BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015529
(405 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6PBY7|CE044_DANRE UPF0533 protein C5orf44 homolog OS=Danio rerio GN=zgc:73187 PE=2
SV=2
Length = 412
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 189/357 (52%), Gaps = 43/357 (12%)
Query: 8 HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
H LA +VMRL +P+L P+ + P DLF+ L+ D +T K
Sbjct: 10 HLLALKVMRLTKPTLFTNMPVTCEDRDLPGDLFLR---------------LMKDDPSTVK 54
Query: 64 SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
A+++ L +L LPQ FG I+LGETF SYIS++N S+ V+D+++K
Sbjct: 55 G--------------AETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDILVK 100
Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
A++QT QR L L S S V ++ D ++ H+VKE+G H LVC Y+ GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKLY 159
Query: 184 LPQFFKFIVSNPLSVRTKV-RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLK 242
+FFKF V PL V+TK + FLEA I+N T S ++M++V EPS ++ T L
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSMMYNVTELN 219
Query: 243 --ADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQ 300
A G S + + + P+ R YLY LK + ++G V+GKL
Sbjct: 220 NVASGDESSESTFGKMSYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKLD 273
Query: 301 ITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
I W+TNLGE GRLQT Q+ ++ L++ +P V +++PF + K+TN +++
Sbjct: 274 IVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEFIPDTVDLEEPFDITCKITNCSER 330
>sp|Q5RCG0|CE044_PONAB UPF0533 protein C5orf44 homolog OS=Pongo abelii PE=2 SV=1
Length = 417
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 185/363 (50%), Gaps = 50/363 (13%)
Query: 8 HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
H LA +VMRL +P+L P+ + P DLF + + DDP
Sbjct: 10 HLLALKVMRLTKPTLFTNIPVTCEERDLPGDLF-NQLMRDDPSTV--------------- 53
Query: 64 SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
+ A+ + L +L LPQ FG I+LGETF SYIS++N S V+D+++K
Sbjct: 54 -------------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVK 100
Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
A++QT QR L L S + V ++ D ++ H+VKE+G H LVC Y+ GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMY 159
Query: 184 LPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNW 236
+FFKF V PL V+TK + V + FLEA I+N T S ++M++V EPS +
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMY 219
Query: 237 SATMLKA--DGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSN 294
+ T L + S SR +P YLY LK + ++G
Sbjct: 220 NVTELNSVSQAGESVSTFGSRAYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVT 272
Query: 295 VLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQ 354
V+GKL I W+TNLGE GRLQT Q+ ++ L++ +P V +++PF + K+TN
Sbjct: 273 VIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNC 332
Query: 355 TDK 357
+++
Sbjct: 333 SER 335
>sp|A5PLN9|CE044_HUMAN UPF0533 protein C5orf44 OS=Homo sapiens GN=C5orf44 PE=2 SV=2
Length = 417
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 42/359 (11%)
Query: 8 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
H LA +VMRL +P+L P+ + DL D+F+ L+ D +T
Sbjct: 10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMRDDPST------ 52
Query: 68 TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
+ A+ + L +L LPQ FG I+LGETF SYIS++N S V+D+++KA++Q
Sbjct: 53 --------VNGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104
Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
T QR L L S + V ++ D ++ H+VKE+G H LVC Y+ GE+ Y +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKF 163
Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
FKF V PL V+TK + V + FLEA I+N T S ++M++V EPS ++ T
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMYNVTE 223
Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
