=137.18 Aligned_cols=123 Identities=16% Similarity=0.251 Sum_probs=108.4
Q ss_pred ccCCCCccccccccccccccCCccEEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCC
Q 015527 262 HTKHPLVVTLTIHNAQFVFQDPRKQLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNA 340 (405)
Q Consensus 262 ~~~~p~v~~l~~~~~~~~~~~~~~~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~ 340 (405)
..+.|++.++|.+++..+++.+.|+++.|...++ |+.+.+.++++|++|++++.|+++|.+++. +++..||+....
T Consensus 2 ~c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~---~~a~~~gi~~~~ 78 (133)
T 2djk_A 2 PLGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKAFG---AHAGNLNLKTDK 78 (133)
T ss_dssp CCSCCCSEECCHHHHHHHHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTG---GGTTTTTCCSSS
T ss_pred CcccCceeccChHHHHHHhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhH---HHHHHcCCCccc
Confidence 3578999999999999888777787777765444 889999999999999999999999998754 889999998777
Q ss_pred CcEEEEEeC-CCccccCC--CCCCHHHHHHHHHHHhcCce--eeecccCchh
Q 015527 341 PRVIAYSAR-DAKKYVLN--GELTLSSIKSFGEEFLEDKL--LNQSDQISET 387 (405)
Q Consensus 341 ~p~i~i~~~-~~~~y~~~--~~~~~~~l~~Fi~~~~~Gkl--~~kse~iPe~ 387 (405)
.|++++++. ++.+|.+. |.++.+.|.+|++++++|++ ++||||+|++
T Consensus 79 iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~ 130 (133)
T 2djk_A 79 FPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEK 130 (133)
T ss_dssp SSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTT
T ss_pred CCEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCc
Confidence 899999985 67778876 89999999999999999999 9999999997
No 98
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.77 E-value=1.4e-18 Score=136.16 Aligned_cols=105 Identities=18% Similarity=0.270 Sum_probs=92.8
Q ss_pred CCCcEEcCh-hhHHHHHcC--CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceE
Q 015527 55 AKDVVSLNG-KNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 55 ~~~~~~l~~-~~~~~~~~~--~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (405)
...+..++. ++|+..+.+ +++++|.|||+||++|+.+.|.++++++.+ ++.|+.||++++++++++|+|.++||+
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 96 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALPTF 96 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCCEE
Confidence 345778875 889888854 579999999999999999999999998887 599999999999999999999999999
Q ss_pred EEEe--CCe--eeeeecCCCCHHHHHHHHHhhhcC
Q 015527 132 YLFV--AGV--RQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 132 ~~~~--~g~--~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
++|+ +|+ .+.++.|. +.++|.++|.+.+..
T Consensus 97 ~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp EEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred EEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 9996 887 77889998 899999999988753
No 99
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=2.9e-18 Score=134.76 Aligned_cols=103 Identities=13% Similarity=0.167 Sum_probs=91.0
Q ss_pred cCCCcEEcChhhHHHHHcC---CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccce
Q 015527 54 YAKDVVSLNGKNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~---~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (405)
....+..++.++|.+.+.+ +++++|+|||+||++|+.+.|.|+++++++. ++.|+.||+++.. ++|+|.++||
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~Pt 83 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCLPT 83 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCCSE
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCCCE
Confidence 3456888999999988843 3689999999999999999999999999986 6999999999875 7899999999
Q ss_pred EEEEeCCeeeeeecCCC-------CHHHHHHHHHhhh
Q 015527 131 LYLFVAGVRQFQFFGER-------TRDVISAWVREKM 160 (405)
Q Consensus 131 ~~~~~~g~~~~~~~g~~-------~~~~l~~~i~~~~ 160 (405)
+++|++|+.+.++.|.. +.+.|.++|.+.-
T Consensus 84 ~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 84 IFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 99999998889999875 7889999988764
No 100
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=4.7e-18 Score=132.90 Aligned_cols=105 Identities=19% Similarity=0.327 Sum_probs=91.3
Q ss_pred EEcChhhHHHHH----cCCCcEEEEEecCCChhHhhhHHHH---HHHHHHccCCcEEEEEeCc--ccHhHHHhCCCcccc
Q 015527 59 VSLNGKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYP 129 (405)
Q Consensus 59 ~~l~~~~~~~~~----~~~~~~~v~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~i~~~P 129 (405)
+.++..+|++.+ .++++++|.||++||++|+.+.|.+ .++++.++.++.++.||++ .+..++++|+|.++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~P 88 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYP 88 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSC
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCC
Confidence 345667777665 4689999999999999999999999 7777776667999999998 578999999999999
Q ss_pred eEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhcCC
Q 015527 130 TLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (405)
Q Consensus 130 t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (405)
|+++++ +|+.+.++.|..+.+.+.++|++.+.+.
T Consensus 89 t~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 89 TLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp EEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 999995 9988899999999999999999988653
No 101
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.60 E-value=8.4e-20 Score=137.35 Aligned_cols=102 Identities=25% Similarity=0.480 Sum_probs=93.6
Q ss_pred cEEcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeC
Q 015527 58 VVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (405)
Q Consensus 58 ~~~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~ 136 (405)
+.++++++|.+.+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|++.++|+++++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKN 82 (106)
Confidence 5678888898655 678899999999999999999999999999998789999999999999999999999999999999
Q ss_pred CeeeeeecCCCCHHHHHHHHHhh
Q 015527 137 GVRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
|+...++.|..+.+.+.++|.+.
T Consensus 83 g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 83 GQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 98888999999999999998765
No 102
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.75 E-value=1.1e-17 Score=143.93 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=93.8
Q ss_pred cEEcChhhHHHHHcCCCcE-EEEEecCCChhHhhhHHHHHHHHHHcc----CCcEEEEEeCcccHhHHHhCCCcccceEE
Q 015527 58 VVSLNGKNFSEFMGKNRNV-MVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~-~v~f~a~~C~~C~~~~~~~~~~~~~~~----~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (405)
...+++++++.+...++++ +|.|||+||++|+.+.|.++++++.++ +++.++.||++++++++++|+|.++||++
T Consensus 118 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 197 (226)
T 1a8l_A 118 ETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIV 197 (226)
T ss_dssp CCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEE
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEE
Confidence 4567888888877666666 999999999999999999999999997 58999999999999999999999999999
Q ss_pred EEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++++|+...++.|..+.+.|.+||.+.+
T Consensus 198 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 198 IQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 9999988899999999999999998765
No 103
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.74 E-value=3e-17 Score=140.84 Aligned_cols=120 Identities=20% Similarity=0.244 Sum_probs=101.0
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEe--cCCChhHhhhHHHHHHHHHHcc---CCcEEEEEeCcc-----cHhHHHhC
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFY--ANWCYWSKKLAPEFAAAAKMLK---GEADLVMVDAYL-----EKDLAKEY 123 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~--a~~C~~C~~~~~~~~~~~~~~~---~~v~~~~v~~~~-----~~~~~~~~ 123 (405)
....++.+++++|++.+.++++++|.|| ||||+ +.|.|+++++.+. +++.|+.|||++ ++++|++|
T Consensus 14 ~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 14 TCTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp -CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 3457889999999998888899999999 99998 9999999999985 379999999999 89999999
Q ss_pred CCc--ccceEEEEeCCee--eeee--cCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhc
Q 015527 124 NIL--AYPTLYLFVAGVR--QFQF--FGERTRDVISAWVREKMTLGTYSITTTDEAERILT 178 (405)
Q Consensus 124 ~i~--~~Pt~~~~~~g~~--~~~~--~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~ 178 (405)
+|. ++||+++|. |+. +.+| .|.++.+.|.+||.+.++.....-...+.++.++.
T Consensus 90 ~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~~~~~g~i~~~d~l~~ 149 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCIKEFNEVLK 149 (248)
T ss_dssp TCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCCCCCTTCCHHHHHHHT
T ss_pred CCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccccCCCCchHHHHHHHH
Confidence 999 999999999 863 6788 89999999999999997643322233455555543
No 104
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.74 E-value=9.7e-18 Score=131.62 Aligned_cols=93 Identities=15% Similarity=0.276 Sum_probs=84.3
Q ss_pred HHHcCCCcEEEEEecCCChhHhhhHHHHH--HHHHHccCCcEEEEEeC---cccHhHHHhCCC---cccceEEEEe-CCe
Q 015527 68 EFMGKNRNVMVMFYANWCYWSKKLAPEFA--AAAKMLKGEADLVMVDA---YLEKDLAKEYNI---LAYPTLYLFV-AGV 138 (405)
Q Consensus 68 ~~~~~~~~~~v~f~a~~C~~C~~~~~~~~--~~~~~~~~~v~~~~v~~---~~~~~~~~~~~i---~~~Pt~~~~~-~g~ 138 (405)
....++++++|.||++||++|+.+.|.|. ++++.+++++.++.||+ +.+++++++|+| .++||+++++ +|+
T Consensus 24 ~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~ 103 (133)
T 3fk8_A 24 AGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGK 103 (133)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSC
T ss_pred HHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCC
Confidence 33456899999999999999999999999 99999877899999999 999999999999 9999999995 999
Q ss_pred eeeeecC-------CCCHHHHHHHHHhhh
Q 015527 139 RQFQFFG-------ERTRDVISAWVREKM 160 (405)
Q Consensus 139 ~~~~~~g-------~~~~~~l~~~i~~~~ 160 (405)
.+.++.| ..+.+.+.+|+++..
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 104 VRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 9999998 788999999998754
No 105
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.73 E-value=1.2e-17 Score=131.17 Aligned_cols=100 Identities=23% Similarity=0.390 Sum_probs=86.7
Q ss_pred cChhhHHHHHc--CCCcEEEEEecCCChhHhhhHHHH---HHHHHHccCCcEEEEEeC----cccHhHHHhCCCcccceE
Q 015527 61 LNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDA----YLEKDLAKEYNILAYPTL 131 (405)
Q Consensus 61 l~~~~~~~~~~--~~~~~~v~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~~----~~~~~~~~~~~i~~~Pt~ 131 (405)
.+.++++..+. .+++++|+||++||++|+.+.|.+ .++++.++ ++.++.||+ +.+.+++++|+|.++||+
T Consensus 17 ~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~ 95 (134)
T 2fwh_A 17 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKHLNVLGLPTI 95 (134)
T ss_dssp CSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTTCCSSSEE
T ss_pred cCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcCCCCCCEE
Confidence 35677777664 489999999999999999999999 99999987 499999999 667899999999999999
Q ss_pred EEEe-CCeee--eeecCCCCHHHHHHHHHhhhc
Q 015527 132 YLFV-AGVRQ--FQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 132 ~~~~-~g~~~--~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++++ +|+.+ .++.|..+.++|.+++.+..+
T Consensus 96 ~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 96 LFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp EEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred EEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 9994 89776 689999999999999987654
No 106
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.71 E-value=1.9e-17 Score=140.34 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=91.8
Q ss_pred CCCcEEc-ChhhHHHHHcC---CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccce
Q 015527 55 AKDVVSL-NGKNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (405)
Q Consensus 55 ~~~~~~l-~~~~~~~~~~~---~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (405)
...+..+ +.++|...+.. +++++|.||++||++|+.+.|.|.++++.+. ++.|+.||++ ++.++.+|+|.++||
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVLPT 175 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGCSE
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCCCE
Confidence 4567888 89999988843 3899999999999999999999999999996 7999999999 888999999999999
Q ss_pred EEEEeCCeeeeeecCCCCH-------HHHHHHHHhh
Q 015527 131 LYLFVAGVRQFQFFGERTR-------DVISAWVREK 159 (405)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~-------~~l~~~i~~~ 159 (405)
+++|++|+.+.++.|..+. +.|..||.+.
T Consensus 176 l~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 176 LLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 9999999888899987664 8888888765
No 107
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.71 E-value=4.9e-17 Score=119.51 Aligned_cols=98 Identities=19% Similarity=0.240 Sum_probs=85.0
Q ss_pred CcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHh----HHHhCCCcc-cce
Q 015527 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILA-YPT 130 (405)
Q Consensus 57 ~~~~l-~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~i~~-~Pt 130 (405)
....+ +.++|++++.++++++|.|+|+||++|+.+.|.|+++++. +++.|+.||.+++++ ++.++||++ .|+
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq 84 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQ 84 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSE
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCe
Confidence 34455 5678999998899999999999999999999999999985 479999999999977 799999995 999
Q ss_pred EEEEeCCeeeee-ecCCCCHHHHHHHH
Q 015527 131 LYLFVAGVRQFQ-FFGERTRDVISAWV 156 (405)
Q Consensus 131 ~~~~~~g~~~~~-~~g~~~~~~l~~~i 156 (405)
+++|++|+.+.+ -.|..+.+.|.+.+
T Consensus 85 ~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 85 AFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEEECCEEEEEeeccccCHHHHHHhh
Confidence 999999987766 56888998887654
No 108
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.71 E-value=5.3e-17 Score=139.18 Aligned_cols=105 Identities=16% Similarity=0.166 Sum_probs=91.2
Q ss_pred cCCCcEEc-ChhhHHHHHc---CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccc
Q 015527 54 YAKDVVSL-NGKNFSEFMG---KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (405)
Q Consensus 54 ~~~~~~~l-~~~~~~~~~~---~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (405)
....+..+ +.++|...+. .+++++|.|||+||++|+.+.|.|.++++.+. ++.|+.||++. +.++.+|+|.++|
T Consensus 110 ~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-~v~f~kVd~d~-~~l~~~~~I~~~P 187 (245)
T 1a0r_P 110 RYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-MVKFCKIKASN-TGAGDRFSSDVLP 187 (245)
T ss_dssp CCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-TSEEEEEEHHH-HCCTTSSCTTTCS
T ss_pred CCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CCEEEEEeCCc-HHHHHHCCCCCCC
Confidence 34567888 7999998884 37899999999999999999999999999997 59999999987 7799999999999
Q ss_pred eEEEEeCCeeeeeecCC-------CCHHHHHHHHHhhh
Q 015527 130 TLYLFVAGVRQFQFFGE-------RTRDVISAWVREKM 160 (405)
Q Consensus 130 t~~~~~~g~~~~~~~g~-------~~~~~l~~~i~~~~ 160 (405)
|+++|++|+.+.++.|. .+.+.|..||.+.-
T Consensus 188 Tll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 188 TLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 99999999888888775 34677888887763
No 109
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.70 E-value=2.3e-17 Score=118.56 Aligned_cols=83 Identities=17% Similarity=0.353 Sum_probs=76.9
Q ss_pred CcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHH
Q 015527 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (405)
Q Consensus 74 ~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (405)
.++++.||++||++|+++.|.++++++++++++.++.+|++++++++++|++.++||+++ +|+. ++.|..+.+++.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~ 78 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALV 78 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHH
Confidence 468999999999999999999999999998889999999999999999999999999998 8865 889999999999
Q ss_pred HHHHhhh
Q 015527 154 AWVREKM 160 (405)
Q Consensus 154 ~~i~~~~ 160 (405)
++|++.+
T Consensus 79 ~~l~~~l 85 (85)
T 1fo5_A 79 EAIKKRL 85 (85)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998753
No 110
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.70 E-value=1.1e-16 Score=137.06 Aligned_cols=101 Identities=23% Similarity=0.398 Sum_probs=92.6
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEec--CCChhHhhhHHHHHHHHHHccC--CcEEEEEe-----CcccHhHHHhCCCc
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYA--NWCYWSKKLAPEFAAAAKMLKG--EADLVMVD-----AYLEKDLAKEYNIL 126 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a--~~C~~C~~~~~~~~~~~~~~~~--~v~~~~v~-----~~~~~~~~~~~~i~ 126 (405)
..++.+++++|+..+.++++++|.||| |||+ +.|.|+++++.+.+ ++.|+.|| |+.++++|++|+|.
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 468899999999988888999999999 9999 99999999999964 79999999 55589999999999
Q ss_pred --ccceEEEEeCCe--eeeeecCCCCHHHHHHHHHhhh
Q 015527 127 --AYPTLYLFVAGV--RQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 127 --~~Pt~~~~~~g~--~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++||+++|.+|+ .+.+|.|.++.+.|.+||.+..
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 999999999996 4789999999999999999885
No 111
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.70 E-value=6.5e-17 Score=124.91 Aligned_cols=101 Identities=14% Similarity=0.237 Sum_probs=87.8
Q ss_pred CcEEcChhhHHHHHcC--CCcEEEEEecC-------CChhHhhhHHHHHHHHHHccCCcEEEEEeC-------cccHhHH
Q 015527 57 DVVSLNGKNFSEFMGK--NRNVMVMFYAN-------WCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------YLEKDLA 120 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~--~~~~~v~f~a~-------~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~-------~~~~~~~ 120 (405)
.+...+.++|++.+.+ +++++|.|||+ ||++|+.+.|.+.++++.+++++.|+.||+ +.++.++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 3556788999988865 89999999999 999999999999999999987899999999 7888999
Q ss_pred HhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHh
Q 015527 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (405)
Q Consensus 121 ~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (405)
++|+|.++||+++|++|.....+.| .+.+.|.++|.+
T Consensus 86 ~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 86 KNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 9999999999999998755555555 467888888864
No 112
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.70 E-value=2.6e-17 Score=118.28 Aligned_cols=82 Identities=21% Similarity=0.390 Sum_probs=76.3
Q ss_pred cEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHH
Q 015527 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (405)
Q Consensus 75 ~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (405)
+.++.||++||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++||+++ +|+. ++.|..+.+.+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~ 78 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFE 78 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHH
Confidence 46899999999999999999999999998889999999999999999999999999998 8865 8899999999999
Q ss_pred HHHhhh
Q 015527 155 WVREKM 160 (405)
Q Consensus 155 ~i~~~~ 160 (405)
+|.+.+
T Consensus 79 ~l~~~l 84 (85)
T 1nho_A 79 AINDEM 84 (85)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998765
No 113
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.70 E-value=3.2e-18 Score=133.81 Aligned_cols=105 Identities=27% Similarity=0.400 Sum_probs=93.7
Q ss_pred CCcEEc-ChhhHHHHHc----CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccce
Q 015527 56 KDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (405)
Q Consensus 56 ~~~~~l-~~~~~~~~~~----~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (405)
..+..+ +.++|++.+. ++++++|.||++||++|+.+.|.+.++++.++ ++.|+.||++++++++++|+|.++||
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt 92 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNVEAMPT 92 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTCCSSCC
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCCCccce
Confidence 456677 4688987774 48899999999999999999999999999987 69999999999999999999999999
Q ss_pred EEEEeCCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
++++++|+.+.++.| .+.+.+.++|.+.+..
T Consensus 93 ~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 93 FLFIKDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp CCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred EEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 999999988888888 5888999999988754
No 114
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.69 E-value=1.1e-16 Score=125.21 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=96.1
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcc--cceEEEE
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILA--YPTLYLF 134 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~--~Pt~~~~ 134 (405)
-+.++|.++|++.+.++.+++|.|||+ |++|+.+.|.++++|+++++++.|+.||.++++++++.|||++ +||++++
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~ 85 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQ 85 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEE
T ss_pred ceeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEE
Confidence 367899999998888888999999999 8999999999999999999899999999999999999999999 9999999
Q ss_pred eC--Ceeeeeec--CCCCHHHHHHHHHhhhcCCc
Q 015527 135 VA--GVRQFQFF--GERTRDVISAWVREKMTLGT 164 (405)
Q Consensus 135 ~~--g~~~~~~~--g~~~~~~l~~~i~~~~~~~~ 164 (405)
++ |+. .+.. |..+.+.|.+|+++.+...+
T Consensus 86 ~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 86 EVAKNQK-FPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp CTTTCCB-CCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred ecCcCcc-cCCCCccccCHHHHHHHHHHHHcCCc
Confidence 86 644 5665 99999999999999886544
No 115
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.69 E-value=3.5e-17 Score=134.47 Aligned_cols=101 Identities=13% Similarity=0.146 Sum_probs=83.5
Q ss_pred EcChhhHHHHH----cCCCcEEEEEecCCChhHhhhHHHH---HHHHHHccCCcEEEEEeCcccHhH-------------
Q 015527 60 SLNGKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLEKDL------------- 119 (405)
Q Consensus 60 ~l~~~~~~~~~----~~~~~~~v~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~~~~~~~~------------- 119 (405)
..+..+|++.+ .++++++|+|||+||++|+.+.+.+ .++.+.+++++.++.||++++.++
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 109 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTER 109 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhh
Confidence 34455566554 6789999999999999999975544 566666655799999999887655
Q ss_pred -------------HHhCCCcccceEEEEe-CCeeeeeecCCCC-HHHHHHHHHhhh
Q 015527 120 -------------AKEYNILAYPTLYLFV-AGVRQFQFFGERT-RDVISAWVREKM 160 (405)
Q Consensus 120 -------------~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~-~~~l~~~i~~~~ 160 (405)
++.|+|.++||+++++ +|+++.++.|..+ .+++.++|.+.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 110 TLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 7899999999999996 9988899999998 999999998876
No 116
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.68 E-value=1.2e-16 Score=125.80 Aligned_cols=102 Identities=17% Similarity=0.305 Sum_probs=87.0
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcc---------------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--------------------- 115 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~--------------------- 115 (405)
.+.+++++.++.....+++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++.
T Consensus 8 ~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 86 (136)
T 1lu4_A 8 TATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLND 86 (136)
T ss_dssp EEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEEC
T ss_pred EeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEEC
Confidence 34445555554333467999999999999999999999999999998 89999999977
Q ss_pred -cHhHHHhCCCcccceEEEEe-CCeeeeeec---CCCCHHHHHHHHHhhh
Q 015527 116 -EKDLAKEYNILAYPTLYLFV-AGVRQFQFF---GERTRDVISAWVREKM 160 (405)
Q Consensus 116 -~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~---g~~~~~~l~~~i~~~~ 160 (405)
+..+++.|++.++|++++++ +|++. ++. |..+.+++.++|++.+
T Consensus 87 ~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 87 ADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 67899999999999999996 89877 999 9999999999998764
No 117
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.68 E-value=6.2e-15 Score=142.18 Aligned_cols=297 Identities=15% Similarity=0.182 Sum_probs=216.5
Q ss_pred CcEEcChhhHHHHHcCCC--cEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 57 DVVSLNGKNFSEFMGKNR--NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~--~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
.+..++. ++.++..++ .++|.|+.+... ...+.|.++|..+.+++.|+.++ ++++++++. +++|
T Consensus 124 ~v~~i~~--~~~~~~~~~~~~~~v~~f~~~~~---~~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~~----i~l~ 189 (504)
T 2b5e_A 124 AVAVVAD--LPAYLANETFVTPVIVQSGKIDA---DFNATFYSMANKHFNDYDFVSAE-----NADDDFKLS----IYLP 189 (504)
T ss_dssp SEEECSC--HHHHHHHSCCSSCEEEEEESCCH---HHHHHHHHHHHHTTTTCEEEEEE-----CTTSCCEEE----EEET
T ss_pred cceeHHH--HHHHHhcCCCceEEEEEeCCCCc---hHHHHHHHHHHHhhcCcEEEEEH-----HHHHhcCCe----EEec
Confidence 4556655 666665555 667777776554 35678999999998899999887 467777765 6677
Q ss_pred eCCeeeeeecCC-C---CHHHHHHHHHhhhcCCccccCChhHHHHHhccCCeEEEEEEcCCCC--ccHHHHHHHh-ccCC
Q 015527 135 VAGVRQFQFFGE-R---TRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEG--MESEELAAAS-KLHS 207 (405)
Q Consensus 135 ~~g~~~~~~~g~-~---~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~--~~~~~~~~~a-~~~~ 207 (405)
+.......|.|. . +.+.|.+||....-|.+..+ +.+.+..+.......++.++...+. .....+..+| ++.+
T Consensus 190 ~~~~~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~-t~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~ 268 (504)
T 2b5e_A 190 SAMDEPVVYNGKKADIADADVFEKWLQVEALPYFGEI-DGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRG 268 (504)
T ss_dssp TEEEEEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBC-CHHHHHHHHHTTSCEEEEEESSHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCcccccCCcccccCCHHHHHHHHHhcccCCcccC-CHhHHHHHhcCCCcEEEEEecCcccHHHHHHHHHHHHHhcCC
Confidence 642256678898 6 99999999999988888887 5677888887777777767654222 2445566777 6778
Q ss_pred cceEEEecCHH---HHhhcCCCCCCCCCeEEEeecCCCcccccc--CC-----------CCHHHHHHHHhccC-------
Q 015527 208 DVNFYQTTSAD---VAEFFHIHPKSKRPALIFLHLEAGKATPFR--HQ-----------FTRLAIANFVTHTK------- 264 (405)
Q Consensus 208 ~~~f~~~~~~~---l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~--g~-----------~~~~~l~~fi~~~~------- 264 (405)
++.|+.+.... +++.|++ . ...|.+++++..+...+.+. +. ++.+.+..|+....
T Consensus 269 ~i~F~~id~~~~~~~~~~~gl-~-~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~ 346 (504)
T 2b5e_A 269 LMNFVSIDARKFGRHAGNLNM-K-EQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPI 346 (504)
T ss_dssp TCEEEEEEHHHHTTHHHHTTC-C-SCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCC
T ss_pred eeEEEEEehhhhHHHHHHcCC-c-ccCCEEEEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChh
Confidence 89999875443 6788898 2 36899999987444444444 44 78899999987521
Q ss_pred -----C-----CCcccccccccccccc-CCccE-EEEEecCCC-cHHHHHHHHHHHHHhc-C--cEEEEEEEcCCcchhh
Q 015527 265 -----H-----PLVVTLTIHNAQFVFQ-DPRKQ-LWLFAPAYG-SDKVILTFEEVAKALK-G--KLLHVYVEMNSEGVGR 328 (405)
Q Consensus 265 -----~-----p~v~~l~~~~~~~~~~-~~~~~-~i~f~~~~~-~~~~~~~~~~va~~~~-~--~~~f~~id~~~~~~~~ 328 (405)
. ..+..++..++..... .+.++ +.+|++||. |+...+.|.++|+++. + ++.++.+|++...
T Consensus 347 ~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~--- 423 (504)
T 2b5e_A 347 VKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND--- 423 (504)
T ss_dssp CCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC---
T ss_pred hhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc---
Confidence 1 2356677888877643 34454 557778988 9999999999999987 3 6999999998643
Q ss_pred hhhhhcCCCCCCCcEEEEEeCCCc--cccCCCCCCHHHHHHHHHHHhcCce
Q 015527 329 RVSQEFGVSGNAPRVIAYSARDAK--KYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 329 ~~~~~~gi~~~~~p~i~i~~~~~~--~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
... +++.. .|.++++..+.. ...+.|..+.+.|.+||++.....+
T Consensus 424 -~~~-~~v~~--~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 424 -VRG-VVIEG--YPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp -CSS-CCCSS--SSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred -ccc-CCcee--cCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCCC
Confidence 334 88864 788888854333 5678898999999999999876655
No 118
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.68 E-value=4.6e-16 Score=124.29 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=91.7
Q ss_pred EEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC-------------------------
Q 015527 59 VSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA------------------------- 113 (405)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~------------------------- 113 (405)
.+++++.++....++++++|.||++||++|+.+.|.+.++++++++++.++.|++
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPI 94 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCE
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcce
Confidence 5778887876666789999999999999999999999999999987799999995
Q ss_pred --cccHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 114 --YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 114 --~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+.+..+++.|+|.++|++++++ +|+++.++.|..+.+.+.++|++.+.
T Consensus 95 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 95 FVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp EECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred EECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 4456899999999999999996 99888999999999999999998874
No 119
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.67 E-value=2.4e-16 Score=123.94 Aligned_cols=104 Identities=17% Similarity=0.250 Sum_probs=88.1
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcc--------------------
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-------------------- 115 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~-------------------- 115 (405)
..+.+++++.++.....+++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++.
T Consensus 8 ~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 86 (136)
T 1zzo_A 8 FSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQL 86 (136)
T ss_dssp CEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEE
T ss_pred cccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEE
Confidence 344555555555444468899999999999999999999999999998 89999999854
Q ss_pred ---cHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 116 ---EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 116 ---~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+..+++.|++.++|++++++ +|++. ++.|..+.+.+.++|.+.+.
T Consensus 87 ~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 87 ADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp ECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred EcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 56789999999999999997 89777 99999999999999988763
No 120
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.67 E-value=1e-16 Score=119.73 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=73.4
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccC--CcEEEEEeCccc--HhHHHhCCCcccceEEEEeCCeeeeeecCCC
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLE--KDLAKEYNILAYPTLYLFVAGVRQFQFFGER 147 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~v~~~~~--~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~ 147 (405)
+...++|+|||+||++|+.+.+.+....+.... .+.+..||++.+ .+++.+++|.++||+++|++|+++.+..|..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 457899999999999999998754433222100 377888888876 5789999999999999999999999999999
Q ss_pred CHHHHHHHHHhhhc
Q 015527 148 TRDVISAWVREKMT 161 (405)
Q Consensus 148 ~~~~l~~~i~~~~~ 161 (405)
..+.+..||.+.+.
T Consensus 97 ~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 97 GEDFFWPMLARLIG 110 (116)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999988763
No 121
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.67 E-value=1.1e-14 Score=124.90 Aligned_cols=197 Identities=13% Similarity=0.182 Sum_probs=153.0
Q ss_pred CCcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 56 KDVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 56 ~~~~~l-~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
..++.+ +.+++++.+.++++++|.|+++| |....+.|.++|+.+. ++.|+... ++++|++|++.+ |++.+|
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~-~~~F~~t~---~~~v~~~~~v~~-p~i~lf 80 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKFP-GVSFGIST---DSEVLTHYNITG-NTICLF 80 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTCT-TSEEEEEC---CHHHHHHTTCCS-SEEEEE
T ss_pred CCCeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhCC-CceEEEEC---CHHHHHHcCCCC-CeEEEE
Confidence 345566 56899999999999999999998 4678999999999994 89998754 788999999998 999999
Q ss_pred eCC-eeeeeecC----CCCHHHHHHHHHhhhcCCccccCChhHHHHHhccCCeEEEE-EEcCCCCc---cHHHHHHHh-c
Q 015527 135 VAG-VRQFQFFG----ERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLG-FLHDLEGM---ESEELAAAS-K 204 (405)
Q Consensus 135 ~~g-~~~~~~~g----~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~~~~v~-f~~~~~~~---~~~~~~~~a-~ 204 (405)
+++ .....|.| .++.+.|.+||.....|.+.++ +.+.+..+.+...+.+++ |...++.. ..+.|..+| +
T Consensus 81 k~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~-t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~ 159 (227)
T 4f9z_D 81 RLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEY-NPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKL 159 (227)
T ss_dssp ETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEEC-CHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHH
T ss_pred EecCcccccccccccCCCCHHHHHHHHHHhCCCceeec-CcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHH
Confidence 954 34567774 7999999999999998888888 566777777665445544 44555543 456778888 6
Q ss_pred cCCcceEEEecC-----HHHHhhcCCCCCCCCCeEEEeecCCCcccccc-CCCCHHHHHHHHhc
Q 015527 205 LHSDVNFYQTTS-----ADVAEFFHIHPKSKRPALIFLHLEAGKATPFR-HQFTRLAIANFVTH 262 (405)
Q Consensus 205 ~~~~~~f~~~~~-----~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~-g~~~~~~l~~fi~~ 262 (405)
+++++.|+.+.. ..+.+.||++. ..+|++++++..+...+.+. +.++.+.|.+|+..
T Consensus 160 ~k~~i~F~~vd~~~~~~~~~l~~fgl~~-~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 160 FQGKILFILVDSGMKENGKVISFFKLKE-SQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDG 222 (227)
T ss_dssp TTTTCEEEEEETTSGGGHHHHHHTTCCG-GGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHH
T ss_pred hhCCEEEEEeCCccHhHHHHHHHcCCCc-ccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHH
Confidence 788899987744 24778999972 14899999986554444444 67999999999975
No 122
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.67 E-value=3.2e-16 Score=126.01 Aligned_cols=97 Identities=15% Similarity=0.367 Sum_probs=82.6
Q ss_pred hhHHHHHcCCCcEEEEEe-cCCChhHhhhHHHH---HHHHHHccCCcEEEEEeCccc-----------HhHHHhCCCccc
Q 015527 64 KNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLE-----------KDLAKEYNILAY 128 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~-a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~~~~~-----------~~~~~~~~i~~~ 128 (405)
+.+.....++++++|+|| |+||++|+.+.|.+ .++.+.++.++.++.||+++. ..+++.|+|.++
T Consensus 38 ~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~ 117 (154)
T 2ju5_A 38 EALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGF 117 (154)
T ss_dssp HHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCC
Confidence 334434456899999999 99999999999999 777766655799999999775 489999999999
Q ss_pred ceEEEEe-CCeeeeeecCCC--CHHHHHHHHHhhhc
Q 015527 129 PTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (405)
Q Consensus 129 Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (405)
||+++++ +|+++.++ |.. +.+.+.++|.+.+.
T Consensus 118 Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 118 PELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp SEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 9999995 99888889 988 89999999988764
No 123
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.66 E-value=1.9e-17 Score=153.75 Aligned_cols=99 Identities=27% Similarity=0.393 Sum_probs=84.6
Q ss_pred cCCCcEEcChhhHHHHHcCC--CcEEEEEecCCChhHhhhHHHHHHHHHHccC--------CcEEEEEeCcccHhHHHhC
Q 015527 54 YAKDVVSLNGKNFSEFMGKN--RNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--------EADLVMVDAYLEKDLAKEY 123 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~--~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~--------~v~~~~v~~~~~~~~~~~~ 123 (405)
....++.++.++|+..+.++ ++++|+|||+||++|+.+.|.|+++++.+++ ++.|+.|||+++++++++|
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y 100 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKY 100 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHT
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHc
Confidence 34678999999999888543 7899999999999999999999999999972 4999999999999999999
Q ss_pred CCcccceEEEEeCC--eeeeeecCCCCHHHH
Q 015527 124 NILAYPTLYLFVAG--VRQFQFFGERTRDVI 152 (405)
Q Consensus 124 ~i~~~Pt~~~~~~g--~~~~~~~g~~~~~~l 152 (405)
+|.++||+++|++| ....+|.|.++.+.|
T Consensus 101 ~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L 131 (470)
T 3qcp_A 101 DINFVPRLFFFYPRDSCRSNEECGTSSLEHV 131 (470)
T ss_dssp TCCSSCEEEEEEESSCCCTTSCCCCCCEEEE
T ss_pred CCCccCeEEEEECCCceEEEEeeCCCCHHHH
Confidence 99999999999743 346678886554433
No 124
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.46 E-value=9.3e-18 Score=131.19 Aligned_cols=99 Identities=20% Similarity=0.331 Sum_probs=86.4
Q ss_pred hhhHHHHHcCCCcEEEEEecCCChhHhhhHHHH---HHHHHHccCCcEEEEEeCc--ccHhHHHhCCCcccceEEEE--e
Q 015527 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYPTLYLF--V 135 (405)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~i~~~Pt~~~~--~ 135 (405)
.+.++....++++++|+||++||++|+.+.|.+ .++++.+++++.++.||++ ++..++++|+|.++||+++| +
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 344555556789999999999999999999999 9999888878999999994 66889999999999999999 4
Q ss_pred CCee--eeeecCCCCHHHHHHHHHhhhc
Q 015527 136 AGVR--QFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 136 ~g~~--~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+|+. +.++.|..+.+.+.++|++.++
T Consensus 89 ~G~~~~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 89 AGAWEEVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 6877 7889999999999999988874
No 125
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.65 E-value=6.6e-16 Score=133.08 Aligned_cols=101 Identities=14% Similarity=0.189 Sum_probs=90.5
Q ss_pred CcEEcChhhHHHHHcCCCcE-EEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 57 DVVSLNGKNFSEFMGKNRNV-MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~-~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
.+..+++++|+.....++++ +|.||++||++|+.+.|.++++++.++ ++.++.||++++++++++|+|.++||+++
T Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~-- 195 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND-YITSKVIDASENQDLAEQFQVVGVPKIVI-- 195 (229)
T ss_dssp TCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--
T ss_pred CccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC-CeEEEEEECCCCHHHHHHcCCcccCEEEE--
Confidence 45678889999887666665 889999999999999999999999984 79999999999999999999999999998
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+|+ +.++.|..+.+.|.+||.+.+.
T Consensus 196 ~G~-~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 196 NKG-VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp GGG-TEEEESCCCHHHHHHHHHHHHH
T ss_pred CCE-EEEeeCCCCHHHHHHHHHHHhh
Confidence 886 6779999999999999988774
No 126
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.65 E-value=9.2e-16 Score=125.00 Aligned_cols=106 Identities=22% Similarity=0.325 Sum_probs=91.6
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcccHhHHHhC-----------
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEY----------- 123 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~----------- 123 (405)
..+.+++++.++.....+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+++.+++|
T Consensus 17 ~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3or5_A 17 FSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVM 96 (165)
T ss_dssp CEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEE
T ss_pred ceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceE
Confidence 4455566665554444789999999999999999999999999999987 5999999999887777766
Q ss_pred ----------------CCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 124 ----------------NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 124 ----------------~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++.++|++++++ +|+++.++.|..+.+.+.++|.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 97 MATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp ECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred ecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 899999999996 99888999999999999999999885
No 127
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.64 E-value=1.6e-16 Score=118.55 Aligned_cols=77 Identities=21% Similarity=0.290 Sum_probs=65.8
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc------ccHhHHHhCCCcccceEEEEeCCeeeeeecC
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------LEKDLAKEYNILAYPTLYLFVAGVRQFQFFG 145 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~------~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g 145 (405)
.+++++|.|||+||++|+.+.|.|+++++.++ .|||+ ++++++++|+|.++||+++ +|+ .+.|
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~---~~~G 79 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYTG 79 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE---EEES
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE---EecC
Confidence 35678999999999999999999999987764 45565 6788999999999999777 885 3899
Q ss_pred CCCHHHHHHHHHhh
Q 015527 146 ERTRDVISAWVREK 159 (405)
Q Consensus 146 ~~~~~~l~~~i~~~ 159 (405)
.++.+.|.+|+...
T Consensus 80 ~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 80 VRSLEALAVASGYP 93 (106)
T ss_dssp CCCHHHHHHHHTCC
T ss_pred CCCHHHHHHHhCCc
Confidence 99999999998544
No 128
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.64 E-value=1.1e-15 Score=122.66 Aligned_cols=91 Identities=19% Similarity=0.220 Sum_probs=81.9
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc------------------------cHhHHHhCC--
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------------EKDLAKEYN-- 124 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~------------------------~~~~~~~~~-- 124 (405)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++. ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 689999999999999999999999999999965 79999999863 345778899
Q ss_pred CcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 125 ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 125 i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
+.++|++++++ +|+++.++.|..+.+++.++|++....
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999997 898999999999999999999988754
No 129
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.63 E-value=2.3e-15 Score=121.95 Aligned_cols=106 Identities=16% Similarity=0.241 Sum_probs=88.1
Q ss_pred CcEE-cChhhHHHHHcCCCcEEEEEecCCChhHhhh-HHHHHHHHHHccC-CcEEEEEeC--------------------
Q 015527 57 DVVS-LNGKNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EADLVMVDA-------------------- 113 (405)
Q Consensus 57 ~~~~-l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~-~~~~~~~~~~~~~-~v~~~~v~~-------------------- 113 (405)
.+.. ++++.+...-..+++++|.||++||++|+.+ +|.+.++++++++ ++.++.|++
T Consensus 13 ~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~ 92 (160)
T 3lor_A 13 DVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEF 92 (160)
T ss_dssp CEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHT
T ss_pred ccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHc
Confidence 3444 4555554333468999999999999999995 9999999999987 599999986
Q ss_pred --------cccHh------HHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 114 --------YLEKD------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 114 --------~~~~~------~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
+.... +++.|+|.++|++++++ +|+++.++.|..+.+.+.++|.+.+..
T Consensus 93 ~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 93 GIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp TCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred CCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 23334 89999999999999997 999999999999999999999988753
No 130
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.63 E-value=1e-15 Score=124.62 Aligned_cols=105 Identities=21% Similarity=0.270 Sum_probs=89.5
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeC----------------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDA---------------------- 113 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~---------------------- 113 (405)
.+.+++++.++.....+++++|.||++||++|+.++|.+.+++++++. ++.++.|++
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 567788887776666789999999999999999999999999998754 566666553
Q ss_pred ------cccHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 114 ------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 114 ------~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+.+..+++.|+|.++|++++++ +|+++.++.|..+.+.+.++|++.+.
T Consensus 102 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 102 KLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3456789999999999999996 99889999999999999999998874
No 131
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.63 E-value=1.1e-15 Score=122.56 Aligned_cols=92 Identities=23% Similarity=0.366 Sum_probs=82.9
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------cHhHHHhCCCccc
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------EKDLAKEYNILAY 128 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------~~~~~~~~~i~~~ 128 (405)
.+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++.|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 678999999999999999999999999999987 69999999876 3478999999999
Q ss_pred ceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhcCC
Q 015527 129 PTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (405)
Q Consensus 129 Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (405)
|++++++ +|+++.++.|..+.+.+.++|.+.+...
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 9999996 9988999999999999999999887543
No 132
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.63 E-value=2.2e-15 Score=121.88 Aligned_cols=92 Identities=12% Similarity=0.156 Sum_probs=81.4
Q ss_pred cCCCcEEEEEecCCChhHhhh-HHHHHHHHHHccC-CcEEEEEeCc----------------------------ccH---
Q 015527 71 GKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EADLVMVDAY----------------------------LEK--- 117 (405)
Q Consensus 71 ~~~~~~~v~f~a~~C~~C~~~-~~~~~~~~~~~~~-~v~~~~v~~~----------------------------~~~--- 117 (405)
..+++++|.||++||++|+.+ +|.+.++++++++ ++.++.|+++ ...
T Consensus 26 ~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 26 LRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp GTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred hCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 358999999999999999996 9999999999985 7999999863 222
Q ss_pred --hHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 118 --DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 118 --~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
.+++.|++.++|++++++ +|+++.++.|..+.+.+.+.|++.+..
T Consensus 106 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 106 MPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 589999999999999997 999999999999999999999988753
No 133
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.62 E-value=1.6e-16 Score=129.04 Aligned_cols=98 Identities=18% Similarity=0.305 Sum_probs=83.6
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHh-HHHhCCC--cccceEEEEe-CCee
Q 015527 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD-LAKEYNI--LAYPTLYLFV-AGVR 139 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~-~~~~~~i--~~~Pt~~~~~-~g~~ 139 (405)
+.++....++++++|+|||+||++|+.+.|.|.++++.+..++.|+.||++.++. ++..|++ .++||+++|+ +|+.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 5677677788999999999999999999999999877665567888899888877 8888988 6699999995 9988
Q ss_pred eeeecCC----------CCHHHHHHHHHhhhc
Q 015527 140 QFQFFGE----------RTRDVISAWVREKMT 161 (405)
Q Consensus 140 ~~~~~g~----------~~~~~l~~~i~~~~~ 161 (405)
+.++.|. .+.+.+.++|++.+.
T Consensus 117 ~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 117 HPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp CTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 8888884 789999999988763
No 134
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.62 E-value=4e-15 Score=128.81 Aligned_cols=100 Identities=16% Similarity=0.155 Sum_probs=85.3
Q ss_pred cChhhHHHHHc-CCCcEEEEEecCCChhHhhhHHHHHHHHHHcc----CCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 61 LNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 61 l~~~~~~~~~~-~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~----~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
++.+.++.+.. .++++++.|||+||++|+.+.|.|++++..++ .++.+..||++.+++++++|+|.++||+++
T Consensus 125 l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i-- 202 (243)
T 2hls_A 125 LEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI-- 202 (243)
T ss_dssp CCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--
T ss_pred CCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--
Confidence 45555554432 46678999999999999999999999999983 479999999999999999999999999988
Q ss_pred CCeeeeeecCCCCHHHHHHHHHhhhcCCc
Q 015527 136 AGVRQFQFFGERTRDVISAWVREKMTLGT 164 (405)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (405)
+|+. .|.|.++.++|.++|.+.++...
T Consensus 203 ~G~~--~~~G~~~~~~l~~~l~~~~~~~~ 229 (243)
T 2hls_A 203 NGYL--VFVGVPYEEDFLDYVKSAAEGRL 229 (243)
T ss_dssp TTEE--EEESCCCHHHHHHHHHHHHTTCC
T ss_pred CCEE--EEeCCCCHHHHHHHHHHHhhccc
Confidence 8864 39999999999999999986543
No 135
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.61 E-value=9e-16 Score=122.11 Aligned_cols=86 Identities=27% Similarity=0.497 Sum_probs=78.7
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHcc-CCcEEEEEeCcc-------------------------cHhHHHhCCC
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-GEADLVMVDAYL-------------------------EKDLAKEYNI 125 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~-~~v~~~~v~~~~-------------------------~~~~~~~~~i 125 (405)
.+++++|.||++||++|+.+.|.+.+++++++ .++.++.|+++. +..+++.|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 67899999999999999999999999999998 479999999864 5689999999
Q ss_pred cccceEEEEe-CCeeeeeecCCCCHHHHHHHHH
Q 015527 126 LAYPTLYLFV-AGVRQFQFFGERTRDVISAWVR 157 (405)
Q Consensus 126 ~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 157 (405)
.++|++++++ +|++..++.|..+.+.+.++|+
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 9999999996 9988899999999999998873
No 136
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.60 E-value=2.1e-15 Score=121.13 Aligned_cols=106 Identities=18% Similarity=0.232 Sum_probs=89.9
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcccH------------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK------------------ 117 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~~------------------ 117 (405)
.+.+++++.++..-..+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+.
T Consensus 14 ~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 93 (152)
T 2lja_A 14 SYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLH 93 (152)
T ss_dssp EEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEE
T ss_pred EeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceee
Confidence 444555544432223678999999999999999999999999999987 6999999998765
Q ss_pred -----hHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 118 -----DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 118 -----~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
.+++.|++.++|++++++ +|+++.++.|..+.+.+.++|++....
T Consensus 94 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 94 MGTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp CSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred cCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 789999999999999998 998889999999999999999988754
No 137
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.60 E-value=2.8e-15 Score=117.92 Aligned_cols=89 Identities=22% Similarity=0.291 Sum_probs=79.1
Q ss_pred cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC----------------------------cccHhHHHh
Q 015527 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA----------------------------YLEKDLAKE 122 (405)
Q Consensus 71 ~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~----------------------------~~~~~~~~~ 122 (405)
..+++++|.||++||++|+.+.|.+.++++++++++.++.|++ +.+..+++.
T Consensus 20 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 20 YKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp GTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 3689999999999999999999999999999877899998853 335578999
Q ss_pred CCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhh
Q 015527 123 YNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 123 ~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
|++.++|++++++ +|++..++.|..+.+++.++|++.
T Consensus 100 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 100 YGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred cCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 9999999999996 998899999999999999998763
No 138
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.59 E-value=3.7e-15 Score=119.93 Aligned_cols=104 Identities=14% Similarity=0.232 Sum_probs=87.3
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC-----------------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA----------------------- 113 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~----------------------- 113 (405)
.+.+++++.++..-.. ++++|.||++||++|+.+.|.+.++++++ ++.++.|++
T Consensus 15 ~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 91 (154)
T 3ia1_A 15 LLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLL 91 (154)
T ss_dssp CEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECB
T ss_pred EEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccc
Confidence 3444444444322234 89999999999999999999999999999 688999998
Q ss_pred ----cccHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhcCC
Q 015527 114 ----YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (405)
Q Consensus 114 ----~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (405)
+....+++.|++.++|++++++ +|+++.++.|..+.+++.++|++.....
T Consensus 92 ~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 92 ASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp CCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred cccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 3667889999999999999996 9999999999999999999999988543
No 139
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.59 E-value=4.5e-14 Score=129.49 Aligned_cols=206 Identities=14% Similarity=0.171 Sum_probs=158.1
Q ss_pred ccccCChhHHHHHhccCCeEEEEEEcCCCCc--cHHH-------HHHHh-ccCC-cceEEEe---cCHHHHhhcCCCCCC
Q 015527 164 TYSITTTDEAERILTVESKLVLGFLHDLEGM--ESEE-------LAAAS-KLHS-DVNFYQT---TSADVAEFFHIHPKS 229 (405)
Q Consensus 164 ~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~--~~~~-------~~~~a-~~~~-~~~f~~~---~~~~l~~~~~~~~~~ 229 (405)
+..+ +.+.++..+.+++.++|.|+++||+. ..+. +.++| .+.+ ++.|+.+ .+.+++++++++.
T Consensus 13 v~~l-~~~~f~~~i~~~~~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~-- 89 (350)
T 1sji_A 13 VVSL-TEKNFKQVLKKYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDE-- 89 (350)
T ss_dssp CEEE-CHHHHHHHHTTCSEEEEEEECCSCSSSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCS--
T ss_pred cEEC-CHHHHHHHHhhCCeEEEEEECCCCcchhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCc--
Confidence 4455 56788889888899999999999972 2333 67777 4444 5888876 4678999999994
Q ss_pred CCCeEEEeecCCCccccccCCCCHHHHHHHHhccCCCCccccc-ccccccccc-CCccEEEEEecCCCcHHHHHHHHHHH
Q 015527 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLT-IHNAQFVFQ-DPRKQLWLFAPAYGSDKVILTFEEVA 307 (405)
Q Consensus 230 ~~p~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~p~v~~l~-~~~~~~~~~-~~~~~~i~f~~~~~~~~~~~~~~~va 307 (405)
+|++++|+.+ ....|.|.++.+.|.+|+.+...|.+.+++ .+++..+.. ...+.++.|.... +......|.++|
T Consensus 90 -~Pt~~~~~~g--~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~-~~~~~~~~~~~A 165 (350)
T 1sji_A 90 -EGSLYVLKGD--RTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSE-ESEYYKAFEEAA 165 (350)
T ss_dssp -TTEEEEEETT--EEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCT-TSHHHHHHHHHH
T ss_pred -cceEEEEECC--cEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCC-CcHHHHHHHHHH
Confidence 9999999865 367899999999999999999999998885 567777665 4445555555442 245567899999
Q ss_pred HHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeC-CCccccCCCC-CCHHHHHHHHHHHhcCce-eeecccC
Q 015527 308 KALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLNGE-LTLSSIKSFGEEFLEDKL-LNQSDQI 384 (405)
Q Consensus 308 ~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~-~~~~y~~~~~-~~~~~l~~Fi~~~~~Gkl-~~kse~i 384 (405)
..+++++.|+.++.. .+++.+|++ .|.+++++. ......|+|. .+.++|.+||++...+.+ .+.++..
T Consensus 166 ~~~~~~~~f~~~~~~------~~~~~~~v~---~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~ 236 (350)
T 1sji_A 166 EHFQPYIKFFATFDK------GVAKKLSLK---MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDM 236 (350)
T ss_dssp HHTTTTSEEEEECCH------HHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTH
T ss_pred HhhccCcEEEEECCH------HHHHHcCCC---CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhH
Confidence 999999999998432 688999997 578888876 4455567886 899999999999877766 5554444
Q ss_pred c
Q 015527 385 S 385 (405)
Q Consensus 385 P 385 (405)
+
T Consensus 237 ~ 237 (350)
T 1sji_A 237 F 237 (350)
T ss_dssp H
T ss_pred H
Confidence 3
No 140
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.59 E-value=2e-15 Score=120.57 Aligned_cols=104 Identities=13% Similarity=0.165 Sum_probs=86.6
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcccHh-----------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKD----------------- 118 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~~~----------------- 118 (405)
.+.+++++.++..-..+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+++
T Consensus 15 ~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 94 (148)
T 3hcz_A 15 YMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNV 94 (148)
T ss_dssp CCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEE
T ss_pred EEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEE
Confidence 344455554443334689999999999999999999999999999987 59999999997766
Q ss_pred --------HHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 119 --------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 119 --------~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+++.|++.++|++++++ +|++..++.|..+.+.+.+.+.+.+
T Consensus 95 ~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 95 RDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp ECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred eccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 99999999999999996 9989999999877777777776654
No 141
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.59 E-value=4.7e-15 Score=104.10 Aligned_cols=74 Identities=22% Similarity=0.286 Sum_probs=66.2
Q ss_pred EEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCeeeeeecCCC-CHHHHHH
Q 015527 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGER-TRDVISA 154 (405)
Q Consensus 76 ~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~-~~~~l~~ 154 (405)
..|.||++||++|+.+.|.++++++.+++++.++.|| +++++++|+|.++||+++ +|+.+.+ |.. +.+++.+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~l~~ 74 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEEIKK 74 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHHHHH
Confidence 4689999999999999999999999998789999998 788999999999999998 8866555 887 8999988
Q ss_pred HH
Q 015527 155 WV 156 (405)
Q Consensus 155 ~i 156 (405)
++
T Consensus 75 ~l 76 (77)
T 1ilo_A 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 75
No 142
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.59 E-value=5.1e-15 Score=118.97 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=87.7
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeC----------------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDA---------------------- 113 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~---------------------- 113 (405)
.+.+++++.++..-..+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+.
T Consensus 12 ~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T 2l5o_A 12 SLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVM 91 (153)
T ss_dssp EEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEE
T ss_pred EeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEE
Confidence 344455554443333689999999999999999999999999999987 588887763
Q ss_pred -cccHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhcC
Q 015527 114 -YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 114 -~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (405)
+.+..+++.|+|.++|++++++ +|+++.++.|..+.+.+.++|.+.+..
T Consensus 92 ~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 92 YDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp ECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred cCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4466789999999999999996 898889999999999999999988753
No 143
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.58 E-value=5.7e-15 Score=119.45 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=75.3
Q ss_pred EcChhhHHHHH-cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCC---CcccceEEEEe
Q 015527 60 SLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYN---ILAYPTLYLFV 135 (405)
Q Consensus 60 ~l~~~~~~~~~-~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~---i~~~Pt~~~~~ 135 (405)
.++++.+..+. .++++++|.|||+||++|+.+.|.++++++.++ ++.|..||.+++++++++|+ +.++||+++++
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEEC
Confidence 45555555443 257899999999999999999999999999886 69999999999999999997 99999999999
Q ss_pred C-CeeeeeecCCCCHHHHHHHHH
Q 015527 136 A-GVRQFQFFGERTRDVISAWVR 157 (405)
Q Consensus 136 ~-g~~~~~~~g~~~~~~l~~~i~ 157 (405)
+ |+...++ |.... .+.+.+.
T Consensus 119 ~~G~~~~~~-g~~p~-~~~~~i~ 139 (167)
T 1z6n_A 119 EEFNLLGRF-VERPQ-AVLDGGP 139 (167)
T ss_dssp TTCCEEEEE-ESSCH-HHHHHCH
T ss_pred CCCCEEEEE-cCCCH-HHHHhHH
Confidence 5 5776666 54443 3334443
No 144
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.57 E-value=5.6e-14 Score=129.45 Aligned_cols=205 Identities=13% Similarity=0.131 Sum_probs=157.9
Q ss_pred CccccCChhHHHHHhccCCeEEEEEEcCCCCcc--HH-------HHHHHh-ccCC-cceEEEe---cCHHHHhhcCCCCC
Q 015527 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME--SE-------ELAAAS-KLHS-DVNFYQT---TSADVAEFFHIHPK 228 (405)
Q Consensus 163 ~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~~--~~-------~~~~~a-~~~~-~~~f~~~---~~~~l~~~~~~~~~ 228 (405)
.+..+ +.+.++..++.++.++|.||++||+++ .+ .+..+| .+.+ .+.|+.+ .+.+++++|+++.
T Consensus 14 ~v~~l-t~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~- 91 (367)
T 3us3_A 14 RVINV-NAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE- 91 (367)
T ss_dssp CCEEC-CTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS-
T ss_pred ccEEC-CHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc-
Confidence 35555 557888888889999999999999883 22 566666 3444 5888876 5778999999994
Q ss_pred CCCCeEEEeecCCCccccccCCCCHHHHHHHHhccCCCCccccc-ccccccccc-CCccEEEEEecCCCcHHHHHHHHHH
Q 015527 229 SKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLT-IHNAQFVFQ-DPRKQLWLFAPAYGSDKVILTFEEV 306 (405)
Q Consensus 229 ~~~p~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~p~v~~l~-~~~~~~~~~-~~~~~~i~f~~~~~~~~~~~~~~~v 306 (405)
+|++++|+.+ ....|.|.++.+.|.+|+.+...|.+..++ .+++..+.. ...+.++.|.... +......|.++
T Consensus 92 --~PTl~~f~~G--~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~-~~~~~~~f~~~ 166 (367)
T 3us3_A 92 --EDSIYVFKED--EVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNK-DSEHYKAFKEA 166 (367)
T ss_dssp --TTEEEEEETT--EEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCT-TCHHHHHHHHH
T ss_pred --CceEEEEECC--cEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCC-CchHHHHHHHH
Confidence 9999999964 567999999999999999999999998886 467777776 4445555555432 34666789999
Q ss_pred HHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeC-CCccccCCC-CCCHHHHHHHHHHHhcCce-eeeccc
Q 015527 307 AKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLNG-ELTLSSIKSFGEEFLEDKL-LNQSDQ 383 (405)
Q Consensus 307 a~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~-~~~~y~~~~-~~~~~~l~~Fi~~~~~Gkl-~~kse~ 383 (405)
|..+++++.|+.+... .+++.+|++. |.++++.. ......|+| ..+.+.|.+||....-..+ .+.++.