L + + + SR +P YLY LK + + ++G V+GK
Sbjct: 224 LNSVSQAGECVSTFGSRAYLQP-------MDTRQYLYCLKPKNEFAEKAGIIKGVTVIGK 276
Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
L I W+TNLGE GRLQT Q+ ++ L++ +P V +++PF + K+TN +++
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSER 335
>sp|Q3TIR1|CE044_MOUSE UPF0533 protein C5orf44 homolog OS=Mus musculus PE=2 SV=1
Length = 417
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 188/359 (52%), Gaps = 42/359 (11%)
Query: 8 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
H LA +VMRL +P+L P+ + DL D+F+ L+ D +T
Sbjct: 10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPST------ 52
Query: 68 TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
+ A+ + L +L LPQ FG I+LGETF SYIS++N S V+D+++KA++Q
Sbjct: 53 --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104
Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
T QR L L S + V ++ D ++ H+VKE+G H LVC Y+ GE+ Y +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKF 163
Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
FKF V PL V+TK + V + FLEA I+N T S ++M++V EPS ++ T
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTE 223
Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
L + + + SR +P YLY LK + ++G V+GK
Sbjct: 224 LNSVTQAGECISTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276
Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
L I W+TNLGE GRLQT Q+ ++ L++ +P V +++PF + K+TN +++
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSER 335
>sp|Q6GPR5|CE044_XENLA UPF0533 protein C5orf44 homolog OS=Xenopus laevis PE=2 SV=2
Length = 414
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 184/350 (52%), Gaps = 36/350 (10%)
Query: 8 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
H LA +VMRL +P+L P+ + DL D+F L+ D +T K +++
Sbjct: 10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFS---------TLMKDDPSTVKGAEI 58
Query: 68 TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
+ L +L LPQ FG I+LGETF SYIS++N S V+DV +KA++Q
Sbjct: 59 --------------LMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDVQVKADLQ 104
Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
T QR L L S + V ++ D ++ H+VKE+G H LVC Y+ GE+ Y +F
Sbjct: 105 TSSQR-LNLSASSAVVADLKPDSCIDDVIHHEVKEIGTHILVCAVSYTIQSGEKMYFRKF 163
Query: 188 FKFIVSNPLSVRTKV-RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
FKF V PL V+TK + FLEA I+N T S ++M++V EPS ++ + L
Sbjct: 164 FKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVSELNTVIT 223
Query: 247 HSDYNAQSR---EIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITW 303
+ D+ S + + P+ R YLY LK + ++G V+GKL I W
Sbjct: 224 NGDWKGSSTFGTKTYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKLDIVW 277
Query: 304 RTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN 353
+TNLGE GRLQT Q+ ++ L++ +P V +++PF + K+TN
Sbjct: 278 KTNLGERGRLQTSQLQRMAPGYGDVRLSIETIPDTVRLEEPFDITCKITN 327
>sp|Q5M887|CE044_RAT UPF0533 protein C5orf44 homolog OS=Rattus norvegicus PE=2 SV=2
Length = 418
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 185/355 (52%), Gaps = 42/355 (11%)
Query: 8 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
H LA +VMRL +P+L P+ + DL D+F+ L+ D +T
Sbjct: 10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPST------ 52
Query: 68 TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
+ A+ + L +L LPQ FG I+LGETF SYIS++N S V+D+++KA++Q
Sbjct: 53 --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104
Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
T QR L L S + V ++ D ++ H+VKE+G H LVC Y+ GE+ Y +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKF 163
Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
FKF V PL V+TK + V + FLEA I+N T S ++M++V EPS ++ T