T Consensus 167 A~~~~~~~~F~~~~~~------~~~~~~~v~~---p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~ 237 (367)
T 3us3_A 167 AEEFHPYIPFFATFDS------KVAKKLTLKL---NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPES 237 (367)
T ss_dssp HHHHTTTSCEEEECCH------HHHHHHTCCT---TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGG
T ss_pred HHhhcCCcEEEEECCH------HHHHHcCCCC---CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhh
Confidence 9999999999998543 6788999973 78888876 455566777 5999999999999877666 444443
No 145
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.57 E-value=1.5e-14 Score=116.06 Aligned_cols=101 Identities=12% Similarity=0.030 Sum_probs=81.9
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcccHh----------------
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKD---------------- 118 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~~~---------------- 118 (405)
..+.+++++.++..-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++...+
T Consensus 18 f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d 97 (152)
T 2lrt_A 18 IQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRD 97 (152)
T ss_dssp CCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEEC
T ss_pred eEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEEC
Confidence 3445555544432222578999999999999999999999999999987 59999999987654
Q ss_pred -------HHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHH
Q 015527 119 -------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWV 156 (405)
Q Consensus 119 -------~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i 156 (405)
+++.|++.++|++++++ +|+++.++.|..+.+....-+
T Consensus 98 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 98 ANGAYSSYISLYNVTNLPSVFLVNRNNELSARGENIKDLDEAIKKL 143 (152)
T ss_dssp SSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHHHHHHH
T ss_pred CCCcchHHHHHcCcccCceEEEECCCCeEEEecCCHHHHHHHHHHH
Confidence 88899999999999997 999999999988876655443
No 146
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.57 E-value=7.7e-15 Score=116.32 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=78.0
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHH---HHHHccC-CcEEEEEeCcccHh--------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAA---AAKMLKG-EADLVMVDAYLEKD-------------- 118 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~---~~~~~~~-~v~~~~v~~~~~~~-------------- 118 (405)
.+...+++.+...-..+++++|.||++||++|+.++|.+.+ +++++++ ++.++.|+.+.+.+
T Consensus 15 ~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~ 94 (142)
T 3eur_A 15 TYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWT 94 (142)
T ss_dssp EEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSE
T ss_pred EEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccc
Confidence 44455554443222357999999999999999999999999 9999966 79999999887643
Q ss_pred ----------HHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHh
Q 015527 119 ----------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVRE 158 (405)
Q Consensus 119 ----------~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~ 158 (405)
+++.|+|.++|++++++ +|+++.+..| .+++.++|++
T Consensus 95 ~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~e 142 (142)
T 3eur_A 95 NGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDAT---LQKVEQYLAE 142 (142)
T ss_dssp EEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEEC---HHHHHHHHHC
T ss_pred cccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCCC---HHHHHHHHhC
Confidence 36789999999999997 8987777654 6888887753
No 147
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.57 E-value=1.1e-14 Score=120.83 Aligned_cols=106 Identities=14% Similarity=0.174 Sum_probs=86.7
Q ss_pred CCcEEc--ChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-Cc------EEEEEeCcc-cHhHHHhC--
Q 015527 56 KDVVSL--NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EA------DLVMVDAYL-EKDLAKEY-- 123 (405)
Q Consensus 56 ~~~~~l--~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v------~~~~v~~~~-~~~~~~~~-- 123 (405)
..+..+ +++.+...-..+++++|.||++||++|+.++|.+.++++++++ ++ .|+.|+++. +++.+++|
T Consensus 40 f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~ 119 (183)
T 3lwa_A 40 IGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVT 119 (183)
T ss_dssp CEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHH
T ss_pred eeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHH
Confidence 344555 5554443334679999999999999999999999999999977 38 999999998 66666655
Q ss_pred -----------------------CCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 124 -----------------------NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 124 -----------------------~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++.++|++++++ +|+++.++.|..+.+.|.++|.+.+.
T Consensus 120 ~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 120 DNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp HTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HcCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 689999999887 89889999999999999999988763
No 148
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.5e-13 Score=121.11 Aligned_cols=204 Identities=11% Similarity=0.149 Sum_probs=151.6
Q ss_pred CCccccCChhHHHHHh-ccCCeEEEEEEcCCCCccH---HHHHHHh-ccCCcceEEEe-----cCHHHHhhcCCCCCCCC
Q 015527 162 LGTYSITTTDEAERIL-TVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT-----TSADVAEFFHIHPKSKR 231 (405)
Q Consensus 162 ~~~~~i~~~~~~~~~l-~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~-----~~~~l~~~~~~~~~~~~ 231 (405)
+.+..+ +.++++..+ +.+.+++|.|+++||+++. +.+.+++ .+.+.+.++.+ .+..++++|++.. +
T Consensus 17 ~~vv~l-t~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~---~ 92 (298)
T 3ed3_A 17 PHISEL-TPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNG---F 92 (298)
T ss_dssp TTCEEC-CHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCB---S
T ss_pred CCeEEe-CHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCc---c
Confidence 345566 668888888 4567899999999999854 4566666 45556777765 3568999999995 9
Q ss_pred CeEEEeecCC----------------CccccccCCCCHHHHHHHHhccCCCCccccc-cccccccccCC-ccEEEEEecC
Q 015527 232 PALIFLHLEA----------------GKATPFRHQFTRLAIANFVTHTKHPLVVTLT-IHNAQFVFQDP-RKQLWLFAPA 293 (405)
Q Consensus 232 p~i~~~~~~~----------------~~~~~y~g~~~~~~l~~fi~~~~~p~v~~l~-~~~~~~~~~~~-~~~~i~f~~~ 293 (405)
|++++|+.+. .....|.|.++.+.|.+|+....-|.+..++ .+++..+.... .+.+++|...
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~~ 172 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSKQ 172 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEESS
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcCC
Confidence 9999999763 1367899999999999999999989888885 45677777664 4777777543
Q ss_pred CCcHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhh--hhcC-----C-----------CCCCCcEEEEEeC-CCccc
Q 015527 294 YGSDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVS--QEFG-----V-----------SGNAPRVIAYSAR-DAKKY 354 (405)
Q Consensus 294 ~~~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~--~~~g-----i-----------~~~~~p~i~i~~~-~~~~y 354 (405)
. .....|+.+|.++++++.|+.++..+.. ... +.|+ + .....|.+++++. .+..+
T Consensus 173 ~---~~~~~f~~~A~~~~~~~~F~~v~~~~~a---~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~ 246 (298)
T 3ed3_A 173 D---KISPVYKSIALDWLGKFDFYSISNKKLK---QLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFW 246 (298)
T ss_dssp S---SCCHHHHHHHHHTBTTEEEEEEEGGGCC---CCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEE
T ss_pred C---cchHHHHHHHHHhhcCcEEEEEcchHhh---hhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceE
Confidence 2 2335789999999999999999866321 111 2233 1 1135899999987 66777
Q ss_pred cCCC-CCCHHHHHHHHHHHhcC
Q 015527 355 VLNG-ELTLSSIKSFGEEFLED 375 (405)
Q Consensus 355 ~~~~-~~~~~~l~~Fi~~~~~G 375 (405)
.|++ .++.++|.+||.+-.+.
T Consensus 247 ~y~g~~~~~~~i~~fi~~~~~~ 268 (298)
T 3ed3_A 247 EYEGNSINKNDISKFLRDTFSI 268 (298)
T ss_dssp ECCCSSCCHHHHHHHHHHHHTC
T ss_pred EeccccCCHHHHHHHHHhhcCC
Confidence 7885 79999999999975543
No 149
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.56 E-value=7.9e-15 Score=117.71 Aligned_cols=87 Identities=22% Similarity=0.320 Sum_probs=75.8
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------------------------cHhHHHhCCC
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYNI 125 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------------------------~~~~~~~~~i 125 (405)
.+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++.|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 678999999999999999999999999999987 59999999987 5788999999
Q ss_pred cccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 126 LAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 126 ~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
.++|++++++ +|+++.++. +.+++.++|++.+.
T Consensus 108 ~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp CSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHT
T ss_pred CcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHh
Confidence 9999999996 898887764 34677777777664
No 150
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.56 E-value=7.2e-15 Score=117.27 Aligned_cols=102 Identities=21% Similarity=0.342 Sum_probs=82.2
Q ss_pred CcEEcChhhHHHH--HcCCCcEEEEEecCCChhHhhhHHHHHHHHHHc-cC-CcEEEEEeCcc-----------------
Q 015527 57 DVVSLNGKNFSEF--MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKML-KG-EADLVMVDAYL----------------- 115 (405)
Q Consensus 57 ~~~~l~~~~~~~~--~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~-~~-~v~~~~v~~~~----------------- 115 (405)
.+..++++.+... -..+++++|.||++||++|+.+.|.+.++++++ ++ ++.++.|+++.
T Consensus 15 ~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 94 (148)
T 3fkf_A 15 SLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWD 94 (148)
T ss_dssp CEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSE
T ss_pred EeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCce
Confidence 3444444443322 236799999999999999999999999999999 66 59999998886
Q ss_pred --------cHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 116 --------EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 116 --------~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+..+++.|++.++|++++++ +|++..++. +.+.+.++|.+.+.
T Consensus 95 ~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 95 QVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp EECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred EEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 34789999999999999996 897777765 88889999887763
No 151
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.56 E-value=1.7e-14 Score=115.75 Aligned_cols=92 Identities=18% Similarity=0.293 Sum_probs=80.9
Q ss_pred cCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcccH----------------------hHHHhCCCcc
Q 015527 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK----------------------DLAKEYNILA 127 (405)
Q Consensus 71 ~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~~----------------------~~~~~~~i~~ 127 (405)
..+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.++ .+++.|++.+
T Consensus 26 ~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 26 KTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp GTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred hCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 3678999999999999999999999999999987 5999999988665 6788999999
Q ss_pred cceEEEEe-CCeeeeeecCCC--CHHHHHHHHHhhhcC
Q 015527 128 YPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMTL 162 (405)
Q Consensus 128 ~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~~ 162 (405)
+|++++++ +|+++.++.|.. +.+.+.++|++.+..
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 99999996 998889999864 558999999988754
No 152
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.56 E-value=4.4e-15 Score=120.08 Aligned_cols=83 Identities=18% Similarity=0.274 Sum_probs=71.7
Q ss_pred EcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHH-H--HHHHHHccCCcEEEEEeCcccHhHHHhC--------CCccc
Q 015527 60 SLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPE-F--AAAAKMLKGEADLVMVDAYLEKDLAKEY--------NILAY 128 (405)
Q Consensus 60 ~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~-~--~~~~~~~~~~v~~~~v~~~~~~~~~~~~--------~i~~~ 128 (405)
..+++.|+....++++++|.|||+||++|+.+.|. | .++++.+++++.++.||.++.+++.+.| |+.++
T Consensus 26 ~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~ 105 (173)
T 3ira_A 26 PWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGW 105 (173)
T ss_dssp CSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCS
T ss_pred CcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCC
Confidence 34567888888889999999999999999999983 3 5677777667999999999999999988 99999
Q ss_pred ceEEEEe-CCeeeee
Q 015527 129 PTLYLFV-AGVRQFQ 142 (405)
Q Consensus 129 Pt~~~~~-~g~~~~~ 142 (405)
|++++++ +|+.+..
T Consensus 106 Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 106 PLNIIMTPGKKPFFA 120 (173)
T ss_dssp SEEEEECTTSCEEEE
T ss_pred cceeeECCCCCceee
Confidence 9999998 8876654
No 153
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.56 E-value=7.4e-15 Score=116.41 Aligned_cols=100 Identities=19% Similarity=0.292 Sum_probs=77.1
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHH---HHHHccC-CcEEEEEeCcccHhH--------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAA---AAKMLKG-EADLVMVDAYLEKDL-------------- 119 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~---~~~~~~~-~v~~~~v~~~~~~~~-------------- 119 (405)
+.+++++.+...-..+++++|.||++||++|+.++|.+.+ +++.+++ ++.++.|+++.+++.
T Consensus 12 l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~ 91 (142)
T 3ewl_A 12 YVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIV 91 (142)
T ss_dssp EECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEE
T ss_pred EECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcce
Confidence 3344444333222368999999999999999999999988 8888866 699999998866543
Q ss_pred ----------HHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 120 ----------AKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 120 ----------~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++.|+|.++|++++++ +|+++. +..+.+++.++|.+..
T Consensus 92 ~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 92 GWNKAGDIRTRQLYDIRATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp EECTTCHHHHTTCSCCCSSSEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred eeCCccchhhHHHcCCCCCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 3389999999999997 886654 5678999999998764
No 154
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.56 E-value=1.1e-14 Score=118.95 Aligned_cols=104 Identities=13% Similarity=0.233 Sum_probs=84.9
Q ss_pred CCCcEEc--ChhhHHHH-HcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEe-------------------
Q 015527 55 AKDVVSL--NGKNFSEF-MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD------------------- 112 (405)
Q Consensus 55 ~~~~~~l--~~~~~~~~-~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~------------------- 112 (405)
...+..+ +++.+... +.++++++|.||++||++|+.+.|.+++++++ ++.++.|+
T Consensus 30 ~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~ 106 (168)
T 2b1k_A 30 KFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPY 106 (168)
T ss_dssp CCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCC
T ss_pred CeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCC
Confidence 3455566 56555433 35789999999999999999999999999886 57777777
Q ss_pred ----CcccHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 113 ----AYLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 113 ----~~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++.+..+++.|+|.++|++++++ +|++..++.|..+.+.+.++|.+.+.
T Consensus 107 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 107 ALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp SEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred ceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 34556789999999999888887 89888999999999999999887763
No 155
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.55 E-value=1.8e-14 Score=116.43 Aligned_cols=106 Identities=16% Similarity=0.312 Sum_probs=86.6
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------------------
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------- 115 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~------------------- 115 (405)
..+.+++++.++..-..+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.
T Consensus 24 f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~ 103 (158)
T 3hdc_A 24 FKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDA 103 (158)
T ss_dssp CEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECT
T ss_pred ceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECc
Confidence 3445555555543334679999999999999999999999999999984 79999999987
Q ss_pred cHhHHHhCCCcccceEEEEe-CCeeeeeecCC--CCHHHHHHHHHhhhc
Q 015527 116 EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGE--RTRDVISAWVREKMT 161 (405)
Q Consensus 116 ~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~--~~~~~l~~~i~~~~~ 161 (405)
+..+++.|++.++|++++++ +|++..++.|. .+..++.+.+.+...
T Consensus 104 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 104 TGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp TSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC-
T ss_pred hHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhcc
Confidence 67899999999999999997 99999999986 456777777776654
No 156
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.55 E-value=6.9e-15 Score=116.54 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=69.8
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHH---HHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe-CCee
Q 015527 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAA---KMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV-AGVR 139 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~---~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~-~g~~ 139 (405)
+.+.....++++++|.|||+||++|+.+.|.+.+.. +..+.++..+.|| ++..+++..+++.++||+++++ +|+.
T Consensus 35 ~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCB
T ss_pred HHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCE
Confidence 334555567899999999999999999999987642 2222134444444 2445678899999999999999 9988
Q ss_pred eeeecCC-------CC---HHHHHHHHHhhh
Q 015527 140 QFQFFGE-------RT---RDVISAWVREKM 160 (405)
Q Consensus 140 ~~~~~g~-------~~---~~~l~~~i~~~~ 160 (405)
+.+..|. +. .+.+.+.+++.+
T Consensus 114 v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 114 RADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp CTTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred EEEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 8888897 44 455555555544
No 157
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.55 E-value=1.2e-14 Score=117.10 Aligned_cols=96 Identities=18% Similarity=0.279 Sum_probs=80.5
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc-----------------------ccHhHH
Q 015527 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----------------------LEKDLA 120 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~-----------------------~~~~~~ 120 (405)
+.++.....+++++|.||++||++|+.+.|.+.+++++ +++.++.|+++ .+..++
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS 110 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH
Confidence 44543344589999999999999999999999999877 46888888764 345788
Q ss_pred HhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 121 KEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 121 ~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+.|++.++|++++++ +|++..++.|..+.+.+.++|.+.+.
T Consensus 111 ~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 111 IEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp HHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred HhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 999999999988886 99888999999999999999987763
No 158
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.54 E-value=1.7e-14 Score=117.45 Aligned_cols=102 Identities=13% Similarity=0.247 Sum_probs=83.1
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc------------------ccH-
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------LEK- 117 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~------------------~~~- 117 (405)
.+..++++.+...-..+++++|.||++||++|+.+.|.+.+++++++ ++.|+.|+++ +++
T Consensus 21 ~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~ 99 (165)
T 3ha9_A 21 SLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPE 99 (165)
T ss_dssp CEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHH
T ss_pred EeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHH
Confidence 34444454443332367999999999999999999999999999998 8999999988 442
Q ss_pred ---------------------hHHHhCCCcccceEEEEe-CCeeeeeecCCC-CHHHHHHHHHhhhc
Q 015527 118 ---------------------DLAKEYNILAYPTLYLFV-AGVRQFQFFGER-TRDVISAWVREKMT 161 (405)
Q Consensus 118 ---------------------~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~-~~~~l~~~i~~~~~ 161 (405)
.+++.|+|.++|++++++ +|+++. .|.. +.+.|.+.|+++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 100 MFRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp HHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHhc
Confidence 789999999999999997 886666 8888 99999999987653
No 159
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.54 E-value=2.2e-14 Score=115.36 Aligned_cols=104 Identities=20% Similarity=0.323 Sum_probs=84.4
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc--------------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-------------------- 116 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~-------------------- 116 (405)
+.+++++.++..-..+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+
T Consensus 13 l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 92 (154)
T 3kcm_A 13 LNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLL 92 (154)
T ss_dssp EECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEE
T ss_pred EEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEe
Confidence 34444444432223679999999999999999999999999999987 799999998875
Q ss_pred ---HhHHHhCCCcccceEEEEe-CCeeeeeecCCC--CHHHHHHHHHhhhc
Q 015527 117 ---KDLAKEYNILAYPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (405)
Q Consensus 117 ---~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (405)
..+++.|++.++|++++++ +|+++.++.|.. +.+.+.++|++...
T Consensus 93 d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 93 DADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp CTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred cCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 3488899999999999997 998889999975 67799999987764
No 160
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.53 E-value=3.6e-14 Score=116.79 Aligned_cols=103 Identities=17% Similarity=0.273 Sum_probs=84.2
Q ss_pred CCcEEcCh--hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC--------------------
Q 015527 56 KDVVSLNG--KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------- 113 (405)
Q Consensus 56 ~~~~~l~~--~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~-------------------- 113 (405)
..+.++++ ..+......+++++|.||++||++|+.+.|.+.+++++ ++.++.|++
T Consensus 39 f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~ 115 (176)
T 3kh7_A 39 FDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLL 115 (176)
T ss_dssp CEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSE
T ss_pred cEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCce
Confidence 44555555 44443334689999999999999999999999999887 588888875
Q ss_pred ---cccHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 114 ---YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 114 ---~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+.+..+++.|++.++|++++++ +|++..++.|..+.+.+.++|.+.+.
T Consensus 116 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 116 SISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp EEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred EEECCcchHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3445688899999999999997 89999999999999999999887763
No 161
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=5.6e-14 Score=112.45 Aligned_cols=101 Identities=17% Similarity=0.288 Sum_probs=82.1
Q ss_pred CcEEcChhhHHHH--HcCCCcEEEEEecCCChh--HhhhHHHHHHHHHHc-cC-CcEEEEEeCcccH-------------
Q 015527 57 DVVSLNGKNFSEF--MGKNRNVMVMFYANWCYW--SKKLAPEFAAAAKML-KG-EADLVMVDAYLEK------------- 117 (405)
Q Consensus 57 ~~~~l~~~~~~~~--~~~~~~~~v~f~a~~C~~--C~~~~~~~~~~~~~~-~~-~v~~~~v~~~~~~------------- 117 (405)
.+.+++++.+... -..+++++|.||++||++ |+.++|.+.++++++ ++ ++.++.|+++..+
T Consensus 15 ~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~ 94 (150)
T 3fw2_A 15 SLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLD 94 (150)
T ss_dssp CEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCC
T ss_pred EeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCC
Confidence 3444555444322 236799999999999999 999999999999999 65 5999999988664
Q ss_pred ------------hHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 118 ------------DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 118 ------------~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
.+++.|++.++|++++++ +|+++.++. +.+.+.+.|.+.+
T Consensus 95 ~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 147 (150)
T 3fw2_A 95 WEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIV 147 (150)
T ss_dssp SEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHH
T ss_pred ceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHH
Confidence 788999999999999996 898777774 7888888887765
No 162
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.49 E-value=1.1e-13 Score=115.08 Aligned_cols=107 Identities=20% Similarity=0.269 Sum_probs=84.7
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc-----HhHHHhCCCc----
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----KDLAKEYNIL---- 126 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~-----~~~~~~~~i~---- 126 (405)
.+.+++++.++..-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++.+ ..+++++++.
T Consensus 44 ~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 123 (186)
T 1jfu_A 44 AFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGY 123 (186)
T ss_dssp EEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCC
T ss_pred EeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCce
Confidence 344455544432223689999999999999999999999999999974 799999998865 4566777764
Q ss_pred -------------------ccceEEEEe-CCeeeeeecCCCC--HHHHHHHHHhhhcCC
Q 015527 127 -------------------AYPTLYLFV-AGVRQFQFFGERT--RDVISAWVREKMTLG 163 (405)
Q Consensus 127 -------------------~~Pt~~~~~-~g~~~~~~~g~~~--~~~l~~~i~~~~~~~ 163 (405)
++|++++++ +|+++.++.|..+ .+++.++|++.+..+
T Consensus 124 ~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 124 FNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKA 182 (186)
T ss_dssp EECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC--
T ss_pred EECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccc
Confidence 899999997 9988899999765 789999999887543
No 163
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.49 E-value=7.9e-14 Score=110.58 Aligned_cols=84 Identities=14% Similarity=0.175 Sum_probs=70.8
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcccH--------------------------hHHHhCC
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK--------------------------DLAKEYN 124 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~~--------------------------~~~~~~~ 124 (405)
.+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++.++ .+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 679999999999999999999999999999986 6999999887432 4778899
Q ss_pred CcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHh
Q 015527 125 ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVRE 158 (405)
Q Consensus 125 i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~ 158 (405)
|.++|++++++ +|+++.+.. ..+++.+.+.+
T Consensus 111 v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 142 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVIIAANV---TPEKLTEILKA 142 (143)
T ss_dssp GGGCCCEEEECTTSBEEEESC---CHHHHHHHHTC
T ss_pred CCCCCcEEEECCCCEEEEccC---CHHHHHHHHHh
Confidence 99999999998 898777654 45677766653
No 164
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.49 E-value=7.7e-14 Score=102.77 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=69.9
Q ss_pred cEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHH
Q 015527 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (405)
Q Consensus 75 ~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (405)
..++.||++||++|+.+.|.+++++++++ +.+..||++++++++.+|+++ +|++++|.+|+.+ ..|..+.+.|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~~ 104 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIGA 104 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHHH
Confidence 57999999999999999999999999874 899999999999999999997 9999999999665 458889999988
Q ss_pred HH
Q 015527 155 WV 156 (405)
Q Consensus 155 ~i 156 (405)
||
T Consensus 105 ~L 106 (107)
T 2fgx_A 105 YL 106 (107)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 165
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.49 E-value=1.1e-13 Score=125.54 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=86.0
Q ss_pred EcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-----------------------
Q 015527 60 SLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------- 115 (405)
Q Consensus 60 ~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------- 115 (405)
..+++.++..-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++.
T Consensus 69 d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv 148 (352)
T 2hyx_A 69 TPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPI 148 (352)
T ss_dssp SGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCE
T ss_pred CCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccE
Confidence 444444443333689999999999999999999999999999987 79999998752
Q ss_pred ----cHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 116 ----EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 116 ----~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+..+++.|+|.++|++++++ +|+++.++.|..+.+.+.++|++.+
T Consensus 149 ~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 149 ALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp EECTTSHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred EeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 35788999999999999996 9999999999999999999998877
No 166
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.49 E-value=1.1e-13 Score=116.17 Aligned_cols=103 Identities=18% Similarity=0.224 Sum_probs=84.2
Q ss_pred EcChhhHHHHHcCCC-cEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCc-----------------------
Q 015527 60 SLNGKNFSEFMGKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY----------------------- 114 (405)
Q Consensus 60 ~l~~~~~~~~~~~~~-~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~----------------------- 114 (405)
.++++.++..-..++ +++|.||++||++|+.+.|.+.++++++++ ++.++.|+++
T Consensus 32 ~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~ 111 (196)
T 2ywi_A 32 VIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYP 111 (196)
T ss_dssp TTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCC
T ss_pred cCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCC
Confidence 445544432223566 599999999999999999999999999987 6999999984
Q ss_pred ------ccHhHHHhCCCcccceEEEEe-CCeeeee---------ecCCCCHHHHHHHHHhhhcC
Q 015527 115 ------LEKDLAKEYNILAYPTLYLFV-AGVRQFQ---------FFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 115 ------~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~---------~~g~~~~~~l~~~i~~~~~~ 162 (405)
.+..+++.|++.++|++++++ +|+++.+ +.|..+.++|.+.|.+.+..
T Consensus 112 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 112 FPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp SCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred ceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 355789999999999999997 8988777 56778999999999988754
No 167
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.48 E-value=9.7e-14 Score=110.21 Aligned_cols=88 Identities=16% Similarity=0.204 Sum_probs=72.0
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC--CcEEEEEeCccc------------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLE------------------ 116 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~v~~~~~------------------ 116 (405)
.+.+++++.++..-..+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+
T Consensus 12 ~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 12 NVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 455566655543334678999999999999999999999999999983 799999988763
Q ss_pred ------HhHHHhCCCcccceEEEEe--CCeeeeeec
Q 015527 117 ------KDLAKEYNILAYPTLYLFV--AGVRQFQFF 144 (405)
Q Consensus 117 ------~~~~~~~~i~~~Pt~~~~~--~g~~~~~~~ 144 (405)
..+++.|+|.++|++++++ +|+++.++.
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCH
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccc
Confidence 5789999999999999997 787666543
No 168
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.48 E-value=1.3e-13 Score=114.77 Aligned_cols=105 Identities=19% Similarity=0.267 Sum_probs=82.4
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc-----------------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY----------------------- 114 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~----------------------- 114 (405)
+.+++++.++..-..+++++|.||++||++|+.++|.+.++++++++++.++.|+++
T Consensus 18 l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~ 97 (188)
T 2cvb_A 18 LPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIF 97 (188)
T ss_dssp EECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCC
T ss_pred eecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCC
Confidence 334444443322235799999999999999999999999999999866999999883
Q ss_pred ------ccHhHHHhCCCcccceEEEEe-CCeeeee--------ecCCCCHHHHHHHHHhhhcC
Q 015527 115 ------LEKDLAKEYNILAYPTLYLFV-AGVRQFQ--------FFGERTRDVISAWVREKMTL 162 (405)
Q Consensus 115 ------~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~--------~~g~~~~~~l~~~i~~~~~~ 162 (405)
.+..+++.|++.++|++++++ +|+++.+ +.|..+.++|.+.|++.+..
T Consensus 98 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 98 FPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp SCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred ceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 355788999999999999997 8977665 23444778899999888753
No 169
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.47 E-value=8.6e-14 Score=99.08 Aligned_cols=74 Identities=15% Similarity=0.138 Sum_probs=65.2
Q ss_pred EEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHH
Q 015527 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (405)
Q Consensus 77 ~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (405)
++.||++||++|+.+.|.+++++..+ +..||++++++++++|+++ +|++++ .+|+.+. |..+.+.|.++|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~---g~~~~~~L~~~l 72 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD---WPFDAPRLRAWL 72 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE---SCCCHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe---CCCCHHHHHHHH
Confidence 78899999999999999999876553 6889999999999999998 999988 8886653 889999999999
Q ss_pred Hhhh
Q 015527 157 REKM 160 (405)
Q Consensus 157 ~~~~ 160 (405)
.+.+
T Consensus 73 ~~~~ 76 (87)
T 1ttz_A 73 DAAP 76 (87)
T ss_dssp HTCC
T ss_pred HHHH
Confidence 8665
No 170
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.47 E-value=9.5e-14 Score=112.89 Aligned_cols=87 Identities=16% Similarity=0.218 Sum_probs=70.8
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC--CcEEEEEeCccc------------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLE------------------ 116 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~v~~~~~------------------ 116 (405)
.+..+++ .+...-..+++++|+||++||++|+.++|.+.++++++++ ++.++.|+++..
T Consensus 33 ~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3s9f_A 33 KLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPF 111 (165)
T ss_dssp CEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCT
T ss_pred eeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCccccc
Confidence 3444444 4432223679999999999999999999999999999985 788999988776
Q ss_pred ------HhHHHhCCCcccceEEEEe-C-Ceeeeeec
Q 015527 117 ------KDLAKEYNILAYPTLYLFV-A-GVRQFQFF 144 (405)
Q Consensus 117 ------~~~~~~~~i~~~Pt~~~~~-~-g~~~~~~~ 144 (405)
..+++.|+|.++|++++++ + |+++.+..
T Consensus 112 ~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 112 ANRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCH
T ss_pred CchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEeccc
Confidence 6789999999999999998 5 87766543
No 171
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.46 E-value=1.3e-13 Score=109.78 Aligned_cols=86 Identities=19% Similarity=0.232 Sum_probs=69.5
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHcc--CCcEEEEEeCccc-------------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------- 116 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~--~~v~~~~v~~~~~------------------- 116 (405)
+.++++ .++..-..+++++|+||++||++|+.+.|.+.+++++++ +++.++.|+++.+
T Consensus 14 l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 92 (146)
T 1o8x_A 14 LRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFA 92 (146)
T ss_dssp EEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGG
T ss_pred EEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccc
Confidence 444444 443333367899999999999999999999999999998 3788999988763
Q ss_pred -----HhHHHhCCCcccceEEEEe--CCeeeeeec
Q 015527 117 -----KDLAKEYNILAYPTLYLFV--AGVRQFQFF 144 (405)
Q Consensus 117 -----~~~~~~~~i~~~Pt~~~~~--~g~~~~~~~ 144 (405)
..+++.|+|.++|++++++ +|+++.+..
T Consensus 93 ~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 93 QSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp GHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCH
T ss_pred hhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecc
Confidence 4789999999999999998 887666543
No 172
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.44 E-value=2.7e-13 Score=110.10 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=78.5
Q ss_pred CCCcEEEEEecCCChh-HhhhHHHHHHHHHHccC-----CcEEEEEeCccc----------------------------H
Q 015527 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLKG-----EADLVMVDAYLE----------------------------K 117 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~-C~~~~~~~~~~~~~~~~-----~v~~~~v~~~~~----------------------------~ 117 (405)
.+++++|.||++||++ |+.++|.+.++++++++ ++.++.|+++.. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5799999999999998 99999999999999863 788888888652 1
Q ss_pred hHHHhCCCcccc---------------eEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 118 DLAKEYNILAYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 118 ~~~~~~~i~~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
.+++.|++.+.| ++++++ +|+++.++.|..+.++|.+.|.+.+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 378899999999 788887 99999999999999999999988763
No 173
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.43 E-value=2.5e-13 Score=107.77 Aligned_cols=72 Identities=19% Similarity=0.321 Sum_probs=63.3
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHcc--CCcEEEEEeCccc------------------------HhHHHhCCC
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------------KDLAKEYNI 125 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~--~~v~~~~v~~~~~------------------------~~~~~~~~i 125 (405)
.+++++|.||++||++|+.+.|.+.+++++++ +++.++.|+++.+ ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 67899999999999999999999999999997 3788888888763 468899999
Q ss_pred cccceEEEEe--CCeeeeee
Q 015527 126 LAYPTLYLFV--AGVRQFQF 143 (405)
Q Consensus 126 ~~~Pt~~~~~--~g~~~~~~ 143 (405)
.++|++++++ +|+++.+.
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 107 ESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp CSSSEEEEEETTTCCEEESC
T ss_pred CCCCEEEEEECCCCeEEecc
Confidence 9999999998 78666554
No 174
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.43 E-value=4.1e-13 Score=109.88 Aligned_cols=90 Identities=18% Similarity=0.248 Sum_probs=78.7
Q ss_pred CCCcEEEEEecCCChh-HhhhHHHHHHHHHHcc-----CCcEEEEEeCccc----------------------------H
Q 015527 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLK-----GEADLVMVDAYLE----------------------------K 117 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~-C~~~~~~~~~~~~~~~-----~~v~~~~v~~~~~----------------------------~ 117 (405)
.+++++|.||++||++ |+.++|.+.+++++++ .++.++.|+++.. .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5789999999999998 9999999999999985 3799999988731 2
Q ss_pred hHHHhCCCcccc---------------eEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 118 DLAKEYNILAYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 118 ~~~~~~~i~~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
.+++.|++...| ++++++ +|+++.++.|..+.+++.+.|.+.+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 578899999888 888887 89999999999999999999988774
No 175
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.42 E-value=1.6e-11 Score=106.98 Aligned_cols=196 Identities=16% Similarity=0.258 Sum_probs=144.1
Q ss_pred CcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEe
Q 015527 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 57 ~~~~l-~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (405)
.+..| +.++++.++..+++++|.|+++|| ....+.|.++|+.+.+++.|+.+. +.+++++|++.+ |++++|+
T Consensus 7 ~v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~~fk 79 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGIILFR 79 (252)
T ss_dssp CEEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEEEEC
T ss_pred CceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEEEEc
Confidence 46777 467788888888899999999984 556789999999998889999884 577999999997 9999998
Q ss_pred CC-------eeeeee-cCCCCHHHHHHHHHhhhcCCccccCChhHHHHHhccCCeEEEEEEcCCCCc-------cHHHHH
Q 015527 136 AG-------VRQFQF-FGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGM-------ESEELA 200 (405)
Q Consensus 136 ~g-------~~~~~~-~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~-------~~~~~~ 200 (405)
.+ .....| .|..+.+.|.+||....-|.+.+++. +....+ ... +.++.|+...... ....+.
T Consensus 80 ~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~-~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~ 156 (252)
T 2h8l_A 80 PSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLI-QGK-DLLIAYYDVDYEKNAKGSNYWRNRVM 156 (252)
T ss_dssp CGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECT-TTHHHH-SSS-SEEEEEECCBTTTBHHHHHHHHHHHH
T ss_pred chhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeeccc-ccHhhh-cCC-CeEEEEeecchhhcchhHHHHHHHHH
Confidence 53 245678 89999999999999999898988865 445555 333 4455555432221 234455
Q ss_pred HHh-ccCCc---ceEEEecC---HHHHhhcCCCC-CCCCCeEEEeecCCCccccccCCCCHHH--HHHHHhcc
Q 015527 201 AAS-KLHSD---VNFYQTTS---ADVAEFFHIHP-KSKRPALIFLHLEAGKATPFRHQFTRLA--IANFVTHT 263 (405)
Q Consensus 201 ~~a-~~~~~---~~f~~~~~---~~l~~~~~~~~-~~~~p~i~~~~~~~~~~~~y~g~~~~~~--l~~fi~~~ 263 (405)
.+| +++++ +.|+.+.. ..+.+.||++. ....|.++++... +..+.+++.++.+. |.+|+...
T Consensus 157 ~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~-~~ky~~~~~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 157 MVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAK-GEKFVMQEEFSRDGKALERFLQDY 228 (252)
T ss_dssp HHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTT-SCEEECCSCCCTTSHHHHHHHHHH
T ss_pred HHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCc-CcEecCCcccCcchHHHHHHHHHH
Confidence 666 45555 88887743 34677889931 1247999998653 34555777888888 99999863
No 176
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.42 E-value=7.3e-13 Score=110.37 Aligned_cols=106 Identities=15% Similarity=0.128 Sum_probs=83.3
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------c----HhHH-H-
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLA-K- 121 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~-~- 121 (405)
..+.+++++.+...-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . .+.+ +
T Consensus 31 f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 110 (190)
T 2vup_A 31 FEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTK 110 (190)
T ss_dssp SCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHH
T ss_pred eEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHh
Confidence 3444555554443333679999999999999999999999999999987 69999998872 1 1222 2
Q ss_pred ----------------------------hCCCcccc------eEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 122 ----------------------------EYNILAYP------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 122 ----------------------------~~~i~~~P------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
.+++.++| ++++++ +|+++.++.|..+.+.+.+.|.+.+.
T Consensus 111 ~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 111 FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp HCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 14788899 888887 99999999999999999999988874
No 177
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.42 E-value=7.5e-13 Score=112.73 Aligned_cols=108 Identities=18% Similarity=0.196 Sum_probs=84.0
Q ss_pred CCCcEEcChhhHHHHHcCCC-cEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCc------------------
Q 015527 55 AKDVVSLNGKNFSEFMGKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY------------------ 114 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~-~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~------------------ 114 (405)
...+.+++++.+...-..++ +++|.||++||++|+.+.|.++++++++++ ++.++.|+++
T Consensus 40 ~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~ 119 (218)
T 3u5r_E 40 DFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVK 119 (218)
T ss_dssp CCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHH
T ss_pred CcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHH
Confidence 34555566655543333567 599999999999999999999999999987 5999999983
Q ss_pred -----------ccHhHHHhCCCcccceEEEEe-CCeeeeeec---------CCCCHHHHHHHHHhhhcC
Q 015527 115 -----------LEKDLAKEYNILAYPTLYLFV-AGVRQFQFF---------GERTRDVISAWVREKMTL 162 (405)
Q Consensus 115 -----------~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~---------g~~~~~~l~~~i~~~~~~ 162 (405)
.+..+++.|++.++|++++++ +|+++.+.. |..+.++|.+.|++.+..
T Consensus 120 ~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 120 AYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp HHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred HhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcC
Confidence 356789999999999999997 887664421 245578888888888754
No 178
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.41 E-value=7.4e-13 Score=109.98 Aligned_cols=108 Identities=13% Similarity=0.125 Sum_probs=83.0
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------c-HhHHH---
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E-KDLAK--- 121 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------~-~~~~~--- 121 (405)
++..+.+++++.+...-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . ..+.+
T Consensus 27 p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~ 106 (187)
T 3dwv_A 27 FDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVC 106 (187)
T ss_dssp GGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCC
T ss_pred CCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHH
Confidence 334555666665553334689999999999999999999999999999987 69999998762 1 11211
Q ss_pred -h--------------------------------CCCcccc---eEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 122 -E--------------------------------YNILAYP---TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 122 -~--------------------------------~~i~~~P---t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
. +++.++| ++++++ +|+++.++.|..+.+.|.+.|.+.+.
T Consensus 107 ~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 107 TKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp BCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred hccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 1 2344567 999997 99999999999999999999998875
No 179
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.40 E-value=1.1e-12 Score=106.28 Aligned_cols=90 Identities=16% Similarity=0.214 Sum_probs=73.7
Q ss_pred CcEEcChhhHHHHHcCCCc-EEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCc-------------------
Q 015527 57 DVVSLNGKNFSEFMGKNRN-VMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY------------------- 114 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~-~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~------------------- 114 (405)
.+.+++++.++..-..++. ++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++
T Consensus 12 ~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 91 (161)
T 3drn_A 12 EGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILV 91 (161)
T ss_dssp EEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEE
T ss_pred EeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEE
Confidence 4445555544322235676 999999 99999999999999999999987 5999999887
Q ss_pred --ccHhHHHhCCCcc----cceEEEEe-CCeeeeeecCC
Q 015527 115 --LEKDLAKEYNILA----YPTLYLFV-AGVRQFQFFGE 146 (405)
Q Consensus 115 --~~~~~~~~~~i~~----~Pt~~~~~-~g~~~~~~~g~ 146 (405)
.+..+++.|++.+ +|++++++ +|++...+.|.
T Consensus 92 ~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 92 SDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp ECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECS
T ss_pred ECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecC
Confidence 4567889999999 99999997 99988999984
No 180
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.40 E-value=3.8e-13 Score=110.11 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=79.4
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------c----HhHH----
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLA---- 120 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~---- 120 (405)
.+.+++++.++..-..+++++|.||++||++|+ ++|.+.++++++++ ++.++.|+++. . ...+
T Consensus 16 ~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~ 94 (171)
T 3cmi_A 16 APVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNY 94 (171)
T ss_dssp CCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------
T ss_pred EEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhcc
Confidence 344444444432223689999999999999999 99999999999987 59999998741 1 1122
Q ss_pred --------------------------HhCCCcccc------eEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 121 --------------------------KEYNILAYP------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 121 --------------------------~~~~i~~~P------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+.|++.++| ++++++ +|+++.++.|..+.+.+.+.|.+.+.
T Consensus 95 ~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 95 GVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred CCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 246888999 888886 99999999999999999999988764
No 181
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.07 E-value=4e-14 Score=114.49 Aligned_cols=103 Identities=16% Similarity=0.108 Sum_probs=77.8
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHH-HHHHcc-C-CcEEEEEeCcccHhHHHhC----------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAA-AAKMLK-G-EADLVMVDAYLEKDLAKEY---------- 123 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~-~~~~~~-~-~v~~~~v~~~~~~~~~~~~---------- 123 (405)
.+.+++++.++..-..+++++|.||++||++|+.+.|.+.+ +++.++ + ++.++.|++++.++.+++|
T Consensus 17 ~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 96 (159)
T 2ls5_A 17 TITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPL 96 (159)
Confidence 44455565555333467899999999999999999999998 888887 3 7999999988765544443
Q ss_pred ------------C--CcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 124 ------------N--ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 124 ------------~--i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+ +.++|++++++ +|+++.++.| .+.+++.+++.+..
T Consensus 97 ~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 97 GLDPGADIFAKYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQIN 147 (159)
Confidence 3 57799999996 8988888877 46667777666544
No 182
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.37 E-value=1e-11 Score=115.10 Aligned_cols=199 Identities=17% Similarity=0.213 Sum_probs=132.8
Q ss_pred CccccCChhHHHHHhccCCeEEEEEEcCCCCcc---HHHHHHHh-cc------CCcceEEEe---cCHHHHhhcCCCCCC
Q 015527 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KL------HSDVNFYQT---TSADVAEFFHIHPKS 229 (405)
Q Consensus 163 ~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~------~~~~~f~~~---~~~~l~~~~~~~~~~ 229 (405)
.+..+ +.+.++..+.+++.++|.|+++||+++ .+.|..++ .+ .+.+.|+.+ .+..++++++++.
T Consensus 6 ~v~~l-~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~-- 82 (382)
T 2r2j_A 6 EITSL-DTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK-- 82 (382)
T ss_dssp --CBC-CTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE--
T ss_pred ceEEC-CHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc--
Confidence 35556 446777888888999999999999985 45566666 34 345788876 4678999999994
Q ss_pred CCCeEEEeecCCCccccccCCCCHHHHHHHHhccCCCCcccccc-ccccccccCCccEEEEEecCCCcHHHHHHHHHHHH
Q 015527 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLTI-HNAQFVFQDPRKQLWLFAPAYGSDKVILTFEEVAK 308 (405)
Q Consensus 230 ~~p~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~~~p~v~~l~~-~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~va~ 308 (405)
+|++++|+.+......|.|.++.+.|.+|+.....|.+..++. ..+.. +....+.++.|....+ ......|.++|.
T Consensus 83 -~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~-~~~~~~f~~~A~ 159 (382)
T 2r2j_A 83 -YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKD-SDNYRVFERVAN 159 (382)
T ss_dssp -ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSS-SHHHHHHHHHHH
T ss_pred -CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCC-ChhHHHHHHHHH
Confidence 9999999865322226999999999999999988888888754 45666 4444455555554433 344678999999
Q ss_pred HhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeC--CCccccCCCCC-CHHHHHHHHHHHhcCce
Q 015527 309 ALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR--DAKKYVLNGEL-TLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 309 ~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~--~~~~y~~~~~~-~~~~l~~Fi~~~~~Gkl 377 (405)
.+++++.|+.+.+. +.+.++++. .| +++... +.....|+|.+ +.++|.+||+...-..+
T Consensus 160 ~~~~~~~F~~~~~~-------~~~~~~v~~--~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v 221 (382)
T 2r2j_A 160 ILHDDCAFLSAFGD-------VSKPERYSG--DN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLV 221 (382)
T ss_dssp HHTTTCEEEEEESC-------C----------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSS
T ss_pred HhhccceEEEEehh-------hHHhhCCCC--Cc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCce
Confidence 99999999888652 245667753 46 555443 23456688888 89999999998655544
No 183
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.37 E-value=9.8e-13 Score=107.36 Aligned_cols=105 Identities=15% Similarity=0.112 Sum_probs=78.9
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------c----HhH-HHhC
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDL-AKEY 123 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~-~~~~ 123 (405)
.+.+++++.++..-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . ... .+++
T Consensus 15 ~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 94 (169)
T 2v1m_A 15 TVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKY 94 (169)
T ss_dssp EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHH
T ss_pred eeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhc
Confidence 344444444432223679999999999999999999999999999987 69999998863 1 122 1222
Q ss_pred -----------------------------C-----CcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 124 -----------------------------N-----ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 124 -----------------------------~-----i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+ |..+|++++++ +|+++.++.|..+.+.+.+.|.+.+.
T Consensus 95 ~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 95 GVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp CCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred CCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 3 33458999997 99999999999888899888887763
No 184
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.37 E-value=5.6e-13 Score=109.17 Aligned_cols=88 Identities=14% Similarity=0.200 Sum_probs=75.3
Q ss_pred CCCcEEEEEecCCChh-HhhhHHHHHHHHHHccC----CcEEEEEeCccc----------------------------Hh
Q 015527 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLKG----EADLVMVDAYLE----------------------------KD 118 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~-C~~~~~~~~~~~~~~~~----~v~~~~v~~~~~----------------------------~~ 118 (405)
.+++++|.||++||++ |+.+.|.+.++++++++ ++.++.|+++.+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 6789999999999997 99999999999999874 699999998743 24
Q ss_pred HHHhCC---------------CcccceEEEEeCCeeeeeecCCC--CHHHHHHHHHhh
Q 015527 119 LAKEYN---------------ILAYPTLYLFVAGVRQFQFFGER--TRDVISAWVREK 159 (405)
Q Consensus 119 ~~~~~~---------------i~~~Pt~~~~~~g~~~~~~~g~~--~~~~l~~~i~~~ 159 (405)
+++.|+ +.++|+++++++|+++.++.|.. +.+.|.+.|+++
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 666665 46789999999998889999987 899999988765
No 185
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.36 E-value=1e-12 Score=107.41 Aligned_cols=104 Identities=10% Similarity=0.120 Sum_probs=80.2
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------c----HhHHH-hC-
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAK-EY- 123 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~~-~~- 123 (405)
+.+++++.++..-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . .+.++ ++
T Consensus 17 l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
T 2p5q_A 17 VKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFK 96 (170)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTC
T ss_pred EEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcC
Confidence 44444444432223689999999999999999999999999999987 59999999862 1 22233 33
Q ss_pred ----------------------------CC--cccc---eEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 124 ----------------------------NI--LAYP---TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 124 ----------------------------~i--~~~P---t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++ .++| ++++++ +|+++.++.|..+.+.+.+.|.+.+.
T Consensus 97 ~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 97 SEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 34 5678 888887 99999999999999999999988764
No 186
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.35 E-value=3.3e-12 Score=97.35 Aligned_cols=104 Identities=15% Similarity=0.235 Sum_probs=92.5
Q ss_pred hhhcCCccc--cCChhHHHHHhccCCeEEEEEEcCCCCccHHHHHHHhccCCcceEEEecCHHHHhhcCCCCCCCCCeEE
Q 015527 158 EKMTLGTYS--ITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALI 235 (405)
Q Consensus 158 ~~~~~~~~~--i~~~~~~~~~l~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~i~ 235 (405)
+..+|+... |.+.++++.+++.+++++|+||.+++++.++.|.++|....++.|+.+++.+++++++++ .|+++
T Consensus 15 kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~~t~~~~v~~~~~v~----~~~vv 90 (124)
T 2l4c_A 15 DGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNIT----GNTIC 90 (124)
T ss_dssp CCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHCTTSEEEEECCHHHHHHTTCC----SSCEE
T ss_pred hccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhCCCceEEEEChHHHHHHcCCC----CCeEE
Confidence 456677655 899999999999999999999999999999999999954499999999999999999998 49999
Q ss_pred EeecCCCccccccC----CCCHHHHHHHHhccCC
Q 015527 236 FLHLEAGKATPFRH----QFTRLAIANFVTHTKH 265 (405)
Q Consensus 236 ~~~~~~~~~~~y~g----~~~~~~l~~fi~~~~~ 265 (405)
+|++.++....|+| +++.++|.+||..|++
T Consensus 91 lfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 91 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp EEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred EEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 99998778888987 7899999999998763
No 187
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.35 E-value=1.1e-12 Score=108.33 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=79.3
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------c----HhHHHh--
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKE-- 122 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~~~-- 122 (405)
.+.+++++.++..-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . .+.+++
T Consensus 33 ~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~ 112 (181)
T 2p31_A 33 KAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTY 112 (181)
T ss_dssp EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHH
T ss_pred EeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhc
Confidence 344445444432223679999999999999999999999999999987 59999998863 1 122333
Q ss_pred ----------------------CCCcccc-------eEEEEe-CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 123 ----------------------YNILAYP-------TLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 123 ----------------------~~i~~~P-------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
|++.++| ++++++ +|+++.++.|..+.++|.+.|.+.+
T Consensus 113 ~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 113 SVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp CCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred CCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 2245678 888887 9989999999999999999998764
No 188
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.35 E-value=1.1e-12 Score=110.63 Aligned_cols=89 Identities=8% Similarity=-0.005 Sum_probs=72.3
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc--------cHh---HHH------hCC---------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------EKD---LAK------EYN--------- 124 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~--------~~~---~~~------~~~--------- 124 (405)
.+++++|+|||+||++|++++|.++++++++++ ++.++.|++++ ... .++ +++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~ 125 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKC 125 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEEEe
Confidence 678999999999999999999999999999987 69999998861 112 222 333
Q ss_pred --------------------------------------------CcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhh
Q 015527 125 --------------------------------------------ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 125 --------------------------------------------i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
|...|++++++ +|+++.++.|..+.++|.+.|++.
T Consensus 126 d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~l 205 (208)
T 2f8a_A 126 EVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEAL 205 (208)
T ss_dssp CCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred ecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 23348899997 999999999999988898888876
Q ss_pred h
Q 015527 160 M 160 (405)
Q Consensus 160 ~ 160 (405)
+
T Consensus 206 l 206 (208)
T 2f8a_A 206 L 206 (208)
T ss_dssp H
T ss_pred h
Confidence 5
No 189
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.02 E-value=9.3e-14 Score=110.11 Aligned_cols=87 Identities=18% Similarity=0.269 Sum_probs=68.3
Q ss_pred CcEEcChhhHHHHH-cCCC-cEEEEEecCCChhHhhhHHHHHHHHHHcc---CCcEEEEEeCccc---------------
Q 015527 57 DVVSLNGKNFSEFM-GKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLK---GEADLVMVDAYLE--------------- 116 (405)
Q Consensus 57 ~~~~l~~~~~~~~~-~~~~-~~~v~f~a~~C~~C~~~~~~~~~~~~~~~---~~v~~~~v~~~~~--------------- 116 (405)
.+.+++++.++..- ..++ +++|.||++||++|+.+.|.+.+++++++ .++.++.|++++.
T Consensus 8 ~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~ 87 (143)
T 2lus_A 8 KLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDW 87 (143)
Confidence 34455555554322 3566 99999999999999999999999999983 3688888887755
Q ss_pred ----------HhHHHhCCCcccceEEEEe-CCeeeeee
Q 015527 117 ----------KDLAKEYNILAYPTLYLFV-AGVRQFQF 143 (405)
Q Consensus 117 ----------~~~~~~~~i~~~Pt~~~~~-~g~~~~~~ 143 (405)
..+++.|+|.++|++++++ +|+++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 125 (143)
T 2lus_A 88 LAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMN 125 (143)
Confidence 3688999999999999998 89666553
No 190
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.33 E-value=3.5e-12 Score=103.10 Aligned_cols=101 Identities=7% Similarity=0.144 Sum_probs=77.5
Q ss_pred cEEcChhhHHHHHcCCC-cEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------------------
Q 015527 58 VVSLNGKNFSEFMGKNR-NVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------- 115 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~-~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~------------------- 115 (405)
+.+.+++.++..-..++ +++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+++.
T Consensus 20 l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~ 99 (160)
T 1xvw_A 20 LRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLS 99 (160)
T ss_dssp EECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEE
T ss_pred eEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEe
Confidence 34444443332222465 9999998 99999999999999999999976 69999998863
Q ss_pred ----cHhHHHhCCCc----ccc--eEEEEe-CCeeeeeecCCC----CHHHHHHHHHh
Q 015527 116 ----EKDLAKEYNIL----AYP--TLYLFV-AGVRQFQFFGER----TRDVISAWVRE 158 (405)
Q Consensus 116 ----~~~~~~~~~i~----~~P--t~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~ 158 (405)
+..+++.|++. ++| ++++++ +|+++.++.|.. ..+++.+.|.+
T Consensus 100 d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 100 DFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp CTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred cCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 56789999999 999 888887 998888888865 34556555543
No 191
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.32 E-value=2.1e-12 Score=107.23 Aligned_cols=90 Identities=16% Similarity=0.242 Sum_probs=77.9
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------------------------cHhHHHhCC
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYN 124 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------------------------~~~~~~~~~ 124 (405)
.+++++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 5789999999 99999999999999999999976 68899998864 356888999
Q ss_pred Cc------ccceEEEEe-CCeeeeeecCCC----CHHHHHHHHHhhhc
Q 015527 125 IL------AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKMT 161 (405)
Q Consensus 125 i~------~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~~ 161 (405)
+. ++|++++++ +|+++.++.|.. +.+++.+.|+++..
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 99 999999997 998888888764 67888888887663
No 192
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.32 E-value=2.3e-10 Score=99.37 Aligned_cols=196 Identities=13% Similarity=0.120 Sum_probs=142.6
Q ss_pred CcEEcC-hhhHHHHHcC-CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEE
Q 015527 57 DVVSLN-GKNFSEFMGK-NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 57 ~~~~l~-~~~~~~~~~~-~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (405)
.+..++ .++++.++.. +++++|-|++++| ....+.|.++|+.+.+++.|+.+. ++++++++++.+ |++++|
T Consensus 7 ~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~---~~~v~~~~~v~~-p~ivlf 79 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTF---STEIAKFLKVSL-GKLVLM 79 (250)
T ss_dssp SSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEEC---CHHHHHHHTCCS-SEEEEE
T ss_pred CceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEEC---cHHHHHHcCCCC-CeEEEE
Confidence 466774 4888888877 8999999999985 567889999999998889999874 678999999987 999999
Q ss_pred eCC-------eeeeeec--CCCCHHHHHHHHHhhhcCCccccCChhHHHHHhccCCeEEEEEEcCC-C---Cc----cHH
Q 015527 135 VAG-------VRQFQFF--GERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDL-E---GM----ESE 197 (405)
Q Consensus 135 ~~g-------~~~~~~~--g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~-~---~~----~~~ 197 (405)
+.+ .....|. |..+.+.|.+||....-|-+.+++.. ....+.. ..+.++.|+... . .. ...
T Consensus 80 k~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~-n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~ 157 (250)
T 3ec3_A 80 QPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTS-NDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRN 157 (250)
T ss_dssp CCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTT-THHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHH
T ss_pred ecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCcc-chhhhhc-cCccEEEEEecccccccchhHHHHHH
Confidence 842 2446777 57899999999999998988888654 4444444 455555666422 1 11 345
Q ss_pred HHHHHh-ccCCcceEEEecCH---HHHhhcCCCCCCCCCeEEEeecCCCcccccc-CCCCHHHHHHHHhcc
Q 015527 198 ELAAAS-KLHSDVNFYQTTSA---DVAEFFHIHPKSKRPALIFLHLEAGKATPFR-HQFTRLAIANFVTHT 263 (405)
Q Consensus 198 ~~~~~a-~~~~~~~f~~~~~~---~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~-g~~~~~~l~~fi~~~ 263 (405)
.+..+| +++ ++.|+.+... ...+.||++.....|.++++.. ++..+.+. +.++.+.|.+|+...
T Consensus 158 ~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~-~~~ky~~~~~~~t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 158 KVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDE-SGKKFAMEPEEFDSDALREFVMAF 226 (250)
T ss_dssp HHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECT-TSCEEECCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcC-CCceecCCcccCCHHHHHHHHHHH
Confidence 577777 466 8999877433 4566788874211257776664 33455555 678999999999863
No 193
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.32 E-value=2.4e-12 Score=106.54 Aligned_cols=103 Identities=12% Similarity=0.014 Sum_probs=76.9
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------cH----hHHHhC-
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------EK----DLAKEY- 123 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------~~----~~~~~~- 123 (405)
.+.+++++.++..-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. .+ ..++++
T Consensus 31 ~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~ 110 (183)
T 2obi_A 31 SAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYN 110 (183)
T ss_dssp EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTT
T ss_pred EEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcC
Confidence 344455544432223679999999999999999999999999999987 69999998762 11 112222
Q ss_pred ------------------------------C-----CcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhh
Q 015527 124 ------------------------------N-----ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 124 ------------------------------~-----i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
+ |..+|++++++ +|+++.++.|..+.++|.++|++.
T Consensus 111 ~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 111 VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp CCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred CCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 3 23359999997 998999999998888888877654
No 194
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.31 E-value=8.4e-12 Score=98.82 Aligned_cols=89 Identities=10% Similarity=0.084 Sum_probs=73.7
Q ss_pred cCCCcEEEEEecCCChhHhhhHHHH---HHHHHHccCCcEEEEEeCcc--cHhHHHhCCCcccceEEEEe-C-Ceeeeee
Q 015527 71 GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYL--EKDLAKEYNILAYPTLYLFV-A-GVRQFQF 143 (405)
Q Consensus 71 ~~~~~~~v~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~-~-g~~~~~~ 143 (405)
.++++++|+||++||.+|+.+.... .++++.++.++.++.+|.+. ...+.+.|++.++|++++++ + |+.+..+
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~ 119 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEW 119 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEE
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeec
Confidence 5689999999999999999997654 55666665578999999865 34688999999999999998 5 7666666
Q ss_pred cCCCCHHHHHHHHHhhh
Q 015527 144 FGERTRDVISAWVREKM 160 (405)
Q Consensus 144 ~g~~~~~~l~~~i~~~~ 160 (405)
.| .+++++.++|++.+
T Consensus 120 ~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 120 HQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp SS-CCHHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHH
Confidence 66 89999999998876
No 195
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.31 E-value=6.2e-12 Score=109.91 Aligned_cols=83 Identities=19% Similarity=0.309 Sum_probs=65.5
Q ss_pred hHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc------ccHhHHHhCCCcccceEEEEeCCe
Q 015527 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------LEKDLAKEYNILAYPTLYLFVAGV 138 (405)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~------~~~~~~~~~~i~~~Pt~~~~~~g~ 138 (405)
.+.+.+.+. .+|+|||+||+||+++.|.|++++++++ .|||+ +++++|++++|+++||+++ +|+
T Consensus 191 ~la~~l~~~--~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~ 260 (291)
T 3kp9_A 191 GLAAHLRQI--GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR 260 (291)
T ss_dssp HHHHHHHHT--TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE
T ss_pred HHHHHhCCC--CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE
Confidence 344444333 3689999999999999999999987763 34444 3789999999999999554 885
Q ss_pred eeeeecCCCCHHHHHHHHHhhh
Q 015527 139 RQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 139 ~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++.|.++.+++.+|+....
T Consensus 261 ---~~~G~~~~~~L~~~l~~~~ 279 (291)
T 3kp9_A 261 ---TYTGVRSLEALAVASGYPL 279 (291)
T ss_dssp ---EEESCCCHHHHHHHTCCCC
T ss_pred ---EecCCCCHHHHHHHHCCCC
Confidence 3999999999999986544
No 196
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.31 E-value=2.5e-12 Score=106.17 Aligned_cols=106 Identities=17% Similarity=0.150 Sum_probs=80.3
Q ss_pred CCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------c----HhHHHh
Q 015527 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKE 122 (405)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~~~ 122 (405)
+..+.+++++.+...-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . ...+++
T Consensus 20 ~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~ 99 (180)
T 3kij_A 20 AFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARK 99 (180)
T ss_dssp GCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred ceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHH
Confidence 34455566655543334689999999999999999999999999999987 59999998763 2 234444
Q ss_pred -CCCc--------------------------ccce----EEEEe-CCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 123 -YNIL--------------------------AYPT----LYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 123 -~~i~--------------------------~~Pt----~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+++. ++|+ +++++ +|+++.++.|..+.+.+.+.|.+.+
T Consensus 100 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 100 NYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp HHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred hcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 4321 2677 77887 9999999999988888877777665
No 197
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.31 E-value=2.5e-12 Score=107.89 Aligned_cols=89 Identities=13% Similarity=0.247 Sum_probs=77.6
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------------cHhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (405)
.+++++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 5789999999 99999999999999999999876 68999998764 356889
Q ss_pred hCCCc-----ccceEEEEe-CCeeeeeecCCC----CHHHHHHHHHhhh
Q 015527 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (405)
Q Consensus 122 ~~~i~-----~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (405)
.|++. ++|++++++ +|+++.++.|.. +.+++.+.|.+..
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 999999997 998888888765 6788888888765
No 198
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.30 E-value=4.9e-12 Score=105.80 Aligned_cols=90 Identities=12% Similarity=0.181 Sum_probs=78.8
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------------------------cHhHHHhCC
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYN 124 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------------------------~~~~~~~~~ 124 (405)
.+++++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 5789999999 99999999999999999999987 69999998864 346788899
Q ss_pred Cc-----ccceEEEEe-CCeeeeeecCCC----CHHHHHHHHHhhhc
Q 015527 125 IL-----AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKMT 161 (405)
Q Consensus 125 i~-----~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~~ 161 (405)
+. ++|++++++ +|+++.++.|.. +.+++.+.|++...
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 99 999999997 998888888764 78999999988774
No 199
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.29 E-value=1.5e-12 Score=99.17 Aligned_cols=87 Identities=15% Similarity=0.222 Sum_probs=65.7
Q ss_pred hHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCccc-----HhHHHhCCCcccceEEEEeCCee
Q 015527 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-----KDLAKEYNILAYPTLYLFVAGVR 139 (405)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~-----~~~~~~~~i~~~Pt~~~~~~g~~ 139 (405)
.++..+. ++++++ ||++||++|+.+.|.++++... +.++.||.+.+ ..+++.|++.++|++ |.+|+.
T Consensus 12 ~~~~~~~-~~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~ 83 (116)
T 2e7p_A 12 KAKELAS-SAPVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQ 83 (116)
T ss_dssp HHHHHHT-SSSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred HHHHHHc-CCCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 3445554 456666 9999999999999999887543 45677776665 568999999999999 568988
Q ss_pred eeeecCCC---CHHHHHHHHHhh
Q 015527 140 QFQFFGER---TRDVISAWVREK 159 (405)
Q Consensus 140 ~~~~~g~~---~~~~l~~~i~~~ 159 (405)
+..+.|.. +.+.|.++|.+.
T Consensus 84 v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 84 IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp EECHHHHHHHHHTTCHHHHHHHT
T ss_pred ECChHHHHHHHhCChHHHHHHHc
Confidence 87777654 566777777654
No 200
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.29 E-value=3.4e-12 Score=105.76 Aligned_cols=103 Identities=12% Similarity=-0.014 Sum_probs=76.4
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-------c----HhHHHhCC
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKEYN 124 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~~~~~ 124 (405)
.+.+++++.++..-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . .+.+++++
T Consensus 33 ~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~ 112 (185)
T 2gs3_A 33 SAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYN 112 (185)
T ss_dssp EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTT
T ss_pred eeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcC
Confidence 344445444432223679999999999999999999999999999987 69999998763 1 22333332
Q ss_pred C------------------------------------cccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhh
Q 015527 125 I------------------------------------LAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 125 i------------------------------------~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
+ ..+|++++++ +|+++.++.|..+.++|.+.|++.
T Consensus 113 ~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 113 VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp CCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred CCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 2 2258999997 998999999988888887777654
No 201
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.24 E-value=2.4e-11 Score=101.70 Aligned_cols=89 Identities=20% Similarity=0.360 Sum_probs=76.0
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------------cHhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (405)
.+++++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 5789999999 99999999999999999999976 69999998864 236788
Q ss_pred hCCCc------ccceEEEEe-CCeeeeeecCC----CCHHHHHHHHHhhh
Q 015527 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (405)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (405)
.|++. ++|++++++ +|++...+.|. .+.+++.+.|....
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 99998 899999997 89888887774 46788888887664
No 202
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.22 E-value=2.4e-11 Score=89.40 Aligned_cols=79 Identities=13% Similarity=0.137 Sum_probs=65.9
Q ss_pred CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc--ccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHH
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRD 150 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~ 150 (405)
..+.++.||++||++|+.+.+.++++++ ++.|..||++ ++++++++|| .++|++ +.+|+.. ..|..+.+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~--~~~g~~~~ 85 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL--MMHRVNTS 85 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE--EESSCCHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE--EecCCCHH
Confidence 4678999999999999999999887643 4889999998 7899999999 999986 4577553 45668999
Q ss_pred HHHHHHHhhh
Q 015527 151 VISAWVREKM 160 (405)
Q Consensus 151 ~l~~~i~~~~ 160 (405)
.|.++|.+.+
T Consensus 86 ~l~~~l~~~~ 95 (100)
T 1wjk_A 86 KLEKQLRKLS 95 (100)
T ss_dssp HHHHHHHSSS
T ss_pred HHHHHHHHHH
Confidence 9999998765
No 203
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.22 E-value=4.9e-11 Score=96.99 Aligned_cols=104 Identities=10% Similarity=0.104 Sum_probs=79.2
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCC-ChhHhhhHHHHHHHHHHccCCcEEEEEeCcc-------------------
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANW-CYWSKKLAPEFAAAAKMLKGEADLVMVDAYL------------------- 115 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~-C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~------------------- 115 (405)
..+.+.+++.++..-..+++++|.||++| |++|+.+.|.+.++++++ .++.++.|+.+.
T Consensus 27 f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~ 105 (167)
T 2jsy_A 27 FTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETL 105 (167)
T ss_dssp CEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEE
T ss_pred eEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEe
Confidence 34455555544322235789999999999 999999999999999999 678888888753
Q ss_pred ----cHhHHHhCCCcc------cceEEEEe-CCeeeeeecCC-----CCHHHHHHHHHhhh
Q 015527 116 ----EKDLAKEYNILA------YPTLYLFV-AGVRQFQFFGE-----RTRDVISAWVREKM 160 (405)
Q Consensus 116 ----~~~~~~~~~i~~------~Pt~~~~~-~g~~~~~~~g~-----~~~~~l~~~i~~~~ 160 (405)
+..+++.|++.. .|++++++ +|++..++.|. .+.+++.+.|++.+
T Consensus 106 ~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 106 SDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp EGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred eCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 346788899987 49999998 89888888653 24577877777654
No 204
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.22 E-value=2.5e-11 Score=101.83 Aligned_cols=106 Identities=13% Similarity=0.095 Sum_probs=78.7
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChh-HhhhHHHHHHHHHHcc----CCcEEEEEeCcc---------------
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLK----GEADLVMVDAYL--------------- 115 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~~-C~~~~~~~~~~~~~~~----~~v~~~~v~~~~--------------- 115 (405)
..+.+.+++.++..-..+++++|+||++||++ |..++|.+.+++++++ +++.++.|+++.
T Consensus 24 f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~ 103 (200)
T 2b7k_A 24 FHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDF 103 (200)
T ss_dssp CEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTS
T ss_pred EEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHc
Confidence 34555555554432236799999999999997 9999999999888775 378888888763
Q ss_pred -------------cHhHHHhCCCc-ccc---------------eEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 116 -------------EKDLAKEYNIL-AYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 116 -------------~~~~~~~~~i~-~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
...+++.|||. +.| ++++++ +|+++..+.|..+.+.+.+.|.+.+.
T Consensus 104 ~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 104 HPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp CTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred CCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 13467888887 444 778887 99888899998888888888877764
No 205
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.21 E-value=6.7e-11 Score=99.79 Aligned_cols=106 Identities=13% Similarity=0.076 Sum_probs=80.6
Q ss_pred CCCcEEcC-hhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc-----------HhHHH
Q 015527 55 AKDVVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----------KDLAK 121 (405)
Q Consensus 55 ~~~~~~l~-~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~-----------~~~~~ 121 (405)
+..+.+++ ++.++..-..++++||+|||+||++|+ ++|.+++++++|++ ++.++.|+|++. .+.++
T Consensus 37 dF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~ 115 (215)
T 2i3y_A 37 DYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK 115 (215)
T ss_dssp GCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred CcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHHHH
Confidence 34455565 555443334689999999999999999 89999999999976 799999987521 23455
Q ss_pred ------hCCCc-------------------------------------------------ccceEEEEe-CCeeeeeecC
Q 015527 122 ------EYNIL-------------------------------------------------AYPTLYLFV-AGVRQFQFFG 145 (405)
Q Consensus 122 ------~~~i~-------------------------------------------------~~Pt~~~~~-~g~~~~~~~g 145 (405)
++++. ..|+.++++ +|+++.+|.|
T Consensus 116 ~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g 195 (215)
T 2i3y_A 116 YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSH 195 (215)
T ss_dssp HTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECT
T ss_pred hccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCC
Confidence 55431 016889997 9999999999
Q ss_pred CCCHHHHHHHHHhhhc
Q 015527 146 ERTRDVISAWVREKMT 161 (405)
Q Consensus 146 ~~~~~~l~~~i~~~~~ 161 (405)
..+.++|.+.|.+++.
T Consensus 196 ~~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 196 RATVSSVKTDILAYLK 211 (215)
T ss_dssp TSCHHHHHHHHHHHGG
T ss_pred CCCHHHHHHHHHHHHH
Confidence 9999999999988774
No 206
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.20 E-value=5.4e-10 Score=96.61 Aligned_cols=143 Identities=12% Similarity=0.118 Sum_probs=98.0
Q ss_pred CCCcEEEEEe-cCCChhHh-hhHHHHHHHHHHccC-Cc-EEEEEeCcc----------------------cHhHHHhCCC
Q 015527 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKMLKG-EA-DLVMVDAYL----------------------EKDLAKEYNI 125 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~-~~~~~~~~~~~~~~~-~v-~~~~v~~~~----------------------~~~~~~~~~i 125 (405)
.+++++|+|| ++||++|. .++|.+.++++++++ ++ .++.|+.+. +..+++.||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 5789999999 99999999 999999999999875 78 888888653 2346777887
Q ss_pred c-----------ccceEEEEeCCeeeeeecCC---------CCHHHHHHHHHhhhcCCccccCChhHHHHHhccCCeEEE
Q 015527 126 L-----------AYPTLYLFVAGVRQFQFFGE---------RTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVL 185 (405)
Q Consensus 126 ~-----------~~Pt~~~~~~g~~~~~~~g~---------~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~l~~~~~~~v 185 (405)
. +.|+++++++|++...+.|. .+.+++.+.+.... + ....++
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~------i------------~~~~i~ 173 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH------Q------------VQESIS 173 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS------C------------CCCCEE
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc------c------------ccceEE
Confidence 5 35888877999888877764 34555555443211 0 122366
Q ss_pred EEEcCCCCccHHHHHHHhccCCcceEEEecC----HHHHhhcCCCCCCCCCeEE
Q 015527 186 GFLHDLEGMESEELAAASKLHSDVNFYQTTS----ADVAEFFHIHPKSKRPALI 235 (405)
Q Consensus 186 ~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~----~~l~~~~~~~~~~~~p~i~ 235 (405)
+|..++|..+.+.-..+....-.+...-+.. .++.+.++.. ..|.+.
T Consensus 174 ly~~~~Cp~C~~a~~~L~~~~i~~~~~~i~~~~~~~~l~~~~g~~---~vP~~~ 224 (241)
T 1nm3_A 174 IFTKPGCPFCAKAKQLLHDKGLSFEEIILGHDATIVSVRAVSGRT---TVPQVF 224 (241)
T ss_dssp EEECSSCHHHHHHHHHHHHHTCCCEEEETTTTCCHHHHHHHTCCS---SSCEEE
T ss_pred EEECCCChHHHHHHHHHHHcCCceEEEECCCchHHHHHHHHhCCC---CcCEEE
Confidence 7888999888777666554433444333322 3456666654 478875
No 207
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.19 E-value=3.7e-11 Score=101.02 Aligned_cols=89 Identities=17% Similarity=0.268 Sum_probs=76.0
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------------cHhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (405)
.+++++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 5789999999 99999999999999999999976 69999998864 346788
Q ss_pred hCCCc------ccceEEEEe-CCeeeeeecCC----CCHHHHHHHHHhhh
Q 015527 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (405)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (405)
.|++. ++|++++++ +|++..++.|. .+.+++.+.|+.+.
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 99999 999999997 89888877664 45688888887665
No 208
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.19 E-value=3.6e-11 Score=100.23 Aligned_cols=89 Identities=20% Similarity=0.320 Sum_probs=74.9
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------------cHhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (405)
.+++++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 5789999999 99999999999999999999964 68888888763 246888
Q ss_pred hCCCc-----ccceEEEEe-CCeeeeeecCC----CCHHHHHHHHHhhh
Q 015527 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (405)
Q Consensus 122 ~~~i~-----~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (405)
.|++. .+|++++++ +|++...+.|. .+.+++.+.|..+.
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99999 899999997 99888887774 35778888777654
No 209
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.19 E-value=5e-11 Score=100.87 Aligned_cols=89 Identities=18% Similarity=0.313 Sum_probs=75.1
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------------cHhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (405)
.+++++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 6789999999 99999999999999999999964 78888887753 345788
Q ss_pred hCCCc-----ccceEEEEe-CCeeeeeecCC----CCHHHHHHHHHhhh
Q 015527 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (405)
Q Consensus 122 ~~~i~-----~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (405)
.|++. .+|++++++ +|+++..+.|. .+.+++.+.|+...
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 899999998 89888877664 35888888887654
No 210
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.18 E-value=1.2e-10 Score=112.22 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=82.3
Q ss_pred EEcChhhHHHHHc-CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCC
Q 015527 59 VSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (405)
Q Consensus 59 ~~l~~~~~~~~~~-~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (405)
..++++.++.... .++..++.||++||++|+.+.|.+++++..+. ++.+..||.+++++++++|+|.++|++++ +|
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g 178 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGVPAVFV--NG 178 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TT
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCccCEEEE--CC
Confidence 4566676666653 35677999999999999999999999999987 79999999999999999999999999977 88
Q ss_pred eeeeeecCCCCHHHHHHHHHhh
Q 015527 138 VRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
+.+.. |..+.++|.+|+.+.
T Consensus 179 ~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 179 KEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEE--SCCCHHHHHHHHCCS
T ss_pred EEEec--CCCCHHHHHHHHhhc
Confidence 66544 999999999998764
No 211
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.17 E-value=7.8e-11 Score=96.46 Aligned_cols=104 Identities=18% Similarity=0.172 Sum_probs=77.4
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCCh-hHhhhHHHHHHHHHHccC---CcEEEEEeCcc---cH-------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLKG---EADLVMVDAYL---EK------------- 117 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~C~-~C~~~~~~~~~~~~~~~~---~v~~~~v~~~~---~~------------- 117 (405)
+.+++++.++..-..+++++|.||++||+ +|....|.+.++++++++ ++.++.|+++. .+
T Consensus 18 l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~ 97 (174)
T 1xzo_A 18 FQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLS 97 (174)
T ss_dssp EECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCC
T ss_pred EEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 34444443332223679999999999999 999999999999999875 39999998862 11
Q ss_pred ------------hHHHh----------------CCCcccceEEEEe-CCeeeeeecCCC--CHHHHHHHHHhhhc
Q 015527 118 ------------DLAKE----------------YNILAYPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (405)
Q Consensus 118 ------------~~~~~----------------~~i~~~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (405)
.+.+. +++...|++++++ +|+++.++.|.. +.+++.+.|++++.
T Consensus 98 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 98 FDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp GGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred CcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 11222 2356789999997 998889999876 58899999987763
No 212
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.17 E-value=1.8e-11 Score=86.19 Aligned_cols=63 Identities=17% Similarity=0.183 Sum_probs=51.5
Q ss_pred EEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc-ccHhHHHhCCCcccceEEEEeCCeee
Q 015527 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTLYLFVAGVRQ 140 (405)
Q Consensus 76 ~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~-~~~~~~~~~~i~~~Pt~~~~~~g~~~ 140 (405)
.++.||++||++|+.+.|.++++.++++..+.++.||.+ ++.+++++||+.++|++++ +|+..
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~ 66 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF 66 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE
Confidence 367899999999999999999988776545666666655 5788899999999999877 88543
No 213
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.15 E-value=8.6e-11 Score=95.13 Aligned_cols=102 Identities=12% Similarity=0.166 Sum_probs=75.3
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEec-CCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc--------------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------- 115 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a-~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------------------- 115 (405)
+...+++.++..-..+++++|.||+ +||++|...+|.+.++.+++++ ++.++.|.++.
T Consensus 20 l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d 99 (163)
T 3gkn_A 20 LSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSD 99 (163)
T ss_dssp EECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEEC
T ss_pred ccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEEC
Confidence 3344444443222357899999998 9999999999999999999976 68888888763
Q ss_pred -cHhHHHhCCCcc------------cceEEEEe-CCeeeeeecCCCC---HHHHHHHHHhh
Q 015527 116 -EKDLAKEYNILA------------YPTLYLFV-AGVRQFQFFGERT---RDVISAWVREK 159 (405)
Q Consensus 116 -~~~~~~~~~i~~------------~Pt~~~~~-~g~~~~~~~g~~~---~~~l~~~i~~~ 159 (405)
+..+++.|++.. .|++++++ +|++...+.|... .+++.+.+++.
T Consensus 100 ~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 100 GDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp TTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred CcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 235678889877 99999998 8988877765433 35555555543
No 214
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.14 E-value=1.4e-10 Score=98.61 Aligned_cols=89 Identities=18% Similarity=0.354 Sum_probs=75.7
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------------cHhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (405)
.+++++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 5699999999 99999999999999999999975 78899988763 346888
Q ss_pred hCCCc------ccceEEEEe-CCeeeeeecCC----CCHHHHHHHHHhhh
Q 015527 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (405)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (405)
.|++. .+|++++++ +|+++..+.|. .+.+++.+.|+.+.
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 99999 999999997 89888777664 56688888887665
No 215
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.14 E-value=1.4e-10 Score=98.85 Aligned_cols=87 Identities=13% Similarity=0.361 Sum_probs=72.1
Q ss_pred CCCcEEEEEec-CCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------------cHhHHH
Q 015527 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~a-~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (405)
.+++++|.||+ +||++|+.++|.+.++++++++ ++.++.|+++. +..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 67899999997 9999999999999999999986 69999998864 235778
Q ss_pred hCCCc------ccceEEEEe-CCeeeeeecCC----CCHHHHHHHHHh
Q 015527 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVRE 158 (405)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~ 158 (405)
.|++. ++|++++++ +|+++..+.|. ...+++.+.|..
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 89998 899999998 99888888765 345666666654
No 216
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.13 E-value=1.5e-10 Score=97.14 Aligned_cols=104 Identities=10% Similarity=-0.018 Sum_probs=77.7
Q ss_pred CcEEcC-hhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc-----------HhHHH--
Q 015527 57 DVVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----------KDLAK-- 121 (405)
Q Consensus 57 ~~~~l~-~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~-----------~~~~~-- 121 (405)
.+.+++ ++.++..-..++++||+|||+||++| .++|.+++++++|++ ++.++.|++++. ...++
T Consensus 21 ~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~ 99 (207)
T 2r37_A 21 GALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYV 99 (207)
T ss_dssp EEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHHHHT
T ss_pred EeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHHHHHHHHhc
Confidence 344444 44443222368999999999999999 789999999999976 699999987521 23444
Q ss_pred ----hCCCc-------------------------------------------------ccceEEEEe-CCeeeeeecCCC
Q 015527 122 ----EYNIL-------------------------------------------------AYPTLYLFV-AGVRQFQFFGER 147 (405)
Q Consensus 122 ----~~~i~-------------------------------------------------~~Pt~~~~~-~g~~~~~~~g~~ 147 (405)
++++. ..|+.++++ +|+++.++.|..
T Consensus 100 ~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~ 179 (207)
T 2r37_A 100 RPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRT 179 (207)
T ss_dssp SSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTS
T ss_pred chhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCC
Confidence 55431 016889997 999999999999
Q ss_pred CHHHHHHHHHhhhc
Q 015527 148 TRDVISAWVREKMT 161 (405)
Q Consensus 148 ~~~~l~~~i~~~~~ 161 (405)
+.+++.+.|.+.+.
T Consensus 180 ~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 180 TVSNVKMDILSYMR 193 (207)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999998888763
No 217
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.12 E-value=8.3e-11 Score=96.40 Aligned_cols=86 Identities=10% Similarity=0.107 Sum_probs=66.9
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCC-ChhHhhhHHHHHHHHHHccCCcEEEEEeCcc---------------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYANW-CYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--------------------- 115 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~~-C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~--------------------- 115 (405)
+.+.+++.+...-..+++++|.||++| |++|+.++|.+.+++++ .++.++.|+.+.
T Consensus 29 l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D 106 (175)
T 1xvq_A 29 LTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASA 106 (175)
T ss_dssp EECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEEC
T ss_pred EECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeC
Confidence 444444433322225789999999999 99999999999999988 578888888762
Q ss_pred -cHhHHHhCCCccc---------ceEEEEe-CCeeeeeecC
Q 015527 116 -EKDLAKEYNILAY---------PTLYLFV-AGVRQFQFFG 145 (405)
Q Consensus 116 -~~~~~~~~~i~~~---------Pt~~~~~-~g~~~~~~~g 145 (405)
+..+++.|++... |++++++ +|+++..+.|
T Consensus 107 ~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 107 FRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp TTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEEC
T ss_pred CHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEEC
Confidence 3467889999887 8999997 9988888863
No 218
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.12 E-value=2.2e-10 Score=81.63 Aligned_cols=76 Identities=21% Similarity=0.295 Sum_probs=61.6
Q ss_pred EEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccH----hHHHhCC--CcccceEEEEeCCeeeeeecCCCCH
Q 015527 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK----DLAKEYN--ILAYPTLYLFVAGVRQFQFFGERTR 149 (405)
Q Consensus 76 ~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~----~~~~~~~--i~~~Pt~~~~~~g~~~~~~~g~~~~ 149 (405)
-++.|+++||++|+.+.+.+++++++++ ++.+..+|+++++ ++.+.++ +.++|++ |.+|+.+. | .
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~---~---~ 72 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD-DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG---G---Y 72 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS-SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE---S---S
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC-CceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE---C---H
Confidence 3678999999999999999999998866 5999999988764 7899999 9999998 44785543 2 2
Q ss_pred HHHHHHHHhhh
Q 015527 150 DVISAWVREKM 160 (405)
Q Consensus 150 ~~l~~~i~~~~ 160 (405)
++|.+++.+.+
T Consensus 73 ~~l~~~~~~~~ 83 (85)
T 1ego_A 73 TDFAAWVKENL 83 (85)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 67888877654
No 219
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.12 E-value=5e-11 Score=95.76 Aligned_cols=101 Identities=18% Similarity=0.250 Sum_probs=68.1
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc--------------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------- 115 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~-------------------- 115 (405)
+.+.+++.++..-..+++++|.|| ++||++|..++|.+.++++++++ ++.++.|+.+.
T Consensus 15 l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D 94 (157)
T 4g2e_A 15 LPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSD 94 (157)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEEC
T ss_pred eECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEc
Confidence 344444444322236789999999 99999999999999999998876 78888887653
Q ss_pred -cHhHHHhCCCc-----------ccceEEEEe-CCeeeeeec-----CCCCHHHHHHHHHh
Q 015527 116 -EKDLAKEYNIL-----------AYPTLYLFV-AGVRQFQFF-----GERTRDVISAWVRE 158 (405)
Q Consensus 116 -~~~~~~~~~i~-----------~~Pt~~~~~-~g~~~~~~~-----g~~~~~~l~~~i~~ 158 (405)
+.++++.||+. ..|++++++ +|++...+. +..+.+++.+.|+.
T Consensus 95 ~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 95 YNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp TTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred CCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 33567788874 468899997 898776654 34567778777754
No 220
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.06 E-value=3.6e-10 Score=95.94 Aligned_cols=89 Identities=19% Similarity=0.344 Sum_probs=72.4
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc----------------------------HhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~ 121 (405)
.+++++|+|| ++||++|..++|.+.++++++++ ++.++.|+++.. ..+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 6789999999 99999999999999999999864 688888876431 24567
Q ss_pred hCCC-----cccceEEEEe-CCeeeeeecCC----CCHHHHHHHHHhhh
Q 015527 122 EYNI-----LAYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (405)
Q Consensus 122 ~~~i-----~~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (405)
.|++ ...|++++++ +|+++..+.|. .+.+++.+.|+++.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 7888 3789999998 89888877663 56788888887664
No 221
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.05 E-value=1.3e-10 Score=94.04 Aligned_cols=105 Identities=14% Similarity=0.259 Sum_probs=79.1
Q ss_pred CcEEcChhh--HHHHHcCCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc-----------------
Q 015527 57 DVVSLNGKN--FSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------- 115 (405)
Q Consensus 57 ~~~~l~~~~--~~~~~~~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------- 115 (405)
.+.+.+++. +.+...+++++++.|| ++||++|..++|.+.++++++++ ++.++.|+.+.
T Consensus 15 ~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~ 94 (164)
T 4gqc_A 15 TLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNL 94 (164)
T ss_dssp EEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEE
T ss_pred EeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccce
Confidence 344455543 3455667899999988 99999999999999999999876 68888887653
Q ss_pred ----cHhHHHhCCCc----------ccceEEEEe-CCeeeeeecC-----CCCHHHHHHHHHhhhc
Q 015527 116 ----EKDLAKEYNIL----------AYPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVREKMT 161 (405)
Q Consensus 116 ----~~~~~~~~~i~----------~~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~~~~ 161 (405)
+.++++.||+. ..|++++++ +|++...+.+ ..+.+++.+.+++..+
T Consensus 95 l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 95 LSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp EECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred eecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 34567888874 478999998 9987766543 3467888888877654
No 222
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.04 E-value=1.1e-09 Score=90.67 Aligned_cols=89 Identities=13% Similarity=0.185 Sum_probs=71.6
Q ss_pred CCCcEEEEEec-CCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc-------------------------HhHHHhCC
Q 015527 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-------------------------KDLAKEYN 124 (405)
Q Consensus 72 ~~~~~~v~f~a-~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~-------------------------~~~~~~~~ 124 (405)
.+++++|.||+ +||++|..++|.+.++++++++ ++.++.|.++.. ..+++.|+
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 57899999995 9999999999999999999875 688888876532 23556677
Q ss_pred Cc------ccceEEEEe-CCeeeeeecCCC----CHHHHHHHHHhhh
Q 015527 125 IL------AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (405)
Q Consensus 125 i~------~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (405)
+. ..|++++++ +|++...+.|.. +.+++.+.|+++.
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 76 379999998 998888887653 5888888887665
No 223
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.03 E-value=7.4e-10 Score=91.01 Aligned_cols=106 Identities=10% Similarity=0.043 Sum_probs=78.7
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------- 115 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~---------------- 115 (405)
+...+.+.+++.++..-..+++++|.|| ++||++|...+|.+.++++++++ ++.++.|.++.
T Consensus 32 P~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~ 111 (179)
T 3ixr_A 32 LNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFP 111 (179)
T ss_dssp HHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSC
T ss_pred CCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceE
Confidence 3455666777665533346789999998 99999999999999999999977 68888887753
Q ss_pred -----cHhHHHhCCCcc------------cceEEEEe-CCeeeeeecCC---CCHHHHHHHHHhh
Q 015527 116 -----EKDLAKEYNILA------------YPTLYLFV-AGVRQFQFFGE---RTRDVISAWVREK 159 (405)
Q Consensus 116 -----~~~~~~~~~i~~------------~Pt~~~~~-~g~~~~~~~g~---~~~~~l~~~i~~~ 159 (405)
+..+++.|++.. .|++++++ +|+++..+.|. ...+++.+.|++.
T Consensus 112 ~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 112 LVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred EEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 235677888854 58899998 99888777653 3345566655543
No 224
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.03 E-value=1.1e-09 Score=89.17 Aligned_cols=106 Identities=8% Similarity=-0.023 Sum_probs=78.7
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCCh-hHhhhHHHHHHHHHHcc---CCcEEEEEeCcc-----------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLK---GEADLVMVDAYL----------------- 115 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~-~C~~~~~~~~~~~~~~~---~~v~~~~v~~~~----------------- 115 (405)
.+.+.+++.++..-..+++++|+||++||+ .|..++|.+.++.++++ .++.++.|.++.
T Consensus 12 ~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~ 91 (170)
T 3me7_A 12 TLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGID 91 (170)
T ss_dssp EEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCC
T ss_pred EEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 444555544442223589999999999997 69999999999999985 368888877651
Q ss_pred --------------cHhHHHhCC---------CcccceEEEEe-CCeeeeeecCC-CCHHHHHHHHHhhhcC
Q 015527 116 --------------EKDLAKEYN---------ILAYPTLYLFV-AGVRQFQFFGE-RTRDVISAWVREKMTL 162 (405)
Q Consensus 116 --------------~~~~~~~~~---------i~~~Pt~~~~~-~g~~~~~~~g~-~~~~~l~~~i~~~~~~ 162 (405)
...+++.|| +...|++++++ +|++...+.|. .+.+++.+.|.+....
T Consensus 92 ~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 92 GKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp SSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTC
T ss_pred CCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 123555555 34568899998 99888888885 7899999999888753
No 225
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.01 E-value=1.3e-09 Score=88.18 Aligned_cols=100 Identities=8% Similarity=0.064 Sum_probs=72.2
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEec-CCChhHhhhHHHHHHHHHHccCCcEEEEEeCcc---------------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--------------------- 115 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a-~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~--------------------- 115 (405)
+.+.+++.++..-..+++++|+||+ +||++|..++|.+.++++++ .++.++.|+++.
T Consensus 27 l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D 105 (163)
T 1psq_A 27 LTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSD 105 (163)
T ss_dssp EECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEEC
T ss_pred EEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecC
Confidence 3444444433222367899999995 99999999999999999988 678888877642
Q ss_pred --cHhHHHhCCCc----c--cceEEEEe-CCeeeeeecCC-----CCHHHHHHHHHh
Q 015527 116 --EKDLAKEYNIL----A--YPTLYLFV-AGVRQFQFFGE-----RTRDVISAWVRE 158 (405)
Q Consensus 116 --~~~~~~~~~i~----~--~Pt~~~~~-~g~~~~~~~g~-----~~~~~l~~~i~~ 158 (405)
+..+++.|++. + .|++++++ +|++...+.|. .+.+++.+.|++
T Consensus 106 ~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 106 YFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp TTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred CchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 23466677776 3 39999998 89888888653 344677776653
No 226
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.01 E-value=7.2e-10 Score=89.24 Aligned_cols=76 Identities=18% Similarity=0.168 Sum_probs=61.0
Q ss_pred CCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc---------------------cHhHHHhCCCcccc
Q 015527 73 NRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------EKDLAKEYNILAYP 129 (405)
Q Consensus 73 ~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~---------------------~~~~~~~~~i~~~P 129 (405)
+++++|+|| ++||++|..++|.+.++++++++ + .++.|+++. +..+++.|++...|
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 347899987 99999999999999999999976 5 777777643 34577889999998
Q ss_pred -------eEEEEeCCeeeeeecCCCCHH
Q 015527 130 -------TLYLFVAGVRQFQFFGERTRD 150 (405)
Q Consensus 130 -------t~~~~~~g~~~~~~~g~~~~~ 150 (405)
++++ .+|++...+.|.....
T Consensus 114 ~~g~~~~~~li-~~G~i~~~~~g~~~~~ 140 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKFKRVKISPEV 140 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEEEEESCCHHH
T ss_pred cCCccceEEEE-cCCEEEEEEccCCccc
Confidence 5555 9998888888875543
No 227
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.99 E-value=8.7e-10 Score=93.43 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=63.2
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEe---------------------------------------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD--------------------------------------- 112 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~--------------------------------------- 112 (405)
+++++++.||++||++|++++|.+.++.+. ++.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 357899999999999999999999998763 34443221
Q ss_pred -C----cccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 113 -A----YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 113 -~----~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
| +.+..+++++||.++||+ ++.+|. .+.|..+.+.|.++|.+..
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAV-VLSNGT---LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC---EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEE-EEcCCe---EecCCCCHHHHHHHHHHhh
Confidence 1 234567889999999998 556773 5679999999999987654
No 228
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.98 E-value=2.4e-09 Score=87.66 Aligned_cols=84 Identities=13% Similarity=0.149 Sum_probs=66.8
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC--------------------------------------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~-------------------------------------- 113 (405)
+++++++.||.+||++|+.+.|.+.++.+++++ +.+...+.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 467899999999999999999999999998775 44444331
Q ss_pred -------------------------------cccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 114 -------------------------------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 114 -------------------------------~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
..+..+++++||.++||+++ +|+ .+.|..+.+.+.+.|.+.+.
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~---~~~G~~~~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA---LVPGFVEQSQLQDAVDRARK 173 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE---EECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE---EeeCCCCHHHHHHHHHHHHh
Confidence 22334677899999999886 773 66799999999999987653
No 229
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.98 E-value=2.9e-08 Score=85.82 Aligned_cols=195 Identities=14% Similarity=0.087 Sum_probs=128.3
Q ss_pred CCccccCChhHHHHH-hccCCeEEEEEEcCCCCccH---HHHHHHh-ccCC---cceEEEec-----CHHHHhhcCCCCC
Q 015527 162 LGTYSITTTDEAERI-LTVESKLVLGFLHDLEGMES---EELAAAS-KLHS---DVNFYQTT-----SADVAEFFHIHPK 228 (405)
Q Consensus 162 ~~~~~i~~~~~~~~~-l~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~---~~~f~~~~-----~~~l~~~~~~~~~ 228 (405)
.++..+++ ++++.. .+.++.++|.|+++||.++. +.+..++ .+.+ .+.|+.+. +.+++++|++..
T Consensus 12 ~~v~~l~~-~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~- 89 (244)
T 3q6o_A 12 DPLTLLQA-DTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG- 89 (244)
T ss_dssp SSSEEECT-TTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS-
T ss_pred CCceeCCh-hhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc-
Confidence 34566654 555554 45568999999999999854 4566666 3443 68887764 567999999984
Q ss_pred CCCCeEEEeecCC----CccccccCCCCHHHHHHHHhcc----C------CCCccccccccccccccCCc--cEEEEEec
Q 015527 229 SKRPALIFLHLEA----GKATPFRHQFTRLAIANFVTHT----K------HPLVVTLTIHNAQFVFQDPR--KQLWLFAP 292 (405)
Q Consensus 229 ~~~p~i~~~~~~~----~~~~~y~g~~~~~~l~~fi~~~----~------~p~v~~l~~~~~~~~~~~~~--~~~i~f~~ 292 (405)
+|++++|+.+. +....+.| .+.+.|.+||... . .|.+...+..++..++.... +.+++|.+
T Consensus 90 --~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~ 166 (244)
T 3q6o_A 90 --FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEX 166 (244)
T ss_dssp --SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEEC
T ss_pred --cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEE
Confidence 99999999643 22335666 5788888887642 2 12334445566666654332 66677776
Q ss_pred CCCcHHHHHHHHHHHHHhc--CcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCC-CCCHHHHHHHH
Q 015527 293 AYGSDKVILTFEEVAKALK--GKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNG-ELTLSSIKSFG 369 (405)
Q Consensus 293 ~~~~~~~~~~~~~va~~~~--~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~-~~~~~~l~~Fi 369 (405)
... ....+++..+. ..+.+..++..+ ..+++.||++. .|.+++++.+|+...++. .-+.+.+..++
T Consensus 167 ~~~-----~~~~~~~~d~~~~~~i~v~~~~~~~----~~l~~~f~v~~--~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l 235 (244)
T 3q6o_A 167 GGS-----YLAREVALDLSQHKGVAVRRVLNTE----ANVVRKFGVTD--FPSCYLLFRNGSVSRVPVLMESRSFYTAYL 235 (244)
T ss_dssp TTC-----CHHHHHHHHTTTCTTEEEEEEETTC----HHHHHHHTCCC--SSEEEEEETTSCEEECCCSSSSHHHHHHHH
T ss_pred CCc-----chHHHHHHHhccCCceEEEEEeCch----HHHHHHcCCCC--CCeEEEEeCCCCeEeeccccccHHHHHHHH
Confidence 542 13556666776 558888887653 37889999986 689988887666555543 34445566666
Q ss_pred HHH
Q 015527 370 EEF 372 (405)
Q Consensus 370 ~~~ 372 (405)
+.+
T Consensus 236 ~~~ 238 (244)
T 3q6o_A 236 QRL 238 (244)
T ss_dssp HTC
T ss_pred HhC
Confidence 544
No 230
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.96 E-value=3e-09 Score=89.70 Aligned_cols=89 Identities=12% Similarity=0.308 Sum_probs=72.4
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc----------------------------HhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~ 121 (405)
.+++++|+|| ++||++|..++|.+.++++++++ ++.++.|+++.. ..+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 5789999999 99999999999999999999976 788888876431 24567
Q ss_pred hCCCc------ccceEEEEe-CCeeeeeecCC----CCHHHHHHHHHhhh
Q 015527 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (405)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (405)
.|++. .+|++++++ +|+++..+.|. .+.+++.+.|..+.
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 78884 699999998 89888777653 46788888887654
No 231
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.94 E-value=1.1e-09 Score=89.30 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=72.1
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcc---------------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--------------------- 115 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~--------------------- 115 (405)
+.+.+++.++..-..+++++|.|| ++||++|..+.|.+.++++++ .++.++.|.++.
T Consensus 32 l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D 110 (171)
T 2yzh_A 32 VVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNVTVASD 110 (171)
T ss_dssp EEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEEC
T ss_pred EECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCeEEeec
Confidence 344444433321125789999999 899999999999999999988 678888877643
Q ss_pred --cHhHHHhCCCc---------ccceEEEEe-CCeeeeeecC-----CCCHHHHHHHHHhh
Q 015527 116 --EKDLAKEYNIL---------AYPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVREK 159 (405)
Q Consensus 116 --~~~~~~~~~i~---------~~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~~ 159 (405)
+..+ +.|++. ..|++++++ +|++...+.| ..+.+++.+.|+++
T Consensus 111 ~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 111 FRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp TTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred CccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 2345 666664 269999998 9988888764 34567787777654
No 232
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.94 E-value=2e-09 Score=87.24 Aligned_cols=101 Identities=9% Similarity=0.046 Sum_probs=72.7
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcc-------------------
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL------------------- 115 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~------------------- 115 (405)
..+.+++++.++..-..+++++|.|| +.||++|...+|.+.+++++ .++.++.|+.+.
T Consensus 29 f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l 106 (166)
T 3p7x_A 29 FTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITL 106 (166)
T ss_dssp CEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEE
T ss_pred eEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEc
Confidence 34445555444322236789999999 78999999999999999887 467888777642
Q ss_pred ----cHhHHHhCCCcc------cceEEEEe-CCeeeeeecC-----CCCHHHHHHHHHh
Q 015527 116 ----EKDLAKEYNILA------YPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVRE 158 (405)
Q Consensus 116 ----~~~~~~~~~i~~------~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~ 158 (405)
+..+++.|++.. .|++++++ +|+++..+.+ ..+.+++.+.|++
T Consensus 107 ~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 107 SDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp ECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred cCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 235667788875 89999998 8988776443 3456777776654
No 233
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.92 E-value=2.1e-09 Score=92.38 Aligned_cols=88 Identities=14% Similarity=0.313 Sum_probs=71.7
Q ss_pred CCCcEEEEEec-CCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc----------------------------HhHHH
Q 015527 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~a-~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~ 121 (405)
.+++++|.||+ +||++|..++|.+.++++++++ ++.++.|+++.. ..+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 57899999999 9999999999999999999986 688888877532 24677
Q ss_pred hCCCc------ccceEEEEe-CCeeeeeecC----CCCHHHHHHHHHhh
Q 015527 122 EYNIL------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREK 159 (405)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 159 (405)
.||+. .+|++++++ +|++...+.| ..+.+++.+.|...
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 88887 689999998 9988777655 35567777777654
No 234
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.92 E-value=2.8e-09 Score=86.30 Aligned_cols=87 Identities=8% Similarity=-0.010 Sum_probs=65.1
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcc---------------------
Q 015527 58 VVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--------------------- 115 (405)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~--------------------- 115 (405)
+.+.+++.++..-..+++++|+|| ++||++|...+|.+.++++++ .++.++.|+.+.
T Consensus 28 l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D 106 (165)
T 1q98_A 28 LVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENAKTVST 106 (165)
T ss_dssp EECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEEC
T ss_pred EECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCceEEeec
Confidence 344444433322235789999999 899999999999999999998 667777776532
Q ss_pred --cHhHHHhCCCcc---------cceEEEEe-CCeeeeeecC
Q 015527 116 --EKDLAKEYNILA---------YPTLYLFV-AGVRQFQFFG 145 (405)
Q Consensus 116 --~~~~~~~~~i~~---------~Pt~~~~~-~g~~~~~~~g 145 (405)
+..+++.|++.. .|++++++ +|++...+.|
T Consensus 107 ~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 107 FRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp TTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred cccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeC
Confidence 345777888864 49999998 8988888864
No 235
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.91 E-value=3.3e-09 Score=91.12 Aligned_cols=94 Identities=15% Similarity=0.186 Sum_probs=75.1
Q ss_pred HHHHcCCCc-EEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc---------------------------cH
Q 015527 67 SEFMGKNRN-VMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------------EK 117 (405)
Q Consensus 67 ~~~~~~~~~-~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~---------------------------~~ 117 (405)
.+.+..++. +|+.||++||++|..+.+.+.++++++++ ++.++.|+++. +.
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 334435664 56688999999999999999999999976 69999998864 23
Q ss_pred hHHHhCCCc-------ccceEEEEe-CCeeeeeecCC----CCHHHHHHHHHhhh
Q 015527 118 DLAKEYNIL-------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (405)
Q Consensus 118 ~~~~~~~i~-------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (405)
.+++.||+. ++|++++++ +|++...+.|. ++.+++.+.|....
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 578889987 899999998 89877776654 47899988887664
No 236
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.89 E-value=3.7e-08 Score=74.88 Aligned_cols=97 Identities=14% Similarity=0.202 Sum_probs=81.7
Q ss_pred CCCcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEE
Q 015527 55 AKDVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (405)
Q Consensus 55 ~~~~~~l-~~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (405)
......| +.++++.++..+++++|-|+++||.+| .+.|.++|+.+ +++.|+.++ ++++++++++. .|++++
T Consensus 20 ~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~-~~~vvl 91 (124)
T 2l4c_A 20 AQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT-GNTICL 91 (124)
T ss_dssp SCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC-SSCEEE
T ss_pred CCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC-CCeEEE
Confidence 3445556 467888999888999999999999998 67899999999 789999886 57899999998 899999
Q ss_pred EeCC-eeeeeecC----CCCHHHHHHHHHhh
Q 015527 134 FVAG-VRQFQFFG----ERTRDVISAWVREK 159 (405)
Q Consensus 134 ~~~g-~~~~~~~g----~~~~~~l~~~i~~~ 159 (405)
|+++ .....|.| ..+.+.|.+||...
T Consensus 92 fkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 92 FRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 9965 35567886 78999999999864
No 237
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.89 E-value=4.4e-09 Score=86.40 Aligned_cols=90 Identities=12% Similarity=0.111 Sum_probs=64.2
Q ss_pred CCcEEc--Ch-hhHH--HHHcCCC-cEEEEEecCCChhHhh-hHHHHHHHHHHccC-CcE-EEEEeCcc-----------
Q 015527 56 KDVVSL--NG-KNFS--EFMGKNR-NVMVMFYANWCYWSKK-LAPEFAAAAKMLKG-EAD-LVMVDAYL----------- 115 (405)
Q Consensus 56 ~~~~~l--~~-~~~~--~~~~~~~-~~~v~f~a~~C~~C~~-~~~~~~~~~~~~~~-~v~-~~~v~~~~----------- 115 (405)
..+..+ ++ +.++ +.. .++ ++++.||++||++|+. ++|.|+++++++++ ++. ++.|+.+.
T Consensus 35 f~l~~~~~~G~~~v~L~d~~-~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~ 113 (184)
T 3uma_A 35 ATFKEKTADGPVEVTTELLF-KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHS 113 (184)
T ss_dssp CEEEEEETTEEEEEEHHHHH-TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHH
T ss_pred cEeecccCCCceEEeHHHHh-CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHh
Confidence 345555 44 4443 323 455 4566677999999999 79999999999976 677 88887653
Q ss_pred ------------cHhHHHhCCCc-----------ccceEEEEeCCeeeeeecCC
Q 015527 116 ------------EKDLAKEYNIL-----------AYPTLYLFVAGVRQFQFFGE 146 (405)
Q Consensus 116 ------------~~~~~~~~~i~-----------~~Pt~~~~~~g~~~~~~~g~ 146 (405)
+..+++.||+. +.|+++++++|++...+.|.
T Consensus 114 ~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~ 167 (184)
T 3uma_A 114 GGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEE 167 (184)
T ss_dssp TCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEETTEEEEEEECS
T ss_pred CCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEECCCEEEEEEEeC
Confidence 23467788875 35778888999888777653
No 238
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.88 E-value=6.5e-09 Score=83.82 Aligned_cols=75 Identities=11% Similarity=0.047 Sum_probs=60.2
Q ss_pred CCCcEEEEEe-cCCChhHh-hhHHHHHHHHHHccC-CcE-EEEEeCcc-----------------------cHhHHHhCC
Q 015527 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYN 124 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~-~~~~~~~~~~~~~~~-~v~-~~~v~~~~-----------------------~~~~~~~~~ 124 (405)
++++++|.|| ++||++|. .++|.+.++++++++ ++. ++.|+.+. +..+++.||
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALG 113 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcC
Confidence 5789999999 89999999 999999999998864 677 77776542 234677888
Q ss_pred Cc-----------ccceEEEEeCCeeeeeecCC
Q 015527 125 IL-----------AYPTLYLFVAGVRQFQFFGE 146 (405)
Q Consensus 125 i~-----------~~Pt~~~~~~g~~~~~~~g~ 146 (405)
+. ..|+++++++|++...+.|.
T Consensus 114 v~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 114 LELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp CEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred cccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 76 37999999999877776664
No 239
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.87 E-value=1.4e-08 Score=82.42 Aligned_cols=107 Identities=15% Similarity=0.189 Sum_probs=74.9
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCCh-hHhhhHHHHHHHHHHccC---CcEEEEEeCccc---Hh----HHHh
Q 015527 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLKG---EADLVMVDAYLE---KD----LAKE 122 (405)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~~C~-~C~~~~~~~~~~~~~~~~---~v~~~~v~~~~~---~~----~~~~ 122 (405)
++..+.+.+++.++..-..|++++|+||++||+ .|...++.+.++.+.++. ++.++.|.+|.. ++ .+++
T Consensus 13 PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~ 92 (170)
T 4hde_A 13 ETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQK 92 (170)
T ss_dssp CCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTT
T ss_pred CCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHH
Confidence 344566666666554334789999999999996 799999999988887753 688888876532 11 1222
Q ss_pred CC------------------------------------CcccceEEEEe-CCeeeeeecCC--CCHHHHHHHHHhhh
Q 015527 123 YN------------------------------------ILAYPTLYLFV-AGVRQFQFFGE--RTRDVISAWVREKM 160 (405)
Q Consensus 123 ~~------------------------------------i~~~Pt~~~~~-~g~~~~~~~g~--~~~~~l~~~i~~~~ 160 (405)
|+ +...|++++++ +|+++..|.|. ...+.+.+-|++++
T Consensus 93 ~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 93 FTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp TCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 22 22347889998 99888888874 45677887777654
No 240
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.87 E-value=4.2e-09 Score=88.78 Aligned_cols=81 Identities=11% Similarity=0.188 Sum_probs=62.4
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEE--e-------------------------------------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMV--D------------------------------------- 112 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v--~------------------------------------- 112 (405)
+++++++.||++||++|++++|.+.++.+. ++.+..+ .
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 356899999999999999999999997653 2443322 1
Q ss_pred -C----cccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhh
Q 015527 113 -A----YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREK 159 (405)
Q Consensus 113 -~----~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (405)
| +.+..+++++||+++||+++ .+|+ .+.|..+.+.|.++|.+.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPADLLRALEET 209 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHHHHHHHHHhc
Confidence 1 13456788999999999987 6784 678989999999998753
No 241
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.87 E-value=5.8e-09 Score=84.42 Aligned_cols=75 Identities=11% Similarity=0.056 Sum_probs=58.9
Q ss_pred CCCcEEEEEe-cCCChhHhh-hHHHHHHHHHHccC-Cc-EEEEEeCcc-----------------------cHhHHHhCC
Q 015527 72 KNRNVMVMFY-ANWCYWSKK-LAPEFAAAAKMLKG-EA-DLVMVDAYL-----------------------EKDLAKEYN 124 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~-~~~~~~~~~~~~~~-~v-~~~~v~~~~-----------------------~~~~~~~~~ 124 (405)
.+++++|.|| ++||++|.. ++|.++++++++++ ++ .++.|+.+. +.++++.||
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~g 109 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVD 109 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcC
Confidence 5678888876 999999999 99999999998865 78 888887643 234667778
Q ss_pred Cccc-----------ceEEEEeCCeeeeeecCC
Q 015527 125 ILAY-----------PTLYLFVAGVRQFQFFGE 146 (405)
Q Consensus 125 i~~~-----------Pt~~~~~~g~~~~~~~g~ 146 (405)
+... |+++++++|++...+.+.
T Consensus 110 v~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~ 142 (167)
T 2wfc_A 110 MELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEP 142 (167)
T ss_dssp CEECCHHHHSSCEECCEEEEEETTEEEEEEECT
T ss_pred CccccccccCcccceEEEEEEeCCEEEEEEecC
Confidence 7654 888888999877766653
No 242
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.85 E-value=1.5e-07 Score=89.88 Aligned_cols=194 Identities=13% Similarity=0.077 Sum_probs=128.3
Q ss_pred CccccCChhHHHHHh-ccCCeEEEEEEcCCCCc---cHHHHHHHh-ccCC---cceEEEec-----CHHHHhhcCCCCCC
Q 015527 163 GTYSITTTDEAERIL-TVESKLVLGFLHDLEGM---ESEELAAAS-KLHS---DVNFYQTT-----SADVAEFFHIHPKS 229 (405)
Q Consensus 163 ~~~~i~~~~~~~~~l-~~~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~---~~~f~~~~-----~~~l~~~~~~~~~~ 229 (405)
.+..++ .++++..+ +.++.++|.|+++||++ ..+.+.+++ ++.+ .+.|+.++ +.+++++|++..
T Consensus 13 ~V~~Lt-~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~-- 89 (519)
T 3t58_A 13 PLTLLD-ADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG-- 89 (519)
T ss_dssp SSEEEC-TTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS--
T ss_pred CcEECC-hHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc--
Confidence 455664 45666544 56689999999999998 444566666 3443 68888764 568999999994
Q ss_pred CCCeEEEeecCC---CccccccCCCCHHHHHHHHhcc----C------CCCccccccccccccccCCc--cEEEEEecCC
Q 015527 230 KRPALIFLHLEA---GKATPFRHQFTRLAIANFVTHT----K------HPLVVTLTIHNAQFVFQDPR--KQLWLFAPAY 294 (405)
Q Consensus 230 ~~p~i~~~~~~~---~~~~~y~g~~~~~~l~~fi~~~----~------~p~v~~l~~~~~~~~~~~~~--~~~i~f~~~~ 294 (405)
+|++++|+.+. .....+.|..+.+.|.+||.+. . .|.+..++..++..++.... +++++|.+..
T Consensus 90 -~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~ 168 (519)
T 3t58_A 90 -FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFERED 168 (519)
T ss_dssp -BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTT
T ss_pred -cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCc
Confidence 99999999632 1234455667888888887642 2 23455666677777776544 6777777654
Q ss_pred CcHHHHHHHHHHHHHhc--CcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCC-CHHHHHHHHHH
Q 015527 295 GSDKVILTFEEVAKALK--GKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGEL-TLSSIKSFGEE 371 (405)
Q Consensus 295 ~~~~~~~~~~~va~~~~--~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~-~~~~l~~Fi~~ 371 (405)
. ...++++..+. ..+.+..++..+ ..+++.||++. .|.+++++.+|+.-.++-.. +.+.+..+++.
T Consensus 169 s-----~~~~~~~ldl~~~~~v~v~~v~~~~----~~l~~kfgV~~--~Pslvl~~~nGk~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 169 S-----YLGREVTLDLSQYHAVAVRRVLNTE----SDLVNKFGVTD--FPSCYLLLRNGSVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp C-----CHHHHHHHHTTTCTTEEEEEEETTC----HHHHHHHTCCC--SSEEEEEETTSCEEECCCSSCSHHHHHHHHTT
T ss_pred h-----HHHHHHHHHhhccCCeeEEEecCch----HHHHHHcCCCC--CCeEEEEeCCCceeecccccccHHHHHHHHHH
Confidence 2 14567777776 458888876553 37889999986 68988888766543333322 22334444443
No 243
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.84 E-value=8.2e-09 Score=86.25 Aligned_cols=89 Identities=8% Similarity=0.031 Sum_probs=66.9
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcc-------------------
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL------------------- 115 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~------------------- 115 (405)
..+.+.+++.++..-..+++++|.|| +.||++|..++|.++++++++ .++.++.|.++.
T Consensus 61 f~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l 139 (200)
T 3zrd_A 61 FTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEGLSNVITL 139 (200)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEE
T ss_pred eEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcCCCCceEE
Confidence 34455555544432236789999999 689999999999999999999 568888887642
Q ss_pred ----cHhHHHhCCCc---------ccceEEEEe-CCeeeeeecC
Q 015527 116 ----EKDLAKEYNIL---------AYPTLYLFV-AGVRQFQFFG 145 (405)
Q Consensus 116 ----~~~~~~~~~i~---------~~Pt~~~~~-~g~~~~~~~g 145 (405)
+..+++.|++. ..|++++++ +|+++..+.+
T Consensus 140 ~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~ 183 (200)
T 3zrd_A 140 STLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELV 183 (200)
T ss_dssp ETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred ecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEec
Confidence 34567778876 369999998 8988777653
No 244
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.81 E-value=4.2e-09 Score=91.19 Aligned_cols=88 Identities=13% Similarity=0.302 Sum_probs=70.5
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc----------------------------HhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~ 121 (405)
.+++++|.|| ++||++|..++|.+.++++++++ ++.++.|+++.. ..+++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 5789999999 99999999999999999999976 688888877532 24667
Q ss_pred hCCCc------ccceEEEEe-CCeeeeeecC----CCCHHHHHHHHHhh
Q 015527 122 EYNIL------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREK 159 (405)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 159 (405)
.||+. .+|++++++ +|++...+.+ ..+.+++.+.|...
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 77875 589999998 9988777665 45667777776543
No 245
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.81 E-value=5.6e-09 Score=73.40 Aligned_cols=71 Identities=11% Similarity=0.174 Sum_probs=53.5
Q ss_pred EEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHH---hCCCcccceEEEEeCCeeeeeecCCCCHHHHH
Q 015527 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK---EYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (405)
Q Consensus 77 ~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~---~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (405)
++.|+++||++|+...+.+++. ++.+..+|+++++++.+ ++++.++|++ +.+|+. .|..+.+.|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~----~~g~~~~~l~ 70 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS----WSGFRPDMIN 70 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE----EESCCHHHHG
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE----EecCCHHHHH
Confidence 6779999999999999988763 46788899988766554 5899999998 347743 2345777777
Q ss_pred HHHHhh
Q 015527 154 AWVREK 159 (405)
Q Consensus 154 ~~i~~~ 159 (405)
+++.+.
T Consensus 71 ~~l~~~ 76 (81)
T 1h75_A 71 RLHPAP 76 (81)
T ss_dssp GGSCCC
T ss_pred HHHhcc
Confidence 766544
No 246
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.78 E-value=1.9e-08 Score=83.54 Aligned_cols=87 Identities=16% Similarity=0.221 Sum_probs=69.4
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc-------------------------------------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------------------- 114 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~------------------------------------- 114 (405)
.++++++.||..||++|+.+.|.+.++.+++.+++.|..+...
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~~~~ 103 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHK 103 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 4688999999999999999999999999999877777755441
Q ss_pred ---c---------------------------------cHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHh
Q 015527 115 ---L---------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (405)
Q Consensus 115 ---~---------------------------------~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (405)
. +...++++||.++||+++ +|+......|..+.+.+.+.|..
T Consensus 104 ~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~i~~ 181 (192)
T 3h93_A 104 KLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKLADY 181 (192)
T ss_dssp CCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHHHHH
Confidence 0 112345679999999877 78666666788899999888877
Q ss_pred hh
Q 015527 159 KM 160 (405)
Q Consensus 159 ~~ 160 (405)
.+
T Consensus 182 l~ 183 (192)
T 3h93_A 182 LI 183 (192)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 247
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.78 E-value=1.4e-08 Score=82.49 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=55.2
Q ss_pred cCCCcEEEEEecCCChhHhhh-HHHHHHHHHHccC-CcE-EEEEeCcc-----------------------cHhHHHhCC
Q 015527 71 GKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYN 124 (405)
Q Consensus 71 ~~~~~~~v~f~a~~C~~C~~~-~~~~~~~~~~~~~-~v~-~~~v~~~~-----------------------~~~~~~~~~ 124 (405)
...+++++.||++||++|..+ +|.|.++++++++ ++. ++.|+.+. +..+++.||
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 121 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLE 121 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHT
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhC
Confidence 333577889999999999999 9999999998865 677 88887653 123556666
Q ss_pred Ccc-----------cceEEEEeCCeeeeeecCC
Q 015527 125 ILA-----------YPTLYLFVAGVRQFQFFGE 146 (405)
Q Consensus 125 i~~-----------~Pt~~~~~~g~~~~~~~g~ 146 (405)
+.. .|+.+++.+|++...+.|.