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTE 223
Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
L + + + SR +P YLY LK + ++G V+GK
Sbjct: 224 LNSVNQAGECVSTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276
Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN 353
L I W+TNLGE GRLQT Q+ ++ L++ +P V +++PF + K+TN
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITN 331
>sp|A7MB76|CE044_BOVIN UPF0533 protein C5orf44 homolog OS=Bos taurus PE=2 SV=1
Length = 417
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 186/359 (51%), Gaps = 42/359 (11%)
Query: 8 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
H LA +VMRL +P+L P+ + DL D+F+ L+ D +T
Sbjct: 10 HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMRDDPST------ 52
Query: 68 TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
+ A+ + L +L LPQ FG I+LGETF SYIS++N S V+D+++KA++Q
Sbjct: 53 --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104
Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
T QR L L S + V ++ D ++ H+VKE+G H LVC Y+ GE+ Y +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQSGEKMYFRKF 163
Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
FKF V PL V+TK + V + FLEA I+N T S ++M++V EPS ++
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVAE 223
Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
L + + SR +P YLY LK + ++G V+GK
Sbjct: 224 LNSVNQAGECVTTFGSRAYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276
Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
L I W+TNLGE GRLQT Q+ ++ L++ +P V +++PF + K+TN +++
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSER 335
>sp|Q0VFT9|CE044_XENTR UPF0533 protein C5orf44 homolog OS=Xenopus tropicalis PE=2 SV=1
Length = 412
Score = 188 bits (477), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 183/348 (52%), Gaps = 34/348 (9%)
Query: 8 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
H LA +VMRL +P+L P+ + DL D+F L+ D +T K
Sbjct: 10 HLLALKVMRLTKPTLFTNIPVTCEERDL--PGDLFS---------TLMKDDPSTVKG--- 55
Query: 68 TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
A+++ L +L LPQ FG I+LGETF SYIS++N S V+D+ +KA++Q
Sbjct: 56 -----------AETLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDIQVKADLQ 104
Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
T QR L L S + V ++ D ++ H+VKE+G H LVC Y+ GE+ Y +F
Sbjct: 105 TSSQR-LNLSASTAVVSELKPDSCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKMYFRKF 163
Query: 188 FKFIVSNPLSVRTKV-RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
FKF V PL V+TK + FLEA I+N T S ++M++V EPS ++ + L
Sbjct: 164 FKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVSELNTVIT 223
Query: 247 HSD-YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRT 305
+ D + + + P+ R YLY LK + ++G V+GKL I W+T
Sbjct: 224 NGDGCSTFGTKTYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKLDIVWKT 277
Query: 306 NLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN 353
NLGE GRLQT Q+ ++ L++ +P V +++PF + K+TN
Sbjct: 278 NLGERGRLQTSQLQRMAPGYGDVRLSIETIPDTVRLEEPFDITCKITN 325
>sp|Q55EX6|U533_DICDI UPF0533 protein OS=Dictyostelium discoideum GN=DDB_G0269062 PE=3
SV=2
Length = 511
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 208/408 (50%), Gaps = 52/408 (12%)
Query: 7 THSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSD 66
H L +VMRL +P++ P+ + DL + I +++L V ++ S+D
Sbjct: 4 NHLLNLKVMRLSKPNIPTINPILCEKQDL--PYETMSTSIDSTSLS---MGSVNSSGSND 58
Query: 67 LTYRSRFLLHDSADSIGLSGLLV---LPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
+ L+ ++ + I + GL V L G IYLGE FC YIS+NN S +VR+V +K
Sbjct: 59 ----NNQLIGNNGNPINMEGLGVTSMLQLQSGVIYLGEMFCCYISLNNHSPYQVRNVFLK 114
Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
E+QT RI LLD+ + V + G DF+V+ +VKE G + LVC Y+ EGE+K