T Consensus 122 v~~~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~ 154 (171)
T 2pwj_A 122 LTTDLSAGLLGIRSERWSAYVVDGKVKALNVEE 154 (171)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTEEEEEEECS
T ss_pred CccccccccCCcccceeEEEEECCEEEEEEeec
Confidence 642 3455555688777777653
No 248
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.77 E-value=3.2e-08 Score=68.26 Aligned_cols=69 Identities=12% Similarity=0.169 Sum_probs=53.9
Q ss_pred EEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHH---hCCCcccceEEEEeCCeeeeeecCCCCHHHHH
Q 015527 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK---EYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (405)
Q Consensus 77 ~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~---~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (405)
++.|+++||++|+...+.+++. ++.+..+|++.++++.+ .+++.++|++++ +|+. .|..+.+.|.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~----~~g~~~~~l~ 70 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH----WSGFRPERIK 70 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE----EESCCHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE----EcCCCHHHHH
Confidence 5779999999999999988764 46778889888776655 899999999873 7742 3445788888
Q ss_pred HHHH
Q 015527 154 AWVR 157 (405)
Q Consensus 154 ~~i~ 157 (405)
+++.
T Consensus 71 ~~l~ 74 (75)
T 1r7h_A 71 QLQA 74 (75)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7763
No 249
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.77 E-value=1.7e-08 Score=82.03 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=55.9
Q ss_pred CCCcEE-EEEecCCChhHh-hhHHHHHHHHHHccC-CcEEEE-EeCcc-----------------------cHhHHHhCC
Q 015527 72 KNRNVM-VMFYANWCYWSK-KLAPEFAAAAKMLKG-EADLVM-VDAYL-----------------------EKDLAKEYN 124 (405)
Q Consensus 72 ~~~~~~-v~f~a~~C~~C~-~~~~~~~~~~~~~~~-~v~~~~-v~~~~-----------------------~~~~~~~~~ 124 (405)
.+++++ +.||++||++|. .++|.|.++++++++ ++.++. |..+. +.++++.||
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 121 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETD 121 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHHhC
Confidence 466554 455699999999 599999999999976 576664 66543 235677888
Q ss_pred Cc-------------ccceEEEEeCCeeeeeecCC
Q 015527 125 IL-------------AYPTLYLFVAGVRQFQFFGE 146 (405)
Q Consensus 125 i~-------------~~Pt~~~~~~g~~~~~~~g~ 146 (405)
+. ..|+++++++|++...+.+.
T Consensus 122 v~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~ 156 (173)
T 3mng_A 122 LLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEP 156 (173)
T ss_dssp CBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECT
T ss_pred CCcccccccccCCcceEEEEEEEECCEEEEEEEeC
Confidence 75 35999999999877776653
No 250
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.76 E-value=3.4e-08 Score=85.01 Aligned_cols=86 Identities=13% Similarity=0.215 Sum_probs=65.4
Q ss_pred CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC---------------------------------------
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA--------------------------------------- 113 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~--------------------------------------- 113 (405)
++.+++.|+.+||++|+++.+.+.++.+. ++|.+..+..
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 45789999999999999999999887765 3565554332
Q ss_pred -----------cccHhHHHhCCCcccceEEEEe-CCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 114 -----------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 114 -----------~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+.+..+++++||.++||+++.+ +|+ .....|..+.+.|.++|.+...
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSCCHHHHHHHTTC---
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCCCHHHHHHHHHHHHH
Confidence 1223467789999999999987 684 4678899999999999887653
No 251
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.75 E-value=4.1e-08 Score=72.62 Aligned_cols=96 Identities=20% Similarity=0.279 Sum_probs=75.3
Q ss_pred ccccCChhHHHHHhcc--CCeEEEEEEcCCCCcc---HHHHHHHhccCCcceEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 015527 164 TYSITTTDEAERILTV--ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (405)
Q Consensus 164 ~~~i~~~~~~~~~l~~--~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~~~~~~~~p~i~ 235 (405)
+..+.+.++++..+.. ++.++|.|+++||+++ .+.+.++++..+++.|+.+ .+.+++++|+++. .|+++
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~---~PT~~ 78 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIAC---MPTFL 78 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCB---SSEEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCCCe---ecEEE
Confidence 3467788899888864 5688899999999984 5556777766677888766 5678999999994 99999
Q ss_pred EeecCCCccccccCCCCHHHHHHHHhccC
Q 015527 236 FLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (405)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~~~ 264 (405)
+|+++. ....+.| .+.++|.+||++|+
T Consensus 79 ~~~~G~-~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 79 FMKNGQ-KLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp EEETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred EEECCE-EEEEEeC-cCHHHHHHHHHhcC
Confidence 998653 4456777 47899999998874
No 252
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.74 E-value=1e-08 Score=76.02 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=51.2
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCccc-------HhHHHhCCCcccceEEEEeC
Q 015527 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-------KDLAKEYNILAYPTLYLFVA 136 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~-------~~~~~~~~i~~~Pt~~~~~~ 136 (405)
+.+++.+..+ .++.|+++||++|+.+.+.+.++...++ + +..+|++.+ ..+.+.+++.++|++ |.+
T Consensus 3 ~~~~~~i~~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~ 75 (105)
T 1kte_A 3 AFVNSKIQPG--KVVVFIKPTCPFCRKTQELLSQLPFKEG-L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIG 75 (105)
T ss_dssp HHHHHHCCTT--CEEEEECSSCHHHHHHHHHHHHSCBCTT-S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EET
T ss_pred hHHHhhcccC--CEEEEEcCCCHhHHHHHHHHHHcCCCCC-c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EEC
Confidence 3455666544 3667999999999999999988655543 2 455566554 357788999999997 447
Q ss_pred Ceeeeee
Q 015527 137 GVRQFQF 143 (405)
Q Consensus 137 g~~~~~~ 143 (405)
|+.+..+
T Consensus 76 g~~i~g~ 82 (105)
T 1kte_A 76 KECIGGC 82 (105)
T ss_dssp TEEEESH
T ss_pred CEEEecc
Confidence 8654433
No 253
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.72 E-value=1.3e-07 Score=76.26 Aligned_cols=117 Identities=14% Similarity=0.166 Sum_probs=89.9
Q ss_pred HHHHHhccCCCCccccccccccccccCCc--cEEEEEec--------CCC-cHHHHHHHHHHHHHhc-----CcEEEEEE
Q 015527 256 IANFVTHTKHPLVVTLTIHNAQFVFQDPR--KQLWLFAP--------AYG-SDKVILTFEEVAKALK-----GKLLHVYV 319 (405)
Q Consensus 256 l~~fi~~~~~p~v~~l~~~~~~~~~~~~~--~~~i~f~~--------~~~-~~~~~~~~~~va~~~~-----~~~~f~~i 319 (405)
+.+++....-..+.++|..||..+..... ++++.|.. ||. |+.+.+.|+++|+++. +++.|+.+
T Consensus 8 ~~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 8 IDDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp CHHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 34444445556688999999998876433 67777765 777 9999999999999998 89999999
Q ss_pred EcCCcchhhhhhhhcCCCCCCCcEEEEEeCCC-cc-----------cc--CC-C-CCCHHHHHHHHHHHhcCce
Q 015527 320 EMNSEGVGRRVSQEFGVSGNAPRVIAYSARDA-KK-----------YV--LN-G-ELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 320 d~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~-~~-----------y~--~~-~-~~~~~~l~~Fi~~~~~Gkl 377 (405)
|.++. +.+.+.|||.. .|.++++..++ .. +. +. + ..+.+.|.+||.+.+.-++
T Consensus 88 D~d~~---~~la~~~~I~s--iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i 156 (178)
T 3ga4_A 88 DVNEV---PQLVKDLKLQN--VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISI 156 (178)
T ss_dssp ETTTC---HHHHHHTTCCS--SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCC
T ss_pred ECccC---HHHHHHcCCCC--CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCc
Confidence 99975 49999999976 78988888732 22 33 33 3 6888999999998776433
No 254
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.71 E-value=8.1e-08 Score=81.57 Aligned_cols=86 Identities=13% Similarity=0.077 Sum_probs=67.5
Q ss_pred cEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc-------------------------------HhHHHh
Q 015527 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-------------------------------KDLAKE 122 (405)
Q Consensus 75 ~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~-------------------------------~~~~~~ 122 (405)
.+|+.||++||++|..+++.+.++++++++ ++.++.|.++.. ..+++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 566677999999999999999999999976 788888877532 235667
Q ss_pred CCCc------------ccceEEEEe-CCeeeeeecC----CCCHHHHHHHHHhhh
Q 015527 123 YNIL------------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREKM 160 (405)
Q Consensus 123 ~~i~------------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~~ 160 (405)
||+. ..|++++++ +|++...+.| .++.+++.+.|+.+.
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 7773 379999998 8988777754 357888888887654
No 255
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.70 E-value=6.2e-08 Score=72.10 Aligned_cols=104 Identities=15% Similarity=0.185 Sum_probs=84.5
Q ss_pred CCccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 266 PLVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 266 p~v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
+.+..++.+++......+.+.++ ++.+||. |....+.+.++++++.+++.|+.+|++... .+++.|++.. .|.
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~i~~--~Pt 78 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQ---KIADKYSVLN--IPT 78 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH---HHHHHTTCCS--SSE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCH---HHHHhcCccc--CCE
Confidence 56778889999888877776555 5666776 999999999999999999999999999754 8899999975 788
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
++++..+.....+.|..+.++|.+|++++++
T Consensus 79 ~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 79 TLIFVNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred EEEEcCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 8888544445567888899999999998763
No 256
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.69 E-value=5.5e-08 Score=80.94 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=38.7
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY 114 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~ 114 (405)
.++++++.||++||++|+.+.|.+.++.+.+.+++.|..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 4688999999999999999999999999999877888888764
No 257
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.66 E-value=2e-07 Score=71.83 Aligned_cols=103 Identities=22% Similarity=0.204 Sum_probs=83.2
Q ss_pred Cccccccccccc-cccCCccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 267 LVVTLTIHNAQF-VFQDPRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 267 ~v~~l~~~~~~~-~~~~~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
.+..++.+++.. +...+.+++ .++.+||. |+...+.+.++++++.+++.|+.+|++... .+++.|++.. .|.
T Consensus 18 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~v~~--~Pt 92 (130)
T 2dml_A 18 DVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQ---SLGGQYGVQG--FPT 92 (130)
T ss_dssp SSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCH---HHHHHHTCCS--SSE
T ss_pred CcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCH---HHHHHcCCCc--cCE
Confidence 467788888887 444455554 45667877 999999999999999999999999999754 8899999975 789
Q ss_pred EEEEeCCCc-cccCCCCCCHHHHHHHHHHHhc
Q 015527 344 IAYSARDAK-KYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 344 i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
+++++.++. ...+.|..+.+++.+|+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 93 IKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 999887555 6678888999999999998763
No 258
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.66 E-value=8.1e-08 Score=71.77 Aligned_cols=102 Identities=18% Similarity=0.233 Sum_probs=81.5
Q ss_pred ccccccccccccc-cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 268 VVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 268 v~~l~~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
+..++.+++.... ..+.+.++ ++.+||. |+.+.+.+.++++++.+++.|+.+|++... .+++.||+.. .|.+
T Consensus 6 v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~v~~--~Pt~ 80 (111)
T 3gnj_A 6 LEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK---TLFQRFSLKG--VPQI 80 (111)
T ss_dssp SEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH---HHHHHTTCCS--SCEE
T ss_pred ceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh---hHHHhcCCCc--CCEE
Confidence 5667888888777 45555555 5667776 999999999999999999999999999754 8999999975 7888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
+++..+.....+.|..+.+.+.+||++.+.
T Consensus 81 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 81 LYFKDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 888644444567888899999999998764
No 259
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.66 E-value=1.4e-07 Score=73.95 Aligned_cols=88 Identities=20% Similarity=0.331 Sum_probs=73.4
Q ss_pred CccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCC
Q 015527 283 PRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGEL 360 (405)
Q Consensus 283 ~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~ 360 (405)
+.+++ .++.+||. |..+.+.+.++++++.+++.|+.+|++... .+++.||+.. .|.+++++.+|....+.|..
T Consensus 51 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~~~~~~~g~~~~~~G~~ 125 (141)
T 3hxs_A 51 DKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEP---ELARDFGIQS--IPTIWFVPMKGEPQVNMGAL 125 (141)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTTCCS--SSEEEEECSSSCCEEEESCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCH---HHHHHcCCCC--cCEEEEEeCCCCEEEEeCCC
Confidence 34544 46667887 999999999999999999999999999754 8999999975 79999987766656778889
Q ss_pred CHHHHHHHHHHHhcC
Q 015527 361 TLSSIKSFGEEFLED 375 (405)
Q Consensus 361 ~~~~l~~Fi~~~~~G 375 (405)
+.+.|.+||+.++..
T Consensus 126 ~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 126 SKEQLKGYIDKVLLK 140 (141)
T ss_dssp CHHHHHHHHHHTTC-
T ss_pred CHHHHHHHHHHHHcc
Confidence 999999999998764
No 260
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.64 E-value=9.2e-08 Score=81.54 Aligned_cols=87 Identities=8% Similarity=0.030 Sum_probs=68.2
Q ss_pred CcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc-----------------------------HhHHHh
Q 015527 74 RNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----------------------------KDLAKE 122 (405)
Q Consensus 74 ~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~-----------------------------~~~~~~ 122 (405)
+.+++.|| ++||+.|..+++.+.++++++++ ++.++.|.++.. ..+++.
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ 109 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVK 109 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHH
Confidence 48889998 99999999999999999999876 688888876532 235667
Q ss_pred CCCc------------ccceEEEEe-CCeeeeeecC----CCCHHHHHHHHHhhh
Q 015527 123 YNIL------------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREKM 160 (405)
Q Consensus 123 ~~i~------------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~~ 160 (405)
||+. ..|++++++ +|++...+.| .++.+++.+.|..+.
T Consensus 110 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 110 LGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp TTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 7774 579999998 8987776654 357888888887654
No 261
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.64 E-value=2.5e-07 Score=71.01 Aligned_cols=102 Identities=18% Similarity=0.192 Sum_probs=81.4
Q ss_pred CCcccccccccccccc-CCccE-EEEEecCCC-cHHHHHHHHHHHHHhc-----CcEEEEEEEcCCcchhhhhhhhcCCC
Q 015527 266 PLVVTLTIHNAQFVFQ-DPRKQ-LWLFAPAYG-SDKVILTFEEVAKALK-----GKLLHVYVEMNSEGVGRRVSQEFGVS 337 (405)
Q Consensus 266 p~v~~l~~~~~~~~~~-~~~~~-~i~f~~~~~-~~~~~~~~~~va~~~~-----~~~~f~~id~~~~~~~~~~~~~~gi~ 337 (405)
+.+..++.+++..... .+.++ +.++++||. |+.+.+.|.++|.++. +++.|+.+|++... .+++.|++.
T Consensus 15 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~v~ 91 (127)
T 3h79_A 15 SRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP---DVIERMRVS 91 (127)
T ss_dssp CCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH---HHHHHTTCC
T ss_pred CceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH---hHHHhcCCc
Confidence 4578889999988774 34554 446778887 9999999999998764 56999999999754 899999997
Q ss_pred CCCCcEEEEEeCCCc--cccCCCCCCHHHHHHHHHHH
Q 015527 338 GNAPRVIAYSARDAK--KYVLNGELTLSSIKSFGEEF 372 (405)
Q Consensus 338 ~~~~p~i~i~~~~~~--~y~~~~~~~~~~l~~Fi~~~ 372 (405)
. .|.+++++.++. .+.+.|..+.+.|.+||++.
T Consensus 92 ~--~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 92 G--FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp S--SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred c--CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 5 789888876333 26788999999999999874
No 262
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.63 E-value=2.7e-07 Score=68.47 Aligned_cols=102 Identities=18% Similarity=0.263 Sum_probs=79.2
Q ss_pred Cccccccccccc-cccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 267 LVVTLTIHNAQF-VFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 267 ~v~~l~~~~~~~-~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
.+..++.+++.. +...+.+.++ ++.+||. |....+.+.++++++.+++.|+.+|++... .+++.||+.. .|.
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt 77 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP---GTAPKYGIRG--IPT 77 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCT---THHHHTTCCS--SSE
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCH---HHHHHcCCcc--cCE
Confidence 356778888874 3445555555 5556776 999999999999999989999999999754 8889999975 688
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
++++..+.....+.|..+.+.+.+|++..+
T Consensus 78 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 78 LLLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 888753333455778889999999999876
No 263
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.63 E-value=1.6e-07 Score=69.44 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=80.7
Q ss_pred CccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 267 LVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 267 ~v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
.+.+++.+++.... .+.+.++ ++.+||. |....+.+.++++++++++.|+.+|++... .+++.|++.. .|.+
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~ 77 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENP---STAAKYEVMS--IPTL 77 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTTCCS--BSEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCH---HHHHhCCCcc--cCEE
Confidence 35677888888877 4555444 5667776 999999999999999999999999999754 8899999975 7888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
++++.+.....+.|..+.+++.+|+++++
T Consensus 78 ~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 78 IVFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 88874444456788889999999998753
No 264
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.63 E-value=7.1e-08 Score=81.66 Aligned_cols=86 Identities=9% Similarity=0.112 Sum_probs=66.9
Q ss_pred cEEEEEecCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCccc----------------------------HhHHHhCCC
Q 015527 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAKEYNI 125 (405)
Q Consensus 75 ~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~~~~i 125 (405)
.+|+.||++||+.|..+++.+.++++++++ ++.++.|.++.. ..+++.||+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 455556899999999999999999999976 788888887532 235667777
Q ss_pred c------------ccceEEEEe-CCeeeeeecC----CCCHHHHHHHHHhhh
Q 015527 126 L------------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREKM 160 (405)
Q Consensus 126 ~------------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~~ 160 (405)
. ..|++++++ +|++...+.| .++.+++.+.|+.+.
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 3 479999998 8987776653 467888888887654
No 265
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.61 E-value=3.5e-07 Score=68.70 Aligned_cols=104 Identities=15% Similarity=0.178 Sum_probs=81.1
Q ss_pred Cccccccccccccc-cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 267 LVVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 267 ~v~~l~~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
.+..++.+++.... ..+.+.++ ++.++|. |....+.+.++++++.+++.|+.+|++... .+++.||+.. .|.
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~---~~~~~~~v~~--~Pt 82 (115)
T 1thx_A 8 GVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP---TTVKKYKVEG--VPA 82 (115)
T ss_dssp SEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCH---HHHHHTTCCS--SSE
T ss_pred ceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCH---HHHHHcCCCc--eeE
Confidence 46778888887554 44555544 5667776 999999999999999988999999999754 8899999975 688
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
++++..+...+.+.|..+.+.+.+|++.++.+
T Consensus 83 ~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 83 LRLVKGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEcCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 88884333344577888999999999998865
No 266
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.61 E-value=2.4e-07 Score=72.55 Aligned_cols=106 Identities=21% Similarity=0.236 Sum_probs=72.0
Q ss_pred CCccccccccccccccCCc-cEEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 266 PLVVTLTIHNAQFVFQDPR-KQLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 266 p~v~~l~~~~~~~~~~~~~-~~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
+.+.+++.+++........ .++.++.+|+. |..+.+.|.+++.++.+++.|+.+|++... .+++.||+.. .|.
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~v~~--~Pt 107 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP---GLAARYGVRS--VPT 107 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH---HHHHHTTCCS--SSE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCH---HHHHHCCCCc--cCE
Confidence 4456777888776654443 34445667776 899999999999999988999999999754 8889999965 788
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHHHHhcCc
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
++++..+.....+.|..+.+.+.+||+.++.|+
T Consensus 108 ~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 108 LVLFRRGAPVATWVGASPRRVLEERLRPYLEGR 140 (140)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHTCC
T ss_pred EEEEeCCcEEEEEeCCCCHHHHHHHHHHHHccC
Confidence 888864333455788889999999999999874
No 267
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.61 E-value=1.3e-07 Score=70.28 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=80.4
Q ss_pred ccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEE
Q 015527 268 VVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 345 (405)
Q Consensus 268 v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~ 345 (405)
+.+++.+++..+...+.+.++ ++.++|. |....+.+.++++++.+++.|+.+|++... .+++.||+.. .|.++
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~~ 77 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENP---KTAMRYRVMS--IPTVI 77 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH---HHHHHTTCCS--SSEEE
T ss_pred ceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCH---hHHHhCCCCc--CCEEE
Confidence 456788888877766665555 5556666 899999999999999988999999998754 8899999975 68888
Q ss_pred EEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 346 YSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 346 i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
++..+.....+.|..+.+.+.+|+++.+..
T Consensus 78 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 78 LFKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EEeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 885443345577888999999999988754
No 268
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.61 E-value=1.3e-07 Score=69.86 Aligned_cols=101 Identities=19% Similarity=0.166 Sum_probs=79.4
Q ss_pred ccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEE
Q 015527 268 VVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 345 (405)
Q Consensus 268 v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~ 345 (405)
+..++.+++......+.+.++ ++.+||. |....+.+.++++++.+++.|+.+|++... .+++.||+.. .|.++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~---~~~~~~~v~~--~Pt~~ 76 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP---ETTSQFGIMS--IPTLI 76 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCH---HHHHHTTCCS--SSEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCH---HHHHHcCCcc--ccEEE
Confidence 356777888877766666555 5556776 999999999999999988999999999754 8899999975 68888
Q ss_pred EEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 346 YSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 346 i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
++..+.....+.|..+.+.+.+|+++++
T Consensus 77 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred EEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 8753433455778888999999998765
No 269
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=4.1e-08 Score=75.74 Aligned_cols=87 Identities=17% Similarity=0.154 Sum_probs=57.2
Q ss_pred hhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCccc---H----hHHHhCCCcccceEEEEe
Q 015527 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~---~----~~~~~~~i~~~Pt~~~~~ 135 (405)
.+.++..+..++ + +.|+++||++|+.+.+.+.++. +.+..+|++.+ + .+.+.+++.++|+++ .
T Consensus 17 ~~~~~~~i~~~~-v-vvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i 86 (130)
T 2cq9_A 17 VNQIQETISDNC-V-VIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 86 (130)
T ss_dssp HHHHHHHHHHSS-E-EEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--E
T ss_pred HHHHHHHHcCCc-E-EEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--E
Confidence 455666665553 3 3499999999999999988753 34555666654 3 377889999999984 4
Q ss_pred CCeeeeeec---CCCCHHHHHHHHHhh
Q 015527 136 AGVRQFQFF---GERTRDVISAWVREK 159 (405)
Q Consensus 136 ~g~~~~~~~---g~~~~~~l~~~i~~~ 159 (405)
+|+.+..+. +......|.++|...
T Consensus 87 ~G~~igg~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 87 NGTFIGGATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp TTEEEEEHHHHHHHHHHTSSHHHHHHH
T ss_pred CCEEEcChHHHHHHHHcCcHHHHHHHc
Confidence 786554432 223334455555543
No 270
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.60 E-value=1.1e-07 Score=74.45 Aligned_cols=114 Identities=14% Similarity=0.223 Sum_probs=88.1
Q ss_pred CCcccccccccc-ccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 266 PLVVTLTIHNAQ-FVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 266 p~v~~l~~~~~~-~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
+.+..++..++. .+...+.++++ ++.+||. |..+.+.+.++++++.+++.|+.+|++... .+++.|++.. .|
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~v~~--~P 80 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNP---WTAEKYGVQG--TP 80 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCH---HHHHHHTCCE--ES
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCH---hHHHHCCCCc--CC
Confidence 456778888888 55555565555 5667777 999999999999999999999999999754 8999999975 78
Q ss_pred EEEEEeCCCccccCCCCCCHHHHHHHHHHHhcCce--eeecccC
Q 015527 343 VIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL--LNQSDQI 384 (405)
Q Consensus 343 ~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~Gkl--~~kse~i 384 (405)
.++++..+.....+.|..+.+.|.+||+.++...- ..++.++
T Consensus 81 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~~~~~~ 124 (140)
T 3hz4_A 81 TFKFFCHGRPVWEQVGQIYPSILKNAVRDMLQHGEECIRKSTPV 124 (140)
T ss_dssp EEEEEETTEEEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSBC-
T ss_pred EEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhcccccCccccccc
Confidence 88888644444567888899999999999987644 3344443
No 271
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.60 E-value=2.3e-07 Score=69.48 Aligned_cols=102 Identities=16% Similarity=0.165 Sum_probs=81.0
Q ss_pred ccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEE
Q 015527 268 VVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 345 (405)
Q Consensus 268 v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~ 345 (405)
+.+++.+++.... .+.+.++ ++.+||. |....+.+.++++++.+++.|+.+|++... .+++.||+.. .|.++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~v~~--~Pt~~ 76 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQ---ETAGKYGVMS--IPTLL 76 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCC---SHHHHTTCCS--BSEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCH---HHHHHcCCCc--ccEEE
Confidence 4567888887777 5555544 6667777 999999999999999988999999999754 8899999975 78888
Q ss_pred EEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 346 YSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 346 i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
++..+...+.+.|..+.+++.+|+++.+..
T Consensus 77 ~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 77 VLKDGEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 884333345678889999999999987654
No 272
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.59 E-value=2.8e-07 Score=72.92 Aligned_cols=104 Identities=22% Similarity=0.264 Sum_probs=85.0
Q ss_pred CccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 267 LVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 267 ~v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
.+..++.+++......+.++++ ++.+|+. |..+.+.|+++++++.+++.|+.+|.+... .+++.||+.. .|.+
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~v~~--~Pt~ 113 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEP---ALSTRFRIRS--IPTI 113 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTTCCS--SSEE
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCH---HHHHHCCCCc--cCEE
Confidence 3677888888887766666555 5667776 999999999999999999999999999755 8899999975 6888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
++++.+.....+.|..+.+.|.+||++.+..
T Consensus 114 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 114 MLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 8886444445678899999999999998865
No 273
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.59 E-value=2.7e-07 Score=70.99 Aligned_cols=102 Identities=18% Similarity=0.273 Sum_probs=79.4
Q ss_pred ccccccccccc-cccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 268 VVTLTIHNAQF-VFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 268 v~~l~~~~~~~-~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
+..++.+++.. +...+.+.++ ++.+||. |+...+.+.++++++.+++.|+.+|+++.. .+++.|++.. .|.+
T Consensus 24 v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~v~~--~Pt~ 98 (128)
T 2o8v_B 24 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNP---GTAPKYGIRG--IPTL 98 (128)
T ss_dssp SEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCC---TTSGGGTCCS--SSEE
T ss_pred cEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH---HHHHHcCCCc--cCEE
Confidence 56678888874 3445555544 5667777 999999999999999988999999999754 8889999975 6888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
+++..+...+.+.|..+.+.|.+|++++++
T Consensus 99 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 99 LLFKNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEeCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 887433334557788899999999998763
No 274
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=2.6e-07 Score=70.79 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=83.9
Q ss_pred CCccccccccccccccCCccEEEEEecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 266 PLVVTLTIHNAQFVFQDPRKQLWLFAPAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 266 p~v~~l~~~~~~~~~~~~~~~~i~f~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
..+..++.+++..+.... .++.++.+||. |....+.+.++++++.+ ++.|+.+|++... .+++.|++.. .|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~v~~--~Pt 80 (126)
T 1x5e_A 7 GNVRVITDENWRELLEGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP---GLSGRFIINA--LPT 80 (126)
T ss_dssp CSEEECCTTTHHHHTSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH---HHHHHTTCCS--SSE
T ss_pred CccEEecHHHHHHHhCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH---HHHHHcCCcc--cCE
Confidence 346778888888776553 44556777887 99999999999999986 7999999999754 8899999965 788
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHHHHhcCce
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
++++. +|+...+.|..+.+.|.+||++.+...+
T Consensus 81 ~~~~~-~G~~~~~~G~~~~~~l~~~l~~~~~~~~ 113 (126)
T 1x5e_A 81 IYHCK-DGEFRRYQGPRTKKDFINFISDKEWKSI 113 (126)
T ss_dssp EEEEE-TTEEEECCSCCCHHHHHHHHHTCGGGGS
T ss_pred EEEEe-CCeEEEeecCCCHHHHHHHHHHHhhccC
Confidence 88874 4556678889999999999999876544
No 275
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.57 E-value=3.2e-07 Score=71.43 Aligned_cols=88 Identities=22% Similarity=0.336 Sum_probs=72.9
Q ss_pred CccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCC
Q 015527 283 PRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGEL 360 (405)
Q Consensus 283 ~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~ 360 (405)
+.+++ .++.+||. |....+.+.++++++.+++.|+.+|++... .+++.||+.. .|.+++++.+|+...+.|..
T Consensus 38 ~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~v~~--~Pt~~~~~~~G~~~~~~G~~ 112 (136)
T 2l5l_A 38 DKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQ---ELAGAFGIRS--IPSILFIPMEGKPEMAQGAM 112 (136)
T ss_dssp SSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTTCCS--SCEEEEECSSSCCEEEESCC
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCH---HHHHHcCCCC--CCEEEEECCCCcEEEEeCCC
Confidence 34444 46667777 999999999999999989999999999754 8899999975 78999986656555677889
Q ss_pred CHHHHHHHHHHHhcC
Q 015527 361 TLSSIKSFGEEFLED 375 (405)
Q Consensus 361 ~~~~l~~Fi~~~~~G 375 (405)
+.+.|.+||++.+..
T Consensus 113 ~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 113 PKASFKKAIDEFLLK 127 (136)
T ss_dssp CHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHhhc
Confidence 999999999998866
No 276
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.56 E-value=1.5e-08 Score=76.36 Aligned_cols=64 Identities=11% Similarity=0.075 Sum_probs=46.6
Q ss_pred cEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccH-------hHHHhCCCcccceEEEEeCCeeeeee
Q 015527 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNILAYPTLYLFVAGVRQFQF 143 (405)
Q Consensus 75 ~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~-------~~~~~~~i~~~Pt~~~~~~g~~~~~~ 143 (405)
..++.|+++||++|+...+.+.++..... + +..+|++.++ .+.+.+|+.++|++++ +|+.+..+
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~igg~ 89 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKRG-A--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTSIGGY 89 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCTT-S--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEEEESH
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCcC-c--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEEeCc
Confidence 35777999999999999998876432211 1 7778887764 6888999999998743 78654433
No 277
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.56 E-value=2.6e-07 Score=73.65 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=81.3
Q ss_pred ccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEE
Q 015527 268 VVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 345 (405)
Q Consensus 268 v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~ 345 (405)
+.+++..++......+.++++ |+.+|+. |..+.+.|+++++++.+++.|+.+|.+... .+++.||+.. .|.++
T Consensus 49 ~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~---~l~~~~~i~~--~Pt~~ 123 (155)
T 2ppt_A 49 VAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHP---AVAGRHRIQG--IPAFI 123 (155)
T ss_dssp EEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTST---HHHHHTTCCS--SSEEE
T ss_pred CccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccH---HHHHHcCCCc--CCEEE
Confidence 456777777776655555544 5667776 999999999999999988999999999755 8899999975 68888
Q ss_pred EEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 346 YSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 346 i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
++..+.....+.|..+.++|.+|+++.+..
T Consensus 124 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 124 LFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 886443445578888999999999998865
No 278
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.55 E-value=2.8e-07 Score=67.76 Aligned_cols=100 Identities=11% Similarity=0.096 Sum_probs=78.9
Q ss_pred cccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEE
Q 015527 269 VTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAY 346 (405)
Q Consensus 269 ~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i 346 (405)
.+++.+++......+.+.++ ++.++|. |....+.++++++++.+ +.|+.+|++... .+++.+|+.. .|.+++
T Consensus 2 ~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~---~~~~~~~v~~--~Pt~~~ 75 (104)
T 2e0q_A 2 IHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENP---DIAARYGVMS--LPTVIF 75 (104)
T ss_dssp EECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTTCCS--SCEEEE
T ss_pred eecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCH---HHHHhCCccc--cCEEEE
Confidence 46778888877766665555 4556666 89999999999999988 999999999754 8889999975 688888
Q ss_pred EeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 347 SARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 347 ~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
+..+.....+.|..+.+++.+|+++++.
T Consensus 76 ~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 76 FKDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 8544334557788899999999998864
No 279
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.55 E-value=3.2e-07 Score=67.96 Aligned_cols=102 Identities=20% Similarity=0.233 Sum_probs=78.6
Q ss_pred ccccccccccccc-cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 268 VVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 268 v~~l~~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
+..++.+++.... ..+.+.++ ++.+||. |....+.+.++++++++++.|+.+|++... .+++.||+.. .|.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~ 77 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESP---NVASEYGIRS--IPTI 77 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHHTCCS--SCEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCH---HHHHHCCCCc--CCEE
Confidence 3456777777644 44455555 5556776 999999999999999988999999998754 8889999975 7888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
+++..+...+.+.|..+.+.+.++++++++
T Consensus 78 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 78 MVFKGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp EEESSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred EEEeCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 888544444567788899999999998763
No 280
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.55 E-value=4.7e-07 Score=66.99 Aligned_cols=101 Identities=14% Similarity=0.134 Sum_probs=78.0
Q ss_pred ccccccccccccc-cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 268 VVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 268 v~~l~~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
+..++.+++.... ..+.+.++ ++.++|. |....+.+.++++++.+++.|+.+|++... .+++.||+.. .|.+
T Consensus 4 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~ 78 (107)
T 2i4a_A 4 TLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNP---ETPNAYQVRS--IPTL 78 (107)
T ss_dssp EEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCC---HHHHHTTCCS--SSEE
T ss_pred eeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCH---HHHHhcCCCc--cCEE
Confidence 5667888887544 44555555 5556666 999999999999999989999999999754 8899999975 7888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
+++..+.....+.|..+.+.+.+|+++.+
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 79 MLVRDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred EEEeCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 88843333445778889999999998753
No 281
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.54 E-value=3.8e-07 Score=67.22 Aligned_cols=101 Identities=14% Similarity=0.234 Sum_probs=77.6
Q ss_pred ccccccccccccc-cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 268 VVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 268 v~~l~~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
+..++.+++.... ..+.+.++ ++.++|. |....+.+.++++++++++.|+.+|+++.. .+++.+|+.. .|.+
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~ 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP---GIATQYNIRS--IPTV 76 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTTCCS--SSEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchH---HHHHhCCCCc--ccEE
Confidence 3567778887744 34445555 5556676 999999999999999989999999999754 8899999975 6888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
+++..+.....+.|..+.+.+.+|+++++
T Consensus 77 ~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 77 LFFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred EEEeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 88764333455778889999999998764
No 282
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.54 E-value=5.1e-07 Score=77.02 Aligned_cols=97 Identities=10% Similarity=0.207 Sum_probs=81.4
Q ss_pred CccccCChhHHHHHhccCCeEEEEEEc--CCCCccHHHHHHHhc-cC--CcceEEEec--------CHHHHhhcCCC--C
Q 015527 163 GTYSITTTDEAERILTVESKLVLGFLH--DLEGMESEELAAASK-LH--SDVNFYQTT--------SADVAEFFHIH--P 227 (405)
Q Consensus 163 ~~~~i~~~~~~~~~l~~~~~~~v~f~~--~~~~~~~~~~~~~a~-~~--~~~~f~~~~--------~~~l~~~~~~~--~ 227 (405)
.+..+ +.+.++..++.+..++|.||+ +||+ ..+.|..+|. +. +++.|+.+. +.+++++|+++ .
T Consensus 6 ~v~~L-t~~nF~~~i~~~~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~ 83 (240)
T 2qc7_A 6 GALPL-DTVTFYKVIPKSKFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKES 83 (240)
T ss_dssp TCEEC-CTTHHHHHGGGCSEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGG
T ss_pred CceEC-CHHHHHHHHcCCCCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCC
Confidence 34555 457788888888899999999 9999 8899999883 43 578899887 68899999998 6
Q ss_pred CCCCCeEEEeecCC-CccccccCCCCHHHHHHHHhccC
Q 015527 228 KSKRPALIFLHLEA-GKATPFRHQFTRLAIANFVTHTK 264 (405)
Q Consensus 228 ~~~~p~i~~~~~~~-~~~~~y~g~~~~~~l~~fi~~~~ 264 (405)
+|++++|+.+. .....|.|.++.+.|.+||..+.
T Consensus 84 ---~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 84 ---YPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp ---CSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred ---CCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 89999999865 35778999999999999999875
No 283
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.53 E-value=3.3e-07 Score=69.50 Aligned_cols=103 Identities=12% Similarity=0.088 Sum_probs=80.0
Q ss_pred CCccccccccccccc-cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 266 PLVVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 266 p~v~~l~~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
+.+..++.++|.... ..+.+.++ ++.+||. |+...+.+.++++++.+++.|+.+|++... .+++.||+.. .|
T Consensus 13 ~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~---~l~~~~~v~~--~P 87 (119)
T 1w4v_A 13 TTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT---DLAIEYEVSA--VP 87 (119)
T ss_dssp SEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH---HHHHHTTCCS--SS
T ss_pred eEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH---HHHHHcCCCc--cc
Confidence 456777778877643 44555544 5666776 999999999999999888999999999754 8899999975 68
Q ss_pred EEEEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 343 VIAYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 343 ~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
.++++..+.....+.|..+.+.|.+|++.++
T Consensus 88 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 8888853333455778889999999999876
No 284
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.52 E-value=2.5e-07 Score=70.45 Aligned_cols=103 Identities=20% Similarity=0.208 Sum_probs=80.5
Q ss_pred cccccccccc-ccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 268 VVTLTIHNAQ-FVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 268 v~~l~~~~~~-~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
+..++.+++. .+...+.+.++ ++.+||. |....+.+.++++++.+++.|+.+|++... .+++.|++.. .|.+
T Consensus 5 v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~--~Pt~ 79 (122)
T 3aps_A 5 SIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYP---QTCQKAGIKA--YPSV 79 (122)
T ss_dssp SEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH---HHHHHTTCCS--SSEE
T ss_pred hhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCH---HHHHHcCCCc--cceE
Confidence 5677888874 45555555554 5666776 999999999999999989999999999754 8899999975 7888
Q ss_pred EEEeCCCccccCCCC----CCHHHHHHHHHHHhcC
Q 015527 345 AYSARDAKKYVLNGE----LTLSSIKSFGEEFLED 375 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~----~~~~~l~~Fi~~~~~G 375 (405)
++++.++....+.|. .+.+.|.+|++..++.
T Consensus 80 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 80 KLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred EEEeCCCccceeeccccCcCCHHHHHHHHHHHHHh
Confidence 888764444445543 7999999999998864
No 285
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.52 E-value=3.7e-07 Score=69.91 Aligned_cols=100 Identities=16% Similarity=0.143 Sum_probs=81.7
Q ss_pred cccccccccccccCCc-cEEEEEe-cCC--C-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 269 VTLTIHNAQFVFQDPR-KQLWLFA-PAY--G-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 269 ~~l~~~~~~~~~~~~~-~~~i~f~-~~~--~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
..++..+|........ |+++.|. +|+ . |+.+...+.++|.+|.+++.|+.+|.++ ++.+...||+.. .|.
T Consensus 18 ~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe---~~~la~~ygV~s--iPT 92 (137)
T 2qsi_A 18 TLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEA---ERGLMARFGVAV--CPS 92 (137)
T ss_dssp EEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGG---HHHHHHHHTCCS--SSE
T ss_pred cccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCC---CHHHHHHcCCcc--CCE
Confidence 3677788877665555 7666555 477 5 8999999999999999999999999987 459999999975 799
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
+++++.+...-.+.|..+.+.|.++|+.++
T Consensus 93 lilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 93 LAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 999975444455788889999999999887
No 286
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.51 E-value=1.2e-06 Score=66.47 Aligned_cols=103 Identities=18% Similarity=0.244 Sum_probs=80.4
Q ss_pred CCccccccccccccc-cCCccE-EEEEecCCC-cHHHHHHHHHHHHHhcC-----cEEEEEEEcCCcchhhhhhhhcCCC
Q 015527 266 PLVVTLTIHNAQFVF-QDPRKQ-LWLFAPAYG-SDKVILTFEEVAKALKG-----KLLHVYVEMNSEGVGRRVSQEFGVS 337 (405)
Q Consensus 266 p~v~~l~~~~~~~~~-~~~~~~-~i~f~~~~~-~~~~~~~~~~va~~~~~-----~~~f~~id~~~~~~~~~~~~~~gi~ 337 (405)
+.+..++.+++.... ..+.++ +.++++||. |+.+.+.|.++++++.+ ++.|+.+|++... +++ ++.
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~--~v~ 80 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND----VPD--EIQ 80 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----CSS--CCS
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----ccc--ccC
Confidence 456788888888774 445554 446667887 99999999999999987 7999999998653 444 665
Q ss_pred CCCCcEEEEEeCCCc--cccCCCCCCHHHHHHHHHHHhcCc
Q 015527 338 GNAPRVIAYSARDAK--KYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 338 ~~~~p~i~i~~~~~~--~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
. .|.+++++.++. ...+.|..+.++|.+||++.+..+
T Consensus 81 ~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 81 G--FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp S--SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred c--CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 3 789999887545 567888899999999999987643
No 287
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=6.1e-07 Score=69.36 Aligned_cols=106 Identities=19% Similarity=0.222 Sum_probs=84.0
Q ss_pred CCccccccccccccc-cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhc----CcEEEEEEEcCCcchhhhhhhhcCCCC
Q 015527 266 PLVVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALK----GKLLHVYVEMNSEGVGRRVSQEFGVSG 338 (405)
Q Consensus 266 p~v~~l~~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~----~~~~f~~id~~~~~~~~~~~~~~gi~~ 338 (405)
..+..++..++.... ..+.++++ ++.+||. |+...+.+.++++++. +++.|+.+|++... .+++.|++..
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~v~~ 83 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ---VLASRYGIRG 83 (133)
T ss_dssp CSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC---HHHHHHTCCS
T ss_pred CcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH---HHHHhCCCCe
Confidence 346778888888754 44455544 5667776 9999999999999998 78999999999754 8899999975
Q ss_pred CCCcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhcCc
Q 015527 339 NAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 339 ~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
.|.+++++.+.....+.|..+.++|.+|+++.+...
T Consensus 84 --~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 84 --FPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp --SSEEEEEETTEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred --eCeEEEEeCCCceEEecCCCCHHHHHHHHHHHhhcc
Confidence 789888886444556788899999999999988653
No 288
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.51 E-value=5.5e-07 Score=67.32 Aligned_cols=102 Identities=15% Similarity=0.204 Sum_probs=79.6
Q ss_pred ccccccccccc-cccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 268 VVTLTIHNAQF-VFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 268 v~~l~~~~~~~-~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
+..++.+++.. +...+.+.++ ++.+||. |....+.+.++++++.+++.|+.+|.+... .+++.||+.. .|.+
T Consensus 7 v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~ 81 (112)
T 1t00_A 7 LKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENP---GTAAKYGVMS--IPTL 81 (112)
T ss_dssp CEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTTCCS--SSEE
T ss_pred EEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCH---HHHHhCCCCc--ccEE
Confidence 56778888764 3344555554 5566776 999999999999999888999999999754 8899999975 6888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
+++..+...+.+.|..+.+.+.+|++++++
T Consensus 82 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 82 NVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 887544444567888899999999998875
No 289
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.50 E-value=8.5e-08 Score=75.29 Aligned_cols=70 Identities=19% Similarity=0.213 Sum_probs=49.6
Q ss_pred hhhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCccc---H----hHHHhCCCcccceEEEEe
Q 015527 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~---~----~~~~~~~i~~~Pt~~~~~ 135 (405)
.+.++..+.++ .++| |+++||++|+.+.+.+.++. +.+..+|++.+ + .+++.+++.++|+++ .
T Consensus 39 ~~~~~~~i~~~-~Vvv-f~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i 108 (146)
T 2ht9_A 39 VNQIQETISDN-CVVI-FSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 108 (146)
T ss_dssp HHHHHHHHHHC-SEEE-EECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--E
T ss_pred HHHHHHHhcCC-CEEE-EECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--E
Confidence 45566677555 3433 99999999999999988763 34455666544 3 377889999999984 4
Q ss_pred CCeeeee
Q 015527 136 AGVRQFQ 142 (405)
Q Consensus 136 ~g~~~~~ 142 (405)
+|+.+..
T Consensus 109 ~G~~igG 115 (146)
T 2ht9_A 109 NGTFIGG 115 (146)
T ss_dssp TTEEEES
T ss_pred CCEEEeC
Confidence 7865443
No 290
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.49 E-value=3.1e-07 Score=69.29 Aligned_cols=101 Identities=12% Similarity=0.128 Sum_probs=78.5
Q ss_pred CCcccccccccccccc--CCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCC
Q 015527 266 PLVVTLTIHNAQFVFQ--DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAP 341 (405)
Q Consensus 266 p~v~~l~~~~~~~~~~--~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~ 341 (405)
+.....+.++|..++. .++++++ ++.+||. |+...+.+.++++++.+ +.|+.+|++... .+++.||+.. .
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~---~l~~~~~v~~--~ 85 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQ---DVASECEVKS--M 85 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTH---HHHHHTTCCS--S
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH---HHHHHcCCcc--c
Confidence 3455666777777766 4555544 6667887 99999999999999988 999999999754 8999999975 7
Q ss_pred cEEEEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 342 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 342 p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
|.++++..+.....+.|. +.+.|.+||++++
T Consensus 86 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 86 PTFQFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp SEEEEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred cEEEEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 888888544444556777 9999999998764
No 291
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.49 E-value=1.1e-06 Score=67.88 Aligned_cols=108 Identities=16% Similarity=0.259 Sum_probs=83.6
Q ss_pred CCCccccccccccccccC-CccEEE-EEecCCC-cHHHHHHHHHHHHHhc--CcEEEEEEEcCCcchhhhhhhhcCCCCC
Q 015527 265 HPLVVTLTIHNAQFVFQD-PRKQLW-LFAPAYG-SDKVILTFEEVAKALK--GKLLHVYVEMNSEGVGRRVSQEFGVSGN 339 (405)
Q Consensus 265 ~p~v~~l~~~~~~~~~~~-~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~--~~~~f~~id~~~~~~~~~~~~~~gi~~~ 339 (405)
.+.+..++..++...... +.++++ ++.+||. |..+.+.|.++++++. +++.|+.+|++... .+++.|++..
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~- 81 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAND---ITNDQYKVEG- 81 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSC---CCCSSCCCSS-
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCH---HHHhhcCCCc-
Confidence 456788898998887654 455555 5557777 9999999999999998 56999999998754 6778899875
Q ss_pred CCcEEEEEeCCCc--cccCC-CCCCHHHHHHHHHHHhcCce
Q 015527 340 APRVIAYSARDAK--KYVLN-GELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 340 ~~p~i~i~~~~~~--~y~~~-~~~~~~~l~~Fi~~~~~Gkl 377 (405)
.|.+++++.++. ...+. +..+.+.|.+||+..+....
T Consensus 82 -~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 82 -FPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp -SSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred -CCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 789888876432 23456 56899999999999987654
No 292
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.48 E-value=4.1e-07 Score=71.09 Aligned_cols=105 Identities=21% Similarity=0.235 Sum_probs=84.4
Q ss_pred CccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc---EEEEEEEcCCcchhhhhhhhcCCCCCCC
Q 015527 267 LVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK---LLHVYVEMNSEGVGRRVSQEFGVSGNAP 341 (405)
Q Consensus 267 ~v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~---~~f~~id~~~~~~~~~~~~~~gi~~~~~ 341 (405)
.+..++..++......+.++++ ++.+||. |+.+...|.++++++.++ +.|+.+|++... .+++.|++.. .
T Consensus 18 ~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~v~~--~ 92 (140)
T 2dj1_A 18 GVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS---MLASKFDVSG--Y 92 (140)
T ss_dssp TEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH---HHHHHTTCCS--S
T ss_pred CCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH---HHHHHCCCCc--c
Confidence 3677888888887776665555 4556776 999999999999999875 999999998754 8899999974 7
Q ss_pred cEEEEEeCCCccccCCCCCCHHHHHHHHHHHhcCce
Q 015527 342 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 342 p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
|.++++. +|+...+.|..+.+.|.+|+++.+....
T Consensus 93 Pt~~~~~-~G~~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 93 PTIKILK-KGQAVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp SEEEEEE-TTEEEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred CeEEEEE-CCcEEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 8888885 4556668889999999999999987644
No 293
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.47 E-value=6e-07 Score=75.31 Aligned_cols=101 Identities=15% Similarity=0.108 Sum_probs=72.6
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCC-ChhHh-----hhHHHHHHHHHHccCCcEEEEEeCc----------------
Q 015527 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW-CYWSK-----KLAPEFAAAAKMLKGEADLVMVDAY---------------- 114 (405)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~~-C~~C~-----~~~~~~~~~~~~~~~~v~~~~v~~~---------------- 114 (405)
.+.+.+++.++..-..+++++|+||+.| |++|. .+++.|.+. + .++.++.|+.+
T Consensus 32 tL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~gv~VvgIS~Ds~~~~~~f~~~~gl~~ 107 (224)
T 3keb_A 32 MLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-PHLKLIVITVDSPSSLARARHEHGLPN 107 (224)
T ss_dssp EEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-TTSEEEEEESSCHHHHHHHHHHHCCTT
T ss_pred EEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-CCCEEEEEECCCHHHHHHHHHHcCCCC
Confidence 3445555444322235789999999998 99999 888888776 5 45777777653
Q ss_pred ------c-cHhHHHhCCCcc---------cceEEEEe-CCeeeeeec-----CCCCHHHHHHHHHhhhc
Q 015527 115 ------L-EKDLAKEYNILA---------YPTLYLFV-AGVRQFQFF-----GERTRDVISAWVREKMT 161 (405)
Q Consensus 115 ------~-~~~~~~~~~i~~---------~Pt~~~~~-~g~~~~~~~-----g~~~~~~l~~~i~~~~~ 161 (405)
. +..+++.||+.. .|++++++ +|++...+. +..+.+++.+.|.....
T Consensus 108 fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 108 IALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp CEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHH
T ss_pred ceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhh
Confidence 2 357888999864 79999998 897776543 45678888888876653
No 294
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.47 E-value=6e-07 Score=69.96 Aligned_cols=102 Identities=13% Similarity=0.072 Sum_probs=76.7
Q ss_pred ccccc-cccccccc--cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 268 VVTLT-IHNAQFVF--QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 268 v~~l~-~~~~~~~~--~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
+..++ .++|+... ....++++ |+++||. |+.+.+.|.++|.++.+++.|+.+|.++.+ ++...|++.. .|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~---e~a~~y~V~s--iP 97 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVP---DFNTMYELYD--PV 97 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCC---TTTTTTTCCS--SE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCH---HHHHHcCCCC--CC
Confidence 33344 35665443 24445555 6778988 999999999999999999999999999865 9999999974 78
Q ss_pred EEEEEeCCCccc----------cCCCCCC-HHHHHHHHHHHhcC
Q 015527 343 VIAYSARDAKKY----------VLNGELT-LSSIKSFGEEFLED 375 (405)
Q Consensus 343 ~i~i~~~~~~~y----------~~~~~~~-~~~l~~Fi~~~~~G 375 (405)
.++++.. |..- ++.|..+ .+.|.++|+.+++|
T Consensus 98 T~~fFk~-G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 98 SVMFFYR-NKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp EEEEEET-TEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEC-CEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHH
Confidence 9887764 3332 5677666 88888888877655
No 295
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.46 E-value=5e-07 Score=68.55 Aligned_cols=105 Identities=11% Similarity=0.106 Sum_probs=81.4
Q ss_pred CCcccccccccccc-ccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 266 PLVVTLTIHNAQFV-FQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 266 p~v~~l~~~~~~~~-~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
..+..++..++... ...+.+.++ ++.++|. |....+.+.+++.++.+++.|+.+|++... .+++.+|+.. .|
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~i~~--~P 86 (121)
T 2i1u_A 12 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP---ETARNFQVVS--IP 86 (121)
T ss_dssp CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTTCCS--SS
T ss_pred ccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCH---HHHHhcCCCc--CC
Confidence 34677888888753 444555555 5556676 999999999999999988999999999754 8899999975 68
Q ss_pred EEEEEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 343 VIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 343 ~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.++++..+.....+.|..+.+.+.+||+.++.+
T Consensus 87 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 87 TLILFKDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred EEEEEECCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 888886433345578888999999999987765
No 296
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.46 E-value=6.6e-07 Score=75.31 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=86.6
Q ss_pred CCccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 266 PLVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 266 p~v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
+.+..++..++......+.++++ ++.+||. |....+.|.++++++.+++.|+.+|++... .+++.+|+.. .|.
T Consensus 97 ~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~v~~--~Pt 171 (210)
T 3apq_A 97 PEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDR---MLCRMKGVNS--YPS 171 (210)
T ss_dssp TTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH---HHHHHTTCCS--SSE
T ss_pred CceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccH---HHHHHcCCCc--CCe
Confidence 44677888888777666665544 6667887 999999999999999999999999999754 8899999975 788
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHHHHhcCce
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
++++..+.....+.|..+.+.|.+||++.+...+
T Consensus 172 ~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 172 LFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp EEEECTTSCCEECCSCCCHHHHHHHHHHHHHCCS
T ss_pred EEEEECCCceeEecCCCCHHHHHHHHHHhCcccc
Confidence 8888544445668889999999999999987754
No 297
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.46 E-value=8.8e-07 Score=75.20 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=87.2
Q ss_pred CCccccccccccc-cccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 266 PLVVTLTIHNAQF-VFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 266 p~v~~l~~~~~~~-~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
+.+..+|.++|.. +...+.++++ ++.+||. |+...+.|.++++++++++.|+.+|++... .+++.|++.. .|
T Consensus 12 ~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~---~l~~~~~v~~--~P 86 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP---GTAPKYGIRG--IP 86 (222)
T ss_dssp CCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCT---TTGGGGTCCS--BS
T ss_pred CCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCH---HHHHHcCCCc--CC
Confidence 3467888899887 4555665554 6778887 999999999999999999999999999754 8889999975 78
Q ss_pred EEEEEeCCCccccCCCCCCHHHHHHHHHHHhcCce
Q 015527 343 VIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 343 ~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
.+++++.+.....+.|..+.+.+.+|+++.+.+..
T Consensus 87 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 87 TLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCSC
T ss_pred EEEEEECCeEEEEeccccChHHHHHHHHhhccccc
Confidence 88888744444467888999999999999998765
No 298
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.46 E-value=6.4e-07 Score=66.16 Aligned_cols=96 Identities=9% Similarity=0.089 Sum_probs=65.9
Q ss_pred ccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeC
Q 015527 272 TIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR 349 (405)
Q Consensus 272 ~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~ 349 (405)
+.+++......+.++++ ++++||. |+...+.+.++++++. ++.|+.+|.+... .+++.||+.. .|.+++++.
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~---~l~~~~~v~~--~Pt~~~~~~ 80 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQ---EIAGRYAVFT--GPTVLLFYN 80 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC------------CC--CCEEEEEET
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCH---HHHHhcCCCC--CCEEEEEeC
Confidence 45566666666665555 5667877 9999999999999995 6999999999755 8899999975 788888864
Q ss_pred CCccccCCCCCCHHHHHHHHHHHh
Q 015527 350 DAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 350 ~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
+.....+.|..+.+.|.+|+++++
T Consensus 81 G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 81 GKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp TEEEEEEESSCCHHHHHHHHHTTC
T ss_pred CeEEEEEeCCcCHHHHHHHHHHhh
Confidence 333455678889999999998765
No 299
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.45 E-value=4.8e-07 Score=68.44 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=81.6
Q ss_pred ccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhc---CcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 268 VVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALK---GKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 268 v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~---~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
+..++.+++......+.++++ ++.+||. |..+.+.+.+++++++ .++.|+.+|++... .+++.+|+.. .|
T Consensus 9 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~v~~--~P 83 (120)
T 1mek_A 9 VLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES---DLAQQYGVRG--YP 83 (120)
T ss_dssp EEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC---SSHHHHTCCS--SS
T ss_pred cEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH---HHHHHCCCCc--cc
Confidence 567888888887776665544 5667776 9999999999999987 36999999998754 8889999975 78
Q ss_pred EEEEEeCCCcc--ccCCCCCCHHHHHHHHHHHhcC
Q 015527 343 VIAYSARDAKK--YVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 343 ~i~i~~~~~~~--y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.++++..+... ..+.|..+.+.|.+|+++.++.
T Consensus 84 t~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 84 TIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp EEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred EEEEEeCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 88888643322 5678889999999999988765
No 300
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.45 E-value=8e-07 Score=66.20 Aligned_cols=101 Identities=20% Similarity=0.204 Sum_probs=79.6
Q ss_pred CccccccccccccccCCccEEEEEecCCC-cHHHHHHHHHHHHHhc---CcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 267 LVVTLTIHNAQFVFQDPRKQLWLFAPAYG-SDKVILTFEEVAKALK---GKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 267 ~v~~l~~~~~~~~~~~~~~~~i~f~~~~~-~~~~~~~~~~va~~~~---~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
.+..++.+++.........++.++.+||. |....+.+.++++++. .++.|+.+|++... .+++.|++.. .|
T Consensus 6 ~v~~l~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~v~~--~P 80 (111)
T 3uvt_A 6 TVLALTENNFDDTIAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER---NICSKYSVRG--YP 80 (111)
T ss_dssp CSEECCTTTHHHHHHSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH---HHHHHTTCCS--SS
T ss_pred cceEcChhhHHHHhcCCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH---hHHHhcCCCc--cc
Confidence 46778888888877733234446667776 9999999999999886 46999999999754 8899999975 78
Q ss_pred EEEEEeCCCccccCCCCCCHHHHHHHHHHH
Q 015527 343 VIAYSARDAKKYVLNGELTLSSIKSFGEEF 372 (405)
Q Consensus 343 ~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~ 372 (405)
.++++..+.....+.|..+.+.|.+|+++.