Sbjct: 115 VELQTTSSRIPLLDSEQQSVPTFNPGFSSDFVVQREVKESGVNILVCAVNYTTPEGEQKK 174
Query: 184 LPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKA 243
++FKF V NPL ++T++ + + FLEAC+EN T+ +L+++ + FEP +++++ +
Sbjct: 175 FRKYFKFQVLNPLVLKTRIHNLPNVVFLEACLENATQGSLFIESILFEPIEHFNSKDISF 234
Query: 244 DGPHSDYNA----------------------------QSREIFKPPVLIRSG-------G 268
+ D N + E+ + L S G
Sbjct: 235 ENSLDDNNNLDNNNNNLENDNNLNNLEFKLNEKGLIENTDELLENIKLTTSDNIVFLKQG 294
Query: 269 GIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEI 328
YL+Q ++ V+ + S LG+L ITWR+ GE GRL+T I + ++I
Sbjct: 295 CSRQYLFQ---ITPKDIENVESKNSLPLGRLDITWRSYFGEIGRLKTAAI-QRKLNQEDI 350
Query: 329 ELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKV 376
E +++ +P + ++KPF + KL+N++++ P + L +N D K+
Sbjct: 351 ECSLINIPDKIKLEKPFSVIAKLSNKSNRILYP-QFMLVRNKMDGIKI 397
>sp|A8WX89|U533_CAEBR UPF0533 protein CBG04321 OS=Caenorhabditis briggsae GN=CBG04321
PE=3 SV=2
Length = 401
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 187/368 (50%), Gaps = 58/368 (15%)
Query: 1 MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
+S++ LA RVMRL RP + P D F DP+ + L++ V
Sbjct: 5 ISNSSTQQLLALRVMRLARP--------KFAPLDGFS-----HDPVDPTGFGELLAGKV- 50
Query: 61 TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
++++ SR HD + + L+ PQ F IYLGETF Y+++ N S V +V
Sbjct: 51 ----AEISKESR---HD----LPIGEYLIAPQMFENIYLGETFTFYVNVVNESESNVVNV 99
Query: 121 VIKAEIQTDKQRILL-LDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
+K E+QT QR++L +ES + G+ ++ H+VKE+G H L+C+ Y G
Sbjct: 100 SLKCELQTSTQRVVLPCSVQDVTIESTKCDGQ---VISHEVKEIGQHILICSVNYKTLSG 156
Query: 180 ERKYLPQFFKFIVSNPLSVRTKVRVVKEIT----FLEACIENHTKSNLYMDQVEFEPSQN 235
E Y +FFKF VS P+ V+TK ++ +LEA IEN + SN+++++VE +PSQ+
Sbjct: 157 ENMYFRKFFKFPVSKPIDVKTKFYSAEDNANQDVYLEAQIENTSNSNMFLERVELDPSQH 216
Query: 236 WSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGS-- 293
+ T + H D + ++ KP I +L+ L SPV V +
Sbjct: 217 YKVTSIS----HEDEFPEVGKLLKP-------KDIRQFLFCL--------SPVDVNNTLG 257
Query: 294 ----NVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKL 349
+GKL ++WRT++GE GRLQT + ++ L+V + P+ V + KPF +
Sbjct: 258 YKDLTSIGKLDMSWRTSMGEKGRLQTSALQRIAPGYGDVRLSVEKTPACVDVQKPFEVAC 317
Query: 350 KLTNQTDK 357
+L N +++
Sbjct: 318 RLYNCSER 325
>sp|Q95QQ2|U533_CAEEL UPF0533 protein C56C10.7 OS=Caenorhabditis elegans GN=C56C10.7 PE=1
SV=1
Length = 401
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 184/371 (49%), Gaps = 60/371 (16%)
Query: 1 MSSTPGTHS----LAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLIS 56
M+ P + S LA RVMRL RP + P D F DP+ + L++
Sbjct: 1 MADNPASSSSQQLLALRVMRLARP--------KFAPVDGFS-----HDPVDPTGFGELLA 47
Query: 57 SDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLE 116
V S+++ SR + + L+ PQ F IYLGETF Y+++ N S
Sbjct: 48 GKV-----SEISKESR-------QDLPIGEYLIAPQMFENIYLGETFTFYVNVVNESEKT 95
Query: 117 VRDVVIKAEIQTDKQRILL-LDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYS 175
V V +K E+QT QR++L + +ES + G+ ++ H+VKE+G H L+C+ Y
Sbjct: 96 VSSVSLKCELQTSTQRVVLPCSVQDATIESSKCEGQ---VISHEVKEIGQHILICSVNYK 152
Query: 176 DGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEIT----FLEACIENHTKSNLYMDQVEFE 231
GE Y +FFKF VS P+ V+TK ++ +LEA IEN + +N+++++VE +
Sbjct: 153 TSNGENMYFRKFFKFPVSKPIDVKTKFYSAEDNANQDVYLEAQIENTSNANMFLEKVELD 212
Query: 232 PSQNWSATMLKADGPHSDYNAQSREIFKPP-----VLIRSGGGIHNYLYQLKMLSHGSSS 286
PSQ+++ T + H D ++ KP + + +HN L + S
Sbjct: 213 PSQHYNVTSIA----HEDEFGDVGKLLKPKDIRQFLFCLTPADVHNTLGYKDLTS----- 263
Query: 287 PVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFL 346
+GKL ++WRT++GE GRLQT + ++ L+V + P+ V + KPF
Sbjct: 264 ---------IGKLDMSWRTSMGEKGRLQTSALQRIAPGYGDVRLSVEKTPACVDVQKPFE 314
Query: 347 LKLKLTNQTDK 357
+ +L N +++
Sbjct: 315 VSCRLYNCSER 325