T Consensus 81 t~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 81 TLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 888886544455678889999999999863
No 301
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.43 E-value=1.2e-06 Score=75.02 Aligned_cols=98 Identities=12% Similarity=0.154 Sum_probs=79.4
Q ss_pred CCccccCChhHHHHHhccCCeEEEEEE--cCCCCccHHHHHHHh-cc---CCcceEEEec--------CHHHHhhcCCC-
Q 015527 162 LGTYSITTTDEAERILTVESKLVLGFL--HDLEGMESEELAAAS-KL---HSDVNFYQTT--------SADVAEFFHIH- 226 (405)
Q Consensus 162 ~~~~~i~~~~~~~~~l~~~~~~~v~f~--~~~~~~~~~~~~~~a-~~---~~~~~f~~~~--------~~~l~~~~~~~- 226 (405)
..+..+ +...++.+++.+..++|.|| ++||+ ..+.|..+| .+ .+++.|+.+. +.+++++|++.
T Consensus 16 ~~v~~L-t~~nF~~vi~~~~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~ 93 (248)
T 2c0g_A 16 TGCVDL-DELSFEKTVERFPYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDD 93 (248)
T ss_dssp TTCEEC-CTTTHHHHHTTSSEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCT
T ss_pred CCcEEC-CHHHHHHHHhcCCCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCc
Confidence 345556 45777778888889999999 99999 889999988 34 3578888764 57899999998
Q ss_pred -CCCCCCeEEEeecCC-Cccccc--cCCCCHHHHHHHHhccCC
Q 015527 227 -PKSKRPALIFLHLEA-GKATPF--RHQFTRLAIANFVTHTKH 265 (405)
Q Consensus 227 -~~~~~p~i~~~~~~~-~~~~~y--~g~~~~~~l~~fi~~~~~ 265 (405)
. +|++++|+ +. .....| .|.++.+.|.+||..+.-
T Consensus 94 ~~---~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 94 KN---FPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp TS---CCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CC---CCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 6 89999999 65 346778 899999999999998753
No 302
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.42 E-value=1.3e-06 Score=67.14 Aligned_cols=102 Identities=9% Similarity=0.049 Sum_probs=76.9
Q ss_pred CCCccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 265 HPLVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 265 ~p~v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
.|.+...+...+......++++++ ++.+||. |+...+.+.++++++++++.|+.+|++... .+++.||+.. .|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~---~l~~~~~v~~--~P 98 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE---SLARKFSVKS--LP 98 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH---HHHHHTTCCS--SS
T ss_pred CCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH---HHHHHcCCCC--cC
Confidence 344444455545555555565544 6667887 999999999999999989999999999754 8899999975 78
Q ss_pred EEEEEeCCCccccCCCCCCHHHHHHHHHH
Q 015527 343 VIAYSARDAKKYVLNGELTLSSIKSFGEE 371 (405)
Q Consensus 343 ~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~ 371 (405)
.+++++.+.....+.|..+.++|.+|+++
T Consensus 99 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 99 TIILLKNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEEEETTEEEEEESSCCCHHHHHHHHTT
T ss_pred EEEEEECCEEEEEecCCCCHHHHHHHHHh
Confidence 88888544444567888999999999875
No 303
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.41 E-value=1e-06 Score=64.97 Aligned_cols=99 Identities=9% Similarity=0.151 Sum_probs=74.0
Q ss_pred ccccc-cccccccc--CCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 269 VTLTI-HNAQFVFQ--DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 269 ~~l~~-~~~~~~~~--~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
.+++. +++..... .+.+.++ ++.++|. |....+.++++++++++++.|+.+|.+... .+++.+|+.. .|.
T Consensus 3 ~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt 77 (106)
T 1xwb_A 3 YQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE---DIAMEYNISS--MPT 77 (106)
T ss_dssp EECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH---HHHHHTTCCS--SSE
T ss_pred eecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchH---HHHHHcCCCc--ccE
Confidence 34555 56666555 4455554 5556766 999999999999999888999999999754 8899999975 688
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
++++..+.....+.| .+.+.+.+|+++++
T Consensus 78 ~~~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 78 FVFLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEEEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred EEEEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 888764333445667 78899999998753
No 304
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.39 E-value=3.3e-07 Score=70.48 Aligned_cols=103 Identities=9% Similarity=0.062 Sum_probs=82.7
Q ss_pred ccccccccccccccCCccEEEEEe-cC--CC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 268 VVTLTIHNAQFVFQDPRKQLWLFA-PA--YG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 268 v~~l~~~~~~~~~~~~~~~~i~f~-~~--~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
+..++..+|........|+++.|. ++ +. |+.+...+.++|.+|.++ +.|+.+|.++ ++.+...|||.. .|
T Consensus 19 ~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe---~~~lA~~ygV~s--IP 93 (140)
T 2qgv_A 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ---SEAIGDRFGAFR--FP 93 (140)
T ss_dssp CEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH---HHHHHHHHTCCS--SS
T ss_pred CccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC---CHHHHHHcCCcc--CC
Confidence 457788888876655556666554 45 44 889999999999999999 9999999997 459999999975 79
Q ss_pred EEEEEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 343 VIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 343 ~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.+++++.+...-.+.|..+.+.|.+||+.+++.
T Consensus 94 TlilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~ 126 (140)
T 2qgv_A 94 ATLVFTGGNYRGVLNGIHPWAELINLMRGLVEP 126 (140)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEEECCEEEEEEecCCCHHHHHHHHHHHhcC
Confidence 999997544445678888999999999998855
No 305
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.39 E-value=1.7e-06 Score=71.64 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=37.4
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~ 113 (405)
.+++++|.|++.||++|+.+.|.+.++.+.+.+++.|..+.+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 357899999999999999999999999999987788877765
No 306
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.39 E-value=1.4e-07 Score=71.27 Aligned_cols=71 Identities=11% Similarity=0.228 Sum_probs=50.7
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHhhh-HHHHHHHHHHccCCcEEEEEeCcccH-------hHHHhCCCcccceEEEEe
Q 015527 64 KNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNILAYPTLYLFV 135 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~~C~~C~~~-~~~~~~~~~~~~~~v~~~~v~~~~~~-------~~~~~~~i~~~Pt~~~~~ 135 (405)
+.+++.+...+ ++.|+++||++|+.. .+.+.+... ..+.+..+|++.++ .+.+.+|+.++|++ |.
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi 88 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YI 88 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 44556665443 556999999999998 877765431 13778888887764 57888999999987 55
Q ss_pred CCeeee
Q 015527 136 AGVRQF 141 (405)
Q Consensus 136 ~g~~~~ 141 (405)
+|+.+.
T Consensus 89 ~g~~ig 94 (118)
T 3c1r_A 89 NGKHIG 94 (118)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 785543
No 307
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.39 E-value=8e-07 Score=67.97 Aligned_cols=101 Identities=10% Similarity=0.084 Sum_probs=78.1
Q ss_pred cccccc-ccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 268 VVTLTI-HNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 268 v~~l~~-~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
+.+++. +++......+.+.++ ++.+||. |....+.|.++++++. ++.|+.+|++... .+++.|++.. .|.+
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~---~l~~~~~v~~--~Pt~ 94 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNS---EIVSKCRVLQ--LPTF 94 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCH---HHHHHTTCCS--SSEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCH---HHHHHcCCCc--ccEE
Confidence 567777 788777766665544 5667776 9999999999999995 5999999999754 8899999975 7888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
+++..+.....+.| .+.+.|.+||+++++.
T Consensus 95 ~i~~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 95 IIARSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred EEEeCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 88754333344667 6889999999998754
No 308
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.38 E-value=8.9e-07 Score=66.13 Aligned_cols=96 Identities=14% Similarity=0.178 Sum_probs=73.6
Q ss_pred cccccccccC----CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEE
Q 015527 273 IHNAQFVFQD----PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAY 346 (405)
Q Consensus 273 ~~~~~~~~~~----~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i 346 (405)
.+++...... +.+.++ ++.+||. |....+.+.+++.++.+++.|+.+|.+... .+++.||+.. .|.+++
T Consensus 10 ~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~--~Pt~~~ 84 (112)
T 1ep7_A 10 KAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVA---AVAEAAGITA--MPTFHV 84 (112)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTH---HHHHHHTCCB--SSEEEE
T ss_pred HHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchH---HHHHHcCCCc--ccEEEE
Confidence 4556555543 455544 5666776 999999999999999988999999998754 8899999975 688888
Q ss_pred EeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 347 SARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 347 ~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
+..+.....+.|. +.++|.+|++.+++
T Consensus 85 ~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 85 YKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 7543334556776 89999999999875
No 309
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.37 E-value=8.7e-07 Score=63.65 Aligned_cols=70 Identities=9% Similarity=0.081 Sum_probs=51.6
Q ss_pred EEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc-----cc----HhHHHhCCCcccceEEEEeCCeeeeeecCC
Q 015527 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----LE----KDLAKEYNILAYPTLYLFVAGVRQFQFFGE 146 (405)
Q Consensus 76 ~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~-----~~----~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~ 146 (405)
.++.|+++||++|++..+.+.++. +.+-.+|++ +. +++.+.+++.++|++++ +|+ +.|.
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~----~i~G 80 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK----HVLG 80 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE----EEES
T ss_pred eEEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE----EEeC
Confidence 366799999999999998888753 333445554 33 56677889999999876 773 3345
Q ss_pred CCHHHHHHHHH
Q 015527 147 RTRDVISAWVR 157 (405)
Q Consensus 147 ~~~~~l~~~i~ 157 (405)
.+.+.|.++|.
T Consensus 81 ~~~~~l~~~l~ 91 (92)
T 3ic4_A 81 YNEEKLKELIR 91 (92)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHhc
Confidence 68999998875
No 310
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.36 E-value=1e-06 Score=73.13 Aligned_cols=42 Identities=17% Similarity=0.322 Sum_probs=35.8
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~ 113 (405)
.++++++.||..||++|+.+.|.+.++.+.+++++.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 357899999999999999999999999999877676665553
No 311
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.36 E-value=2.8e-06 Score=64.92 Aligned_cols=103 Identities=9% Similarity=0.111 Sum_probs=77.8
Q ss_pred cccccccccc-----ccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEE--cCCcchhhhhhhhcCCCC
Q 015527 268 VVTLTIHNAQ-----FVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVE--MNSEGVGRRVSQEFGVSG 338 (405)
Q Consensus 268 v~~l~~~~~~-----~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id--~~~~~~~~~~~~~~gi~~ 338 (405)
+..++..++. .....++++++ ++.+||. |....+.+.++++++++++.|+.+| .+. +..+++.||+..
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~---~~~~~~~~~v~~ 82 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEK---NIDLAYKYDANI 82 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSH---HHHHHHHTTCCS
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCc---hHHHHHHcCCcc
Confidence 3445555554 33444555544 5667777 9999999999999998889999999 665 448889999965
Q ss_pred CCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 339 NAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 339 ~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.|.+++++.+|+ .+.+.|..+.++|.+||+..+..
T Consensus 83 --~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 83 --VPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp --SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred --eeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 789999985444 45577889999999999998765
No 312
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.35 E-value=1.2e-06 Score=66.48 Aligned_cols=103 Identities=10% Similarity=0.157 Sum_probs=78.4
Q ss_pred CCccccccccccccccC----CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCC
Q 015527 266 PLVVTLTIHNAQFVFQD----PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGN 339 (405)
Q Consensus 266 p~v~~l~~~~~~~~~~~----~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~ 339 (405)
+.+..++.+++...... +.+.++ ++.+||. |....+.|.++++++.+ +.|+.+|++... .+++.||+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~---~~~~~~~v~~- 87 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELK---PIAEQFSVEA- 87 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTTCCS-
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCH---HHHHHcCCCc-
Confidence 45666677777765543 445544 5666776 99999999999999988 999999999754 8899999975
Q ss_pred CCcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 340 APRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 340 ~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.|.++++..+.....+.|.. .+.|.+|++.++.+
T Consensus 88 -~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 88 -MPTFLFMKEGDVKDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp -SSEEEEEETTEEEEEEESSC-HHHHHHHHHHHHSC
T ss_pred -ccEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHhcc
Confidence 68888875433345567766 99999999998865
No 313
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.33 E-value=6.2e-07 Score=70.12 Aligned_cols=105 Identities=6% Similarity=0.034 Sum_probs=70.4
Q ss_pred CccccccccccccccCCccEEEEEe-cC--CC-cHHHHHHHHHHHHHhcCcEE--EEEEEcCCcchhhhhhhhcCCCCCC
Q 015527 267 LVVTLTIHNAQFVFQDPRKQLWLFA-PA--YG-SDKVILTFEEVAKALKGKLL--HVYVEMNSEGVGRRVSQEFGVSGNA 340 (405)
Q Consensus 267 ~v~~l~~~~~~~~~~~~~~~~i~f~-~~--~~-~~~~~~~~~~va~~~~~~~~--f~~id~~~~~~~~~~~~~~gi~~~~ 340 (405)
-+..++.++|..........+++|. .+ +. |+...+.|.++|+++ +++. |+.+|.+.. ..+++.||+..
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~---~~la~~~~V~~-- 91 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQS---EAIGDRFNVRR-- 91 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHH---HHHHHTTTCCS--
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCC---HHHHHhcCCCc--
Confidence 4567888898887776555555554 44 33 889999999999999 8888 999999864 48899999975
Q ss_pred CcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhcCce
Q 015527 341 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 341 ~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
.|.++++..+.....+.|..+.+.|.+||+..++...
T Consensus 92 iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 92 FPATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp SSEEEEESCC----CEESCCCHHHHHHHHHHHHC---
T ss_pred CCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhcccc
Confidence 7888888543334557788899999999999987643
No 314
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.32 E-value=1.2e-06 Score=65.56 Aligned_cols=100 Identities=13% Similarity=0.215 Sum_probs=77.1
Q ss_pred CccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 267 LVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 267 ~v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
....++..++......+.+.++ ++.+||. |....+.+.++++++.+ +.|+.+|.+... .+++.||+.. .|.+
T Consensus 10 ~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~---~~~~~~~v~~--~Pt~ 83 (112)
T 1syr_A 10 VKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVS---EVTEKENITS--MPTF 83 (112)
T ss_dssp CEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTH---HHHHHTTCCS--SSEE
T ss_pred EEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCH---HHHHHcCCCc--ccEE
Confidence 3466677788877776665554 5666776 99999999999999875 999999999754 7889999975 6888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
+++..+.....+.|. +.+.|.+||++++
T Consensus 84 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 887643333456777 9999999998765
No 315
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.31 E-value=1.4e-06 Score=66.23 Aligned_cols=101 Identities=14% Similarity=0.199 Sum_probs=76.6
Q ss_pred cccccc-ccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcchhhhhhhhcCCCCCCCcE
Q 015527 268 VVTLTI-HNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEGVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 268 v~~l~~-~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~~~~~~~~~~gi~~~~~p~ 343 (405)
+..++. +++......+.+.++ ++.+||. |....+.+.++++++.++ +.|+.+|++... .+++.||+.. .|.
T Consensus 17 ~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~---~~~~~~~v~~--~Pt 91 (121)
T 2j23_A 17 VQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS---QIAQEVGIRA--MPT 91 (121)
T ss_dssp EEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH---HHHHHHTCCS--SSE
T ss_pred eEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH---HHHHHcCCCc--ccE
Confidence 444443 667766666665544 5667776 999999999999999876 999999999754 8889999975 788
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
+++++.+.....+.|. +.++|.+||+++++
T Consensus 92 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 92 FVFFKNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp EEEEETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred EEEEECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 8888644334556776 89999999998763
No 316
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.31 E-value=1.8e-06 Score=63.71 Aligned_cols=67 Identities=22% Similarity=0.363 Sum_probs=49.3
Q ss_pred hhHHHHHcCCCcEEEEEec-----CCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHh----HHHhCCCcccceEEEE
Q 015527 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLF 134 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a-----~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~i~~~Pt~~~~ 134 (405)
+.+++.+..++ ++| |++ +||++|+...+.+.+. ++.|..+|++.++. +.+.+|+.++|++ |
T Consensus 8 ~~~~~~i~~~~-vvv-f~~g~~~~~~C~~C~~~~~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~ 77 (105)
T 2yan_A 8 ERLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKAYSNWPTYPQL--Y 77 (105)
T ss_dssp HHHHHHHTSSS-EEE-EESBCSSSBCTTHHHHHHHHHHHH------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--E
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCCCccHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE--E
Confidence 45666776554 444 776 9999999999988775 36678888888766 4455799999998 4
Q ss_pred eCCeee
Q 015527 135 VAGVRQ 140 (405)
Q Consensus 135 ~~g~~~ 140 (405)
.+|+.+
T Consensus 78 i~g~~i 83 (105)
T 2yan_A 78 VKGELV 83 (105)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 578543
No 317
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.30 E-value=1.1e-06 Score=68.93 Aligned_cols=81 Identities=16% Similarity=0.237 Sum_probs=61.6
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEe--C------------------------------------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD--A------------------------------------ 113 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~--~------------------------------------ 113 (405)
+++.+++.|..++|++|+++.+.+.++ + ++.+.-.. .
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~-~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T-DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C-SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C-ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 467899999999999999999988654 3 34443322 1
Q ss_pred --------cccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 114 --------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 114 --------~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+++..+++++||+++||+++ .+|+ .+.|..+.+.|.++|.+...
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR---TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC---EEESCCCTTHHHHHHHHTSC
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE---EeeCCCCHHHHHHHHHHHHH
Confidence 11345678899999999988 6774 47799999999999987663
No 318
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.30 E-value=2.5e-06 Score=60.83 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=56.3
Q ss_pred EEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhC-----CCcccceEEEEeCCeeeeeecCCCCHH
Q 015527 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEY-----NILAYPTLYLFVAGVRQFQFFGERTRD 150 (405)
Q Consensus 76 ~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~-----~i~~~Pt~~~~~~g~~~~~~~g~~~~~ 150 (405)
.++.|..+||++|++....+.+. ++.|-.+|++++++..+.+ |.+++|+++ +.+|... +..+.+
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~~l----~~~~~~ 73 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGSTL----TNPSAD 73 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSCEE----ESCCHH
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCEEE----eCCCHH
Confidence 46779999999999998777652 5788899998887654432 788999975 4566433 235788
Q ss_pred HHHHHHHhhhc
Q 015527 151 VISAWVREKMT 161 (405)
Q Consensus 151 ~l~~~i~~~~~ 161 (405)
+|.++|.+..+
T Consensus 74 el~~~L~el~g 84 (92)
T 2lqo_A 74 EVKAKLVKIAG 84 (92)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99999988875
No 319
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.30 E-value=1.9e-06 Score=63.45 Aligned_cols=94 Identities=12% Similarity=0.133 Sum_probs=71.9
Q ss_pred ccccccccc--CCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEe
Q 015527 273 IHNAQFVFQ--DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSA 348 (405)
Q Consensus 273 ~~~~~~~~~--~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~ 348 (405)
.+++..... .+.+.++ ++.+||. |....+.+.++++++++ +.|+.+|+++.. .+++.+|+.. .|.++++.
T Consensus 8 ~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~---~~~~~~~v~~--~Pt~~~~~ 81 (105)
T 3m9j_A 8 KTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQ---DVASESEVKS--MPTFQFFK 81 (105)
T ss_dssp HHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCH---HHHHHTTCCB--SSEEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhH---HHHHHcCCCc--CcEEEEEE
Confidence 445555554 3445554 5667776 99999999999999987 999999999754 8899999975 78888886
Q ss_pred CCCccccCCCCCCHHHHHHHHHHHh
Q 015527 349 RDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 349 ~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
.+.....+.|. +.+++.+|+++++
T Consensus 82 ~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 82 KGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 54444557777 9999999998864
No 320
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.29 E-value=2.1e-06 Score=68.18 Aligned_cols=121 Identities=14% Similarity=0.112 Sum_probs=80.0
Q ss_pred ccccc-cccccccccC--CccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 268 VVTLT-IHNAQFVFQD--PRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 268 v~~l~-~~~~~~~~~~--~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
+..++ .+++..+... +.+++ .++.+||. |....+.+.++++++. ++.|+.+|++... .+++.||+.. .|
T Consensus 14 v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~---~l~~~~~v~~--~P 87 (153)
T 2wz9_A 14 VEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVP---EVSEKYEISS--VP 87 (153)
T ss_dssp SEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---HHHHHTTCCS--SS
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCH---HHHHHcCCCC--CC
Confidence 44444 4566665555 44544 46667777 9999999999999984 5999999999754 8899999975 78
Q ss_pred EEEEEeCCCcc-ccCCCCCCHHHHHHHHHHHhcCceeeecccCchhhhcCccCccccee
Q 015527 343 VIAYSARDAKK-YVLNGELTLSSIKSFGEEFLEDKLLNQSDQISETILKLPSQSRASYQ 400 (405)
Q Consensus 343 ~i~i~~~~~~~-y~~~~~~~~~~l~~Fi~~~~~Gkl~~kse~iPe~~~~~~~~~~~~~~ 400 (405)
.+++++ +|+. ..+.| .+.+.|.+||++++.... .+.|..+..+-..||++..
T Consensus 88 t~~~~~-~G~~~~~~~G-~~~~~l~~~i~~~l~~~~----~~~~~~~~~l~~~~f~~~~ 140 (153)
T 2wz9_A 88 TFLFFK-NSQKIDRLDG-AHAPELTKKVQRHASSGS----FLPSAKVKVDTDPNSSSVD 140 (153)
T ss_dssp EEEEEE-TTEEEEEEES-SCHHHHHHHHHHHSCTTS----SCSCCCCCCC---------
T ss_pred EEEEEE-CCEEEEEEeC-CCHHHHHHHHHHHhcccc----CCCccccccCCCCChhhHH
Confidence 988888 4544 34556 578899999999987622 2233444555555665543
No 321
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.28 E-value=4.6e-06 Score=67.84 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=60.4
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHc--cCCcEEEEEeCcc----------------------------------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML--KGEADLVMVDAYL---------------------------------- 115 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~--~~~v~~~~v~~~~---------------------------------- 115 (405)
.++++++.|+..||++|+.+.|.+.++.+++ .++|.+...+..-
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~~ 105 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQ 105 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHcC
Confidence 4577899999999999999999999998888 5556555443210
Q ss_pred --------------------------------cHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHH
Q 015527 116 --------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVR 157 (405)
Q Consensus 116 --------------------------------~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (405)
+..+++++||.++||+++ +|+ .+.|..+.+.|.+.|.
T Consensus 106 ~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv--ng~---~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 106 DEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII--GEY---IFDESVTEEELRGYIE 174 (175)
T ss_dssp HHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE--TTE---EECTTCCHHHHHHHHT
T ss_pred hhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE--CCE---EccCCCCHHHHHHHhc
Confidence 112345679999999654 784 4578889999888775
No 322
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.28 E-value=2.5e-06 Score=62.55 Aligned_cols=93 Identities=11% Similarity=0.181 Sum_probs=70.5
Q ss_pred cccccccc--CCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeC
Q 015527 274 HNAQFVFQ--DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR 349 (405)
Q Consensus 274 ~~~~~~~~--~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~ 349 (405)
+++..... .+.+.++ ++.++|. |....+.+.++++++. ++.|+.+|++... .+++.+|+.. .|.+++++.
T Consensus 8 ~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~~~~~~ 81 (104)
T 2vim_A 8 ADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNE---EAAAKYSVTA--MPTFVFIKD 81 (104)
T ss_dssp HHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH---HHHHHTTCCS--SSEEEEEET
T ss_pred HHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCH---HHHHHcCCcc--ccEEEEEeC
Confidence 55665555 3446555 5666776 9999999999999987 6999999998754 8889999975 788888864
Q ss_pred CCccccCCCCCCHHHHHHHHHHHh
Q 015527 350 DAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 350 ~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
+.....+.| .+.+++.+|+++++
T Consensus 82 g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 82 GKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp TEEEEEEES-SCHHHHHHHHHHHC
T ss_pred CcEEEEEeC-CCHHHHHHHHHhhC
Confidence 333345667 68899999998764
No 323
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.27 E-value=4.5e-06 Score=68.41 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=66.4
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc--c----------------------------------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--L---------------------------------- 115 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~--~---------------------------------- 115 (405)
.+++++|.|..-.|++|+.+.|.+.++.+++.+++.+..+... .
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~~~ 99 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTL 99 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999998876666554320 0
Q ss_pred ---------------------------------------cHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHH
Q 015527 116 ---------------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (405)
Q Consensus 116 ---------------------------------------~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (405)
+...++++||+++||+++ ||+......|..+.+++.+.|
T Consensus 100 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~~~i 177 (184)
T 4dvc_A 100 RKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYFDLV 177 (184)
T ss_dssp CCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHH
T ss_pred hhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHHHHH
Confidence 012356789999999866 886666666778888888888
Q ss_pred Hhhh
Q 015527 157 REKM 160 (405)
Q Consensus 157 ~~~~ 160 (405)
+.++
T Consensus 178 ~~Ll 181 (184)
T 4dvc_A 178 NYLL 181 (184)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7655
No 324
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.27 E-value=3.1e-06 Score=62.91 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=74.6
Q ss_pred cccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEE
Q 015527 269 VTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAY 346 (405)
Q Consensus 269 ~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i 346 (405)
...+.+++......++++++ ++.+||. |....+.+.++++++.+ +.|+.+|.+... .+++.|++.. .|.+++
T Consensus 10 ~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~---~l~~~~~v~~--~Pt~~~ 83 (109)
T 3f3q_A 10 QFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELG---DVAQKNEVSA--MPTLLL 83 (109)
T ss_dssp ECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTTCCS--SSEEEE
T ss_pred CCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCH---HHHHHcCCCc--cCEEEE
Confidence 34455667776766665555 5667877 99999999999999976 999999999754 8899999975 788888
Q ss_pred EeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 347 SARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 347 ~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
++.+.....+.|. +.+.|.+||++++
T Consensus 84 ~~~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 84 FKNGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EECCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 8743333446665 7799999998753
No 325
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.27 E-value=5.7e-06 Score=61.55 Aligned_cols=103 Identities=11% Similarity=0.160 Sum_probs=76.3
Q ss_pred CCccccccccccccccC--CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCC
Q 015527 266 PLVVTLTIHNAQFVFQD--PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAP 341 (405)
Q Consensus 266 p~v~~l~~~~~~~~~~~--~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~ 341 (405)
..+..++.+++...... +.+.++ ++.+||. |....+.+.++++++++ +.|+.+|+++. +..+++.||+.. .
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~--~~~~~~~~~v~~--~ 79 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQE--NKTLAKELGIRV--V 79 (111)
T ss_dssp TSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST--THHHHHHHCCSB--S
T ss_pred CccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcc--hHHHHHHcCCCe--e
Confidence 34677888888877763 445554 5667776 99999999999999986 99999999832 348889999975 6
Q ss_pred cEEEEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 342 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 342 p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
|.++++..+.....+.|. +.++|.+||+++++
T Consensus 80 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 80 PTFKILKENSVVGEVTGA-KYDKLLEAIQAARS 111 (111)
T ss_dssp SEEEEESSSSEEEEEESS-CHHHHHHHHHHHHC
T ss_pred eEEEEEeCCcEEEEEcCC-CHHHHHHHHHHhhC
Confidence 887776543333445664 58999999998763
No 326
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.26 E-value=1.5e-06 Score=66.21 Aligned_cols=101 Identities=18% Similarity=0.273 Sum_probs=71.1
Q ss_pred ccccccccccc-cccCCccEEE-EEecCCC---------------cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhh
Q 015527 268 VVTLTIHNAQF-VFQDPRKQLW-LFAPAYG---------------SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRV 330 (405)
Q Consensus 268 v~~l~~~~~~~-~~~~~~~~~i-~f~~~~~---------------~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~ 330 (405)
+..++.+++.. +...++++++ ++++||. |+...+.+.++++++.+++.|+.+|++... .+
T Consensus 5 v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~---~l 81 (123)
T 1oaz_A 5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP---GT 81 (123)
T ss_dssp CEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCT---TT
T ss_pred cEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCH---HH
Confidence 56678888874 4455555555 5566654 788888999999999988999999999754 88
Q ss_pred hhhcCCCCCCCcEEEEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 331 SQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 331 ~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
++.||+.. .|.++++..+.....+.|..+.+++.+|++..+
T Consensus 82 ~~~~~v~~--~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 82 APKYGIRG--IPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGGTCCB--SSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHcCCCc--cCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999975 688888743333445788889999999998765
No 327
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.26 E-value=2.8e-06 Score=75.20 Aligned_cols=106 Identities=13% Similarity=0.220 Sum_probs=85.5
Q ss_pred CCCccccccccccccccC--CccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCC
Q 015527 265 HPLVVTLTIHNAQFVFQD--PRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNA 340 (405)
Q Consensus 265 ~p~v~~l~~~~~~~~~~~--~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~ 340 (405)
.+.+.++|.++|..+... +++++ .|+.+||. |....+.+.++++++.+++.|+.+|++... .+++.||+..
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~-- 80 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQ---MIAAQFGLRA-- 80 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCH---HHHHTTTCCS--
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCH---HHHHHcCCCC--
Confidence 456888999999987764 44554 46778888 999999999999999999999999999754 8999999975
Q ss_pred CcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 341 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 341 ~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.|.++++..+.....+.|..+.+.+.+|+...+.+
T Consensus 81 ~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 81 IPTVYLFQNGQPVDGFQGPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred CCeEEEEECCEEEEEeeCCCCHHHHHHHHHHHcCC
Confidence 78888886433334477888999999999987754
No 328
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.24 E-value=1.3e-06 Score=62.25 Aligned_cols=56 Identities=11% Similarity=0.325 Sum_probs=44.6
Q ss_pred EEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc--ccHhHHHhC-CCcccceEEEEeCCee
Q 015527 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEY-NILAYPTLYLFVAGVR 139 (405)
Q Consensus 76 ~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~--~~~~~~~~~-~i~~~Pt~~~~~~g~~ 139 (405)
.++.|+++||++|+...+.+++. ++.+..+|++ ...++.+.+ ++.++|+++ .+|+.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK------GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEE
Confidence 46779999999999999988764 3567778887 556788888 999999984 47743
No 329
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.24 E-value=3.4e-06 Score=62.80 Aligned_cols=101 Identities=7% Similarity=0.089 Sum_probs=74.5
Q ss_pred ccccccccccccccCCcc-EEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEE
Q 015527 268 VVTLTIHNAQFVFQDPRK-QLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 345 (405)
Q Consensus 268 v~~l~~~~~~~~~~~~~~-~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~ 345 (405)
...++.+++ .....+.+ ++.++.+||. |+...+.+.+++.++. ++.|+.+|.+... .+++.+|+.. .|.++
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~---~l~~~~~v~~--~Pt~~ 77 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARP---ELMKELGFER--VPTLV 77 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCH---HHHHHTTCCS--SCEEE
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCH---HHHHHcCCcc--cCEEE
Confidence 345667777 33444454 4556677887 9999999999999886 5899999998644 8889999975 78888
Q ss_pred EEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 346 YSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 346 i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
++..+.....+.|..+.++|.++++.+..+
T Consensus 78 ~~~~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 78 FIRDGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp EEESSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred EEECCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 885444445577888999999999987654
No 330
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=98.22 E-value=5.5e-06 Score=66.65 Aligned_cols=80 Identities=10% Similarity=0.106 Sum_probs=58.6
Q ss_pred HHHHHcCCCcEEEEEecCCChhHhh-hHHHHHHHHHHccC-Cc-EEEEEeCcc-----------------------cHhH
Q 015527 66 FSEFMGKNRNVMVMFYANWCYWSKK-LAPEFAAAAKMLKG-EA-DLVMVDAYL-----------------------EKDL 119 (405)
Q Consensus 66 ~~~~~~~~~~~~v~f~a~~C~~C~~-~~~~~~~~~~~~~~-~v-~~~~v~~~~-----------------------~~~~ 119 (405)
+.+.+....++++.||+.||+.|.. ++|.|.+.+++++. ++ .++.|.++. +.++
T Consensus 41 Lsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~v 120 (176)
T 4f82_A 41 VRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGSAAF 120 (176)
T ss_dssp HHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHH
T ss_pred HHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcCchHH
Confidence 4444444445677788999999999 99999999999875 67 777777643 3457
Q ss_pred HHhCCCc-----------ccceEEEEeCCeeeeeecC
Q 015527 120 AKEYNIL-----------AYPTLYLFVAGVRQFQFFG 145 (405)
Q Consensus 120 ~~~~~i~-----------~~Pt~~~~~~g~~~~~~~g 145 (405)
++.||+. +.|+++++++|++...+.+
T Consensus 121 a~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~ 157 (176)
T 4f82_A 121 THALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVE 157 (176)
T ss_dssp HHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEEC
T ss_pred HHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEc
Confidence 7778763 2477777799977766653
No 331
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.21 E-value=4.2e-06 Score=62.99 Aligned_cols=98 Identities=12% Similarity=0.257 Sum_probs=73.2
Q ss_pred cccccc-cccccccc--CCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 268 VVTLTI-HNAQFVFQ--DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 268 v~~l~~-~~~~~~~~--~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
+.+++. +++..... .+.+.++ ++.+||. |....+.+.++++++ ++.|+.+|.+... .+++.||+.. .|
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~---~~~~~~~v~~--~P 87 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLE---ETARKYNISA--MP 87 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSH---HHHHHTTCCS--SS
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccH---HHHHHcCCCc--cc
Confidence 455665 66666665 4445544 5667776 999999999999998 7999999998754 8899999975 78
Q ss_pred EEEEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 343 VIAYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 343 ~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
.++++..+.....+.| .+.+.|.+||++++
T Consensus 88 t~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 88 TFIAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred eEEEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 8888754333444667 68899999998764
No 332
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.21 E-value=5.3e-07 Score=74.73 Aligned_cols=44 Identities=9% Similarity=0.183 Sum_probs=40.7
Q ss_pred CCcEEEEEecCCChhHhhhHHHH---HHHHHHccCCcEEEEEeCccc
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLE 116 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~~~~~ 116 (405)
+++++|.||+.||+||+.+.|.+ +++.+.++++|.|..++.+.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 57899999999999999999999 999999988899999998765
No 333
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.21 E-value=9.7e-06 Score=60.69 Aligned_cols=96 Identities=17% Similarity=0.176 Sum_probs=74.0
Q ss_pred CCccccCChhHHHHHhccCCeEEEEEEcCCCCc---cHHHHHHHhccCCcceEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 015527 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (405)
Q Consensus 162 ~~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~~~~~~~~p~i~ 235 (405)
+.+..+++.+.++..++.++.++|.|+++||.+ ..+.+.++++...++.|+.+ .+.++++++++.. .|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~ 88 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTA---MPTFV 88 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---BSEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCc---ccEEE
Confidence 446778899999999999999999999999987 44556666644444777765 4567999999984 99999
Q ss_pred EeecCCCccccccCCCCHHHHHHHHhc
Q 015527 236 FLHLEAGKATPFRHQFTRLAIANFVTH 262 (405)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~l~~fi~~ 262 (405)
+++.+ .....+.|.. .+.|.+||++
T Consensus 89 ~~~~G-~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDG-QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETT-EEEEEEESSC-HHHHHHHHHT
T ss_pred EEeCC-eEEEEEeCCC-HHHHHHHHHh
Confidence 98654 2345677877 8899999864
No 334
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.21 E-value=2.6e-06 Score=70.23 Aligned_cols=41 Identities=15% Similarity=0.270 Sum_probs=34.7
Q ss_pred CCcEEEEEecCCChhHhhhHHHH---HHHHHHccCCcEEEEEeC
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDA 113 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~~ 113 (405)
.++++|.|++.||++|+.+.|.+ .++.+.+.+++.|..++.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 57 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHV 57 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEEC
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEec
Confidence 36899999999999999999987 688888877777777664
No 335
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.20 E-value=4.7e-06 Score=62.11 Aligned_cols=100 Identities=9% Similarity=0.131 Sum_probs=71.7
Q ss_pred ccccc-ccccccccC---CccEEE-EEecCCC-cHHHHHHHHHHHHHhc-CcEEEEEEEcCCcchhhhhhhhcCCCCCCC
Q 015527 269 VTLTI-HNAQFVFQD---PRKQLW-LFAPAYG-SDKVILTFEEVAKALK-GKLLHVYVEMNSEGVGRRVSQEFGVSGNAP 341 (405)
Q Consensus 269 ~~l~~-~~~~~~~~~---~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~-~~~~f~~id~~~~~~~~~~~~~~gi~~~~~ 341 (405)
.+++. +++...... +.+.++ ++.+||. |....+.+.++++++. .++.|+.+|++... .+++.||+.. .
T Consensus 3 ~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~--~ 77 (112)
T 3d6i_A 3 IEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS---EISELFEISA--V 77 (112)
T ss_dssp EEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH---HHHHHTTCCS--S
T ss_pred cccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH---HHHHHcCCCc--c
Confidence 44555 667666654 445544 5667877 9999999999999963 45999999998754 8889999965 7
Q ss_pred cEEEEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 342 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 342 p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
|.++++..+.....+.|. +.++|.+|+++++.
T Consensus 78 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 78 PYFIIIHKGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp SEEEEEETTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred cEEEEEECCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 888888543333446665 55679999998875
No 336
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.20 E-value=5.5e-06 Score=60.81 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=49.8
Q ss_pred CcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCccc-----HhHH----HhCCCcccceEEEEeCCeeeeeec
Q 015527 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-----KDLA----KEYNILAYPTLYLFVAGVRQFQFF 144 (405)
Q Consensus 74 ~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~-----~~~~----~~~~i~~~Pt~~~~~~g~~~~~~~ 144 (405)
+..++.|+++||++|++..+.+.+.. +.+-.+|++.. +++. +..++.++|++++ .+| ++.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~~~----~~i 89 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-NDE----KAI 89 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-TTT----EEE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-CCC----EEE
Confidence 45577799999999999999988753 33444555431 2232 3468999999865 333 455
Q ss_pred CCCCHHHHHHHH
Q 015527 145 GERTRDVISAWV 156 (405)
Q Consensus 145 g~~~~~~l~~~i 156 (405)
|..+.+.|.++|
T Consensus 90 gg~~~~~l~~~L 101 (103)
T 3nzn_A 90 VGFKEKEIRESL 101 (103)
T ss_dssp ESCCHHHHHHHT
T ss_pred EcCCHHHHHHHh
Confidence 778888888765
No 337
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.20 E-value=3.7e-06 Score=61.12 Aligned_cols=60 Identities=5% Similarity=0.075 Sum_probs=45.5
Q ss_pred CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhC-----CCcccceEEEEeCCeee
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEY-----NILAYPTLYLFVAGVRQ 140 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~-----~i~~~Pt~~~~~~g~~~ 140 (405)
.+.-++.|+++||++|++..+.+++. ++.+..+|++.+++..+.+ +..++|++ |.+|+.+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~i 78 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHI 78 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEE
Confidence 45567779999999999999988865 3667778888876655443 89999987 4577433
No 338
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.19 E-value=3.7e-05 Score=60.26 Aligned_cols=110 Identities=12% Similarity=0.177 Sum_probs=84.7
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecC-CChhHhhhHHHHHHHHHHccCCcEEEEEeC--cccHhHHHhCCCcc--cce
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFYAN-WCYWSKKLAPEFAAAAKMLKGEADLVMVDA--YLEKDLAKEYNILA--YPT 130 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~-~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~--~~~~~~~~~~~i~~--~Pt 130 (405)
.-|.++|.++...+..++-+..++++.. .-..-..+++.+.++|+++++++.|+.||. ++...+.+.||+.. .|+
T Consensus 14 PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~ 93 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPA 93 (147)
T ss_dssp -CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSE
T ss_pred CeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCE
Confidence 3578899999988887776665554442 333355678999999999999999999999 66667889999986 899
Q ss_pred EEEEeC-C-eeeeeec-CCCCHHHHHHHHHhhhcCCcc
Q 015527 131 LYLFVA-G-VRQFQFF-GERTRDVISAWVREKMTLGTY 165 (405)
Q Consensus 131 ~~~~~~-g-~~~~~~~-g~~~~~~l~~~i~~~~~~~~~ 165 (405)
+.+++. + .....+. +..+.+.|.+|+++.+...+.
T Consensus 94 v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~ 131 (147)
T 3bj5_A 94 VRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 131 (147)
T ss_dssp EEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSC
T ss_pred EEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcc
Confidence 999974 2 2334444 789999999999999876553
No 339
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=98.19 E-value=4.9e-06 Score=74.51 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=73.8
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc--------------------
Q 015527 56 KDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-------------------- 114 (405)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~-------------------- 114 (405)
..+.+.+++.+...--.|++++++|| +.||+.|..+++.|.+. .+ .++.++.|+.|
T Consensus 7 F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~--~~-~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~ 83 (322)
T 4eo3_A 7 FELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE--NF-EKAQVVGISRDSVEALKRFKEKNDLKVTLLS 83 (322)
T ss_dssp CEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS--CC-TTEEEEEEESCCHHHHHHHHHHHTCCSEEEE
T ss_pred cEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH--hh-CCCEEEEEeCCCHHHHHHHHHhhCCceEEEE
Confidence 34445555544433346889999999 57999999998888642 22 26778888764
Q ss_pred -ccHhHHHhCCCc----ccceEEEEe-CCeeeeeecCC---CCHHHHHHHHHhhhc
Q 015527 115 -LEKDLAKEYNIL----AYPTLYLFV-AGVRQFQFFGE---RTRDVISAWVREKMT 161 (405)
Q Consensus 115 -~~~~~~~~~~i~----~~Pt~~~~~-~g~~~~~~~g~---~~~~~l~~~i~~~~~ 161 (405)
.+..+++.|||. .+|++++++ +|++...+.+. ...+++.+++++...
T Consensus 84 D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~~ 139 (322)
T 4eo3_A 84 DPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLIE 139 (322)
T ss_dssp CTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHHH
T ss_pred cCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhch
Confidence 345678899984 578999998 99877777653 457899999987763
No 340
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.19 E-value=1.1e-05 Score=56.67 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=64.7
Q ss_pred EEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCCCHHH
Q 015527 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSS 364 (405)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~ 364 (405)
++.++.+||. |....+.++++++++.+++.|..+|.++.. .+++.+|+.. .|.+++ +|+. .+.|..+.++
T Consensus 6 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~--~Pt~~~---~G~~-~~~G~~~~~~ 76 (85)
T 1fo5_A 6 IELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENP---QKAMEYGIMA--VPTIVI---NGDV-EFIGAPTKEA 76 (85)
T ss_dssp EEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSC---CTTTSTTTCC--SSEEEE---TTEE-ECCSSSSSHH
T ss_pred EEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCH---HHHHHCCCcc--cCEEEE---CCEE-eeecCCCHHH
Confidence 4556677877 999999999999999988999999998754 7888999874 788887 3444 6677788999
Q ss_pred HHHHHHHHh
Q 015527 365 IKSFGEEFL 373 (405)
Q Consensus 365 l~~Fi~~~~ 373 (405)
+.+|+++.+
T Consensus 77 l~~~l~~~l 85 (85)
T 1fo5_A 77 LVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998753
No 341
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.19 E-value=6.4e-06 Score=57.52 Aligned_cols=67 Identities=9% Similarity=0.146 Sum_probs=47.6
Q ss_pred EEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccH----hHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHH
Q 015527 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK----DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVI 152 (405)
Q Consensus 77 ~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~----~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l 152 (405)
++.|+++||++|+...+.+.+. ++.+..+|++.++ ++.+.+++.++|+++ .+|+.+. | .+.|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i~---g---~~~i 68 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHIG---G---YDDL 68 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEEE---S---HHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEEe---C---HHHH
Confidence 5679999999999999888764 3556667776653 356678999999984 4775432 2 3566
Q ss_pred HHHHH
Q 015527 153 SAWVR 157 (405)
Q Consensus 153 ~~~i~ 157 (405)
.+++.
T Consensus 69 ~~~~~ 73 (82)
T 1fov_A 69 YALDA 73 (82)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 342
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=98.18 E-value=3.8e-06 Score=69.88 Aligned_cols=88 Identities=22% Similarity=0.280 Sum_probs=69.6
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------------cHhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (405)
.++.+++.|| ++||+.|..+.+.|.+.+++++. ++.++.|.++. +.++++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak 130 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSR 130 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHH
Confidence 5789999999 89999999999999999999976 78888888653 346788
Q ss_pred hCCCc------ccceEEEEe-CCeeeee--ec--CCCCHHHHHHHHHhh
Q 015527 122 EYNIL------AYPTLYLFV-AGVRQFQ--FF--GERTRDVISAWVREK 159 (405)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~--~~--g~~~~~~l~~~i~~~ 159 (405)
.||+- ..+.+++++ +|++... +. -.++.+++.+.|+.+
T Consensus 131 ~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 131 DYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 89873 468899998 8865432 22 357889888877654
No 343
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.18 E-value=8.3e-06 Score=60.21 Aligned_cols=95 Identities=8% Similarity=0.093 Sum_probs=70.4
Q ss_pred ccccccccc--cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEE
Q 015527 272 TIHNAQFVF--QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYS 347 (405)
Q Consensus 272 ~~~~~~~~~--~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~ 347 (405)
+.+++.... ..+.+.++ ++.+||. |+...+.+.++++++ +++.|+.+|++... .+++.||+.. .|.++++
T Consensus 8 ~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~---~~~~~~~v~~--~Pt~~~~ 81 (107)
T 1gh2_A 8 SDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQ---GTAATNNISA--TPTFQFF 81 (107)
T ss_dssp SGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH---HHHHHTTCCS--SSEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCH---HHHHhcCCCc--ccEEEEE
Confidence 456676666 34555544 5667777 999999999999999 46999999999754 8889999975 7888888
Q ss_pred eCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 348 ARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 348 ~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
..+.....+.| .+.++|.+|+++.+
T Consensus 82 ~~G~~~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 82 RNKVRIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp ETTEEEEEEES-SCHHHHHHHHHHHH
T ss_pred ECCeEEEEEeC-CCHHHHHHHHHHhc
Confidence 54333344566 45566999998875
No 344
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.17 E-value=3.8e-06 Score=68.99 Aligned_cols=84 Identities=15% Similarity=0.155 Sum_probs=63.4
Q ss_pred CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCc--------------------c-----------------
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--------------------L----------------- 115 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~--------------------~----------------- 115 (405)
+++++|.|+..||+||+.+.|.+.++.+.+ ++.|..+... .
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~~~~~~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~~~ 99 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMG 99 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECCSSSHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEeccCCccchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999988 3445444321 0
Q ss_pred c-----------------------------------------HhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHH
Q 015527 116 E-----------------------------------------KDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (405)
Q Consensus 116 ~-----------------------------------------~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (405)
. ...++++||.++|++++ +|+......|..+.+.+.+
T Consensus 100 ~~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~~~~~~v~~~~~~a~~~gv~GtPtfvv--ng~~~v~~~Ga~~~e~~~~ 177 (185)
T 3feu_A 100 EGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVPTFVV--NGKYNVLIGGHDDPKQIAD 177 (185)
T ss_dssp TTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCEEEE--CCEEEEecCCCCCHHHHHH
Confidence 0 01124567899999986 7766667789999999988
Q ss_pred HHHhhh
Q 015527 155 WVREKM 160 (405)
Q Consensus 155 ~i~~~~ 160 (405)
-|...+
T Consensus 178 ~i~~ll 183 (185)
T 3feu_A 178 TIRYLL 183 (185)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887665
No 345
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.17 E-value=1.3e-05 Score=66.22 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=35.0
Q ss_pred CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~ 113 (405)
++++++.|+..||++|..+.|.+.++.+.+.++|.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 56789999999999999999999999998877777765543
No 346
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.15 E-value=4.8e-06 Score=65.75 Aligned_cols=98 Identities=8% Similarity=-0.029 Sum_probs=75.5
Q ss_pred cccccccc--cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEe
Q 015527 273 IHNAQFVF--QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSA 348 (405)
Q Consensus 273 ~~~~~~~~--~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~ 348 (405)
.+++.... ..+.++++ ++++||. |....+.+.++++++.+++.|+.+|.+... .+++.|++.. .|.++++.
T Consensus 11 ~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~---~l~~~~~v~~--~Pt~~~~~ 85 (149)
T 3gix_A 11 KKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTA---VYTQYFDISY--IPSTVFFF 85 (149)
T ss_dssp HHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCC---HHHHHTTCCS--SSEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCH---HHHHHcCCCc--cCeEEEEE
Confidence 44555544 33445444 6778887 999999999999999999999999998755 8999999965 68877776
Q ss_pred CCCcc---------ccCCC-CCCHHHHHHHHHHHhcC
Q 015527 349 RDAKK---------YVLNG-ELTLSSIKSFGEEFLED 375 (405)
Q Consensus 349 ~~~~~---------y~~~~-~~~~~~l~~Fi~~~~~G 375 (405)
.+... ..+.| ..+.+++.++++.+..|
T Consensus 86 ~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHH
Confidence 43333 45667 78899999999998755
No 347
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=98.12 E-value=5.8e-06 Score=58.77 Aligned_cols=74 Identities=14% Similarity=0.165 Sum_probs=52.0
Q ss_pred cEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCccc----HhHHHhCCC-----cccceEEEEeCCeeeeeecC
Q 015527 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE----KDLAKEYNI-----LAYPTLYLFVAGVRQFQFFG 145 (405)
Q Consensus 75 ~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~----~~~~~~~~i-----~~~Pt~~~~~~g~~~~~~~g 145 (405)
..++.|+++||++|++..+.+.+.. -.+.+..||.+.+ .++.+.+|. .++|++++ +|+.+ |
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i----~ 73 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI----G 73 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE----E
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE----e
Confidence 3477899999999999988776542 2455666676555 457777888 99999854 77433 2
Q ss_pred CCCHHHHHHHHHhhh
Q 015527 146 ERTRDVISAWVREKM 160 (405)
Q Consensus 146 ~~~~~~l~~~i~~~~ 160 (405)
..+++.+++.+.+
T Consensus 74 --g~~~i~~~~~~~~ 86 (89)
T 3msz_A 74 --GFTELKANADKIL 86 (89)
T ss_dssp --SHHHHHHTHHHHT
T ss_pred --ChHHHHHHHHHHh
Confidence 4567777766654
No 348
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.12 E-value=9.3e-06 Score=56.99 Aligned_cols=79 Identities=13% Similarity=0.111 Sum_probs=64.6
Q ss_pred EEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCCCHHH
Q 015527 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSS 364 (405)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~ 364 (405)
++.++.+||. |....+.++++++++.+++.|+.+|.++.. .+++.+|+.. .|.+++ +|+. .+.|..+.++
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~--~Pt~~~---~G~~-~~~G~~~~~~ 75 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDR---EKAIEYGLMA--VPAIAI---NGVV-RFVGAPSREE 75 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCG---GGGGGTCSSC--SSEEEE---TTTE-EEECSSCCHH
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCH---HHHHhCCcee--eCEEEE---CCEE-EEccCCCHHH
Confidence 4556667877 999999999999999988999999998754 7889999975 788887 3444 5667778899
Q ss_pred HHHHHHHHh
Q 015527 365 IKSFGEEFL 373 (405)
Q Consensus 365 l~~Fi~~~~ 373 (405)
+.+|+++.+
T Consensus 76 l~~~l~~~l 84 (85)
T 1nho_A 76 LFEAINDEM 84 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999999875
No 349
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.11 E-value=5.1e-06 Score=62.14 Aligned_cols=68 Identities=16% Similarity=0.342 Sum_probs=46.0
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcc----cHh----HHHhCCCcccceEEEEe
Q 015527 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL----EKD----LAKEYNILAYPTLYLFV 135 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~----~~~----~~~~~~i~~~Pt~~~~~ 135 (405)
+.+++.+..++ ++.|+++||++|+...+.+.+. ++.+..+|++. .++ +.+..|+.++|++ |.
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi 79 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FV 79 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 34455555555 6669999999999999888764 24445566654 223 4455699999998 45
Q ss_pred CCeeee
Q 015527 136 AGVRQF 141 (405)
Q Consensus 136 ~g~~~~ 141 (405)
+|+.+.
T Consensus 80 ~g~~ig 85 (113)
T 3rhb_A 80 CGKHIG 85 (113)
T ss_dssp TTEEEE
T ss_pred CCEEEc
Confidence 785443
No 350
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.09 E-value=2.9e-05 Score=62.73 Aligned_cols=90 Identities=9% Similarity=0.068 Sum_probs=70.5
Q ss_pred cCCCcEEEEEecCCChhHhhhHHHH---HHHHHHccCCcEEEEEeCcccH---------------hHH---HhCCCcccc
Q 015527 71 GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLEK---------------DLA---KEYNILAYP 129 (405)
Q Consensus 71 ~~~~~~~v~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~~~~~~---------------~~~---~~~~i~~~P 129 (405)
.+.|.++|+++++||..|..+.... +++.+.++.++.+...|.+... .++ +.+++.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 4578999999999999999987543 4455555557889998887654 344 348999999
Q ss_pred eEEEEe-C---CeeeeeecCCCCHHHHHHHHHhhh
Q 015527 130 TLYLFV-A---GVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 130 t~~~~~-~---g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
++.++. . ++.+.+..|..+.+++.+.+.+.+
T Consensus 133 ~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 133 LFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp EEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred eEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 999996 3 256788999999999988887655
No 351
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.09 E-value=1.4e-05 Score=60.79 Aligned_cols=103 Identities=10% Similarity=0.155 Sum_probs=75.8
Q ss_pred CCcccccccccccccc--CCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCC
Q 015527 266 PLVVTLTIHNAQFVFQ--DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAP 341 (405)
Q Consensus 266 p~v~~l~~~~~~~~~~--~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~ 341 (405)
..+..++.+++..... .+++.++ ++.+||. |+...+.++++++++++ +.|+.+|+++. +..+++.||+.. .
T Consensus 18 ~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~--~~~~~~~~~v~~--~ 92 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQE--NKTLAKELGIRV--V 92 (124)
T ss_dssp TSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST--THHHHHHHCCSS--S
T ss_pred CceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcc--hHHHHHHcCCCe--e
Confidence 4467778888877665 3445544 5667776 99999999999999985 89999999732 347889999975 6
Q ss_pred cEEEEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 342 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 342 p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
|.++++..+.....+.|. ..+++.++++.+++
T Consensus 93 Pt~~~~~~G~~~~~~~G~-~~~~l~~~i~~~~~ 124 (124)
T 1faa_A 93 PTFKILKENSVVGEVTGA-KYDKLLEAIQAARS 124 (124)
T ss_dssp SEEEEEETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred eEEEEEeCCcEEEEEcCC-CHHHHHHHHHHhhC
Confidence 888777643333445664 38999999998753
No 352
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.08 E-value=6.6e-06 Score=61.35 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=70.5
Q ss_pred ccccccccccC----CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEE
Q 015527 272 TIHNAQFVFQD----PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 345 (405)
Q Consensus 272 ~~~~~~~~~~~----~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~ 345 (405)
+.+++...+.. +.+.++ ++.+||. |....+.+.++++++. ++.|+.+|.+... .+++.||+.. .|.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~---~~~~~~~v~~--~Pt~~ 84 (113)
T 1ti3_A 11 TVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELK---AVAEEWNVEA--MPTFI 84 (113)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCH---HHHHHHHCSS--TTEEE
T ss_pred cHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccH---HHHHhCCCCc--ccEEE
Confidence 34455544432 445554 5556776 9999999999999987 6999999998754 8889999975 68888
Q ss_pred EEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 346 YSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 346 i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
++..+.....+.| .+.+.+.+||+++++
T Consensus 85 ~~~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 85 FLKDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp EEETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred EEeCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 8854333344566 688999999998875
No 353
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.07 E-value=7.4e-06 Score=58.69 Aligned_cols=57 Identities=14% Similarity=0.319 Sum_probs=42.9
Q ss_pred EEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHh----HHHhCCCcccceEEEEeCCeee
Q 015527 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLFVAGVRQ 140 (405)
Q Consensus 76 ~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~i~~~Pt~~~~~~g~~~ 140 (405)
.++.|+++||++|+...+.+++. ++.|..+|+++++. +.+.+++.++|++ +.+|+.+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i 67 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHV 67 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 46789999999999999888763 36677788876654 4457899999975 4577543
No 354
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.07 E-value=1.3e-05 Score=61.03 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=70.6
Q ss_pred ccccccccccC----CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEE
Q 015527 272 TIHNAQFVFQD----PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 345 (405)
Q Consensus 272 ~~~~~~~~~~~----~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~ 345 (405)
+.+++...+.. +.+.++ ++.+||. |....+.|++++.++. ++.|+.+|.+... .+++.||+.. .|.++
T Consensus 23 ~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~---~l~~~~~v~~--~Pt~~ 96 (124)
T 1xfl_A 23 TVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELK---SVASDWAIQA--MPTFM 96 (124)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSH---HHHHHTTCCS--SSEEE
T ss_pred CHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCH---HHHHHcCCCc--cCEEE
Confidence 44555554443 444444 5667777 9999999999999997 6999999998754 8899999975 68888
Q ss_pred EEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 346 YSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 346 i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
++..+.....+.| .+.+.|.++|++++
T Consensus 97 ~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 97 FLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp EEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred EEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 8754333345666 58899999999875
No 355
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.02 E-value=1.7e-05 Score=61.89 Aligned_cols=97 Identities=10% Similarity=0.057 Sum_probs=72.0
Q ss_pred cccccccc-c-CCccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEe
Q 015527 273 IHNAQFVF-Q-DPRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSA 348 (405)
Q Consensus 273 ~~~~~~~~-~-~~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~ 348 (405)
.+++.... . .+.+++ .++++||. |+...+.+.++++++.+++.|+.+|.+... .+++.||+.. .|.+++++
T Consensus 11 ~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~---~~~~~~~i~~--~Pt~~~~~ 85 (142)
T 1qgv_A 11 GWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVP---DFNKMYELYD--PCTVMFFF 85 (142)
T ss_dssp HHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCC---TTTTSSCSCS--SCEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCH---HHHHHcCCCC--CCEEEEEE
Confidence 44555333 2 344544 46778887 999999999999999888999999999754 8889999975 78888776
Q ss_pred CCCccc----------cCCCCCC-HHHHHHHHHHHhcC
Q 015527 349 RDAKKY----------VLNGELT-LSSIKSFGEEFLED 375 (405)
Q Consensus 349 ~~~~~y----------~~~~~~~-~~~l~~Fi~~~~~G 375 (405)
. |... .+.+.++ .+++.++|+.+++|
T Consensus 86 ~-G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 86 R-NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp T-TEEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred C-CcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 4 3322 3445554 89999999998876
No 356
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.02 E-value=1.6e-05 Score=59.71 Aligned_cols=96 Identities=8% Similarity=0.131 Sum_probs=69.0
Q ss_pred CccccCChhHHHH-HhccCC--eEEEEEEcCCCCc---cHHHHHHHhccCCcceEEEecCHHHHhhcCCCCCCCCCeEEE
Q 015527 163 GTYSITTTDEAER-ILTVES--KLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (405)
Q Consensus 163 ~~~~i~~~~~~~~-~l~~~~--~~~v~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~i~~ 236 (405)
.+..++ .+++.. +.+... .++|.|+++||++ ..+.+..+|+...++.|+.+.-.+.+++|++.. .|++++
T Consensus 4 ~v~~it-~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~~~~~~v~~---~PT~~~ 79 (118)
T 3evi_A 4 ELREIS-GNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSCIQHYHDNC---LPTIFV 79 (118)
T ss_dssp SCEECC-GGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGTSTTCCGGG---CSEEEE
T ss_pred ceEEeC-HHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHhHHHCCCCC---CCEEEE
Confidence 355664 455554 444443 8999999999988 555677788656789999887777778999985 999999
Q ss_pred eecCCCccccccC-------CCCHHHHHHHHhcc
Q 015527 237 LHLEAGKATPFRH-------QFTRLAIANFVTHT 263 (405)
Q Consensus 237 ~~~~~~~~~~y~g-------~~~~~~l~~fi~~~ 263 (405)
|+++. ....+.| .++.++|..||.++
T Consensus 80 fk~G~-~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 80 YKNGQ-IEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EETTE-EEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EECCE-EEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 99763 2223322 36789999999764
No 357
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.00 E-value=1.6e-05 Score=59.73 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=71.8
Q ss_pred ccccccccccC----CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEE
Q 015527 272 TIHNAQFVFQD----PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 345 (405)
Q Consensus 272 ~~~~~~~~~~~----~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~ 345 (405)
+.+++...+.. +.+.++ ++.+||. |....+.++++++++. ++.|+.+|.+... .+++.||+.. .|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~~ 86 (118)
T 2vm1_A 13 TKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELK---DVAEAYNVEA--MPTFL 86 (118)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---HHHHHTTCCS--BSEEE
T ss_pred CHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCH---HHHHHcCCCc--CcEEE
Confidence 34556555543 445555 5666776 9999999999999997 6999999998754 8889999975 78888
Q ss_pred EEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 346 YSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 346 i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
++..+.....+.| .+.+.+.++|+++++.
T Consensus 87 ~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 87 FIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred EEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 8754333344566 5889999999998764
No 358
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.24 E-value=8.7e-07 Score=65.27 Aligned_cols=100 Identities=19% Similarity=0.241 Sum_probs=74.5
Q ss_pred ccccccccccccc-cCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEE
Q 015527 268 VVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVI 344 (405)
Q Consensus 268 v~~l~~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i 344 (405)
+..++.+++.... ..+.+.++ ++.++|. |....+.++++++++.+++.|+.+|++... .+++.+|+.. .|.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~v~~--~Pt~ 77 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENP---NTAAQYGIRS--IPTL 77 (106)
Confidence 3456677766433 44445544 4556666 899999999999999988999999998754 7889999875 6888
Q ss_pred EEEeCCCccccCCCCCCHHHHHHHHHHH
Q 015527 345 AYSARDAKKYVLNGELTLSSIKSFGEEF 372 (405)
Q Consensus 345 ~i~~~~~~~y~~~~~~~~~~l~~Fi~~~ 372 (405)
+++..+.....+.|..+.+++.+|+++.
T Consensus 78 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 78 LLFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 8874344445677888889999998865
No 359
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.96 E-value=7.6e-06 Score=63.38 Aligned_cols=102 Identities=14% Similarity=0.117 Sum_probs=75.0
Q ss_pred ccccccccccccccCCccEEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCC-------cchhhhhhhhcCCCCC
Q 015527 268 VVTLTIHNAQFVFQDPRKQLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNS-------EGVGRRVSQEFGVSGN 339 (405)
Q Consensus 268 v~~l~~~~~~~~~~~~~~~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~-------~~~~~~~~~~~gi~~~ 339 (405)
+..++.+++...... ..++.++++||. |....+.+.+++++++ +.|+.+|+++ .. +..+++.||+..
T Consensus 18 v~~l~~~~~~~~~~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~-~~~l~~~~~v~~- 92 (135)
T 3emx_A 18 LIYITPEEFRQLLQG-DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSA-ARLEMNKAGVEG- 92 (135)
T ss_dssp EEECCHHHHHHHHTS-SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHH-HHHHHHHHTCCS-
T ss_pred eeecCHHHHHHHhCC-cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhh-hHHHHHHcCCce-
Confidence 344555555555554 234446778887 9999999999999987 8899999822 12 458889999975
Q ss_pred CCcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 340 APRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 340 ~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.|.+++++.+.....+.|..+.+.+.++++..+++
T Consensus 93 -~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 93 -TPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp -SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred -eCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 78988888443445678889999999999999876
No 360
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.95 E-value=2.1e-05 Score=57.61 Aligned_cols=95 Identities=7% Similarity=0.033 Sum_probs=69.1
Q ss_pred CccccCChhHHHHHhccCCeEEEEEEcCCCCccHH---HHHHHhccCCcceEEEe---cCH----HHHhhcCCCCCCCCC
Q 015527 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSA----DVAEFFHIHPKSKRP 232 (405)
Q Consensus 163 ~~~~i~~~~~~~~~l~~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~----~l~~~~~~~~~~~~p 232 (405)
....+++.++++++++.+.+++|.|++.||+++.. .|.+.+.. .++.|+.+ ... .++++++++. ..|
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V~h--~sP 83 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNVKH--ESP 83 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTCCC--CSS
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCCcc--CCC
Confidence 34578899999999999999999999999998555 45555542 66777765 332 3799999983 279
Q ss_pred eEEEeecCCCccccccCCCCHHHHHHHH
Q 015527 233 ALIFLHLEAGKATPFRHQFTRLAIANFV 260 (405)
Q Consensus 233 ~i~~~~~~~~~~~~y~g~~~~~~l~~fi 260 (405)
++++|+++......-.+..+...|.+.+
T Consensus 84 q~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 84 QAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred eEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 9999998753333345667777776654
No 361
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.95 E-value=1.5e-05 Score=59.69 Aligned_cols=67 Identities=15% Similarity=0.358 Sum_probs=46.2
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcc--c-----HhHHHhCCCcccceEEEEeC
Q 015527 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--E-----KDLAKEYNILAYPTLYLFVA 136 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~--~-----~~~~~~~~i~~~Pt~~~~~~ 136 (405)
+.+++.+.+++ ++.|+++||++|++..+.+.+. ++.+-.+|++. + ..+.+..|..++|++++ +
T Consensus 8 ~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~ 77 (114)
T 3h8q_A 8 RHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSL------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--N 77 (114)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHc------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--C
Confidence 45666665554 3349999999999999888764 34456666653 2 23556778999999865 7
Q ss_pred Ceee
Q 015527 137 GVRQ 140 (405)
Q Consensus 137 g~~~ 140 (405)
|+.+
T Consensus 78 g~~i 81 (114)
T 3h8q_A 78 KVHV 81 (114)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 7433
No 362
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.94 E-value=1.9e-05 Score=65.02 Aligned_cols=40 Identities=10% Similarity=0.228 Sum_probs=33.5
Q ss_pred CCcEEEEEecCCChhHhhhHHHH---HHHHHHccCCcEEEEEe
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVD 112 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~v~ 112 (405)
+++++|.|+..||++|+.+.|.+ .++.+.+.+++.|..+.
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~ 63 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYH 63 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEE
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEe
Confidence 47899999999999999999986 68999998756665554
No 363
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.92 E-value=1.9e-06 Score=67.00 Aligned_cols=100 Identities=9% Similarity=0.011 Sum_probs=71.0
Q ss_pred CccccccccccccccCCc--cEEE-EEecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcchhhhhhhhcCCCC---
Q 015527 267 LVVTLTIHNAQFVFQDPR--KQLW-LFAPAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEGVGRRVSQEFGVSG--- 338 (405)
Q Consensus 267 ~v~~l~~~~~~~~~~~~~--~~~i-~f~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~~~~~~~~~~gi~~--- 338 (405)
.+..++.+++........ ++++ ++++||. |+...+.|.++++++.+ ++.|+.+|++... .+++.|++..
T Consensus 8 ~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~---~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 8 YIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT---DVSTRYKVSTSPL 84 (137)
T ss_dssp CCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH---HHHHHTTCCCCSS
T ss_pred eEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH---HHHHHccCcccCC
Confidence 467788888887665544 4444 5667777 99999999999999986 7999999998754 8889999961
Q ss_pred -CCCcEEEEEeCCCccccCCCCCCHHHHHHHH
Q 015527 339 -NAPRVIAYSARDAKKYVLNGELTLSSIKSFG 369 (405)
Q Consensus 339 -~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi 369 (405)
...|.++++..+.....+.|..+.+.|.+|+
T Consensus 85 ~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l 116 (137)
T 2dj0_A 85 TKQLPTLILFQGGKEAMRRPQIDKKGRAVSWT 116 (137)
T ss_dssp SSCSSEEEEESSSSEEEEESCBCSSSCBCCCC
T ss_pred cCCCCEEEEEECCEEEEEecCcCchHHHHHHH
Confidence 1378888885433333455555545444444
No 364
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.91 E-value=2.5e-05 Score=60.71 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=72.8
Q ss_pred cccccccccc----CCccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEE
Q 015527 272 TIHNAQFVFQ----DPRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 345 (405)
Q Consensus 272 ~~~~~~~~~~----~~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~ 345 (405)
+.+++..... .+.+++ .++.+||. |....+.+.++++++. ++.|+.+|++... .+++.||+.. .|.++
T Consensus 31 ~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~---~~~~~~~v~~--~Pt~~ 104 (139)
T 3d22_A 31 TKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELS---DFSASWEIKA--TPTFF 104 (139)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---HHHHHTTCCE--ESEEE
T ss_pred CHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccH---HHHHHcCCCc--ccEEE
Confidence 3556655442 244444 46667777 9999999999999985 5999999999754 8899999975 78888
Q ss_pred EEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 346 YSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 346 i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
++..+.....+.|. +.++|.+||+.++.+
T Consensus 105 ~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 105 FLRDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp EEETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred EEcCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 87543334456676 889999999999876
No 365
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.90 E-value=0.0001 Score=56.80 Aligned_cols=99 Identities=14% Similarity=0.161 Sum_probs=72.6
Q ss_pred CCccccCChhHHHHHhcc--CCeEEEEEEcCCCCccHHHH------HHHhccCCcceEEEec-------CHHHHhhcCCC
Q 015527 162 LGTYSITTTDEAERILTV--ESKLVLGFLHDLEGMESEEL------AAASKLHSDVNFYQTT-------SADVAEFFHIH 226 (405)
Q Consensus 162 ~~~~~i~~~~~~~~~l~~--~~~~~v~f~~~~~~~~~~~~------~~~a~~~~~~~f~~~~-------~~~l~~~~~~~ 226 (405)
+.+..+.+.+.+...+.. +++++|.|+++||.++.... ..+++...++.+..+. +..++++|++.
T Consensus 11 ~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v~ 90 (134)
T 2fwh_A 11 LNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVL 90 (134)
T ss_dssp CCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTCC
T ss_pred CCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCCC
Confidence 455667788888777754 67899999999999876543 3445434457776653 34688999998
Q ss_pred CCCCCCeEEEeecCCCcc--ccccCCCCHHHHHHHHhcc
Q 015527 227 PKSKRPALIFLHLEAGKA--TPFRHQFTRLAIANFVTHT 263 (405)
Q Consensus 227 ~~~~~p~i~~~~~~~~~~--~~y~g~~~~~~l~~fi~~~ 263 (405)
. .|+++++...+... ..+.|..+.++|.+++...
T Consensus 91 ~---~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 91 G---LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp S---SSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred C---CCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 4 99999995443333 5788999999999999753
No 366
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.89 E-value=2.2e-05 Score=59.03 Aligned_cols=102 Identities=13% Similarity=0.113 Sum_probs=72.4
Q ss_pred CccccccccccccccCCccE-EEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCc-chhhhhhhhcCCCCCCCcE
Q 015527 267 LVVTLTIHNAQFVFQDPRKQ-LWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSE-GVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 267 ~v~~l~~~~~~~~~~~~~~~-~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~-~~~~~~~~~~gi~~~~~p~ 343 (405)
.+..++.+++......+.+. +.++.+||. |....+.+.++++++..++.++-++.... .-...+++.+|+.. .|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~--~Pt 90 (118)
T 1zma_A 13 DLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPT--VPG 90 (118)
T ss_dssp TSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCS--SCE
T ss_pred hhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCC--CCe
Confidence 35566777777766666655 446667887 99999999999999987766654433221 11346778999975 688
Q ss_pred EEEEeCCCccccCCCCCCHHHHHHHHH
Q 015527 344 IAYSARDAKKYVLNGELTLSSIKSFGE 370 (405)
Q Consensus 344 i~i~~~~~~~y~~~~~~~~~~l~~Fi~ 370 (405)
+++++.+.....+.|..+.+.|.+|++
T Consensus 91 ~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 91 FVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred EEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 888864444455788899999999985
No 367
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.85 E-value=3.7e-05 Score=58.88 Aligned_cols=103 Identities=12% Similarity=0.174 Sum_probs=75.7
Q ss_pred ccccccccccc----CCccEEE-EEecCCC-cHHHHHHH---HHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCC
Q 015527 271 LTIHNAQFVFQ----DPRKQLW-LFAPAYG-SDKVILTF---EEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAP 341 (405)
Q Consensus 271 l~~~~~~~~~~----~~~~~~i-~f~~~~~-~~~~~~~~---~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~ 341 (405)
++..++..... .++++++ ++.+||. |......+ ..+++.+..++.++.+|++... ...+++.||+.. .
T Consensus 11 ~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~v~~--~ 87 (130)
T 2kuc_A 11 FRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGE-GVELRKKYGVHA--Y 87 (130)
T ss_dssp CBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTT-HHHHHHHTTCCS--S
T ss_pred cccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcc-hHHHHHHcCCCC--C
Confidence 45555555442 3445544 5566777 88888888 7777777778899999988533 458899999975 7
Q ss_pred cEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcCc
Q 015527 342 RVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 342 p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
|.+++++.+|+ .+.+.|..+.+.+.+||++.+.+.
T Consensus 88 Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 88 PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 89999876444 455778889999999999998763
No 368
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.84 E-value=0.00013 Score=60.69 Aligned_cols=88 Identities=16% Similarity=0.304 Sum_probs=68.4
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcEEEEEeCcc----------------------------cHhHHH
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (405)
.++.+++.|| ++||+.|..+...|.+.+.+++. ++.++.|.+|. +.++++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~ 134 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIAR 134 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHHH
Confidence 5788999999 89999999999999999999987 78888888753 346788
Q ss_pred hCCCc------ccceEEEEe-CCeeeeee--c--CCCCHHHHHHHHHhh
Q 015527 122 EYNIL------AYPTLYLFV-AGVRQFQF--F--GERTRDVISAWVREK 159 (405)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~--~--g~~~~~~l~~~i~~~ 159 (405)
.||+- .+-.+++++ +|++...+ . -.++.+++.+.|+.+
T Consensus 135 ~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 135 SYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 89874 234678887 88655433 2 356888888877654
No 369
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.81 E-value=3.9e-05 Score=57.72 Aligned_cols=95 Identities=20% Similarity=0.242 Sum_probs=68.3
Q ss_pred cccccc-ccccCCccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEe
Q 015527 272 TIHNAQ-FVFQDPRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSA 348 (405)
Q Consensus 272 ~~~~~~-~~~~~~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~ 348 (405)
+..++. .+...+.+.+ .++.+||. |....+.+.+++.++ +++.|+.+|++... .+++.|++.. .|.+++++
T Consensus 11 ~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~---~~~~~~~i~~--~Pt~~~~~ 84 (118)
T 2f51_A 11 THEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNG---NAADAYGVSS--IPALFFVK 84 (118)
T ss_dssp CHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCH---HHHHHTTCCS--SSEEEEEE
T ss_pred CHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCH---HHHHhcCCCC--CCEEEEEe
Confidence 345555 3334455544 45667777 999999999999999 77999999999754 8899999975 78888876
Q ss_pred C----CCccccCCCCCCHHHHHHHHHHHh
Q 015527 349 R----DAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 349 ~----~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
. +.....+.|. ..++|.+.++.+.
T Consensus 85 ~~~~~G~~~~~~~G~-~~~~l~~~~~~~~ 112 (118)
T 2f51_A 85 KEGNEIKTLDQFVGA-DVSRIKADIEKFK 112 (118)
T ss_dssp EETTEEEEEEEEESC-CHHHHHHHHHHHC
T ss_pred CCCCcceEEEeecCC-CHHHHHHHHHHhh
Confidence 5 2223345563 4566988888764
No 370
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.79 E-value=5.8e-05 Score=55.87 Aligned_cols=67 Identities=21% Similarity=0.343 Sum_probs=48.1
Q ss_pred hhHHHHHcCCCcEEEEEec-----CCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhH----HHhCCCcccceEEEE
Q 015527 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDL----AKEYNILAYPTLYLF 134 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a-----~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~----~~~~~i~~~Pt~~~~ 134 (405)
+.+++.+..++ ++ .|+. +||++|++..+.+.+. ++.+..+|++.++.+ .+..|..++|++ |
T Consensus 6 ~~~~~~i~~~~-vv-vy~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i--f 75 (109)
T 1wik_A 6 SGLKVLTNKAS-VM-LFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL--Y 75 (109)
T ss_dssp CCHHHHHTTSS-EE-EEESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE--E
T ss_pred HHHHHHhccCC-EE-EEEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE--E
Confidence 44667776655 44 4666 9999999999888653 477889999887653 445688899985 5
Q ss_pred eCCeee
Q 015527 135 VAGVRQ 140 (405)
Q Consensus 135 ~~g~~~ 140 (405)
.+|+.+
T Consensus 76 i~g~~i 81 (109)
T 1wik_A 76 VRGDLV 81 (109)
T ss_dssp CSSSEE
T ss_pred ECCEEE
Confidence 577433
No 371
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.77 E-value=7.9e-05 Score=57.26 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=67.5
Q ss_pred CccEEE-EEecCCC-cHHHHHHHH--HHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCC-CCCcEEEEEeCCCc-cccC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFE--EVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSG-NAPRVIAYSARDAK-KYVL 356 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~--~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~-~~~p~i~i~~~~~~-~y~~ 356 (405)
++++++ ++.+||. |....+.|. +++..+.+++.++.+|.++..-+..+++.||+.. ...|.+++++.+|+ .+..
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~ 108 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTT 108 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEEC
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEe
Confidence 444444 6667887 999999999 9999998889999999932111458999999921 23799999976444 3445
Q ss_pred CC-------CCCHHHHHHHHHHHh
Q 015527 357 NG-------ELTLSSIKSFGEEFL 373 (405)
Q Consensus 357 ~~-------~~~~~~l~~Fi~~~~ 373 (405)
.| ..+.+++.+|++.+.
T Consensus 109 ~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 109 KGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp CSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred cCCcccccccCCHHHHHHHHHHhc
Confidence 55 578999999998875
No 372
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.77 E-value=0.0011 Score=63.59 Aligned_cols=171 Identities=12% Similarity=0.012 Sum_probs=117.0
Q ss_pred CCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCe-eeeeecCCCCHHH
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGV-RQFQFFGERTRDV 151 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~-~~~~~~g~~~~~~ 151 (405)
.+++.+.++.+.|..|.++...++++++. .+++.+...+ .. . ...|++.+.++|+ .-.+|.|-..-.+
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~--~~-~-------~~~p~~~~~~~~~~~~i~f~g~p~g~e 86 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN--TL-P-------VRKPSFLITNPGSQQGPRFAGSPLGHE 86 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT--TS-S-------SCSSEEEEECTTCCCSCEEESCCCGGG
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC--Cc-c-------cCCCEEEEecCCCcceEEEeccCcchh
Confidence 35666667777899999999999998765 4466653322 11 0 4579999998773 4578998877777
Q ss_pred HHHHHHhhhc--CCccccCChhHHHHHhcc-CCeEEEEEEcCCCCccHHH---HHHHhccCCcceEEEe---cCHHHHhh
Q 015527 152 ISAWVREKMT--LGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQT---TSADVAEF 222 (405)
Q Consensus 152 l~~~i~~~~~--~~~~~i~~~~~~~~~l~~-~~~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~~~---~~~~l~~~ 222 (405)
+..++...+. .....+ +.+.++.+.+. ....++.|+.+||.++... +..++....++.+..+ ...+++++
T Consensus 87 ~~s~~~~l~~~~~~~~~~-~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~ 165 (521)
T 1hyu_A 87 FTSLVLALLWTGGHPSKE-AQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITE 165 (521)
T ss_dssp HHHHHHHHHHHTTCCCCS-CHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhhHHHHHH
Confidence 7777766542 222333 45555555433 4566778889999996554 5555644457887765 56788999
Q ss_pred cCCCCCCCCCeEEEeecCCCccccccCCCCHHHHHHHHhcc
Q 015527 223 FHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (405)
Q Consensus 223 ~~~~~~~~~p~i~~~~~~~~~~~~y~g~~~~~~l~~fi~~~ 263 (405)
+++.. .|++++ ++ +. ...|..+.++|.+|+...
T Consensus 166 ~~i~s---vPt~~i--~g--~~-~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 166 RNVMG---VPAVFV--NG--KE-FGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp TTCCS---SSEEEE--TT--EE-EEESCCCHHHHHHHHCCS
T ss_pred hCCCc---cCEEEE--CC--EE-EecCCCCHHHHHHHHhhc
Confidence 99984 899976 22 22 344888889999998764
No 373
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.76 E-value=2.2e-05 Score=60.10 Aligned_cols=71 Identities=10% Similarity=0.235 Sum_probs=48.2
Q ss_pred hhhHHHHHcCCCcEEEEEecCCChhHhhh-HHHHHHHHHHccCCcEEEEEeCccc-------HhHHHhCCCcccceEEEE
Q 015527 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKGEADLVMVDAYLE-------KDLAKEYNILAYPTLYLF 134 (405)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~a~~C~~C~~~-~~~~~~~~~~~~~~v~~~~v~~~~~-------~~~~~~~~i~~~Pt~~~~ 134 (405)
.+.+++.+..++ ++.|+++||++|++. .+.+.+.... .+.+..+|++.+ ..+.+.+|..++|++ |
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~---~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--f 99 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVP---KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--Y 99 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCC---GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--E
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCcc---CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--E
Confidence 345566665544 667999999999999 8777654311 145555665543 357778899999996 5
Q ss_pred eCCeee
Q 015527 135 VAGVRQ 140 (405)
Q Consensus 135 ~~g~~~ 140 (405)
.+|+.+
T Consensus 100 i~g~~i 105 (129)
T 3ctg_A 100 INGKHI 105 (129)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 577543
No 374
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.70 E-value=4.5e-05 Score=57.83 Aligned_cols=98 Identities=8% Similarity=0.036 Sum_probs=69.4
Q ss_pred ccccccccccccccC--CccEEE-EEec-------CCC-cHHHHHHHHHHHHHhcCcEEEEEEEc-------CCcchhhh
Q 015527 268 VVTLTIHNAQFVFQD--PRKQLW-LFAP-------AYG-SDKVILTFEEVAKALKGKLLHVYVEM-------NSEGVGRR 329 (405)
Q Consensus 268 v~~l~~~~~~~~~~~--~~~~~i-~f~~-------~~~-~~~~~~~~~~va~~~~~~~~f~~id~-------~~~~~~~~ 329 (405)
+...+.+++...... +.++++ ++.+ ||. |....+.+.++++++.+++.|+.+|. +. +..
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~---~~~ 83 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDP---NND 83 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCT---TCH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhch---hHH
Confidence 334455566555544 445554 5666 776 99999999999999988899999999 44 347
Q ss_pred hhhhcCCCCCCCcEEEEEeCCCccccCCCCCCHHHHHHHHHH
Q 015527 330 VSQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEE 371 (405)
Q Consensus 330 ~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~ 371 (405)
+++.|++.. .|.+++++..++...+.+ .+.+.|.+|+++
T Consensus 84 ~~~~~~i~~--~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 84 FRKNLKVTA--VPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHCCCS--SSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHCCCCe--eCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 888899975 789988875222222222 567889999874
No 375
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.64 E-value=0.00016 Score=55.85 Aligned_cols=97 Identities=10% Similarity=0.095 Sum_probs=70.0
Q ss_pred CccccCChhHHHHHhccC---CeEEEEEEcCCCCcc---HHHHHHHhccCCcceEEEecCHHHHhhcCCCCCCCCCeEEE
Q 015527 163 GTYSITTTDEAERILTVE---SKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (405)
Q Consensus 163 ~~~~i~~~~~~~~~l~~~---~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~i~~ 236 (405)
.+..+ +.+++...+... ..++|.|+++||.++ .+.+..++....++.|+.+......++|++. +.|++++
T Consensus 11 ~v~~i-~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~~~~~i~---~~Pt~~~ 86 (135)
T 2dbc_A 11 ELREI-SGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDN---CLPTIFV 86 (135)
T ss_dssp SCEEC-CHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSCSSCCSS---CCSEEEE
T ss_pred ceEEc-CHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCcccCCCC---CCCEEEE
Confidence 45667 778888776542 578999999999884 4456666654567888887655555789998 4999999
Q ss_pred eecCCCccccccCC-------CCHHHHHHHHhccC
Q 015527 237 LHLEAGKATPFRHQ-------FTRLAIANFVTHTK 264 (405)
Q Consensus 237 ~~~~~~~~~~y~g~-------~~~~~l~~fi~~~~ 264 (405)
|+++. ....+.|. ++.++|..|+..+.
T Consensus 87 ~~~G~-~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 87 YKNGQ-IEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp ESSSS-CSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EECCE-EEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 98553 34444454 36789999998763
No 376
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.63 E-value=1.9e-05 Score=60.46 Aligned_cols=101 Identities=12% Similarity=0.128 Sum_probs=72.3
Q ss_pred cccc-ccccccccccC----CccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCC
Q 015527 268 VVTL-TIHNAQFVFQD----PRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNA 340 (405)
Q Consensus 268 v~~l-~~~~~~~~~~~----~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~ 340 (405)
+.++ +.+++...+.. +.+.+ .++.+||. |....+.+.+++.+++ ++.|+.+|.+... .+++.||+..
T Consensus 16 ~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~---~~~~~~~v~~-- 89 (130)
T 1wmj_A 16 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELK---EVAEKYNVEA-- 89 (130)
T ss_dssp SBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSG---GGHHHHTCCS--
T ss_pred eEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchH---HHHHHcCCCc--
Confidence 3344 34555554443 44444 45566776 8899999999999987 5999999998754 8889999975
Q ss_pred CcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 341 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 341 ~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.|.++++..+.....+.| .+.+.+.+||+++++.
T Consensus 90 ~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 90 MPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp SCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred cceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 678777753333344666 5889999999998865
No 377
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.63 E-value=6.3e-05 Score=57.93 Aligned_cols=100 Identities=9% Similarity=0.114 Sum_probs=71.0
Q ss_pred ccccc-cccccccccCC--ccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCc
Q 015527 268 VVTLT-IHNAQFVFQDP--RKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 342 (405)
Q Consensus 268 v~~l~-~~~~~~~~~~~--~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p 342 (405)
+.+++ .+++..++... ++++ .++.+||. |....+.++++++++ ++.|+.+|.+... .+++.||+.. .|
T Consensus 22 v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~---~l~~~~~v~~--~P 94 (133)
T 3cxg_A 22 YIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHP---KLNDQHNIKA--LP 94 (133)
T ss_dssp EEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCH---HHHHHTTCCS--SS
T ss_pred EEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchH---HHHHhcCCCC--CC
Confidence 34444 35566555543 3444 46667887 999999999998887 5899999998754 8889999965 78
Q ss_pred EEEEEe-CCCc---cccCCCCCCHHHHHHHHHHHhcC
Q 015527 343 VIAYSA-RDAK---KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 343 ~i~i~~-~~~~---~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.++++. .+|. ...+.|. +.++|.++|+.++..
T Consensus 95 t~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 95 TFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp EEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred EEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 888873 2232 3445665 889999999988653
No 378
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.58 E-value=0.00063 Score=52.06 Aligned_cols=88 Identities=9% Similarity=0.143 Sum_probs=65.3
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCc-------------------chhhhhhhhcCCCCCCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSE-------------------GVGRRVSQEFGVSGNAP 341 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~-------------------~~~~~~~~~~gi~~~~~ 341 (405)
+++.++ ++..+|. |......+.++++++. ++.|+.++.++. .-...+.+.||+.. .
T Consensus 24 ~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~--~ 100 (136)
T 1lu4_A 24 GKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW--Q 100 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS--S
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC--C
Confidence 345554 5556676 8999999999999998 799999988761 00236778888864 7
Q ss_pred cEEEEEeCCCccccCC---CCCCHHHHHHHHHHHh
Q 015527 342 RVIAYSARDAKKYVLN---GELTLSSIKSFGEEFL 373 (405)
Q Consensus 342 p~i~i~~~~~~~y~~~---~~~~~~~l~~Fi~~~~ 373 (405)
|.+++++.+|+...+. |..+.++|.+++++++
T Consensus 101 P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 101 PAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC-
T ss_pred CEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHHh
Confidence 8998987755443556 8889999999999875
No 379
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=97.57 E-value=0.00016 Score=60.67 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=70.5
Q ss_pred CccccCChhHHHHHhccC---CeEEEEEEcCCCCcc---HHHHHHHhccCCcceEEEec--CHHHHhhcCCCCCCCCCeE
Q 015527 163 GTYSITTTDEAERILTVE---SKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTT--SADVAEFFHIHPKSKRPAL 234 (405)
Q Consensus 163 ~~~~i~~~~~~~~~l~~~---~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~--~~~l~~~~~~~~~~~~p~i 234 (405)
.+..+.+.+++...+... ..++|.|+++||.++ .+.+..++.....+.|+.+. +..++..|++.. .|++
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~~~~l~~~~~i~~---~PTl 176 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRASNTGAGDRFSSDV---LPTL 176 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEEEHHHHTCSTTSCGGG---CSEE
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEEECCcHHHHHHCCCCC---CCEE
Confidence 356676778888877543 789999999999984 44566777555688888764 345777899984 9999
Q ss_pred EEeecCCCccccccCCC-------CHHHHHHHHhccC
Q 015527 235 IFLHLEAGKATPFRHQF-------TRLAIANFVTHTK 264 (405)
Q Consensus 235 ~~~~~~~~~~~~y~g~~-------~~~~l~~fi~~~~ 264 (405)
++|+.+. ....+.|.. +.+.|..||..+.
T Consensus 177 ~~~~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 177 LVYKGGE-LISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEECCE-EEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 9998543 333455543 3489999998653
No 380
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.57 E-value=0.00063 Score=52.00 Aligned_cols=89 Identities=15% Similarity=0.160 Sum_probs=66.0
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCc--------------------chhhhhhhhcCCCCCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSE--------------------GVGRRVSQEFGVSGNA 340 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~--------------------~~~~~~~~~~gi~~~~ 340 (405)
+++.++ ++..+|. |......+.++++++. ++.|+.++.++. .-...+.+.||+..
T Consensus 25 ~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~-- 101 (136)
T 1zzo_A 25 GKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ-- 101 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS--
T ss_pred CCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC--
Confidence 344444 5556776 8999999999999998 799999987541 01346778888864
Q ss_pred CcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 341 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 341 ~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
.|.+++++.+|....+.|..+.+++.++|+.+++
T Consensus 102 ~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 102 QPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp SSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred CceEEEECCCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 7899998875544366778899999999998764
No 381
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=97.53 E-value=0.00052 Score=53.43 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=68.4
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCc------------------------chhhhhhhhcCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSE------------------------GVGRRVSQEFGV 336 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~------------------------~~~~~~~~~~gi 336 (405)
+++.++ ++..+|. |....+.+.++++++.+++.|+.++.+.. .-...+.+.||+
T Consensus 29 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 108 (148)
T 2b5x_A 29 EKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFEN 108 (148)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCC
T ss_pred CCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCC
Confidence 344444 5566676 89999999999999998899999985420 113467888998
Q ss_pred CCCCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 337 SGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 337 ~~~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.. .|.+++++.+|+ .+.+.|..+.+++.++|+.++++
T Consensus 109 ~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 109 EY--VPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp CC--SSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred CC--CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 64 789989877444 45567778899999999998875
No 382
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.52 E-value=0.00067 Score=56.26 Aligned_cols=88 Identities=19% Similarity=0.250 Sum_probs=64.5
Q ss_pred CCCcEEEEEecCCChhHhhhHHHH-HHHHHHcc--CCcEEEEEeCcc---------------------------------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKMLK--GEADLVMVDAYL--------------------------------- 115 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~-~~~~~~~~--~~v~~~~v~~~~--------------------------------- 115 (405)
..+++++.|....|++|+++.+.+ ..+.+.|. ++|.|...+.--
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~~ 107 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEK 107 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHHh
Confidence 457899999999999999999886 56667773 367777655310
Q ss_pred --------------------------------------------cHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHH
Q 015527 116 --------------------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDV 151 (405)
Q Consensus 116 --------------------------------------------~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~ 151 (405)
+...++++||.++||+++ +|+. +.|..+.+.
T Consensus 108 ~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvv--nG~~---~~G~~~~e~ 182 (202)
T 3gha_A 108 QPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYV--NDKV---IKNFADYDE 182 (202)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEE--TTEE---CSCTTCHHH
T ss_pred CccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEE---ecCCCCHHH
Confidence 001234578999999987 7843 678899999
Q ss_pred HHHHHHhhhcCCc
Q 015527 152 ISAWVREKMTLGT 164 (405)
Q Consensus 152 l~~~i~~~~~~~~ 164 (405)
|.+.|.+.+...+
T Consensus 183 l~~~i~~~~~~~~ 195 (202)
T 3gha_A 183 IKETIEKELKGKL 195 (202)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhhh
Confidence 9999988875443
No 383
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.45 E-value=9.9e-05 Score=68.79 Aligned_cols=105 Identities=16% Similarity=0.173 Sum_probs=77.3
Q ss_pred CccccccccccccccCC--ccEE-EEEecCCC-cHHHHHHHHHHHHHhc---C-----cEEEEEEEcCCcchhhhhhhhc
Q 015527 267 LVVTLTIHNAQFVFQDP--RKQL-WLFAPAYG-SDKVILTFEEVAKALK---G-----KLLHVYVEMNSEGVGRRVSQEF 334 (405)
Q Consensus 267 ~v~~l~~~~~~~~~~~~--~~~~-i~f~~~~~-~~~~~~~~~~va~~~~---~-----~~~f~~id~~~~~~~~~~~~~~ 334 (405)
.+..++..+|..+.... ++++ .||++||. |+.+.+.+.++++++. + ++.|+.+|++... .+++.|
T Consensus 24 ~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~---~la~~y 100 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV---DLCRKY 100 (470)
T ss_dssp TEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH---HHHHHT
T ss_pred CcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH---HHHHHc
Confidence 46788889998877654 3444 46778887 9999999999999997 3 5999999999754 899999
Q ss_pred CCCCCCCcEEEEEeCCC--ccccCCCC------------CCHHHHHHHHHHHhcCc
Q 015527 335 GVSGNAPRVIAYSARDA--KKYVLNGE------------LTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 335 gi~~~~~p~i~i~~~~~--~~y~~~~~------------~~~~~l~~Fi~~~~~Gk 376 (405)
++.. .|.+++++.++ ....+.|. ++.+++...++.+++.+
T Consensus 101 ~V~~--~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link~ 154 (470)
T 3qcp_A 101 DINF--VPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNKH 154 (470)
T ss_dssp TCCS--SCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCc--cCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhhc
Confidence 9975 78888876522 23344543 56666766666665443
No 384
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.41 E-value=0.00058 Score=58.20 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=70.2
Q ss_pred CccccCChhHHHHHhcc---CCeEEEEEEcCCCCcc---HHHHHHHhccCCcceEEEecCH--HHHhhcCCCCCCCCCeE
Q 015527 163 GTYSITTTDEAERILTV---ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTTSA--DVAEFFHIHPKSKRPAL 234 (405)
Q Consensus 163 ~~~~i~~~~~~~~~l~~---~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~~~--~l~~~~~~~~~~~~p~i 234 (405)
.+..+.+.+++...+.. +..++|.|+++||.++ .+.+..++.....+.|+.+... .++..|++.. .|++
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~~~l~~~~~I~~---~PTl 189 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKIKASNTGAGDRFSSDV---LPTL 189 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHHHCCTTSSCTTT---CSEE
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEEeCCcHHHHHHCCCCC---CCEE
Confidence 45667677888887743 6789999999999984 4556677755566888877443 3777899984 9999
Q ss_pred EEeecCCCccccccC-------CCCHHHHHHHHhccC
Q 015527 235 IFLHLEAGKATPFRH-------QFTRLAIANFVTHTK 264 (405)
Q Consensus 235 ~~~~~~~~~~~~y~g-------~~~~~~l~~fi~~~~ 264 (405)
++|+.+. ....+.| .++.+.|..||..+.
T Consensus 190 l~~~~G~-~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 190 LVYKGGE-LLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEETTE-EEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEECCE-EEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 9998643 2222222 256788999998764
No 385
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.35 E-value=0.0021 Score=51.03 Aligned_cols=92 Identities=13% Similarity=0.089 Sum_probs=65.1
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcc-hhhhhhhhc-----------------------C
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEG-VGRRVSQEF-----------------------G 335 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~-~~~~~~~~~-----------------------g 335 (405)
++++++ ++..+|. |....+.+.+++++++++ +.|+.++.++.. -...+++.+ |
T Consensus 34 gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3or5_A 34 GKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGG 113 (165)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTTC
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhccC
Confidence 344444 5556776 999999999999999876 999999887642 011222222 4
Q ss_pred CCCCCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcCc
Q 015527 336 VSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 336 i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
+. ..|.+++++.+|+ .+.+.|..+.+.+.++|+++++..
T Consensus 114 i~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 114 IT--GIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp SC--SSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC--
T ss_pred CC--CCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhh
Confidence 54 3789888877554 456778889999999999998764
No 386
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.43 E-value=3.2e-05 Score=59.26 Aligned_cols=93 Identities=10% Similarity=0.147 Sum_probs=70.9
Q ss_pred cCCccE-EEEEecCCC-cHHHHHHH---HHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeC-CCc--
Q 015527 281 QDPRKQ-LWLFAPAYG-SDKVILTF---EEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAK-- 352 (405)
Q Consensus 281 ~~~~~~-~i~f~~~~~-~~~~~~~~---~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~-~~~-- 352 (405)
..++++ +.++.+||. |....+.+ .++++.+.+++.|+.+|.+... +..+++.||+.. .|.+++++. +|+
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~v~~--~Pt~~~~d~~~G~~~ 93 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPE-GQELARRYRVPG--TPTFVFLVPKAGAWE 93 (130)
Confidence 334444 446677877 88888888 8999988888999999986443 457889999875 789888864 344
Q ss_pred -cccCCCCCCHHHHHHHHHHHhcCc
Q 015527 353 -KYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 353 -~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
...+.|..+.+.+.+||+.++++.
T Consensus 94 ~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 94 EVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 345778888999999999988763
No 387
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=97.28 E-value=0.0027 Score=49.60 Aligned_cols=95 Identities=15% Similarity=0.127 Sum_probs=68.8
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc---------------------hhhhhhhhcCCCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG---------------------VGRRVSQEFGVSG 338 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~---------------------~~~~~~~~~gi~~ 338 (405)
++++++ ++..||. |......+.++++++++ ++.++.++.++.. -...+.+.||..-
T Consensus 24 gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 103 (151)
T 3raz_A 24 APVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTV 103 (151)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCS
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCcc
Confidence 345444 5667776 99999999999999964 5899998876321 0234667777322
Q ss_pred CCCcEEEEEeCCC-ccccCCCCCCHHHHHHHHHHHhcCce
Q 015527 339 NAPRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 339 ~~~p~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
...|.+++++.+| ..+.+.|..+.+.+.++|+.+.+++-
T Consensus 104 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 104 GVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp CCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC--
T ss_pred CCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHhh
Confidence 3478888887744 45678899999999999999998854
No 388
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.00063 Score=51.55 Aligned_cols=70 Identities=17% Similarity=0.243 Sum_probs=44.4
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccH-h----HHHhCCCcccceEEEEeCCe
Q 015527 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-D----LAKEYNILAYPTLYLFVAGV 138 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~-~----~~~~~~i~~~Pt~~~~~~g~ 138 (405)
++|++++..++ ++.|..+||++|++....|.+.. .+.-.+..+.||.+.++ . +.+..|..++|+++ -+|+
T Consensus 5 ~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~~-~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~If--I~G~ 79 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSKSTCSYSKGMKELLENEY-QFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLL--VNGV 79 (127)
T ss_dssp HHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHHE-EEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE--ETTE
T ss_pred HHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHhc-ccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEE--ECCE
Confidence 46777776654 66789999999999998887731 11213444444443322 2 33445888999984 4663
No 389
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.24 E-value=0.0016 Score=54.93 Aligned_cols=92 Identities=14% Similarity=0.184 Sum_probs=64.0
Q ss_pred CCCcEEEEEecCCChhHhhhHHH-HHHHHHHc--cCCcEEEEEeCc----------------------------------
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPE-FAAAAKML--KGEADLVMVDAY---------------------------------- 114 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~-~~~~~~~~--~~~v~~~~v~~~---------------------------------- 114 (405)
..+++++.|....|++|+++.+. +.++.++| .++|.+...+.-
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~~~~s~~Aa~aa~aa~~~~~f~~~~~aLF~~q~~ 117 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDS 117 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCCSHHHHHHHHHGGGCCSHHHHHHHHHHHHHTGGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCCCChhHHHHHHHHHHhhChHHHHHHHHHHHHhCHh
Confidence 35678999999999999999986 47787777 345666544320
Q ss_pred -------c---------------------------------cHhHHHh-CCCcccceEEEEe-CCeee-----eeecCCC
Q 015527 115 -------L---------------------------------EKDLAKE-YNILAYPTLYLFV-AGVRQ-----FQFFGER 147 (405)
Q Consensus 115 -------~---------------------------------~~~~~~~-~~i~~~Pt~~~~~-~g~~~-----~~~~g~~ 147 (405)
. +...+++ +||.++||+++.. +|+.. ....|..
T Consensus 118 ~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~ 197 (226)
T 3f4s_A 118 WNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYK 197 (226)
T ss_dssp SCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCC
T ss_pred hcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHcCCCcCCEEEEEcCCCEEeeCCCCccccccc
Confidence 0 0012456 8999999999876 77432 1234555
Q ss_pred CHHHHHHHHHhhhcCC
Q 015527 148 TRDVISAWVREKMTLG 163 (405)
Q Consensus 148 ~~~~l~~~i~~~~~~~ 163 (405)
+.+.+.+.|.+.+...
T Consensus 198 ~~e~l~~~I~~~l~~~ 213 (226)
T 3f4s_A 198 ELKYFTNVIDKLYGKA 213 (226)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC
Confidence 5999999998887543
No 390
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.24 E-value=0.0018 Score=43.92 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=56.0
Q ss_pred EEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCC-CHH
Q 015527 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGEL-TLS 363 (405)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~-~~~ 363 (405)
.+.+|.+|+. |+...+.++++++++.+++.++.+| . .++++.||+.. .|.+++ +|+.... |.. +.+
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~---~~~~~~~~v~~--~Pt~~~---~G~~~~~-G~~~~~~ 70 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---E---MDQILEAGLTA--LPGLAV---DGELKIM-GRVASKE 70 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---S---HHHHHHHTCSS--SSCEEE---TTEEEEC-SSCCCHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---C---HHHHHHCCCCc--CCEEEE---CCEEEEc-CCCCCHH
Confidence 3567888887 9999999999999999889999998 2 26788999975 688877 3433222 765 888
Q ss_pred HHHHHH
Q 015527 364 SIKSFG 369 (405)
Q Consensus 364 ~l~~Fi 369 (405)
+|.+|+
T Consensus 71 ~l~~~l 76 (77)
T 1ilo_A 71 EIKKIL 76 (77)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 888875
No 391
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.21 E-value=0.0018 Score=50.71 Aligned_cols=93 Identities=16% Similarity=0.142 Sum_probs=68.2
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc-------------------hhhhhhhhcCCCCCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG-------------------VGRRVSQEFGVSGNA 340 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~-------------------~~~~~~~~~gi~~~~ 340 (405)
+++.++ ++..||. |......+.+++.++.+ ++.|+.++.+... -...+.+.||+..
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-- 103 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP-- 103 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS--
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC--
Confidence 344444 5556776 89999999999999986 4888888876421 0236778888864
Q ss_pred CcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcCce
Q 015527 341 PRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 341 ~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
.|.+++++.+|+ .+.+.|..+.+.|.++|+.++++.-
T Consensus 104 ~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC--
T ss_pred CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhh
Confidence 688888877544 4556788899999999999998843
No 392
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.21 E-value=0.0013 Score=51.91 Aligned_cols=90 Identities=12% Similarity=0.034 Sum_probs=67.6
Q ss_pred CccEEEEE--ecCCC-cHHHHHHH---HHHHHHhcCcEEEEEEEcCCcc--------hhhhhhhhcCCCCCCCcEEEEEe
Q 015527 283 PRKQLWLF--APAYG-SDKVILTF---EEVAKALKGKLLHVYVEMNSEG--------VGRRVSQEFGVSGNAPRVIAYSA 348 (405)
Q Consensus 283 ~~~~~i~f--~~~~~-~~~~~~~~---~~va~~~~~~~~f~~id~~~~~--------~~~~~~~~~gi~~~~~p~i~i~~ 348 (405)
++++++.| .+||. |....+.+ .++++.+..++.++.+|.++.. -+..+++.|++.. .|.+++++
T Consensus 47 gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~--~Pt~~~~d 124 (154)
T 2ju5_A 47 HKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG--FPELVFID 124 (154)
T ss_dssp CCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS--SSEEEEEC
T ss_pred CCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCC--CCEEEEEc
Confidence 44666655 57887 88888888 7787766677999999987631 1347889999975 78999997
Q ss_pred CCC-ccccCCCCC--CHHHHHHHHHHHhcC
Q 015527 349 RDA-KKYVLNGEL--TLSSIKSFGEEFLED 375 (405)
Q Consensus 349 ~~~-~~y~~~~~~--~~~~l~~Fi~~~~~G 375 (405)
.+| ..+.+ |.. +.+.+.++|+.+++.
T Consensus 125 ~~G~~~~~~-G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 125 AEGKQLARM-GFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp TTCCEEEEE-CCCTTCHHHHHHHHHHHHTC
T ss_pred CCCCEEEEe-cCCCCCHHHHHHHHHHHHhc
Confidence 744 44556 766 899999999998764
No 393
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=97.15 E-value=0.0019 Score=49.91 Aligned_cols=86 Identities=13% Similarity=0.165 Sum_probs=64.4
Q ss_pred CCccEEE-EEecCCC-cHHHHHHHHHHHHHhc-CcEEEEEEEcCC-----------------------cchhhhhhhhcC
Q 015527 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALK-GKLLHVYVEMNS-----------------------EGVGRRVSQEFG 335 (405)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~-~~~~f~~id~~~-----------------------~~~~~~~~~~~g 335 (405)
.++++++ ++..+|. |....+.+.++++++. .++.|+.++.+. .. ...+.+.||
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDS-KGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECS-SSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcC-chhHHHhcC
Confidence 3445555 5556676 8999999999999998 569999998764 11 336788888
Q ss_pred CCCCCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHH
Q 015527 336 VSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGE 370 (405)
Q Consensus 336 i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~ 370 (405)
+.. .|.+++++.+|+ .+.+.|..+.+.+.++|+
T Consensus 112 v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 112 IIT--IPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CCE--ESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred cCc--cCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 864 789889877554 456788889999998874
No 394
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=97.14 E-value=0.0026 Score=49.67 Aligned_cols=91 Identities=13% Similarity=0.097 Sum_probs=67.8
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcc--h------------------hhhhhhhcCCCCCC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEG--V------------------GRRVSQEFGVSGNA 340 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~--~------------------~~~~~~~~gi~~~~ 340 (405)
++.++ ++..+|. |......+.++++++.++ +.|+.++.+... + ...+.+.||+..
T Consensus 31 k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-- 108 (152)
T 2lja_A 31 KYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING-- 108 (152)
T ss_dssp SEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS--
T ss_pred CEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC--
Confidence 35545 4556676 899999999999999874 999999877642 0 125677888864
Q ss_pred CcEEEEEeCCC-ccccCCCCCCHHHHHHHHHHHhcCc
Q 015527 341 PRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 341 ~p~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
.|.+++++.+| ..+.+.+..+.+.|.++|+.+.++.
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 68888888644 4455677889999999999998763
No 395
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.12 E-value=0.0035 Score=49.02 Aligned_cols=93 Identities=13% Similarity=0.106 Sum_probs=67.3
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCc--------------------chhhhhhhhcCCCCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSE--------------------GVGRRVSQEFGVSGN 339 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~--------------------~~~~~~~~~~gi~~~ 339 (405)
+++.++ ++..+|. |....+.+.++++++.++ +.++.++.+.. .-...+.+.||+..
T Consensus 28 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~- 106 (153)
T 2l5o_A 28 GKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV- 106 (153)
T ss_dssp TCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS-
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc-
Confidence 344444 5567776 999999999999999864 77777653210 00336788899864
Q ss_pred CCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcCce
Q 015527 340 APRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 340 ~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
.|.+++++.+|+ .+.+.|..+.+.|.++|+.++.+.-
T Consensus 107 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~ 144 (153)
T 2l5o_A 107 -YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSD 144 (153)
T ss_dssp -SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred -cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhh
Confidence 688888877444 4557788899999999999998744
No 396
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.10 E-value=0.0037 Score=50.62 Aligned_cols=87 Identities=10% Similarity=0.227 Sum_probs=60.9
Q ss_pred CCCcEEEEEe-cCCChhHh-hhHHHHHHHHHHc-cC-CcE-EEEEeCcc----------------------cHhHHHhCC
Q 015527 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKML-KG-EAD-LVMVDAYL----------------------EKDLAKEYN 124 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~-~~~~~~~~~~~~~-~~-~v~-~~~v~~~~----------------------~~~~~~~~~ 124 (405)
.++.+++.|| +.||+.|- .+.+.|.+.+.++ +. ++. ++.|.++. +.++++.||
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yG 121 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMN 121 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhC
Confidence 4566777666 68999999 8999999999988 55 563 66666532 346788888
Q ss_pred Cc-----------ccceEEEEeCCeeeeeecC-------------CCCHHHHHHHHHh
Q 015527 125 IL-----------AYPTLYLFVAGVRQFQFFG-------------ERTRDVISAWVRE 158 (405)
Q Consensus 125 i~-----------~~Pt~~~~~~g~~~~~~~g-------------~~~~~~l~~~i~~ 158 (405)
+. ....++++++|++...+.. ..+++++.++|++
T Consensus 122 v~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 122 MLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp CEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred CceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 63 2466778889976655432 2457777777653
No 397
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=97.04 E-value=0.005 Score=48.90 Aligned_cols=89 Identities=8% Similarity=0.114 Sum_probs=63.8
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcC------------------Ccc-h---------------
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMN------------------SEG-V--------------- 326 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~------------------~~~-~--------------- 326 (405)
+++.++ ++..+|. |......+.+++++++ ++.|+.++.+ +.. -
T Consensus 37 gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (165)
T 3ha9_A 37 GDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIM 115 (165)
T ss_dssp SSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEE
T ss_pred CCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeE
Confidence 344444 5667776 9999999999999999 8999999876 210 0
Q ss_pred ---hhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCC-CHHHHHHHHHHHhcC
Q 015527 327 ---GRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGEL-TLSSIKSFGEEFLED 375 (405)
Q Consensus 327 ---~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~-~~~~l~~Fi~~~~~G 375 (405)
...+.+.||+.. .|.+++++.+|+... .|.. +.+.|.++|+.++.|
T Consensus 116 ~~d~~~~~~~~~v~~--~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 116 VMDDGSLVEKFNVRS--IDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQGG 165 (165)
T ss_dssp EECCSHHHHHTTCCS--SSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC---
T ss_pred EeChHHHHHHhCCCC--ceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHhcC
Confidence 025667788764 688888887555444 6666 899999999998876
No 398
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=96.96 E-value=0.0011 Score=48.64 Aligned_cols=73 Identities=10% Similarity=-0.078 Sum_probs=51.5
Q ss_pred CeEEEEEEcCCCCccHHHHHHHhccCCcceEEEe-------cCHHHHhhcCCCCCCCCCeEEEeecCCCccccccCCCCH
Q 015527 181 SKLVLGFLHDLEGMESEELAAASKLHSDVNFYQT-------TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTR 253 (405)
Q Consensus 181 ~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~-------~~~~l~~~~~~~~~~~~p~i~~~~~~~~~~~~y~g~~~~ 253 (405)
+..+|.|+++||.++......+.++...+.+..+ .+.+++++|++.. +|++++ ++ . .|.|..+.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~~v~~~~~~~~~~~~~l~~~~~V~~---~PT~~i--~G--~--~~~G~~~~ 83 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITS---YPTWII--NG--R--TYTGVRSL 83 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSCEEESCTTCTTSCCCHHHHHTTCCS---SSEEEE--TT--E--EEESCCCH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCCEEEEecccccchhHHHHHHcCCeE---eCEEEE--CC--E--EecCCCCH
Confidence 3457889999999876654444433333434333 2567999999994 999877 22 2 48899999
Q ss_pred HHHHHHHhc
Q 015527 254 LAIANFVTH 262 (405)
Q Consensus 254 ~~l~~fi~~ 262 (405)
++|.+|+..
T Consensus 84 ~~l~~~~~~ 92 (106)
T 3kp8_A 84 EALAVASGY 92 (106)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhCC
Confidence 999999864
No 399
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.95 E-value=0.0011 Score=50.85 Aligned_cols=67 Identities=19% Similarity=0.332 Sum_probs=45.2
Q ss_pred hhHHHHHcCCCcEEEEEec----CCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHH----hCCCcccceEEEEe
Q 015527 64 KNFSEFMGKNRNVMVMFYA----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK----EYNILAYPTLYLFV 135 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a----~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~----~~~i~~~Pt~~~~~ 135 (405)
+.+++.+..+ .++|+.++ +||++|++....|.+. ++.|..+|++.++++.+ ..|..++|.+ |-
T Consensus 26 ~~v~~~i~~~-~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~V--fI 96 (135)
T 2wci_A 26 EKIQRQIAEN-PILLYMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYANWPTFPQL--WV 96 (135)
T ss_dssp HHHHHHHHHC-SEEEEESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EE
T ss_pred HHHHHHhccC-CEEEEEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHCCCCcCEE--EE
Confidence 4455566544 45554444 8999999988877653 46788888887765543 3578889986 45
Q ss_pred CCee
Q 015527 136 AGVR 139 (405)
Q Consensus 136 ~g~~ 139 (405)
+|+.
T Consensus 97 ~G~~ 100 (135)
T 2wci_A 97 DGEL 100 (135)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 7743
No 400
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=96.94 E-value=0.0087 Score=46.25 Aligned_cols=88 Identities=10% Similarity=0.092 Sum_probs=63.6
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHh-cCc-EEEEEEEcCCcc----------------------hhhhhhhhcCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKAL-KGK-LLHVYVEMNSEG----------------------VGRRVSQEFGV 336 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~-~~~-~~f~~id~~~~~----------------------~~~~~~~~~gi 336 (405)
+++.++ ++..+|. |......+.++++++ .++ +.++.++.+... ....+++.||+
T Consensus 33 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 112 (148)
T 3fkf_A 33 NRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAI 112 (148)
T ss_dssp TSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC
T ss_pred CcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCC
Confidence 344444 5667776 999999999999999 765 889888776531 02367889998
Q ss_pred CCCCCcEEEEEeCCCcc-ccCCCCCCHHHHHHHHHHHhcC
Q 015527 337 SGNAPRVIAYSARDAKK-YVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 337 ~~~~~p~i~i~~~~~~~-y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.. .|.+++++.+|+. +... +.+.+.++++.+++.
T Consensus 113 ~~--~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 113 LT--LPTNILLSPTGKILARDI---QGEALTGKLKELLKT 147 (148)
T ss_dssp CS--SSEEEEECTTSBEEEESC---CHHHHHHHHHHHC--
T ss_pred CC--cCEEEEECCCCeEEEecC---CHHHHHHHHHHHHcc
Confidence 74 7898888775543 3333 889999999998764
No 401
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=96.93 E-value=0.0023 Score=50.17 Aligned_cols=87 Identities=13% Similarity=0.047 Sum_probs=65.6
Q ss_pred EEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcC--Cc----------------------chhhhhhhhcCCCCCC
Q 015527 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMN--SE----------------------GVGRRVSQEFGVSGNA 340 (405)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~--~~----------------------~~~~~~~~~~gi~~~~ 340 (405)
++.++..+|. |....+.+.++++++ ++.|+.++.+ +. .-...+.+.||+..
T Consensus 34 ll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~-- 109 (154)
T 3ia1_A 34 VIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG-- 109 (154)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS--
T ss_pred EEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc--
Confidence 4445666776 899999999999999 6788888771 10 01457788899864
Q ss_pred CcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcCc
Q 015527 341 PRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 341 ~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
.|.+++++.+|+ .+.+.|..+.++|.++|++...+.
T Consensus 110 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred ccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 789888877554 456778889999999999998764
No 402
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=96.84 E-value=0.0034 Score=50.36 Aligned_cols=89 Identities=11% Similarity=0.116 Sum_probs=62.3
Q ss_pred cCCccEEE-EEecCCC-cHHHHHHH---HHHHHHhcCcEEEEEEEcCCcchhhhh-------------------------
Q 015527 281 QDPRKQLW-LFAPAYG-SDKVILTF---EEVAKALKGKLLHVYVEMNSEGVGRRV------------------------- 330 (405)
Q Consensus 281 ~~~~~~~i-~f~~~~~-~~~~~~~~---~~va~~~~~~~~f~~id~~~~~~~~~~------------------------- 330 (405)
..++++++ ++++||. |......+ .++.+.+++++.|+.+|.++.. .+
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKT---PLTEPVKIMENGTERTLRTVGDKWSYL 121 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCC---EEEEEEEEEETTEEEEEEEHHHHHHHH
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCccc---ccchhhhhhhcchhhhhhhhhhhhhHH
Confidence 34455555 6778887 87753333 5666666668999999987643 22
Q ss_pred -hhhcCCCCCCCcEEEEEeCCCc-cccCCCCCC-HHHHHHHHHHHhc
Q 015527 331 -SQEFGVSGNAPRVIAYSARDAK-KYVLNGELT-LSSIKSFGEEFLE 374 (405)
Q Consensus 331 -~~~~gi~~~~~p~i~i~~~~~~-~y~~~~~~~-~~~l~~Fi~~~~~ 374 (405)
.+.||+.. .|.+++++.+|+ .+.+.|..+ .+.+.+|++..++
T Consensus 122 ~~~~~~v~~--~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 122 QRVKFGANA--QPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp HHHHHSCCC--SSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCC--cceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 57888874 789999977444 455678777 9999999988764
No 403
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=96.82 E-value=0.0088 Score=46.69 Aligned_cols=90 Identities=14% Similarity=0.073 Sum_probs=65.5
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcc--h--------------------hhhhhhhcCCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEG--V--------------------GRRVSQEFGVS 337 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~--~--------------------~~~~~~~~gi~ 337 (405)
++++++ ++..||. |......+.++++++.++ +.++.++.+... + ...+.+.||+.
T Consensus 29 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (152)
T 2lrn_A 29 GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV 108 (152)
T ss_dssp TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC
Confidence 344444 5666776 999999999999999875 999999887521 0 24677889986
Q ss_pred CCCCcEEEEEeCCCcc-ccCCCCCCHHHHHHHHHHHhcCce
Q 015527 338 GNAPRVIAYSARDAKK-YVLNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 338 ~~~~p~i~i~~~~~~~-y~~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
. .|.+++++.+|+. +.+ .+.+++.++|+.++++..
T Consensus 109 ~--~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~~~~ 144 (152)
T 2lrn_A 109 G--FPHIILVDPEGKIVAKE---LRGDDLYNTVEKFVNGAK 144 (152)
T ss_dssp S--SCEEEEECTTSEEEEEC---CCTTHHHHHHHHHHTSSS
T ss_pred c--CCeEEEECCCCeEEEee---CCHHHHHHHHHHHHhhcc
Confidence 4 7888888775543 333 356899999999988743
No 404
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=96.74 E-value=0.0093 Score=46.91 Aligned_cols=91 Identities=9% Similarity=0.105 Sum_probs=65.6
Q ss_pred CccEEE-EEecCCC-cHH-HHHHHHHHHHHhcCc-EEEEEEEcCC-------c------------------chhhh----
Q 015527 283 PRKQLW-LFAPAYG-SDK-VILTFEEVAKALKGK-LLHVYVEMNS-------E------------------GVGRR---- 329 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~-~~~~~~~va~~~~~~-~~f~~id~~~-------~------------------~~~~~---- 329 (405)
++++++ ++..||. |.. ....+.+++++++++ +.++.++.+. . .-...
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRI 109 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchh
Confidence 344444 5667776 888 599999999999875 8888887520 0 00112
Q ss_pred --hhhhcCCCCCCCcEEEEEeCCC-ccccCCCCCCHHHHHHHHHHHhcC
Q 015527 330 --VSQEFGVSGNAPRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 330 --~~~~~gi~~~~~p~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
+.+.||+.. .|.+++++.+| ..+.+.|..+.+.+.++|+.+++.
T Consensus 110 ~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 110 PSTMKKYRLEG--TPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp CHHHHHTTCCS--SSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred hhHHHhcccCc--cceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 678888864 68888888744 455677888999999999999875
No 405
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=96.74 E-value=0.011 Score=46.02 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=64.8
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcc--h-----------------hhhhhhhcCCCCCCC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEG--V-----------------GRRVSQEFGVSGNAP 341 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~--~-----------------~~~~~~~~gi~~~~~ 341 (405)
++.++ ++..+|. |......+.+++.++.++ +.++.++.+... . ...+.+.||+.. .
T Consensus 29 k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~--~ 106 (152)
T 3gl3_A 29 SVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG--M 106 (152)
T ss_dssp SEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS--S
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC--C
Confidence 34444 5666777 999999999999999876 888888877532 0 114567788864 7
Q ss_pred cEEEEEeCCCc-cccCCC--CCCHHHHHHHHHHHhcCc
Q 015527 342 RVIAYSARDAK-KYVLNG--ELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 342 p~i~i~~~~~~-~y~~~~--~~~~~~l~~Fi~~~~~Gk 376 (405)
|.+++++.+|+ .+.+.| ..+.+.|.++|+..+.+.
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 88888877444 344555 456689999999998874
No 406
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=96.73 E-value=0.0015 Score=52.04 Aligned_cols=92 Identities=13% Similarity=0.080 Sum_probs=64.9
Q ss_pred cCCccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhh-hhhhcCCCCCCCcEEEEEeCCCcc-ccC
Q 015527 281 QDPRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRR-VSQEFGVSGNAPRVIAYSARDAKK-YVL 356 (405)
Q Consensus 281 ~~~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~-~~~~~gi~~~~~p~i~i~~~~~~~-y~~ 356 (405)
..+++++ .++.+||. |....+.|.+++..+..++.|+.+|.+... . +...+++.....|.+++++.+|+. ..+
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~---~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~ 120 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEE---EPKDEDFSPDGGYIPRILFLDPSGKVHPEI 120 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGG---SCSCGGGCTTCSCSSEEEEECTTSCBCTTC
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCc---hHHHHHhcccCCcCCeEEEECCCCCEEEEE
Confidence 3444544 46677887 999999999987776655667777777543 3 567888865568999999764443 335
Q ss_pred CC----------CCCHHHHHHHHHHHhcC
Q 015527 357 NG----------ELTLSSIKSFGEEFLED 375 (405)
Q Consensus 357 ~~----------~~~~~~l~~Fi~~~~~G 375 (405)
.| ..+.++|.++|+..++.
T Consensus 121 ~G~~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 121 INENGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp CCTTSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred eCCCCccchhcccCCHHHHHHHHHHHHHh
Confidence 44 27889999999988755
No 407
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=96.72 E-value=0.01 Score=44.99 Aligned_cols=88 Identities=15% Similarity=0.150 Sum_probs=63.7
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCc-------------------------chhhhhhhhcC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSE-------------------------GVGRRVSQEFG 335 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~-------------------------~~~~~~~~~~g 335 (405)
+++.++ ++..+|. |......+.++++++.+++.++.++.... .-...+.+.||
T Consensus 22 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 101 (138)
T 4evm_A 22 GKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYG 101 (138)
T ss_dssp TSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHTT
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHcC
Confidence 345555 4556666 89999999999999888898888853210 00235778888
Q ss_pred CCCCCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHH
Q 015527 336 VSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEF 372 (405)
Q Consensus 336 i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~ 372 (405)
+.. .|.+++++.+|+ .+.+.|..+.+++.++|+.+
T Consensus 102 v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 102 VRS--YPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp CCS--SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred ccc--CCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 864 689889877444 45677888999999998864
No 408
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=96.72 E-value=0.01 Score=47.97 Aligned_cols=93 Identities=5% Similarity=0.085 Sum_probs=64.0
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-E------EEEEEEcCC-c-chhhhhhhhcCC---------------
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-L------LHVYVEMNS-E-GVGRRVSQEFGV--------------- 336 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~------~f~~id~~~-~-~~~~~~~~~~gi--------------- 336 (405)
++++++ ++..||. |......+.+++++++++ + .|+.++.+. . .....+++.+++
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 138 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAAS 138 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHH
Confidence 344444 5666776 899999999999999865 7 999998876 2 212334344443
Q ss_pred ----CCCCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 337 ----SGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 337 ----~~~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.-...|..++++.+|+ .+.+.+..+.++|.++|+.+++.
T Consensus 139 ~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 139 LGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVDE 182 (183)
T ss_dssp TTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHHC
T ss_pred hccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhc
Confidence 1234687777777444 45677888999999999998753
No 409
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=96.65 E-value=0.0021 Score=51.01 Aligned_cols=106 Identities=14% Similarity=0.078 Sum_probs=68.4
Q ss_pred ccccccccccccccCCccEEE-EEecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCC---------------------
Q 015527 268 VVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNS--------------------- 323 (405)
Q Consensus 268 v~~l~~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~--------------------- 323 (405)
+..++...+......++++++ ++..||. |....+.+.+++++++. .+.++.++.+.
T Consensus 23 l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (164)
T 2h30_A 23 MKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPK 102 (164)
T ss_dssp CEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTT
T ss_pred cCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCc
Confidence 344444443332233445544 5556776 89999999999998743 35555554321
Q ss_pred c----chhhhhhhhcCCCCCCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 324 E----GVGRRVSQEFGVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 324 ~----~~~~~~~~~~gi~~~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
. .-...+++.||+.. .|.+++++.+|+ .+.+.|..+.+++.++|+.++..
T Consensus 103 ~~~~~d~~~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 103 LPVVTDNGGTIAQNLNISV--YPSWALIGKDGDVQRIVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp SCEEECTTCHHHHHTTCCS--SSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTCC
T ss_pred ceEEEcCchHHHHHcCCCc--cceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 0 00236777888864 789888877444 45577888999999999998753
No 410
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=96.64 E-value=0.013 Score=45.27 Aligned_cols=84 Identities=6% Similarity=0.090 Sum_probs=57.7
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcchh-----------------------hhhhhhcCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEGVG-----------------------RRVSQEFGV 336 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~~~-----------------------~~~~~~~gi 336 (405)
++++++ ++..+|. |......+.+++++++++ +.|+.++.+... . ..+.+.||+
T Consensus 31 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 31 AKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKD-EEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSS-HHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCH-HHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 344444 5667776 899999999999999876 999999887543 1 017778888
Q ss_pred CCCCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHH
Q 015527 337 SGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEF 372 (405)
Q Consensus 337 ~~~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~ 372 (405)
.. .|.+++++.+|+ .+.+.+. +++.++++.+
T Consensus 110 ~~--~P~~~lid~~G~i~~~~~g~---~~~~~~l~~l 141 (148)
T 3hcz_A 110 YA--TPVLYVLDKNKVIIAKRIGY---ENLDDFLVQY 141 (148)
T ss_dssp CS--SCEEEEECTTCBEEEESCCG---GGHHHHHHHH
T ss_pred CC--CCEEEEECCCCcEEEecCCH---HHHHHHHHHH
Confidence 64 789889887544 4455554 4455555544
No 411
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.60 E-value=0.0053 Score=42.93 Aligned_cols=55 Identities=7% Similarity=0.181 Sum_probs=39.2
Q ss_pred EEEEecC----CChhHhhhHHHHHHHHHHccCCcEEEEEeCc-----ccHh----HHHhCCCc-----ccceEEEEeCCe
Q 015527 77 MVMFYAN----WCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----LEKD----LAKEYNIL-----AYPTLYLFVAGV 138 (405)
Q Consensus 77 ~v~f~a~----~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~-----~~~~----~~~~~~i~-----~~Pt~~~~~~g~ 138 (405)
++.|+.+ ||++|++....|++. ++.+-.+|++ .+++ +.+..|.. ++|++++ .+|+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~~g~ 74 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-PDGS 74 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-TTSC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-ECCE
Confidence 4568899 999999988777652 4566777776 5533 55667888 8998753 3664
No 412
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=96.58 E-value=0.0028 Score=54.29 Aligned_cols=80 Identities=9% Similarity=0.018 Sum_probs=55.1
Q ss_pred CcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC--c----------------ccHhHHHhCCCccc--ceEEE
Q 015527 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA--Y----------------LEKDLAKEYNILAY--PTLYL 133 (405)
Q Consensus 74 ~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~--~----------------~~~~~~~~~~i~~~--Pt~~~ 133 (405)
...+..|++++|++|......+.+++..++ +....++. . ....+.+.+|.+++ |.+++
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~~--vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I 120 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKGD--VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL 120 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHTS--SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccCC--eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE
Confidence 367888999999999999999999987653 43222221 1 12346788999988 99755
Q ss_pred EeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
+|+. +.|..+.+.|.+.|.+..
T Consensus 121 --ng~~---~v~G~d~~~l~~~l~~~~ 142 (270)
T 2axo_A 121 --NGRD---HVKGADVRGIYDRLDAFK 142 (270)
T ss_dssp --TTTE---EEETTCHHHHHHHHHHHH
T ss_pred --CCEE---eecCCCHHHHHHHHHHhh
Confidence 6632 234446788888887654
No 413
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.54 E-value=0.0034 Score=46.26 Aligned_cols=64 Identities=19% Similarity=0.401 Sum_probs=43.2
Q ss_pred hHHHHHcCCCcEEEEEec-----CCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHH----hCCCcccceEEEEe
Q 015527 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK----EYNILAYPTLYLFV 135 (405)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a-----~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~----~~~i~~~Pt~~~~~ 135 (405)
.+++.++++ +++ .|.. +||++|++....|.+. ++.+..+|++.+++..+ ..|...+|.++ -
T Consensus 8 ~v~~~i~~~-~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~if--i 77 (111)
T 3zyw_A 8 RLKKLTHAA-PCM-LFMKGTPQEPRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLY--V 77 (111)
T ss_dssp HHHHHHTSS-SEE-EEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--E
T ss_pred HHHHHHhcC-CEE-EEEecCCCCCcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEE--E
Confidence 345555544 333 4667 9999999998877653 46677788877765543 34778899974 4
Q ss_pred CCe
Q 015527 136 AGV 138 (405)
Q Consensus 136 ~g~ 138 (405)
+|+
T Consensus 78 ~g~ 80 (111)
T 3zyw_A 78 SGE 80 (111)
T ss_dssp TTE
T ss_pred CCE
Confidence 673
No 414
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=96.52 E-value=0.016 Score=45.14 Aligned_cols=92 Identities=15% Similarity=0.190 Sum_probs=63.2
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCc-c-------------------hhhhhhhhcCCCCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSE-G-------------------VGRRVSQEFGVSGN 339 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~-~-------------------~~~~~~~~~gi~~~ 339 (405)
+++.++ ++..+|. |......+.++++++.+ ++.++.++.+.. . -...+.+.||+..
T Consensus 28 gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 106 (154)
T 3kcm_A 28 GQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG- 106 (154)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS-
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC-
Confidence 345444 5556676 88999999999999987 688888887763 0 0124778888864
Q ss_pred CCcEEEEEeCCCc-cccCCC--CCCHHHHHHHHHHHhcCc
Q 015527 340 APRVIAYSARDAK-KYVLNG--ELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 340 ~~p~i~i~~~~~~-~y~~~~--~~~~~~l~~Fi~~~~~Gk 376 (405)
.|.+++++.+|+ .+.+.| ..+.+++.++|+.+..+.
T Consensus 107 -~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 107 -VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp -BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC----
T ss_pred -CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHh
Confidence 787778877454 344555 357789999999887663
No 415
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=96.50 E-value=0.025 Score=45.89 Aligned_cols=39 Identities=13% Similarity=0.258 Sum_probs=29.7
Q ss_pred CCCcEEEEEecCCChhHhhhHHHH-HHHHHHccC--CcEEEE
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKMLKG--EADLVM 110 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~-~~~~~~~~~--~v~~~~ 110 (405)
..+++++.|+...|++|..+.+.+ ..+.+.|.+ +|.+..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~ 51 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQF 51 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 357889999999999999999998 567777742 455443
No 416
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.49 E-value=0.0065 Score=44.58 Aligned_cols=64 Identities=16% Similarity=0.342 Sum_probs=42.4
Q ss_pred hHHHHHcCCCcEEEEEec-----CCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccHhHHH----hCCCcccceEEEEe
Q 015527 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK----EYNILAYPTLYLFV 135 (405)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a-----~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~~~----~~~i~~~Pt~~~~~ 135 (405)
.+++.+.+++ ++| |.. |||++|++....|.+. ++.+-.+|++++++..+ ..|...+|.+ |-
T Consensus 10 ~v~~~i~~~~-Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~i--fi 79 (109)
T 3ipz_A 10 TLEKLVNSEK-VVL-FMKGTRDFPMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQGLKEYSNWPTFPQL--YI 79 (109)
T ss_dssp HHHHHHTSSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEE--EE
T ss_pred HHHHHHccCC-EEE-EEecCCCCCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHHCCCCCCeE--EE
Confidence 3455665554 444 444 4999999998887763 46677788877655433 3478899976 44
Q ss_pred CCe
Q 015527 136 AGV 138 (405)
Q Consensus 136 ~g~ 138 (405)
+|+
T Consensus 80 ~g~ 82 (109)
T 3ipz_A 80 GGE 82 (109)
T ss_dssp TTE
T ss_pred CCE
Confidence 674
No 417
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.47 E-value=0.0079 Score=45.04 Aligned_cols=65 Identities=14% Similarity=0.210 Sum_probs=42.5
Q ss_pred hHHHHHcCCCcEEEEEec----CCChhHhhhHHHHHHHHHHccCCcE---EEEEeCcccHhHH----HhCCCcccceEEE
Q 015527 65 NFSEFMGKNRNVMVMFYA----NWCYWSKKLAPEFAAAAKMLKGEAD---LVMVDAYLEKDLA----KEYNILAYPTLYL 133 (405)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a----~~C~~C~~~~~~~~~~~~~~~~~v~---~~~v~~~~~~~~~----~~~~i~~~Pt~~~ 133 (405)
.+++.+.+++ ++|+-.. |||++|+.....|.+. ++. |..+|++.++++. +..|...+|.++
T Consensus 8 ~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vf- 79 (121)
T 3gx8_A 8 AIEDAIESAP-VVLFMKGTPEFPKCGFSRATIGLLGNQ------GVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLY- 79 (121)
T ss_dssp HHHHHHHSCS-EEEEESBCSSSBCTTHHHHHHHHHHHH------TBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEE-
T ss_pred HHHHHhccCC-EEEEEeccCCCCCCccHHHHHHHHHHc------CCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEE-
Confidence 3456666554 4443333 4999999999888775 244 6777877776543 344778899974
Q ss_pred EeCCe
Q 015527 134 FVAGV 138 (405)
Q Consensus 134 ~~~g~ 138 (405)
-+|+
T Consensus 80 -I~g~ 83 (121)
T 3gx8_A 80 -VNKE 83 (121)
T ss_dssp -ETTE
T ss_pred -ECCE
Confidence 4674
No 418
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=96.45 E-value=0.01 Score=48.64 Aligned_cols=90 Identities=17% Similarity=0.140 Sum_probs=64.8
Q ss_pred EEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCc--------------------------chhhhhhhhcCC
Q 015527 286 QLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSE--------------------------GVGRRVSQEFGV 336 (405)
Q Consensus 286 ~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~--------------------------~~~~~~~~~~gi 336 (405)
+++ ++..+|. |......+.++++++.++ +.++.++.+.. .-...+.+.||+
T Consensus 49 vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 128 (196)
T 2ywi_A 49 TVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDA 128 (196)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTC
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCC
Confidence 445 4455666 889999999999999875 88888887420 002356777887
Q ss_pred CCCCCcEEEEEeCCCc-ccc---------CCCCCCHHHHHHHHHHHhcCce
Q 015527 337 SGNAPRVIAYSARDAK-KYV---------LNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 337 ~~~~~p~i~i~~~~~~-~y~---------~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
.. .|.+++++.+|+ .+. +.+..+.+.|.+.|+.+++++-
T Consensus 129 ~~--~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 177 (196)
T 2ywi_A 129 AC--TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRP 177 (196)
T ss_dssp CE--ESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCC
T ss_pred CC--CCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCC
Confidence 54 688888877444 344 4567789999999999998854
No 419
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.38 E-value=0.0096 Score=43.34 Aligned_cols=74 Identities=8% Similarity=0.047 Sum_probs=56.1
Q ss_pred EEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCCCHHH
Q 015527 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSS 364 (405)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~ 364 (405)
++++..++|. |+...+.+++++.++. +.|..+|.++.+ .+...||+. .|+++++. +|... ..+.++.+.
T Consensus 32 vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~---~l~~~ygv~---VP~l~~~~-dG~~v-~~g~~~~~~ 101 (107)
T 2fgx_A 32 LVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNE---HLTRLYNDR---VPVLFAVN-EDKEL-CHYFLDSDV 101 (107)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCH---HHHHHSTTS---CSEEEETT-TTEEE-ECSSCCCHH
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCH---HHHHHhCCC---CceEEEEE-CCEEE-EecCCCHHH
Confidence 4455556777 9999999999999875 888999998754 788889983 78887664 33332 346788899
Q ss_pred HHHHH
Q 015527 365 IKSFG 369 (405)
Q Consensus 365 l~~Fi 369 (405)
|.+||
T Consensus 102 L~~~L 106 (107)
T 2fgx_A 102 IGAYL 106 (107)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99987
No 420
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=96.35 E-value=0.0061 Score=42.63 Aligned_cols=76 Identities=5% Similarity=0.081 Sum_probs=55.1
Q ss_pred EEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCCCHHH
Q 015527 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSS 364 (405)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~ 364 (405)
++++..++|. |+...+.|++++.++ |..+|.++.+ ++...||+. .|++++ . +|.... +.++.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~---~l~~~~g~~---vPtl~~-~-~G~~v~--g~~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDA---ALESAYGLR---VPVLRD-P-MGRELD--WPFDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCH---HHHHHHTTT---CSEEEC-T-TCCEEE--SCCCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCH---HHHHHhCCC---cCeEEE-E-CCEEEe--CCCCHHH
Confidence 4566677877 999988888877654 6789998754 788899984 788776 3 344432 7789999
Q ss_pred HHHHHHHHhcCc
Q 015527 365 IKSFGEEFLEDK 376 (405)
Q Consensus 365 l~~Fi~~~~~Gk 376 (405)
|.+|++..++..
T Consensus 68 L~~~l~~~~~~~ 79 (87)
T 1ttz_A 68 LRAWLDAAPHAL 79 (87)
T ss_dssp HHHHHHTCC---
T ss_pred HHHHHHHHHHHH
Confidence 999998877654
No 421
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.29 E-value=0.0088 Score=42.39 Aligned_cols=55 Identities=5% Similarity=0.012 Sum_probs=38.4
Q ss_pred EEEEecCCChhH------hhhHHHHHHHHHHccCCcEEEEEeCcccHh----HHHhCC--CcccceEEEEeCCee
Q 015527 77 MVMFYANWCYWS------KKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYN--ILAYPTLYLFVAGVR 139 (405)
Q Consensus 77 ~v~f~a~~C~~C------~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~--i~~~Pt~~~~~~g~~ 139 (405)
++.|+.+||++| ++....+++ . ++.+-.+|++.+++ +.+..| ...+|.++ -+|+.
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~----~--~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~if--i~g~~ 70 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG----K--RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIV--NGNHY 70 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T--TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEE--ETTEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH----C--CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEE--ECCEE
Confidence 567899999999 666655543 2 57788888887644 444677 77899874 46643
No 422
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=96.27 E-value=0.018 Score=45.13 Aligned_cols=91 Identities=11% Similarity=0.043 Sum_probs=65.6
Q ss_pred CccEEE-EEecCCC-cHHH-HHHHHHHHHHhcC-cEEEEEEEcCCc-------------------------chhh-----
Q 015527 283 PRKQLW-LFAPAYG-SDKV-ILTFEEVAKALKG-KLLHVYVEMNSE-------------------------GVGR----- 328 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~-~~~~~~va~~~~~-~~~f~~id~~~~-------------------------~~~~----- 328 (405)
++++++ ++..||. |... ...+.++++++++ .+.|+.++.+.. .-..
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 345444 5667776 8885 8999999999984 588888875310 0011
Q ss_pred hhhhhcCCCCCCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 329 RVSQEFGVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 329 ~~~~~~gi~~~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.+.+.||+.. .|.+++++.+|+ .+.+.|..+.+.+.++|+.+++.
T Consensus 108 ~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 108 RTMAAYQMRG--TPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp HHHHHTTCCS--SSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHcCCCC--CCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 3678888854 788888887554 45677888999999999999875
No 423
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.24 E-value=0.01 Score=43.71 Aligned_cols=56 Identities=14% Similarity=0.138 Sum_probs=38.6
Q ss_pred EEEEEecCCChhHh------hhHHHHHHHHHHccCCcEEEEEeCcccHhH----HHhC--------CCcccceEEEEeCC
Q 015527 76 VMVMFYANWCYWSK------KLAPEFAAAAKMLKGEADLVMVDAYLEKDL----AKEY--------NILAYPTLYLFVAG 137 (405)
Q Consensus 76 ~~v~f~a~~C~~C~------~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~----~~~~--------~i~~~Pt~~~~~~g 137 (405)
.++.|+.+||++|+ +....+++ . ++.|..+|++.+++. .+.+ |...+|.++ -+|
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~----~--gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vf--i~g 80 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA----N--KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIF--NGD 80 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH----T--TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEE--ETT
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH----c--CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEE--ECC
Confidence 46678899999999 55555543 2 577888999877553 3343 677789874 466
Q ss_pred ee
Q 015527 138 VR 139 (405)
Q Consensus 138 ~~ 139 (405)
+.
T Consensus 81 ~~ 82 (111)
T 2ct6_A 81 RY 82 (111)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 424
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=96.23 E-value=0.016 Score=45.29 Aligned_cols=88 Identities=20% Similarity=0.219 Sum_probs=61.2
Q ss_pred CccEE-EEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcc--------------------hhhhhhhhcCCCCCC
Q 015527 283 PRKQL-WLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEG--------------------VGRRVSQEFGVSGNA 340 (405)
Q Consensus 283 ~~~~~-i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~--------------------~~~~~~~~~gi~~~~ 340 (405)
+++.+ .++..+|. |......+++++++ +++.|+.++.++.. -...+.+.||+..
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-- 117 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG-- 117 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS--
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc--
Confidence 34444 45666776 88888899988877 56888888754310 0235667788864
Q ss_pred CcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhc
Q 015527 341 PRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 341 ~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
.|.+++++.+|+ .+.+.|..+.+.+.++++.+++
T Consensus 118 ~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 118 VPETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp SCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred cCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 687777766444 4557788899999999988764
No 425
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=96.19 E-value=0.0047 Score=45.68 Aligned_cols=84 Identities=12% Similarity=-0.024 Sum_probs=59.8
Q ss_pred cEEEEEecCCC-cHHHHHHHHHHHHHhcCc-----EEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCC
Q 015527 285 KQLWLFAPAYG-SDKVILTFEEVAKALKGK-----LLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNG 358 (405)
Q Consensus 285 ~~~i~f~~~~~-~~~~~~~~~~va~~~~~~-----~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~ 358 (405)
.++.|+++||. |+.+.. .++..+... +.+..+|.+... ...+...+++. .+|.+++++.+.....+.|
T Consensus 21 ~LV~F~A~wC~~Ck~~~~---~i~~~~~~~a~~~~~~l~~vdv~~~~-~~~la~~~~V~--g~PT~i~f~~G~ev~Ri~G 94 (116)
T 3dml_A 21 RLLMFEQPGCLYCARWDA---EIAPQYPLTDEGRAAPVQRLQMRDPL-PPGLELARPVT--FTPTFVLMAGDVESGRLEG 94 (116)
T ss_dssp EEEEEECTTCHHHHHHHH---HTTTTGGGSHHHHHSCEEEEETTSCC-CTTCBCSSCCC--SSSEEEEEETTEEEEEEEC
T ss_pred EEEEEECCCCHHHHHHHH---HHHhhHHHhhhcccceEEEEECCCCC-chhHHHHCCCC--CCCEEEEEECCEEEeeecC
Confidence 45667778887 777653 444445433 678888888753 34666777876 3799999985434456888
Q ss_pred CCCHHHHHHHHHHHhc
Q 015527 359 ELTLSSIKSFGEEFLE 374 (405)
Q Consensus 359 ~~~~~~l~~Fi~~~~~ 374 (405)
....+.+.+|++.++.
T Consensus 95 ~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 95 YPGEDFFWPMLARLIG 110 (116)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 9999999999998865
No 426
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.02 E-value=0.016 Score=49.27 Aligned_cols=58 Identities=9% Similarity=0.142 Sum_probs=42.9
Q ss_pred CcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccH---hHHHhCCCcccceEEEEeCCee
Q 015527 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK---DLAKEYNILAYPTLYLFVAGVR 139 (405)
Q Consensus 74 ~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~---~~~~~~~i~~~Pt~~~~~~g~~ 139 (405)
...++.|+.+||++|++....+++. ++.+-.+|++.++ ++.+.+|..++|+++ .+|+.
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~--~~g~~ 229 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSGRTTVPQVF--IGGKH 229 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEE--ETTEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 4567778999999999998888753 3555666666543 477789999999974 46743
No 427
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=96.01 E-value=0.02 Score=45.71 Aligned_cols=74 Identities=8% Similarity=0.035 Sum_probs=52.3
Q ss_pred CCCcEEEEEe-cCCChhHhhhHHHHHHHHHHccC-CcE-EEEEeCcc-----------------------cHhHHHhCCC
Q 015527 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYNI 125 (405)
Q Consensus 72 ~~~~~~v~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~-~~~v~~~~-----------------------~~~~~~~~~i 125 (405)
.++.+++.|| +.||+.|..+.+.|.+.+.+++. ++. ++.|.++. +.++++.||+
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv 120 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGT 120 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCTTCCSEEEECTTSHHHHHHTC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeEEEEeCCchHHHHhCC
Confidence 4667777777 47999999999999999888875 564 76666543 3456777776
Q ss_pred c-----------ccceEEEEeCCeeeeeecC
Q 015527 126 L-----------AYPTLYLFVAGVRQFQFFG 145 (405)
Q Consensus 126 ~-----------~~Pt~~~~~~g~~~~~~~g 145 (405)
. ..-.++++++|++...+..
T Consensus 121 ~~~~~~~g~g~~~~R~tfvIddG~V~~~~v~ 151 (171)
T 2xhf_A 121 ELDSSKMLGNNRSRRYAMLIDDNKIRSVSTE 151 (171)
T ss_dssp BCCCHHHHSSCCBCCEEEEEETTEEEEEEET
T ss_pred ceeccccCCCcceEEEEEEEeCCEEEEEEEe
Confidence 3 2345666778866655543
No 428
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=95.99 E-value=0.011 Score=43.91 Aligned_cols=66 Identities=15% Similarity=0.286 Sum_probs=42.8
Q ss_pred hhHHHHHcCCCcEEEEEec-----CCChhHhhhHHHHHHHHHHccCCcE-EEEEeCcccHhHHH----hCCCcccceEEE
Q 015527 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEAD-LVMVDAYLEKDLAK----EYNILAYPTLYL 133 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a-----~~C~~C~~~~~~~~~~~~~~~~~v~-~~~v~~~~~~~~~~----~~~i~~~Pt~~~ 133 (405)
+.+++.+.+++ ++| |.. |||++|++....|.+. ++. +..+|+++++++.+ ..|...+|.+
T Consensus 11 ~~v~~~i~~~~-Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~v-- 80 (118)
T 2wem_A 11 EQLDALVKKDK-VVV-FLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQV-- 80 (118)
T ss_dssp HHHHHHHHHSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEE--
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeE--
Confidence 34556665554 444 555 4999999998877753 353 67777777665443 3478889997
Q ss_pred EeCCee
Q 015527 134 FVAGVR 139 (405)
Q Consensus 134 ~~~g~~ 139 (405)
|-+|+.
T Consensus 81 fI~g~~ 86 (118)
T 2wem_A 81 YLNGEF 86 (118)
T ss_dssp EETTEE
T ss_pred EECCEE
Confidence 446743
No 429
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=95.95 E-value=0.054 Score=42.38 Aligned_cols=86 Identities=15% Similarity=0.227 Sum_probs=58.3
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhc-CcEEEEEEEcCCc----------------chhhhhhhhcCCCCCCCcE
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALK-GKLLHVYVEMNSE----------------GVGRRVSQEFGVSGNAPRV 343 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~-~~~~f~~id~~~~----------------~~~~~~~~~~gi~~~~~p~ 343 (405)
++++++ ++..+|. |......+.++++++. .++.|+.++.+.. .-...+.+.||+.. .|.
T Consensus 41 gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~--~P~ 118 (158)
T 3hdc_A 41 GKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANR--LPD 118 (158)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCS--SSE
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCC--cce
Confidence 345444 5556776 8999999999999998 5699999988761 00236778898864 688
Q ss_pred EEEEeCCCc-cccCCC--CCCHHHHHHHHH
Q 015527 344 IAYSARDAK-KYVLNG--ELTLSSIKSFGE 370 (405)
Q Consensus 344 i~i~~~~~~-~y~~~~--~~~~~~l~~Fi~ 370 (405)
+++++.+|+ .+.+.| ..+.+++.+.+.
T Consensus 119 ~~lid~~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 119 TFIVDRKGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp EEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred EEEEcCCCCEEEEEeCCCccchHHHHHHHH
Confidence 888877444 455555 344455555443
No 430
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.95 E-value=0.068 Score=43.11 Aligned_cols=95 Identities=9% Similarity=0.036 Sum_probs=64.4
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhc-CcEEEEEEEcCCc--chhhhhhhhcCCCC-------------------
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALK-GKLLHVYVEMNSE--GVGRRVSQEFGVSG------------------- 338 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~-~~~~f~~id~~~~--~~~~~~~~~~gi~~------------------- 338 (405)
++++++ ++..||. |......+.+++++++ .++.++.++.+.. .-...+++.++++.
T Consensus 60 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 139 (186)
T 1jfu_A 60 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG 139 (186)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT
T ss_pred CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc
Confidence 344444 5556776 8899999999999998 5688888877653 11245667777641
Q ss_pred --CCCcEEEEEeCCCc-cccCCCC--CCHHHHHHHHHHHhcCce
Q 015527 339 --NAPRVIAYSARDAK-KYVLNGE--LTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 339 --~~~p~i~i~~~~~~-~y~~~~~--~~~~~l~~Fi~~~~~Gkl 377 (405)
...|.+++++.+|+ .+.+.|. .+.+++.++|+..+.++.
T Consensus 140 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~a 183 (186)
T 1jfu_A 140 RALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKAA 183 (186)
T ss_dssp CCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC---
T ss_pred ccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcccc
Confidence 14788888887544 4556564 357899999999988753
No 431
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=95.84 E-value=0.024 Score=45.97 Aligned_cols=92 Identities=11% Similarity=0.063 Sum_probs=63.7
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCc--------------------------chhhhhhhhcC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSE--------------------------GVGRRVSQEFG 335 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~--------------------------~~~~~~~~~~g 335 (405)
+++++ ++..+|. |......+.++++++.+++.++.++.+.. .-...+.+.||
T Consensus 34 k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 113 (188)
T 2cvb_A 34 PLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYR 113 (188)
T ss_dssp SEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTT
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHcC
Confidence 44444 5556666 88888999999999988788888887320 00235667788
Q ss_pred CCCCCCcEEEEEeCCCcc-cc--------CCCCCCHHHHHHHHHHHhcCce
Q 015527 336 VSGNAPRVIAYSARDAKK-YV--------LNGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 336 i~~~~~p~i~i~~~~~~~-y~--------~~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
+.. .|.+++++.+|+. +. +.+..+.++|.+.|+.+++|+-
T Consensus 114 v~~--~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 114 ALR--TPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp CCE--ESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred CCC--CCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCC
Confidence 753 6888888775443 33 1123478999999999998865
No 432
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=95.72 E-value=0.029 Score=44.49 Aligned_cols=88 Identities=11% Similarity=0.105 Sum_probs=59.4
Q ss_pred CCccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCc--------------------chhhhhhhhcCCCCC
Q 015527 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSE--------------------GVGRRVSQEFGVSGN 339 (405)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~--------------------~~~~~~~~~~gi~~~ 339 (405)
.+++.++ ++..||. |....+.+.+++++ ++.++.++.++. .-...+.+.||+..
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 125 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG- 125 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc-
Confidence 3444444 5666776 88888999998887 466666663221 00336777888864
Q ss_pred CCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhc
Q 015527 340 APRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 340 ~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
.|..++++.+|+ .+.+.|..+.+.+.++|+.+++
T Consensus 126 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 126 -APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp -SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred -cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 687667766444 4567788899999999888764
No 433
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.71 E-value=0.053 Score=42.32 Aligned_cols=89 Identities=16% Similarity=0.107 Sum_probs=63.2
Q ss_pred CccEEE-EEecCCC-cHHHHHHH---HHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCC-Ccc-cc
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTF---EEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARD-AKK-YV 355 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~---~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~-~~~-y~ 355 (405)
++++++ ++.+||. |+.+.... .+|+...+.++.++.+|.++.. +..+++.|++.. +|.+++++.+ |.. ..
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~-~~~l~~~y~v~~--~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEE-GQRYIQFYKLGD--FPYVSILDPRTGQKLVE 118 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHH-HHHHHHHHTCCS--SSEEEEECTTTCCCCEE
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHh-HHHHHHHcCCCC--CCEEEEEeCCCCcEeee
Confidence 445555 4556665 66654432 3666666668999999997755 667889999964 7999999874 533 33
Q ss_pred CCCCCCHHHHHHHHHHHhcC
Q 015527 356 LNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 356 ~~~~~~~~~l~~Fi~~~~~G 375 (405)
..+ ++.+++.++++.+++.
T Consensus 119 ~~g-~~~~~fl~~L~~~l~~ 137 (153)
T 2dlx_A 119 WHQ-LDVSSFLDQVTGFLGE 137 (153)
T ss_dssp ESS-CCHHHHHHHHHHHHHH
T ss_pred cCC-CCHHHHHHHHHHHHHh
Confidence 556 8999999999988754
No 434
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=95.63 E-value=0.056 Score=45.10 Aligned_cols=90 Identities=14% Similarity=0.196 Sum_probs=64.4
Q ss_pred EEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCc--------------------------chhhhhhhhcCC
Q 015527 286 QLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSE--------------------------GVGRRVSQEFGV 336 (405)
Q Consensus 286 ~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~--------------------------~~~~~~~~~~gi 336 (405)
+++ ++..+|. |......|.+++++++++ +.|+.++.++. .-...+.+.||+
T Consensus 62 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v 141 (218)
T 3u5r_E 62 LLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGA 141 (218)
T ss_dssp EEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTC
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCC
Confidence 444 4455665 888899999999999876 88998887421 002367788888
Q ss_pred CCCCCcEEEEEeCCCcc-cc--C-------CCCCCHHHHHHHHHHHhcCce
Q 015527 337 SGNAPRVIAYSARDAKK-YV--L-------NGELTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 337 ~~~~~p~i~i~~~~~~~-y~--~-------~~~~~~~~l~~Fi~~~~~Gkl 377 (405)
.. .|.+++++.+|+. |. + .+..+.+.|.+.|+.+++|+-
T Consensus 142 ~~--~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 142 AC--TPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp CE--ESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred CC--CCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 64 6888888874443 32 1 124678999999999999965
No 435
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=95.44 E-value=0.019 Score=45.94 Aligned_cols=96 Identities=10% Similarity=0.109 Sum_probs=62.8
Q ss_pred cccccccccCCccEEE-EEecCCC-cHHHHH-HH--HHHHHHhcCcEEEEEEEcCCcchhhhhhhhc--------CCCCC
Q 015527 273 IHNAQFVFQDPRKQLW-LFAPAYG-SDKVIL-TF--EEVAKALKGKLLHVYVEMNSEGVGRRVSQEF--------GVSGN 339 (405)
Q Consensus 273 ~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~-~~--~~va~~~~~~~~f~~id~~~~~~~~~~~~~~--------gi~~~ 339 (405)
.+.+......++|+++ ++++||. |+.+.. .| .++++.+++++.++.+|.++.+ .+.+.| |+..
T Consensus 29 ~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~---~l~~~y~~~~q~~~gv~g- 104 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERP---DIDNIYMTVCQIILGRGG- 104 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCH---HHHHHHHHHHHHHHSCCC-
T ss_pred HHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccC---cHHHHHHHHHHHHcCCCC-
Confidence 4555555555666666 5667887 877666 33 4778888778999999998753 555555 7754
Q ss_pred CCcEEEEEeCCCccc------cCCCCCCHHHHHHHHHHHh
Q 015527 340 APRVIAYSARDAKKY------VLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 340 ~~p~i~i~~~~~~~y------~~~~~~~~~~l~~Fi~~~~ 373 (405)
.|.+++++.+|+.. +..+..+.+.+.++++.+.
T Consensus 105 -~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~ 143 (173)
T 3ira_A 105 -WPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIK 143 (173)
T ss_dssp -SSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHH
T ss_pred -CcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHH
Confidence 79999998644432 2223445566666666654
No 436
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=95.42 E-value=0.025 Score=46.20 Aligned_cols=42 Identities=7% Similarity=0.150 Sum_probs=35.5
Q ss_pred CCcEEEEEecCCChhHhhhHHHH-HHHHHHccCCcEEEEEeCc
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEF-AAAAKMLKGEADLVMVDAY 114 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~-~~~~~~~~~~v~~~~v~~~ 114 (405)
.++++|.||..+|++|..+.+.+ .++.+.+.+++.+..+...
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 56789999999999999999999 9999988776777766644
No 437
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=95.42 E-value=0.064 Score=40.95 Aligned_cols=87 Identities=8% Similarity=0.114 Sum_probs=56.5
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHH---HHHHhcC-cEEEEEEEcCCcc-hhhhh--------------------hhhcC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEE---VAKALKG-KLLHVYVEMNSEG-VGRRV--------------------SQEFG 335 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~---va~~~~~-~~~f~~id~~~~~-~~~~~--------------------~~~~g 335 (405)
++++++ ++..||. |......+.+ +.+++++ .+.++.++.++.. -...+ .+.||
T Consensus 27 gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (142)
T 3ewl_A 27 AQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYD 106 (142)
T ss_dssp CSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcC
Confidence 345555 4556666 8888778777 8888865 4888888777532 00111 23667
Q ss_pred CCCCCCcEEEEEeCCCccccCCCCCCHHHHHHHHHHHh
Q 015527 336 VSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 336 i~~~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
+.. .|.+++++.+|+... +..+.++|.+++++..
T Consensus 107 v~~--~P~~~lid~~G~i~~--~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 107 IRA--TPTIYLLDGRKRVIL--KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CCS--SSEEEEECTTCBEEE--CSCCHHHHHHHHHC--
T ss_pred CCC--CCeEEEECCCCCEEe--cCCCHHHHHHHHHHHc
Confidence 654 688888887555432 4578999999998764
No 438
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=95.28 E-value=0.06 Score=48.49 Aligned_cols=91 Identities=12% Similarity=0.010 Sum_probs=66.3
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc------------------------hhhhhhhhcC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG------------------------VGRRVSQEFG 335 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~------------------------~~~~~~~~~g 335 (405)
++++++ ++..||. |......+.++++++++ .+.++.++++... -...+.+.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 344444 5666776 99999999999999986 4888888764310 0135677788
Q ss_pred CCCCCCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 336 VSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 336 i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
+.. .|.+++++.+|+ .+.+.|..+.+.+.++|+.+++.
T Consensus 162 V~~--~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 162 NRY--WPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLND 200 (352)
T ss_dssp CCE--ESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHH
T ss_pred CCc--cCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 754 688888877444 45577788899999999998854
No 439
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=95.25 E-value=0.33 Score=34.37 Aligned_cols=84 Identities=11% Similarity=0.180 Sum_probs=70.1
Q ss_pred EEEEEecCCChhHhhhHHHHHHHHHHcc--CCcEEEEEeCcccHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHH
Q 015527 76 VMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (405)
Q Consensus 76 ~~v~f~a~~C~~C~~~~~~~~~~~~~~~--~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (405)
...+|.|..-+.+......+.++-+.+. +.+.+-.||..++|.+++.++|-.+||++=.... ...+..|..-...+.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK~~P~-P~rriiGd~i~~ql~ 91 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVTPALVKIGPG-SRQVLSGIDLTDQLA 91 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTCCSSSEEEEEESS-SCEEEESSCHHHHHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCeeeccHhhccCCC-CceEEeChHHHHHHH
Confidence 4446777778888888888888766554 3799999999999999999999999999887775 778899998889999
Q ss_pred HHHHhhh
Q 015527 154 AWVREKM 160 (405)
Q Consensus 154 ~~i~~~~ 160 (405)
.|.-+--
T Consensus 92 ~wwprWq 98 (105)
T 1t4y_A 92 NQLPQWL 98 (105)
T ss_dssp HHHHHHH
T ss_pred HHhHHHH
Confidence 9986654
No 440
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=95.22 E-value=0.2 Score=41.26 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=34.9
Q ss_pred HHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 120 AKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 120 ~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
++++||.++||+++..+|+......|..+.+.+.+.|++.+.
T Consensus 162 a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~ 203 (208)
T 3kzq_A 162 AKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERII 203 (208)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHHH
T ss_pred HHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHHh
Confidence 345799999999998888777777898899999998887763
No 441
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=95.03 E-value=0.11 Score=41.45 Aligned_cols=88 Identities=7% Similarity=0.069 Sum_probs=60.2
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcc--------------------hhhhhhhhcCCCCCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEG--------------------VGRRVSQEFGVSGNA 340 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~--------------------~~~~~~~~~gi~~~~ 340 (405)
++++++ ++..||. |....+.+.+++++ .+.++.++.++.. -...+.+.||+..
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-- 132 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG-- 132 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS--
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC--
Confidence 344444 5566776 88888999998887 4666666632210 0235667778754
Q ss_pred CcEEEEEeC-CCccccCCCCCCHHHHHHHHHHHhcC
Q 015527 341 PRVIAYSAR-DAKKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 341 ~p~i~i~~~-~~~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.|..++++. +...+.+.|..+.+.+.++|+.+++.
T Consensus 133 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 168 (176)
T 3kh7_A 133 APETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQ 168 (176)
T ss_dssp SCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHHH
T ss_pred CCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 687778877 44456677888999999999988764
No 442
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=95.00 E-value=0.046 Score=42.61 Aligned_cols=76 Identities=5% Similarity=-0.071 Sum_probs=46.6
Q ss_pred HHHHHhccCCeEEEEEEcCCCCccHHHHHHHh------ccC-CcceEEEec--CHHHHhhcCCCCCCCCCeEEEeecCCC
Q 015527 172 EAERILTVESKLVLGFLHDLEGMESEELAAAS------KLH-SDVNFYQTT--SADVAEFFHIHPKSKRPALIFLHLEAG 242 (405)
Q Consensus 172 ~~~~~l~~~~~~~v~f~~~~~~~~~~~~~~~a------~~~-~~~~f~~~~--~~~l~~~~~~~~~~~~p~i~~~~~~~~ 242 (405)
.+......+++++|.|+++||+++...-..+. ... .++....+. ..++...+++. +.|++++++..+.
T Consensus 36 al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~---~~PT~~f~~~~G~ 112 (151)
T 3ph9_A 36 GLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQ---YVPRIMFVDPSLT 112 (151)
T ss_dssp HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCC---CSSEEEEECTTSC
T ss_pred HHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCC---CCCEEEEECCCCC
Confidence 34555567889999999999998655332221 111 123333332 23466778876 5899999985444
Q ss_pred ccccccCC
Q 015527 243 KATPFRHQ 250 (405)
Q Consensus 243 ~~~~y~g~ 250 (405)
......|.
T Consensus 113 ~v~~~~G~ 120 (151)
T 3ph9_A 113 VRADIAGR 120 (151)
T ss_dssp BCTTCCCS
T ss_pred EEEEEeCC
Confidence 44455555
No 443
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=94.69 E-value=0.18 Score=39.11 Aligned_cols=86 Identities=9% Similarity=0.055 Sum_probs=57.0
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcchh------------------h---hhhhhcCCCCC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEGVG------------------R---RVSQEFGVSGN 339 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~~~------------------~---~~~~~~gi~~~ 339 (405)
+++++ ++..||. |....+.+.+++++++++ +.++.++.+... . . .+.+.||+..
T Consensus 36 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~- 113 (152)
T 2lrt_A 36 KVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDE-HFWKTSADNLPWVCVRDANGAYSSYISLYNVTN- 113 (152)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCH-HHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS-
T ss_pred CEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCH-HHHHHHHhCCCceEEECCCCcchHHHHHcCccc-
Confidence 35444 5556666 889999999999999876 899999877642 0 0 1677888864
Q ss_pred CCcEEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 340 APRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 340 ~~p~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.|.+++++.+|+ .+.+.|..+ +.+.+...++|
T Consensus 114 -~P~~~lid~~G~i~~~~~g~~~---~e~~~~~~~~~ 146 (152)
T 2lrt_A 114 -LPSVFLVNRNNELSARGENIKD---LDEAIKKLLEG 146 (152)
T ss_dssp -CSEEEEEETTTEEEEETTTCSC---HHHHHHHHHGG
T ss_pred -CceEEEECCCCeEEEecCCHHH---HHHHHHHHHhc
Confidence 688888887554 445555444 33444444444
No 444
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=94.51 E-value=0.19 Score=38.42 Aligned_cols=69 Identities=9% Similarity=0.027 Sum_probs=49.9
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhc--CcEEEEEEEcCCcc---------------------hhhhhhhhcCCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALK--GKLLHVYVEMNSEG---------------------VGRRVSQEFGVS 337 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~--~~~~f~~id~~~~~---------------------~~~~~~~~~gi~ 337 (405)
++++++ ++..+|. |......+.+++++++ +++.++.++.+... -...+.+.||+.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 344444 5566776 9999999999999998 47888888877521 024677888886
Q ss_pred CCCCcEEEEEe-CCCcc
Q 015527 338 GNAPRVIAYSA-RDAKK 353 (405)
Q Consensus 338 ~~~~p~i~i~~-~~~~~ 353 (405)
. .|.+++++ .+|+.
T Consensus 108 ~--~P~~~lid~~~G~i 122 (144)
T 1i5g_A 108 S--IPTLVGVEADSGNI 122 (144)
T ss_dssp S--SSEEEEEETTTCCE
T ss_pred C--CCEEEEEECCCCcE
Confidence 4 78888888 54543
No 445
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=94.44 E-value=0.16 Score=40.05 Aligned_cols=69 Identities=7% Similarity=0.078 Sum_probs=51.1
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcC--cEEEEEEEcCCcchh----------------------hhhhhhcCC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKG--KLLHVYVEMNSEGVG----------------------RRVSQEFGV 336 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~--~~~f~~id~~~~~~~----------------------~~~~~~~gi 336 (405)
++++++ ++..||. |....+.+.++++++++ ++.++.++.+... . ..+.+.||+
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEE-DDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSH-HHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCH-HHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 344444 5667777 99999999999999985 6888888776542 1 477888998
Q ss_pred CCCCCcEEEEEeCC-Cccc
Q 015527 337 SGNAPRVIAYSARD-AKKY 354 (405)
Q Consensus 337 ~~~~~p~i~i~~~~-~~~y 354 (405)
.. .|.+++++.+ |+..
T Consensus 127 ~~--~Pt~~lid~~~G~iv 143 (165)
T 3s9f_A 127 ES--IPTLIGLNADTGDTV 143 (165)
T ss_dssp CS--SSEEEEEETTTCCEE
T ss_pred CC--CCEEEEEeCCCCEEE
Confidence 64 7888888864 5543
No 446
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=94.39 E-value=0.027 Score=44.85 Aligned_cols=79 Identities=5% Similarity=-0.119 Sum_probs=53.1
Q ss_pred EEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcC---CCCCCCcEEEEEeCCCccc-cCCCCC
Q 015527 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFG---VSGNAPRVIAYSARDAKKY-VLNGEL 360 (405)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~g---i~~~~~p~i~i~~~~~~~y-~~~~~~ 360 (405)
++.++++||. |....+.+.+++.++. ++.|..+|.+.. ..+...|+ +. ..|.+++++.+|... .+ +.
T Consensus 58 vv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~---~~~~~~~~~~~v~--~iPt~i~~~~~G~~~~~~-g~- 129 (167)
T 1z6n_A 58 LLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRA---EDDLRQRLALERI--AIPLVLVLDEEFNLLGRF-VE- 129 (167)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHH---HHHTTTTTTCSSC--CSSEEEEECTTCCEEEEE-ES-
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCC---HHHHHHHHHcCCC--CcCeEEEECCCCCEEEEE-cC-
Confidence 4446678887 9999999999999886 599999988753 36666675 53 478988888654432 23 22
Q ss_pred CHHHHHHHHHHH
Q 015527 361 TLSSIKSFGEEF 372 (405)
Q Consensus 361 ~~~~l~~Fi~~~ 372 (405)
.+..+.++++++
T Consensus 130 ~p~~~~~~i~~~ 141 (167)
T 1z6n_A 130 RPQAVLDGGPQA 141 (167)
T ss_dssp SCHHHHHHCHHH
T ss_pred CCHHHHHhHHHH
Confidence 224444445444
No 447
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=94.30 E-value=0.16 Score=38.87 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=49.1
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhc--CcEEEEEEEcCCcc---------------------hhhhhhhhcCCCC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALK--GKLLHVYVEMNSEG---------------------VGRRVSQEFGVSG 338 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~--~~~~f~~id~~~~~---------------------~~~~~~~~~gi~~ 338 (405)
+++++ ++..+|. |......+.+++++++ +++.++.++.+... -...+.+.||+..
T Consensus 29 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (146)
T 1o8x_A 29 KLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVES 108 (146)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCS
T ss_pred CEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCC
Confidence 34444 5666776 9999999999999998 47888888877531 1346778899864
Q ss_pred CCCcEEEEEe-CCCc
Q 015527 339 NAPRVIAYSA-RDAK 352 (405)
Q Consensus 339 ~~~p~i~i~~-~~~~ 352 (405)
.|.+++++ .+|+
T Consensus 109 --~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 109 --IPTLIGVDADSGD 121 (146)
T ss_dssp --SSEEEEEETTTCC
T ss_pred --CCEEEEEECCCCe
Confidence 78888888 5444
No 448
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=94.13 E-value=0.55 Score=35.99 Aligned_cols=87 Identities=15% Similarity=0.136 Sum_probs=61.4
Q ss_pred CccEEE-EEecCC-C--cHHHHHHHHHHHHHh-cCc-EEEEEEEcCCcc--h--------------------hhhhhhhc
Q 015527 283 PRKQLW-LFAPAY-G--SDKVILTFEEVAKAL-KGK-LLHVYVEMNSEG--V--------------------GRRVSQEF 334 (405)
Q Consensus 283 ~~~~~i-~f~~~~-~--~~~~~~~~~~va~~~-~~~-~~f~~id~~~~~--~--------------------~~~~~~~~ 334 (405)
++++++ ++..|| . |......+.++++++ +++ +.++.++.+... + ...+.+.|
T Consensus 33 gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 112 (150)
T 3fw2_A 33 QKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQY 112 (150)
T ss_dssp TSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHc
Confidence 344444 556676 4 788999999999999 665 888888777541 0 13677788
Q ss_pred CCCCCCCcEEEEEeCCCcc-ccCCCCCCHHHHHHHHHHHhc
Q 015527 335 GVSGNAPRVIAYSARDAKK-YVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 335 gi~~~~~p~i~i~~~~~~~-y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
|+.. .|.+++++.+|+. +.. .+.+.+.+.|+.+++
T Consensus 113 ~v~~--~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 113 SIYK--IPANILLSSDGKILAKN---LRGEELKKKIENIVE 148 (150)
T ss_dssp TCCS--SSEEEEECTTSBEEEES---CCHHHHHHHHHHHHH
T ss_pred CCCc--cCeEEEECCCCEEEEcc---CCHHHHHHHHHHHHh
Confidence 8864 6888888875543 333 278889999888764
No 449
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=93.95 E-value=0.21 Score=38.10 Aligned_cols=68 Identities=9% Similarity=0.067 Sum_probs=49.1
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhc--CcEEEEEEEcCCcc---------------------hhhhhhhhcCCCC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALK--GKLLHVYVEMNSEG---------------------VGRRVSQEFGVSG 338 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~--~~~~f~~id~~~~~---------------------~~~~~~~~~gi~~ 338 (405)
+++++ ++..+|. |......+.+++++++ +++.++.++.+... -...+.+.||+..
T Consensus 29 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 108 (144)
T 1o73_A 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVES 108 (144)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCS
T ss_pred CEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCC
Confidence 34444 5566776 9999999999999998 46888888877531 1346778888864
Q ss_pred CCCcEEEEEe-CCCcc
Q 015527 339 NAPRVIAYSA-RDAKK 353 (405)
Q Consensus 339 ~~~p~i~i~~-~~~~~ 353 (405)
.|.+++++ .+|+.
T Consensus 109 --~Pt~~lid~~~G~i 122 (144)
T 1o73_A 109 --IPTLITINADTGAI 122 (144)
T ss_dssp --SSEEEEEETTTCCE
T ss_pred --CCEEEEEECCCCeE
Confidence 78888888 54443
No 450
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=93.84 E-value=0.099 Score=38.60 Aligned_cols=66 Identities=17% Similarity=0.330 Sum_probs=42.3
Q ss_pred hhhHHHHHcCCCcEEEEEec-----CCChhHhhhHHHHHHHHHHccCCc-EEEEEeCcccHhHHH----hCCCcccceEE
Q 015527 63 GKNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEA-DLVMVDAYLEKDLAK----EYNILAYPTLY 132 (405)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~a-----~~C~~C~~~~~~~~~~~~~~~~~v-~~~~v~~~~~~~~~~----~~~i~~~Pt~~ 132 (405)
.+.+++.+++++ ++| |.. |.|++|++....|... .+ .|..+|.++++++.+ .-|-+.+|.+
T Consensus 10 ~e~i~~~i~~~~-Vvv-F~Kgt~~~P~C~fc~~ak~lL~~~------gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqI- 80 (118)
T 2wul_A 10 AEQLDALVKKDK-VVV-FLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQV- 80 (118)
T ss_dssp HHHHHHHHHHSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCSCEEEETTSCHHHHHHHHHHHTCCSSCEE-
T ss_pred HHHHHHHHhcCC-EEE-EEcCCCCCCCCHHHHHHHHHHHHh------CCcCeEeecccCCHHHHHHHHHhccCCCCCeE-
Confidence 455677776654 444 432 5799999988766532 24 367788877766543 3467788987
Q ss_pred EEeCCe
Q 015527 133 LFVAGV 138 (405)
Q Consensus 133 ~~~~g~ 138 (405)
|-+|+
T Consensus 81 -FI~g~ 85 (118)
T 2wul_A 81 -YLNGE 85 (118)
T ss_dssp -EETTE
T ss_pred -eECCE
Confidence 44663
No 451
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=93.79 E-value=0.25 Score=38.61 Aligned_cols=90 Identities=9% Similarity=0.058 Sum_probs=61.3
Q ss_pred CccEEE-EEecCCC--cHHHHHHHHHHHHHhcC-----cEEEEEEEcCCcc-------------------------hhhh
Q 015527 283 PRKQLW-LFAPAYG--SDKVILTFEEVAKALKG-----KLLHVYVEMNSEG-------------------------VGRR 329 (405)
Q Consensus 283 ~~~~~i-~f~~~~~--~~~~~~~~~~va~~~~~-----~~~f~~id~~~~~-------------------------~~~~ 329 (405)
+++.++ ++..+|. |......++++..+++. ++.++.++.+... -...
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 344444 5556776 88999999999998863 6888888765410 0113
Q ss_pred hhhhcCCCCCCCc---------------EEEEEeCCC-ccccCCCCCCHHHHHHHHHHHhc
Q 015527 330 VSQEFGVSGNAPR---------------VIAYSARDA-KKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 330 ~~~~~gi~~~~~p---------------~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
+.+.||+.. .| .+++++.+| ..+.+.+..+.++|.+.|+.+++
T Consensus 103 ~~~~~~v~~--~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 103 VARAYRVYY--SPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHTTTCCE--EEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHhcCeEE--EecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 666777753 34 677777744 44556777889999999988764
No 452
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=93.64 E-value=0.11 Score=43.13 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=39.0
Q ss_pred cHhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 116 EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 116 ~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
+...++++||.++||++++.+|+....+.|..+.+.+.+.|.+.+.
T Consensus 165 ~~~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 165 GFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHHH
Confidence 3456788999999999999999766678899999999999987763
No 453
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=93.58 E-value=0.55 Score=37.77 Aligned_cols=93 Identities=14% Similarity=0.038 Sum_probs=58.9
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCC--------cchhhhhhh-hcCCC-------------
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNS--------EGVGRRVSQ-EFGVS------------- 337 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~--------~~~~~~~~~-~~gi~------------- 337 (405)
++++++ ++..||. |......+.++.++++++ +.++-+..+. ..-...+++ .++++
T Consensus 46 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (187)
T 3dwv_A 46 GSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGEN 125 (187)
T ss_dssp TSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC-
T ss_pred CCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCcc
Confidence 344444 5667777 999999999999999875 7787776541 110111111 22221
Q ss_pred ----------------C-CCCc---EEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 338 ----------------G-NAPR---VIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 338 ----------------~-~~~p---~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
. ...| ..++++.+|+ .+.+.+..+.+.|.+.|+.+++|
T Consensus 126 ~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 126 AHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred hhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 0 1234 6677777444 45677888999999999999876
No 454
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=93.52 E-value=0.6 Score=36.80 Aligned_cols=89 Identities=17% Similarity=0.066 Sum_probs=56.2
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcC--------Ccchhhhhh-h------------------
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMN--------SEGVGRRVS-Q------------------ 332 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~--------~~~~~~~~~-~------------------ 332 (405)
++++++ ++..||. |. ..+.+.+++.+++++ +.++.++.+ +..-...++ +
T Consensus 32 Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~~ 110 (171)
T 3cmi_A 32 GKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGGN 110 (171)
T ss_dssp TCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSSTT
T ss_pred CCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCcc
Confidence 344444 5667777 88 889999999999875 888888653 110011222 1
Q ss_pred -----------hcCCCCCCCc------EEEEEeCCC-ccccCCCCCCHHHHHHHHHHHhc
Q 015527 333 -----------EFGVSGNAPR------VIAYSARDA-KKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 333 -----------~~gi~~~~~p------~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
.+|+. ..| ..++++.+| ..+.+.|..+.+.|.+.|+.+++
T Consensus 111 ~~~~~~~~~~~~~~v~--~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 111 EDPVYKFLKSQKSGML--GLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp BCHHHHHHHHHSCCSS--SCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred chHHHHHHHhccCCcC--CCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 13332 246 667776644 45567788889999999998875
No 455
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=93.43 E-value=0.44 Score=37.34 Aligned_cols=94 Identities=20% Similarity=0.107 Sum_probs=60.5
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCc--------chhhhh-hhhcCC--------------
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSE--------GVGRRV-SQEFGV-------------- 336 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~--------~~~~~~-~~~~gi-------------- 336 (405)
++++++ ++..||. |......+.++.++++++ +.++.++.+.. .-...+ .+.+++
T Consensus 31 gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 110 (169)
T 2v1m_A 31 GHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGSD 110 (169)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSSTT
T ss_pred CCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCcc
Confidence 344444 5566777 889999999999999875 88888876520 001122 133322
Q ss_pred ---------------CC---CCCcEEEEEeCCC-ccccCCCCCCHHHHHHHHHHHhcCc
Q 015527 337 ---------------SG---NAPRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 337 ---------------~~---~~~p~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
.. ...|..++++.+| ..+.+.+..+.+.|.+.|+.++++|
T Consensus 111 ~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~k 169 (169)
T 2v1m_A 111 ADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLEKK 169 (169)
T ss_dssp SCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHHCC
T ss_pred ccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhccC
Confidence 11 0125666777644 4456778788899999999988764
No 456
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=93.37 E-value=0.74 Score=36.02 Aligned_cols=93 Identities=13% Similarity=0.047 Sum_probs=60.7
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCC--------cchhhhhhh-hcCCC-------------
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNS--------EGVGRRVSQ-EFGVS------------- 337 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~--------~~~~~~~~~-~~gi~------------- 337 (405)
++++++ ++..||. |......+.+++++++++ +.++.++.+. ..-...+++ .++++
T Consensus 32 gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 111 (170)
T 2p5q_A 32 GKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGEN 111 (170)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSSTT
T ss_pred CCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCCc
Confidence 344444 5556776 999999999999999876 8899887642 110122333 33221
Q ss_pred ----------------CCCCc---EEEEEeCCC-ccccCCCCCCHHHHHHHHHHHhcC
Q 015527 338 ----------------GNAPR---VIAYSARDA-KKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 338 ----------------~~~~p---~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
....| ..++++.+| ..+.+.+..+.+.+.+.|+.+++.
T Consensus 112 ~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (170)
T 2p5q_A 112 ASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLEI 169 (170)
T ss_dssp BCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTTC
T ss_pred hHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhhc
Confidence 02245 667777644 445577888889999999988753
No 457
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=93.35 E-value=0.16 Score=44.16 Aligned_cols=78 Identities=13% Similarity=-0.044 Sum_probs=52.8
Q ss_pred hHHHHHhccCCeEEEEEEcCCCCccHH---HHHHHhccCCcceEEEec-------CHHHHhhcCCCCCCCCCeEEEeecC
Q 015527 171 DEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQTT-------SADVAEFFHIHPKSKRPALIFLHLE 240 (405)
Q Consensus 171 ~~~~~~l~~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~~-------~~~l~~~~~~~~~~~~p~i~~~~~~ 240 (405)
..+.+.+.+.. ++.|+++||+++.+ .+.++++ ++.+.... +++++++++++. +|++.+ ++
T Consensus 190 ~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~---~l~~Vd~d~~d~~~~~~~la~~~gI~~---vPT~~i--~G 259 (291)
T 3kp9_A 190 VGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFD---QVPYVECSPNGPGTPQAQECTEAGITS---YPTWII--NG 259 (291)
T ss_dssp HHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGG---GSCEEESCSSCSSSCCCHHHHTTTCCS---TTEEEE--TT
T ss_pred HHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHH---HcCEEEEeecCchhhHHHHHHHcCCcc---cCeEEE--CC
Confidence 34555555544 57799999998555 4444443 22333222 578999999994 999654 32
Q ss_pred CCccccccCCCCHHHHHHHHhc
Q 015527 241 AGKATPFRHQFTRLAIANFVTH 262 (405)
Q Consensus 241 ~~~~~~y~g~~~~~~l~~fi~~ 262 (405)
+ .|.|..+.+++.+|+..
T Consensus 260 --~--~~~G~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 260 --R--TYTGVRSLEALAVASGY 277 (291)
T ss_dssp --E--EEESCCCHHHHHHHTCC
T ss_pred --E--EecCCCCHHHHHHHHCC
Confidence 2 38999999999999864
No 458
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=93.30 E-value=0.12 Score=37.02 Aligned_cols=78 Identities=6% Similarity=0.032 Sum_probs=51.1
Q ss_pred cEEE-EEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCCCH
Q 015527 285 KQLW-LFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELTL 362 (405)
Q Consensus 285 ~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~ 362 (405)
+.++ +..++|. |+...+.|.+++. ++.|..+|.++.. +.++...+| . ..|++++ ++... .-+.++.
T Consensus 17 ~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~-~~el~~~~g-~--~vP~l~~---~g~~~-~~~g~~~ 84 (100)
T 1wjk_A 17 PVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPE-NSTWYERYK-F--DIPVFHL---NGQFL-MMHRVNT 84 (100)
T ss_dssp CEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSST-THHHHHHSS-S--SCSEEEE---SSSEE-EESSCCH
T ss_pred CEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcc-hHHHHHHHC-C--CCCEEEE---CCEEE-EecCCCH
Confidence 4444 4455666 8887777766543 3899999998322 457888888 4 3787643 23332 2234788
Q ss_pred HHHHHHHHHHhc
Q 015527 363 SSIKSFGEEFLE 374 (405)
Q Consensus 363 ~~l~~Fi~~~~~ 374 (405)
+.|.++|+.++.
T Consensus 85 ~~l~~~l~~~~~ 96 (100)
T 1wjk_A 85 SKLEKQLRKLSG 96 (100)
T ss_dssp HHHHHHHHSSSC
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
No 459
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=93.18 E-value=0.38 Score=39.00 Aligned_cols=94 Identities=18% Similarity=0.211 Sum_probs=63.1
Q ss_pred ccEEEEE--ecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc----------------------hhhhhhhhcCCC
Q 015527 284 RKQLWLF--APAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG----------------------VGRRVSQEFGVS 337 (405)
Q Consensus 284 ~~~~i~f--~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~----------------------~~~~~~~~~gi~ 337 (405)
+++++.| ..+|. |......+.++++++++ .+.++.++.+... -...+.+.||+.
T Consensus 46 k~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 125 (195)
T 2bmx_A 46 KWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVL 125 (195)
T ss_dssp CEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCB
T ss_pred CcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCc
Confidence 4555655 45676 99999999999999986 4888888776410 023566778875
Q ss_pred CC---CCcEEEEEeCCCc-cccCCCC----CCHHHHHHHHHHHhcCce
Q 015527 338 GN---APRVIAYSARDAK-KYVLNGE----LTLSSIKSFGEEFLEDKL 377 (405)
Q Consensus 338 ~~---~~p~i~i~~~~~~-~y~~~~~----~~~~~l~~Fi~~~~~Gkl 377 (405)
.. ..|.+++++.+|+ .+.+.+. .+.++|.+.|+.+..|..
T Consensus 126 ~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~ 173 (195)
T 2bmx_A 126 NADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSDEL 173 (195)
T ss_dssp CTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC---
T ss_pred ccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhCCC
Confidence 11 3688888887444 3444332 378999999999998755
No 460
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=93.02 E-value=0.28 Score=37.33 Aligned_cols=82 Identities=10% Similarity=0.128 Sum_probs=54.4
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHH---HHHHhcC-cEEEEEEEcCCcchhh----------------------hhhhhcC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEE---VAKALKG-KLLHVYVEMNSEGVGR----------------------RVSQEFG 335 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~---va~~~~~-~~~f~~id~~~~~~~~----------------------~~~~~~g 335 (405)
++.++ ++..||. |......+.+ +.+++++ ++.++.++.++.. .. .+.+.|+
T Consensus 32 k~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 32 EYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEEL-DEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCH-HHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCH-HHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 34444 4556776 8999999999 9999864 5888888877541 10 1345666
Q ss_pred CCCCCCcEEEEEeCCCccccCCCCCCHHHHHHHHH
Q 015527 336 VSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGE 370 (405)
Q Consensus 336 i~~~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~ 370 (405)
+.. .|.+++++.+|+...- ..+.++|.+|++
T Consensus 111 v~~--~P~~~lid~~G~i~~~--~~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRA--IPTLYLLDKNKTVLLK--DATLQKVEQYLA 141 (142)
T ss_dssp CTT--CSEEEEECTTCBEEEE--EECHHHHHHHHH
T ss_pred CCc--CCeEEEECCCCcEEec--CCCHHHHHHHHh
Confidence 653 6888888875543321 135788888876
No 461
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=92.99 E-value=0.54 Score=36.93 Aligned_cols=92 Identities=12% Similarity=0.053 Sum_probs=62.1
Q ss_pred ccEEE-EEecCCC--cHHHHHHHHHHHHHhc-----CcEEEEEEEcCCc---c----------------------hhhhh
Q 015527 284 RKQLW-LFAPAYG--SDKVILTFEEVAKALK-----GKLLHVYVEMNSE---G----------------------VGRRV 330 (405)
Q Consensus 284 ~~~~i-~f~~~~~--~~~~~~~~~~va~~~~-----~~~~f~~id~~~~---~----------------------~~~~~ 330 (405)
+++++ ++..+|. |......+.++.+++. .++.++.++.+.. . -...+
T Consensus 27 k~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 106 (171)
T 2rli_A 27 QWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQA 106 (171)
T ss_dssp SEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHHH
T ss_pred CEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHHH
Confidence 34444 5556775 8999999999999985 4688888876621 0 01246
Q ss_pred hhhcCCCCC-------------CCcEEEEEeCCC-ccccCCCCCCHHHHHHHHHHHhcC
Q 015527 331 SQEFGVSGN-------------APRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 331 ~~~~gi~~~-------------~~p~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
.+.||+... ..|.+++++.+| ..+.+.+..+.+.|.+.|+.+++.
T Consensus 107 ~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 107 SHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp HHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 677887531 113677777744 445567788899999999987753
No 462
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=92.87 E-value=0.84 Score=36.74 Aligned_cols=91 Identities=15% Similarity=0.090 Sum_probs=60.0
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCC--------cchhhhhh-hhc----------------
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNS--------EGVGRRVS-QEF---------------- 334 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~--------~~~~~~~~-~~~---------------- 334 (405)
++++++ ++..||. |......+.++.++++++ +.++.++.+. ..-...++ +.+
T Consensus 48 Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~~ 127 (190)
T 2vup_A 48 GSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGEN 127 (190)
T ss_dssp TSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSSTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCccc
Confidence 344444 5566776 888999999999999875 8888887652 11012233 222
Q ss_pred -------------CCCCCCCc------EEEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 335 -------------GVSGNAPR------VIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 335 -------------gi~~~~~p------~i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
|+. ..| ..++++.+|+ .+.+.+..+.+.+.+.|+.+++.
T Consensus 128 ~~~~~~~l~~~~~~v~--~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 128 AHPLYEYMKKTKPGIL--KTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp BCHHHHHHHHHSCCGG--GCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHhhcCCcC--CCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 221 134 6677776444 45577888899999999988764
No 463
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=92.46 E-value=0.28 Score=36.27 Aligned_cols=55 Identities=9% Similarity=0.072 Sum_probs=35.7
Q ss_pred EEEEEecCCChhHh------hhHHHHHHHHHHccCCcEEEEEeCcccHh----HHHhC--------CCcccceEEEEeCC
Q 015527 76 VMVMFYANWCYWSK------KLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEY--------NILAYPTLYLFVAG 137 (405)
Q Consensus 76 ~~v~f~a~~C~~C~------~~~~~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~--------~i~~~Pt~~~~~~g 137 (405)
+++.|++++|+.|+ .....| +.. +|.|-.+|++.+++ +.++. |...+|.+ |.+|
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL----~~k--gV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQI--Fi~~ 72 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFL----EAN--KIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQI--FNES 72 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHH----HHT--TCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEE--EETT
T ss_pred CEEEEecCCCCCccchHHHHHHHHHH----HHC--CCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEE--EECC
Confidence 46678899999994 332222 221 68899999987644 44566 67778865 4555
Q ss_pred e
Q 015527 138 V 138 (405)
Q Consensus 138 ~ 138 (405)
.
T Consensus 73 ~ 73 (121)
T 1u6t_A 73 Q 73 (121)
T ss_dssp E
T ss_pred E
Confidence 3
No 464
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=92.28 E-value=0.12 Score=46.06 Aligned_cols=69 Identities=12% Similarity=0.217 Sum_probs=39.0
Q ss_pred hHHHHHcCCCcEEEEEecCCChhHhhhHH-HHHHHHHHccCCcEEEEEeC-ccc----HhHHHhCCCcccceEEEEeCCe
Q 015527 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAP-EFAAAAKMLKGEADLVMVDA-YLE----KDLAKEYNILAYPTLYLFVAGV 138 (405)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a~~C~~C~~~~~-~~~~~~~~~~~~v~~~~v~~-~~~----~~~~~~~~i~~~Pt~~~~~~g~ 138 (405)
.+++.+..++ ++.|..+||++|++... .+++..-.+. .+.++.+|- +++ ..+.+..|...+|+++ -+|+
T Consensus 253 ~V~~lI~~~~--VvVYsk~~CPyC~~Ak~~LL~~~gV~y~-eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVF--I~Gk 327 (362)
T 2jad_A 253 HVKDLIAENE--IFVASKTYCPYSHAALNTLFEKLKVPRS-KVLVLQLNDMKEGADIQAALYEINGQRTVPNIY--INGK 327 (362)
T ss_dssp HHHHHHHTCS--EEEEECTTCHHHHHHHHHHHTTTCCCTT-TEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEE--ETTE
T ss_pred HHHHHhccCC--EEEEEcCCCcchHHHHHHHHHHcCCCcc-eEEEEEeccccCCHHHHHHHHHHHCCCCcCEEE--ECCE
Confidence 3445555543 55588999999998765 3444322221 233333332 222 2344567899999874 4674
No 465
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=92.16 E-value=0.19 Score=40.43 Aligned_cols=41 Identities=10% Similarity=0.089 Sum_probs=33.0
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHHHc-cCCcEEEEEe
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML-KGEADLVMVD 112 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~-~~~v~~~~v~ 112 (405)
..+++++.|....|++|+++.+.+..+.+++ .++|.++--+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 4578899999999999999999988877765 5567776555
No 466
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=92.11 E-value=0.46 Score=36.08 Aligned_cols=84 Identities=8% Similarity=0.074 Sum_probs=55.8
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc-------------h----------hhhhhhhcCCC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG-------------V----------GRRVSQEFGVS 337 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~-------------~----------~~~~~~~~gi~ 337 (405)
++.++ ++..||. |......+.++.++|++ .+.++.++.+... | ...+.+.||+.
T Consensus 33 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 112 (143)
T 4fo5_A 33 RYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLR 112 (143)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGG
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCC
Confidence 44444 5566776 89999999999999985 4888888766421 0 12456777775
Q ss_pred CCCCcEEEEEeCCCccccCCCCCCHHHHHHHHHH
Q 015527 338 GNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEE 371 (405)
Q Consensus 338 ~~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~ 371 (405)
. .|..++++.+|+.... ..+.+++.+++++
T Consensus 113 ~--~P~~~lid~~G~i~~~--~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 113 K--GFKNFLINDEGVIIAA--NVTPEKLTEILKA 142 (143)
T ss_dssp G--CCCEEEECTTSBEEEE--SCCHHHHHHHHTC
T ss_pred C--CCcEEEECCCCEEEEc--cCCHHHHHHHHHh
Confidence 4 6777788765543321 2467888887764
No 467
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=91.43 E-value=0.61 Score=37.29 Aligned_cols=40 Identities=10% Similarity=-0.032 Sum_probs=30.5
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcC
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMN 322 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~ 322 (405)
++++++ ++..||. |......+.++++++.++ +.++.++.+
T Consensus 47 gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 47 GFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 344444 5566777 889999999999999875 888888764
No 468
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=91.31 E-value=0.16 Score=43.44 Aligned_cols=29 Identities=10% Similarity=0.170 Sum_probs=24.8
Q ss_pred CCcEEEEEecCCChhHhhhHHHHHHHHHH
Q 015527 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKM 101 (405)
Q Consensus 73 ~~~~~v~f~a~~C~~C~~~~~~~~~~~~~ 101 (405)
++.+++.|+-+.|++|+++.+.+.+..+.
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 46789999999999999999999865543
No 469
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=91.29 E-value=1.1 Score=35.60 Aligned_cols=90 Identities=12% Similarity=0.130 Sum_probs=57.4
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCC--------cchhhhhhhh-cCCC----------C---
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNS--------EGVGRRVSQE-FGVS----------G--- 338 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~--------~~~~~~~~~~-~gi~----------~--- 338 (405)
+++++ ++..||. |......+.+++++++++ +.++.++.+. ..-...+++. ++++ .
T Consensus 50 k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~~~ 129 (181)
T 2p31_A 50 SVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGA 129 (181)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTTS
T ss_pred CEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCccc
Confidence 44444 5567777 999999999999999876 8888887652 1102233333 4321 0
Q ss_pred --------CCCc-------EEEEEeCCC-ccccCCCCCCHHHHHHHHHHHh
Q 015527 339 --------NAPR-------VIAYSARDA-KKYVLNGELTLSSIKSFGEEFL 373 (405)
Q Consensus 339 --------~~~p-------~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~ 373 (405)
...| ..++++.+| ..+.+.+..+.+.|.+.|+.++
T Consensus 130 ~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 130 HPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp CHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred hhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 0125 566666644 4455677788888888888765
No 470
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=91.21 E-value=0.88 Score=33.60 Aligned_cols=43 Identities=16% Similarity=0.059 Sum_probs=29.6
Q ss_pred EEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCcccH-------hHHHhCCC
Q 015527 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNI 125 (405)
Q Consensus 77 ~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~~-------~~~~~~~i 125 (405)
+..|+.++|+.|++....+++. ++.+-.+|+.+++ ++.+++|+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH------GIDYTFHDYKKEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEEHHHHCCCHHHHHHHHHHSCG
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCcEEEEeeeCCCCCHHHHHHHHHHcCh
Confidence 5567889999999988777762 4566667765443 34556663
No 471
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=91.18 E-value=0.86 Score=35.47 Aligned_cols=88 Identities=11% Similarity=0.155 Sum_probs=55.8
Q ss_pred EEEEE--ecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcc------------------hhhhhhhhcCCCC--CCC
Q 015527 286 QLWLF--APAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEG------------------VGRRVSQEFGVSG--NAP 341 (405)
Q Consensus 286 ~~i~f--~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~------------------~~~~~~~~~gi~~--~~~ 341 (405)
+++.| ..+|. |......+.+++.+++++ +.++.++.++.. -...+.+.||+.. ...
T Consensus 32 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~ 111 (161)
T 3drn_A 32 IVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPA 111 (161)
T ss_dssp EEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCC
T ss_pred EEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCccc
Confidence 66655 45666 889999999999999865 888888765210 1336777888863 126
Q ss_pred cEEEEEeCCCc-cccCCCC----CCHHHHHHHHHHHh
Q 015527 342 RVIAYSARDAK-KYVLNGE----LTLSSIKSFGEEFL 373 (405)
Q Consensus 342 p~i~i~~~~~~-~y~~~~~----~~~~~l~~Fi~~~~ 373 (405)
|..++++.+|+ .+.+.+. -+.+++.+.++.+.
T Consensus 112 P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l~ 148 (161)
T 3drn_A 112 RITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIK 148 (161)
T ss_dssp CEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHHH
T ss_pred ceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHhh
Confidence 88888887444 3444442 22344555555443
No 472
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=90.79 E-value=0.26 Score=40.15 Aligned_cols=105 Identities=12% Similarity=0.119 Sum_probs=63.9
Q ss_pred CccEEEEEe--cCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc-------------------h------hhhhhhh
Q 015527 283 PRKQLWLFA--PAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG-------------------V------GRRVSQE 333 (405)
Q Consensus 283 ~~~~~i~f~--~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~-------------------~------~~~~~~~ 333 (405)
++++++.|. .+|. |......+.++++++++ .+.++.++.+... | ...+.+.
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRD 112 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHH
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHH
Confidence 345566555 5666 88889999999999875 4888888766410 0 2356677
Q ss_pred cCCCCC---CCcEEEEEeCCCc-cccCCCC----CCHHHHHHHHHHHhcCceeeecccCchhhh
Q 015527 334 FGVSGN---APRVIAYSARDAK-KYVLNGE----LTLSSIKSFGEEFLEDKLLNQSDQISETIL 389 (405)
Q Consensus 334 ~gi~~~---~~p~i~i~~~~~~-~y~~~~~----~~~~~l~~Fi~~~~~Gkl~~kse~iPe~~~ 389 (405)
||+... ..|..++++.+|+ .+.+.+. .+.++|.+.|+.+... ..+.+..|.+|.
T Consensus 113 ~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~--~~~~~~~p~~w~ 174 (198)
T 1zof_A 113 YDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHF--EEHGEVCPAGWR 174 (198)
T ss_dssp TTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHHHH--HSSCCCCC----
T ss_pred hCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHHh--hccCCccCCcCc
Confidence 887511 3688888877444 3334332 3678898888887621 123445555543
No 473
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=90.78 E-value=1.9 Score=34.18 Aligned_cols=93 Identities=12% Similarity=0.085 Sum_probs=58.1
Q ss_pred CccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCC--------cchhhhhhhh-cCCCC------------
Q 015527 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNS--------EGVGRRVSQE-FGVSG------------ 338 (405)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~--------~~~~~~~~~~-~gi~~------------ 338 (405)
++++++ ++..||. |......+.+++++++++ +.++-+..+. ..-...+++. +|++-
T Consensus 38 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 117 (180)
T 3kij_A 38 GKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSE 117 (180)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTT
T ss_pred CCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCcc
Confidence 344444 5567777 999999999999999876 8888886542 1112344455 55431
Q ss_pred C------------CCcE----EEEEeCCCc-cccCCCCCCHHHHHHHHHHHhcC
Q 015527 339 N------------APRV----IAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 375 (405)
Q Consensus 339 ~------------~~p~----i~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~G 375 (405)
. ..|. .++++.+|+ .+.+.+..+.+.+.+.|+.+++.
T Consensus 118 ~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 171 (180)
T 3kij_A 118 GEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQ 171 (180)
T ss_dssp CCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHHH
T ss_pred ccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Confidence 0 0233 556666444 45677777777777777766644
No 474
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=90.56 E-value=0.15 Score=34.50 Aligned_cols=57 Identities=7% Similarity=0.018 Sum_probs=39.7
Q ss_pred EEEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcchhhhhhhhcCCCCCCCcEEEE
Q 015527 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAY 346 (405)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~~~~~~~~~gi~~~~~p~i~i 346 (405)
+.+++.++|. |+...+.+++++.++..++.+..+|.+. . ..++...+|+.. .|.+++
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~-~-~~~~~~~~gv~~--vPt~~i 61 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDK-A-RIAEAEKAGVKS--VPALVI 61 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCS-S-THHHHHHHTCCE--EEEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCh-h-hHHHHHHcCCCc--CCEEEE
Confidence 4566777877 8999999998887766556666555431 1 336678889864 788877
No 475
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=90.30 E-value=0.27 Score=35.90 Aligned_cols=84 Identities=8% Similarity=0.095 Sum_probs=50.9
Q ss_pred HHHHHhccCCeEEEEEEcCCCCccHHHHHHHhccCCcceEEEecC--------HHHHhhcCCCCCCCCCeEEEeecCCCc
Q 015527 172 EAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTS--------ADVAEFFHIHPKSKRPALIFLHLEAGK 243 (405)
Q Consensus 172 ~~~~~l~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~--------~~l~~~~~~~~~~~~p~i~~~~~~~~~ 243 (405)
.++..++.. .+++ |+.+||.++......+.+....+.+..+.. ..+.+.+++. +.|++ |.++ ..
T Consensus 12 ~~~~~~~~~-~vv~-f~a~~C~~C~~~~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~---~~Pt~--~~~g-~~ 83 (116)
T 2e7p_A 12 KAKELASSA-PVVV-FSKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRG---TVPNV--FIGG-KQ 83 (116)
T ss_dssp HHHHHHTSS-SEEE-EECTTCHHHHHHHHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSCC---SSCEE--EETT-EE
T ss_pred HHHHHHcCC-CEEE-EECCCChhHHHHHHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhCCC---CcCEE--EECC-EE
Confidence 344445443 4444 999999998776666555555566655422 3488899997 48998 3332 22
Q ss_pred cccccCCC---CHHHHHHHHhcc
Q 015527 244 ATPFRHQF---TRLAIANFVTHT 263 (405)
Q Consensus 244 ~~~y~g~~---~~~~l~~fi~~~ 263 (405)
...+.|.. +.+.|.+|+...
T Consensus 84 v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 84 IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp EECHHHHHHHHHTTCHHHHHHHT
T ss_pred ECChHHHHHHHhCChHHHHHHHc
Confidence 22333332 456788888754
No 476
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=89.99 E-value=0.79 Score=36.74 Aligned_cols=91 Identities=13% Similarity=0.013 Sum_probs=61.8
Q ss_pred ccEEEEE--ecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc----------------------hhhhhhhhcCCC
Q 015527 284 RKQLWLF--APAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG----------------------VGRRVSQEFGVS 337 (405)
Q Consensus 284 ~~~~i~f--~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~----------------------~~~~~~~~~gi~ 337 (405)
++.++.| ..+|. |......+.+++.++++ .+.++.++.+... -...+.+.||+.
T Consensus 32 k~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 111 (187)
T 1we0_A 32 KWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVL 111 (187)
T ss_dssp SEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCE
T ss_pred CCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCCC
Confidence 4556655 46666 88999999999999875 4888888776410 023566778875
Q ss_pred CC----CCcEEEEEeCCCc-cccCCCC----CCHHHHHHHHHHHhc
Q 015527 338 GN----APRVIAYSARDAK-KYVLNGE----LTLSSIKSFGEEFLE 374 (405)
Q Consensus 338 ~~----~~p~i~i~~~~~~-~y~~~~~----~~~~~l~~Fi~~~~~ 374 (405)
.. ..|.+++++.+|+ .+.+.+. .+.++|.+.|+.+..
T Consensus 112 ~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 112 NEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp ETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred cCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 21 3688888887544 3434332 367889999988775
No 477
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=89.80 E-value=0.66 Score=38.07 Aligned_cols=42 Identities=14% Similarity=0.171 Sum_probs=31.9
Q ss_pred CCCcEEEEEecCCChhHhhhHHHHHHHHH-Hc--cCCcEEEEEeC
Q 015527 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAK-ML--KGEADLVMVDA 113 (405)
Q Consensus 72 ~~~~~~v~f~a~~C~~C~~~~~~~~~~~~-~~--~~~v~~~~v~~ 113 (405)
..++++|.|....|++|+++.+.+....+ +| .++|.++-.+.
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 35788999999999999999988755444 77 44677765554
No 478
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=88.93 E-value=0.07 Score=41.73 Aligned_cols=88 Identities=10% Similarity=0.009 Sum_probs=50.5
Q ss_pred EEEecCCC-cHHHHHHHHH-HHHHhc--CcEEEEEEEcCCcc-hhhhhh------------------hhcCCCCCCCcEE
Q 015527 288 WLFAPAYG-SDKVILTFEE-VAKALK--GKLLHVYVEMNSEG-VGRRVS------------------QEFGVSGNAPRVI 344 (405)
Q Consensus 288 i~f~~~~~-~~~~~~~~~~-va~~~~--~~~~f~~id~~~~~-~~~~~~------------------~~~gi~~~~~p~i 344 (405)
.++..||. |....+.+.+ +..++. .++.++.++.++.. ....+. +.||+.....|.+
T Consensus 39 ~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~P~~ 118 (159)
T 2ls5_A 39 QFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALRDAGITRN 118 (159)
Confidence 34555665 7777777777 777765 35667776655431 011222 2333222236777
Q ss_pred EEEeCCCc-cccCCCCCCHHHHHHHHHHHhcCc
Q 015527 345 AYSARDAK-KYVLNGELTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 345 ~i~~~~~~-~y~~~~~~~~~~l~~Fi~~~~~Gk 376 (405)
++++.+|+ .+.+.+ .+.+++.++++.+.++.
T Consensus 119 ~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~~~ 150 (159)
T 2ls5_A 119 VLIDREGKIVKLTRL-YNEEEFASLVQQINEML 150 (159)
Confidence 77766443 344444 56677888888776653
No 479
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=88.79 E-value=1.4 Score=34.50 Aligned_cols=93 Identities=13% Similarity=0.045 Sum_probs=56.4
Q ss_pred ccEEE-EEecCCC--cHHHHHHHHHHHHHhcC---cEEEEEEEcCC---c-chhhhhhhhcCCCC---------------
Q 015527 284 RKQLW-LFAPAYG--SDKVILTFEEVAKALKG---KLLHVYVEMNS---E-GVGRRVSQEFGVSG--------------- 338 (405)
Q Consensus 284 ~~~~i-~f~~~~~--~~~~~~~~~~va~~~~~---~~~f~~id~~~---~-~~~~~~~~~~gi~~--------------- 338 (405)
+++++ ++..+|. |......+.++.+++.. ++.++.++.+. . .-...+++.++++-
T Consensus 34 k~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (174)
T 1xzo_A 34 EVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIE 113 (174)
T ss_dssp CCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHHHH
T ss_pred CEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHHHH
Confidence 44444 5667774 88888889999888864 38888887652 1 10112223322211
Q ss_pred --------------------CCCcEEEEEeCCCc-cccCCCC--CCHHHHHHHHHHHhcCc
Q 015527 339 --------------------NAPRVIAYSARDAK-KYVLNGE--LTLSSIKSFGEEFLEDK 376 (405)
Q Consensus 339 --------------------~~~p~i~i~~~~~~-~y~~~~~--~~~~~l~~Fi~~~~~Gk 376 (405)
...|..++++.+|+ .+.+.+. .+.++|.+.|+.+++.|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~k 174 (174)
T 1xzo_A 114 EFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTLK 174 (174)
T ss_dssp HHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTCCC
T ss_pred HHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHhcC
Confidence 12567777777444 3445553 35789999999888754
No 480
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=88.65 E-value=1.5 Score=34.97 Aligned_cols=39 Identities=10% Similarity=-0.049 Sum_probs=30.0
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMN 322 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~ 322 (405)
+++++ ++..||. |......+.+++++++++ +.++.++.+
T Consensus 50 k~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 50 FVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 44444 5566777 888999999999999865 888888764
No 481
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=88.54 E-value=0.18 Score=41.26 Aligned_cols=65 Identities=12% Similarity=0.207 Sum_probs=41.0
Q ss_pred hhhhhcCCCCCCCcEEEEEeCCCccccCC-CCCCHHHHHHHHHHHhcCce-eeecccCchhh-hcCccCccccee
Q 015527 329 RVSQEFGVSGNAPRVIAYSARDAKKYVLN-GELTLSSIKSFGEEFLEDKL-LNQSDQISETI-LKLPSQSRASYQ 400 (405)
Q Consensus 329 ~~~~~~gi~~~~~p~i~i~~~~~~~y~~~-~~~~~~~l~~Fi~~~~~Gkl-~~kse~iPe~~-~~~~~~~~~~~~ 400 (405)
+..+.+|++. .|.+++ ++ +|.+. +.++.+++..|++++++ -+ +++|+++|..- .-.+|++|..+.
T Consensus 41 ~~a~~~gi~g--vP~fvi---ng-k~~~~~~~~~~~~~~~f~~~~~~-l~~~L~s~~~p~~~~~~~~g~~y~~l~ 108 (197)
T 1un2_A 41 KAAADVQLRG--VPAMFV---NG-KYQLNPQGMDTSNMDVFVQQYAD-TVKYLSEKKGGGTGAQYEDGKQYTTLE 108 (197)
T ss_dssp HHHHHTTCCS--SSEEEE---TT-TEEECGGGSCCSSHHHHHHHHHH-HHHHHTC---------CCBTTTEEECS
T ss_pred HHHHHcCCCc--CCEEEE---cc-eEecCccccccccHHHHHHHHHH-HHHHHHhCcccccccccCCCCCceEcc
Confidence 4567889975 788876 23 45444 35677889999999998 44 99999999762 235678887654
No 482
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=88.17 E-value=2.8 Score=34.26 Aligned_cols=39 Identities=18% Similarity=0.149 Sum_probs=29.9
Q ss_pred ccEEE-EEecCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcC
Q 015527 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALKGK-LLHVYVEMN 322 (405)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~ 322 (405)
+++++ +++.||. |....+.|++++++++++ +.++-++.+
T Consensus 48 k~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 48 KVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 34444 5667777 888889999999999875 888888764
No 483
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=88.11 E-value=0.71 Score=36.21 Aligned_cols=88 Identities=13% Similarity=0.177 Sum_probs=57.8
Q ss_pred ccEEE-EEecCCC--cHHHHHHHHHHHHHhcC----cEEEEEEEcCCc----chh---------------------hhhh
Q 015527 284 RKQLW-LFAPAYG--SDKVILTFEEVAKALKG----KLLHVYVEMNSE----GVG---------------------RRVS 331 (405)
Q Consensus 284 ~~~~i-~f~~~~~--~~~~~~~~~~va~~~~~----~~~f~~id~~~~----~~~---------------------~~~~ 331 (405)
+++++ ++..+|. |......+.++++++++ ++.++.++.+.. .-. ..+.
T Consensus 36 k~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~ 115 (172)
T 2k6v_A 36 KVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVREAA 115 (172)
T ss_dssp SEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHHHH
T ss_pred CEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHHHH
Confidence 44444 5567776 89999999999999984 689999986631 000 2455
Q ss_pred hhcCCCC-------------CCCcEEEEEeCCCcc-ccCCCCC--CHHHHHHHHHHH
Q 015527 332 QEFGVSG-------------NAPRVIAYSARDAKK-YVLNGEL--TLSSIKSFGEEF 372 (405)
Q Consensus 332 ~~~gi~~-------------~~~p~i~i~~~~~~~-y~~~~~~--~~~~l~~Fi~~~ 372 (405)
+.||+.. ...|.+++++ +|+. +.+.+.. +.+.|.+.|+.+
T Consensus 116 ~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 116 QTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 5566421 1247777777 6654 4456655 888888888764
No 484
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=87.69 E-value=0.56 Score=45.63 Aligned_cols=67 Identities=19% Similarity=0.257 Sum_probs=43.5
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCccc---Hh----HHHhCCCcccceEEEEeC
Q 015527 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---KD----LAKEYNILAYPTLYLFVA 136 (405)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~---~~----~~~~~~i~~~Pt~~~~~~ 136 (405)
+.+++.+...+ ++.|..+||++|++....+.+. .+.+-.+|++.. ++ +.+..+...+|.+ |-+
T Consensus 9 ~~v~~~i~~~~--v~vy~~~~Cp~C~~~k~~L~~~------~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v--~i~ 78 (598)
T 2x8g_A 9 QWLRKTVDSAA--VILFSKTTCPYCKKVKDVLAEA------KIKHATIELDQLSNGSAIQKCLASFSKIETVPQM--FVR 78 (598)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE--EET
T ss_pred HHHHHHhccCC--EEEEECCCChhHHHHHHHHHHC------CCCcEEEEcccCcchHHHHHHHHHHhCCceeCEE--EEC
Confidence 45666665443 5668999999999998887754 234445565432 33 3334678889987 456
Q ss_pred Ceee
Q 015527 137 GVRQ 140 (405)
Q Consensus 137 g~~~ 140 (405)
|+.+
T Consensus 79 g~~i 82 (598)
T 2x8g_A 79 GKFI 82 (598)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 7444
No 485
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=87.59 E-value=1.4 Score=36.54 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=61.6
Q ss_pred ccEEEEEe--cCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc-------------------h------hhhhhhhc
Q 015527 284 RKQLWLFA--PAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG-------------------V------GRRVSQEF 334 (405)
Q Consensus 284 ~~~~i~f~--~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~-------------------~------~~~~~~~~ 334 (405)
++.++.|. .+|. |......|.+++.++++ .+.++-++.+... | ...+.+.|
T Consensus 57 k~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~y 136 (220)
T 1zye_A 57 KYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDY 136 (220)
T ss_dssp SEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHT
T ss_pred CeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHh
Confidence 45666555 5666 89999999999999964 5888888765310 0 23566777
Q ss_pred CCCCC----CCcEEEEEeCCCc-cccCC----CCCCHHHHHHHHHHHhcCceeeecccCchhhh
Q 015527 335 GVSGN----APRVIAYSARDAK-KYVLN----GELTLSSIKSFGEEFLEDKLLNQSDQISETIL 389 (405)
Q Consensus 335 gi~~~----~~p~i~i~~~~~~-~y~~~----~~~~~~~l~~Fi~~~~~Gkl~~kse~iPe~~~ 389 (405)
|+... ..|.+++++.+|+ .+... ...+.+++.+.|+.+.... ..++.-|.+|.
T Consensus 137 gv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~~--~~~~~cp~~W~ 198 (220)
T 1zye_A 137 GVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVE--AHGEVSPANWT 198 (220)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHTT--C----------
T ss_pred CCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhhhc--ccCCccCCCCC
Confidence 77511 3688888887444 33322 2356788999999887542 22344455543
No 486
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=87.32 E-value=1.9 Score=33.24 Aligned_cols=88 Identities=10% Similarity=0.066 Sum_probs=55.0
Q ss_pred cEEEEE--ecCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc------------------h--hhhhhhhcCCCCC-
Q 015527 285 KQLWLF--APAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG------------------V--GRRVSQEFGVSGN- 339 (405)
Q Consensus 285 ~~~i~f--~~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~------------------~--~~~~~~~~gi~~~- 339 (405)
+.++.| ..+|. |......+.+++.++++ .+.++.++.++.. . ...+.+.||+...
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETT
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcccc
Confidence 555555 56776 89999999999999975 4888888765310 0 2356778887511
Q ss_pred -CCc--EEEEEeCCCc-cccCCCCC----CHHHHHHHHHHH
Q 015527 340 -APR--VIAYSARDAK-KYVLNGEL----TLSSIKSFGEEF 372 (405)
Q Consensus 340 -~~p--~i~i~~~~~~-~y~~~~~~----~~~~l~~Fi~~~ 372 (405)
..| ..++.+.+|+ .+.+.+.. ..+++.+.++.+
T Consensus 118 ~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 118 AGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp TTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHT
T ss_pred CCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 246 6777776444 34443432 445566655543
No 487
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=86.70 E-value=1.1 Score=37.09 Aligned_cols=105 Identities=9% Similarity=0.091 Sum_probs=62.5
Q ss_pred CccEEEEEe--cCCC-cHHHHHHHHHHHHHhcCc-EEEEEEEcCCcc----h---------------------hhhhhhh
Q 015527 283 PRKQLWLFA--PAYG-SDKVILTFEEVAKALKGK-LLHVYVEMNSEG----V---------------------GRRVSQE 333 (405)
Q Consensus 283 ~~~~~i~f~--~~~~-~~~~~~~~~~va~~~~~~-~~f~~id~~~~~----~---------------------~~~~~~~ 333 (405)
++++++.|. .+|. |......+.++.++|+++ +.++.|..+... | ...+.+.
T Consensus 69 Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 148 (222)
T 3ztl_A 69 GKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKA 148 (222)
T ss_dssp TSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHHH
Confidence 346666555 5676 899999999999999864 888888776421 0 1245566
Q ss_pred cCCCCC----CCcEEEEEeCCCc-cccCCCC----CCHHHHHHHHHHHhcCce-eeecccCchhhhc
Q 015527 334 FGVSGN----APRVIAYSARDAK-KYVLNGE----LTLSSIKSFGEEFLEDKL-LNQSDQISETILK 390 (405)
Q Consensus 334 ~gi~~~----~~p~i~i~~~~~~-~y~~~~~----~~~~~l~~Fi~~~~~Gkl-~~kse~iPe~~~~ 390 (405)
||+... ..|..++++.+|+ .+.+.+. -..+++.+.++. .+. ..++..-|-+|+.
T Consensus 149 ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~---l~~~~~~~~~c~~~w~~ 212 (222)
T 3ztl_A 149 YGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA---FQFVEKHGEVCPVNWKR 212 (222)
T ss_dssp TTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH---HHHHHHHSCBBCTTCCT
T ss_pred cCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH---hhcccccCccCCcCcCC
Confidence 777521 3578888887544 3443332 234444444443 333 3445556666553
No 488
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=86.71 E-value=0.13 Score=39.20 Aligned_cols=64 Identities=11% Similarity=0.251 Sum_probs=40.5
Q ss_pred EEEEecCCC-cHHHHHHHHHHHHHhc---CcEEEEEEEcCCcc--h--------------------hhhhhhhcCCCCCC
Q 015527 287 LWLFAPAYG-SDKVILTFEEVAKALK---GKLLHVYVEMNSEG--V--------------------GRRVSQEFGVSGNA 340 (405)
Q Consensus 287 ~i~f~~~~~-~~~~~~~~~~va~~~~---~~~~f~~id~~~~~--~--------------------~~~~~~~~gi~~~~ 340 (405)
+.++..+|. |....+.+.+++++++ .++.++.++.++.. + ...+.+.||+..
T Consensus 31 l~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 108 (143)
T 2lus_A 31 FYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGITG-- 108 (143)
Confidence 345566776 8888888999988883 35667776655321 0 124566677643
Q ss_pred CcEEEEEeCCCc
Q 015527 341 PRVIAYSARDAK 352 (405)
Q Consensus 341 ~p~i~i~~~~~~ 352 (405)
.|.+++++.+|+
T Consensus 109 ~P~~~lid~~G~ 120 (143)
T 2lus_A 109 IPALVIVKKDGT 120 (143)
Confidence 577777765443
No 489
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=86.52 E-value=1.2 Score=36.18 Aligned_cols=91 Identities=13% Similarity=0.079 Sum_probs=60.2
Q ss_pred ccEEEEEe--cCCC-cHHHHHHHHHHHHHhcC-cEEEEEEEcCCcc-------------------------hhhhhhhhc
Q 015527 284 RKQLWLFA--PAYG-SDKVILTFEEVAKALKG-KLLHVYVEMNSEG-------------------------VGRRVSQEF 334 (405)
Q Consensus 284 ~~~~i~f~--~~~~-~~~~~~~~~~va~~~~~-~~~f~~id~~~~~-------------------------~~~~~~~~~ 334 (405)
++.++.|. .+|. |......+.++++++++ .+.++-++.+... -...+.+.|
T Consensus 37 k~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~y 116 (202)
T 1uul_A 37 KWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSY 116 (202)
T ss_dssp SEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHH
T ss_pred CeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHc
Confidence 45666555 4666 88888999999999975 4888888776410 023566777
Q ss_pred CCCCC----CCcEEEEEeCCCc-cccCCC----CCCHHHHHHHHHHHhc
Q 015527 335 GVSGN----APRVIAYSARDAK-KYVLNG----ELTLSSIKSFGEEFLE 374 (405)
Q Consensus 335 gi~~~----~~p~i~i~~~~~~-~y~~~~----~~~~~~l~~Fi~~~~~ 374 (405)
|+... ..|..++++.+|+ .+...+ ..+.+++.+.|+.+..
T Consensus 117 gv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~~ 165 (202)
T 1uul_A 117 GVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQF 165 (202)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhhh
Confidence 77511 3688888877444 333322 3467888888888763
No 490
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=86.39 E-value=4.9 Score=31.13 Aligned_cols=90 Identities=14% Similarity=0.130 Sum_probs=55.9
Q ss_pred CccEEEEEe-cC-CC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcch--------------------hhhhhhhcCCCCC
Q 015527 283 PRKQLWLFA-PA-YG-SDKVILTFEEVAKALKGKLLHVYVEMNSEGV--------------------GRRVSQEFGVSGN 339 (405)
Q Consensus 283 ~~~~~i~f~-~~-~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~~--------------------~~~~~~~~gi~~~ 339 (405)
+++.++.|. .+ |. |......+.++++++ .++.++.++.++..- ...+.+.||+...
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~ 122 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIK 122 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBT
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccc
Confidence 345555544 55 55 888899999999999 668888887664210 2245556666432
Q ss_pred C----CcEEEEEeCCCc-cccCC-----CCCCHHHHHHHHHHHh
Q 015527 340 A----PRVIAYSARDAK-KYVLN-----GELTLSSIKSFGEEFL 373 (405)
Q Consensus 340 ~----~p~i~i~~~~~~-~y~~~-----~~~~~~~l~~Fi~~~~ 373 (405)
. .|..++.+.+|+ .+.+. ...+.+++.+.++.++
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred cCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 1 377777777443 34332 2345577877777665
No 491
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=85.99 E-value=1.7 Score=29.28 Aligned_cols=78 Identities=15% Similarity=0.166 Sum_probs=50.4
Q ss_pred EEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCcc-hhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCCCHHH
Q 015527 287 LWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSEG-VGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSS 364 (405)
Q Consensus 287 ~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~~-~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~ 364 (405)
+++..++|. |+...+.|++++.++++ +.|..+|.+... ...++.+.+|..-...|.+++ +|.... + .++
T Consensus 4 ~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~---~g~~i~--~---~~~ 74 (85)
T 1ego_A 4 VIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV---DQQHIG--G---YTD 74 (85)
T ss_dssp EEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE---TTEEEE--S---SHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCceeCeEEE---CCEEEE--C---HHH
Confidence 344456777 99999999999998775 889999876431 013677778822224788754 333321 1 367
Q ss_pred HHHHHHHHh
Q 015527 365 IKSFGEEFL 373 (405)
Q Consensus 365 l~~Fi~~~~ 373 (405)
|.+++++-+
T Consensus 75 l~~~~~~~~ 83 (85)
T 1ego_A 75 FAAWVKENL 83 (85)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 888877643
No 492
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=85.91 E-value=2.5 Score=34.24 Aligned_cols=109 Identities=6% Similarity=0.001 Sum_probs=58.2
Q ss_pred CccEEE-EEecCCC--cHHHHHHHHHHHHHhc----CcEEEEEEEcCCc----------------ch---------hhhh
Q 015527 283 PRKQLW-LFAPAYG--SDKVILTFEEVAKALK----GKLLHVYVEMNSE----------------GV---------GRRV 330 (405)
Q Consensus 283 ~~~~~i-~f~~~~~--~~~~~~~~~~va~~~~----~~~~f~~id~~~~----------------~~---------~~~~ 330 (405)
++++++ ++..+|. |......|.++..++. +++.++.++.+.. .| ...+
T Consensus 41 Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~ 120 (200)
T 2b7k_A 41 GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNA 120 (200)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHHH
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHHH
Confidence 344444 5556776 8888888888766654 4677777766520 00 1245
Q ss_pred hhhcCCCCCCC--------------cEEEEEeCCC-ccccCCCCCCHHHHHHHHHHHhcCceeeec-ccCchhhhcC
Q 015527 331 SQEFGVSGNAP--------------RVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLEDKLLNQS-DQISETILKL 391 (405)
Q Consensus 331 ~~~~gi~~~~~--------------p~i~i~~~~~-~~y~~~~~~~~~~l~~Fi~~~~~Gkl~~ks-e~iPe~~~~~ 391 (405)
.+.||+....+ |..++++.+| ..+.+.+..+.+.+.+.|...++.-+...+ ++=+|.|+..
T Consensus 121 ~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~ 197 (200)
T 2b7k_A 121 CKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSYVPAEQRAKQKEAWYSF 197 (200)
T ss_dssp HHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHHCCCC-------------
T ss_pred HHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhcchhHHHHHHH
Confidence 67777752112 3567777744 445567777888888888888765332212 2236667654
No 493
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=85.50 E-value=0.89 Score=34.23 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=25.6
Q ss_pred EEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeCccc
Q 015527 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE 116 (405)
Q Consensus 77 ~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~~~~ 116 (405)
+..|+.++|+.|++....+++. ++.+-.+|+.++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEccCC
Confidence 5568899999999988777652 466667777655
No 494
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=85.07 E-value=2.5 Score=34.76 Aligned_cols=104 Identities=11% Similarity=0.071 Sum_probs=63.6
Q ss_pred ccEEEEEe--cCCC-cHHHHHHHHHHHHHhc-CcEEEEEEEcCCcc----h---------------------hhhhhhhc
Q 015527 284 RKQLWLFA--PAYG-SDKVILTFEEVAKALK-GKLLHVYVEMNSEG----V---------------------GRRVSQEF 334 (405)
Q Consensus 284 ~~~~i~f~--~~~~-~~~~~~~~~~va~~~~-~~~~f~~id~~~~~----~---------------------~~~~~~~~ 334 (405)
+++++.|. .+|. |......|.+++++++ ..+.++-++.++.. | ...+.+.|
T Consensus 53 k~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~y 132 (213)
T 2i81_A 53 KYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDY 132 (213)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHT
T ss_pred CeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHHh
Confidence 45566554 5666 8888899999999986 35777777665410 0 23456677
Q ss_pred CCCC---CCCcEEEEEeCCCc-cccCCC----CCCHHHHHHHHHHHhcCceeeecccCchhhh
Q 015527 335 GVSG---NAPRVIAYSARDAK-KYVLNG----ELTLSSIKSFGEEFLEDKLLNQSDQISETIL 389 (405)
Q Consensus 335 gi~~---~~~p~i~i~~~~~~-~y~~~~----~~~~~~l~~Fi~~~~~Gkl~~kse~iPe~~~ 389 (405)
|+.. ...|..++++.+|+ .+.+.+ ..+.+++.+.|+.+... ...++.-|-+|.
T Consensus 133 gv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~~~--~~~~~~cp~~w~ 193 (213)
T 2i81_A 133 NVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQHH--EKYGDVCPANWQ 193 (213)
T ss_dssp TCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHH--HHHCCBCCTTCC
T ss_pred CCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhh--hhcCCCcCCCCC
Confidence 7651 02577788877443 344322 34578888888877632 123445555554
No 495
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=83.24 E-value=0.94 Score=36.31 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=29.9
Q ss_pred hHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHH
Q 015527 118 DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (405)
Q Consensus 118 ~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (405)
..++++||.++||+++ ||+......|..+.+.+.++|
T Consensus 145 ~~a~~~GV~gtPtf~i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE--TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE--CCEEccCCCCCCCHHHHHHHh
Confidence 4567889999999876 786555678889999998876
No 496
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=82.42 E-value=1.2 Score=32.05 Aligned_cols=36 Identities=25% Similarity=0.514 Sum_probs=28.7
Q ss_pred CcEEEEEecCCChhHhhhHHHHHHHHHHccCCcEEEEEeC
Q 015527 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (405)
Q Consensus 74 ~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~v~~ 113 (405)
+.++++|-.|.|+-|.-....+.++ .++..+.+||+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~l----edeY~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEEL----KSEYDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTT----TTTEEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHh----hccccEEEEEe
Confidence 5689999999999999888777444 44556888886
No 497
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=81.00 E-value=0.83 Score=36.80 Aligned_cols=42 Identities=17% Similarity=0.137 Sum_probs=31.5
Q ss_pred HhHHHhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhh
Q 015527 117 KDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (405)
Q Consensus 117 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (405)
...++++||.++||+++ +|+......|..+.+.+.+.|.+.+
T Consensus 152 ~~~a~~~gv~gtPt~~i--ng~~~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 152 KASYDVAKIQGVPAYVV--NGKYLIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGHHHHHHHHCSSEEEE--TTTEEECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEE--CCEEEeccCCCCCHHHHHHHHHHHH
Confidence 44677889999999655 7754444458789999999888765
No 498
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=80.95 E-value=3.1 Score=34.91 Aligned_cols=84 Identities=10% Similarity=0.069 Sum_probs=54.0
Q ss_pred EEEEecCCC-cHHHHHHHHHHHHHhcCcEEEEEEEcCCc-----------------------------------------
Q 015527 287 LWLFAPAYG-SDKVILTFEEVAKALKGKLLHVYVEMNSE----------------------------------------- 324 (405)
Q Consensus 287 ~i~f~~~~~-~~~~~~~~~~va~~~~~~~~f~~id~~~~----------------------------------------- 324 (405)
+.|+..+|. |.++.+.+.++.++ +++.|.++...-.
T Consensus 102 ~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (241)
T 1v58_A 102 YVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPANVST 179 (241)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCCSSCCH
T ss_pred EEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCccccCCH
Confidence 334455666 99998888887765 5677776654200
Q ss_pred ------chhhhhhhhcCCCCCCCcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 325 ------GVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 325 ------~~~~~~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
.-+.++.+.+|+.. .|.+++.+.+|....+.|..+.+.|.++|+..+.
T Consensus 180 ~~~~~v~~~~~l~~~~gv~g--tPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 180 EQMKVLSDNEKLMDDLGANV--TPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp HHHHHHHHHHHHHHHHTCCS--SCEEEEEETTTEEEEEESSCCHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHcCCCC--CCEEEEECCCCCEEEecCCCCHHHHHHHHHHHHH
Confidence 00234556778865 6898887654544456788889999998877654
No 499
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=80.88 E-value=6.3 Score=30.80 Aligned_cols=38 Identities=13% Similarity=0.266 Sum_probs=27.4
Q ss_pred hhhhcCCCCCCCcEEEEEeCCCccccCCCCCCHHHHHHHHHHHhc
Q 015527 330 VSQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 374 (405)
Q Consensus 330 ~~~~~gi~~~~~p~i~i~~~~~~~y~~~~~~~~~~l~~Fi~~~~~ 374 (405)
..+.+|+.. .|.+++ +|+ .+.|..+.+.+.+.|+..+.
T Consensus 136 ~a~~~gv~g--tPt~~i---~g~--~~~G~~~~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 136 LAQKLGFNG--TPSFVV---EDA--LVPGFVEQSQLQDAVDRARK 173 (175)
T ss_dssp HHHHHTCCS--SSEEEE---TTE--EECSCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCcc--CCEEEE---CCE--EeeCCCCHHHHHHHHHHHHh
Confidence 456678764 688877 333 34677899999999988763
No 500
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=80.27 E-value=1.8 Score=35.39 Aligned_cols=39 Identities=18% Similarity=0.433 Sum_probs=32.2
Q ss_pred hHH-HhCCCcccceEEEEeCCeeeeeecCCCCHHHHHHHHHhhhc
Q 015527 118 DLA-KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (405)
Q Consensus 118 ~~~-~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (405)
..+ +++||.++||+++ +|+ .+.|..+.+.|.+.|.+.+.
T Consensus 158 ~~a~~~~GV~GtPtfvv--ng~---~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 158 DEAINQYNVSGTPSFMI--DGI---LLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHHCCCSSSEEEE--TTE---ECTTCCSHHHHHHHHHHHHT
T ss_pred HHHHHHcCCccCCEEEE--CCE---EEeCCCCHHHHHHHHHHHhh
Confidence 356 7899999999987 774 46899999999999987763
Done!