>sp|Q95TN1|U533_DROME UPF0533 protein CG4953 OS=Drosophila melanogaster GN=CG4953 PE=2
SV=1
Length = 438
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 187/357 (52%), Gaps = 41/357 (11%)
Query: 5 PGTHSLAFRVMRLCRPSL-HVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
P H +A +VMRL RP+L + P + +PTDL ++++
Sbjct: 6 PDAHLVALKVMRLMRPTLVGLGPVVTCEPTDLV--------------------QRFSSSQ 45
Query: 64 SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
SD + A+++ +L+LPQ+FG+IYLGETF SYI ++N++ V V +K
Sbjct: 46 ESD------GMSGACAETLAAGQVLLLPQSFGSIYLGETFASYICVHNTTPNPVECVTVK 99
Query: 124 AEIQTDKQRILLL--DTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGER 181
A++Q++ RI L + +KSPV + GG D ++ ++VKE+G H LVC YS G
Sbjct: 100 ADLQSNTSRINLSMHENAKSPV-VLPPGGTIDDVIRYEVKEIGTHILVCEVNYSTPAGYA 158
Query: 182 KYLPQFFKFIVSNPLSVRTKV--RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSAT 239
+ L +FFKF V PL V+TK + EI +LEA I+N T S +++VE + S+++S T
Sbjct: 159 QSLRKFFKFQVLKPLDVKTKFYNAEIDEI-YLEAQIQNVTTSPFCLEKVELDGSEDYSVT 217
Query: 240 MLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 299
L P+ + + + +P +LY +K + + ++ N +GKL
Sbjct: 218 PLNT-LPNGESVFTVKHMLQP-------NNSCQFLYCIKPKGDIAKNVDTLRQFNNVGKL 269
Query: 300 QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD 356
I WR+NLGE GRLQT Q+ K + L V++ + + I F ++TN ++
Sbjct: 270 DIVWRSNLGEKGRLQTSQLQRLPFECKTLRLEVLDAKNTIKIGTIFTFNCRVTNTSE 326
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 35.4 bits (80), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 127 QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQ 186
QTD++R L S++ ++ + DF + D+ ++G +T+ TA DG+ P
Sbjct: 1448 QTDERRFLY--DSEAKIDEANVEIKTDFAEKVDINKVGTYTVTLTATNEDGQAAN---PV 1502
Query: 187 FFKFIVSNPLSVRTKVRVVKE 207
IVS+ + + V+ V E
Sbjct: 1503 EVSVIVSDAAAEKVNVKYVDE 1523
>sp|Q2NJ77|UVRB_AYWBP UvrABC system protein B OS=Aster yellows witches'-broom phytoplasma
(strain AYWB) GN=uvrB PE=3 SV=1
Length = 667
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 1 MSSTPGTHSLAFR---VMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISS 57
+S+TPG + L + V ++ RP+ ++P + V PT+ + + F+ N ++ +
Sbjct: 394 LSATPGDYELTKKIPIVEQIIRPTFVLDPEIEVRPTNNQMDDLYFEIKHQTKNNQRILIT 453
Query: 58 DVTTNKSSDLT 68
+T N S DLT
Sbjct: 454 TLTINMSEDLT 464
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 127 QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQ 186
QTD++R L S + ++ + DF + D+ ++G +T+ TA DG+ P
Sbjct: 1445 QTDERRFLY--DSDAKIDEANVEIKTDFAEKVDINKVGTYTVTLTATNEDGQAAN---PV 1499
Query: 187 FFKFIVSNPLSVRTKVRVVKE 207
IVS+ + + V+ V E
Sbjct: 1500 EVSVIVSDAAAEKVNVKYVDE 1520
>sp|Q42966|NRL4B_TOBAC Bifunctional nitrilase/nitrile hydratase NIT4B OS=Nicotiana tabacum
GN=NIT4B PE=2 SV=1
Length = 348
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 87 LLVLPQAF-GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVES 145
L+V P+AF G G TF +SI N + K + + K +D V+
Sbjct: 64 LVVFPEAFIGGYPRGSTFG--VSIGNRTA--------KGKEEFRKYHASAIDVPGPEVDR 113
Query: 146 IRA-GGRYDFIVEHDVKELGAHTLVCTALYSDGEG-----ERKYLPQFFKFIV 192
+ A G+Y + V E +TL CT L+ D +G RK +P + I+
Sbjct: 114 LAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHYLGKHRKIMPTALERII 166
>sp|Q42965|NRL4A_TOBAC Bifunctional nitrilase/nitrile hydratase NIT4A OS=Nicotiana tabacum
GN=NIT4A PE=2 SV=1
Length = 349
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 87 LLVLPQAF-GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVES 145
L+V P+AF G G TF +SI N + K + + K +D V+
Sbjct: 64 LVVFPEAFIGGYPRGSTFG--VSIGNRTA--------KGKEEFRKYHASAIDVPGPEVDR 113
Query: 146 IRA-GGRYDFIVEHDVKELGAHTLVCTALYSDGEG-----ERKYLPQFFKFIV 192
+ A G+Y + V E +TL CT L+ D +G RK +P + I+
Sbjct: 114 LAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGHFLGKHRKIMPTALERII 166
>sp|Q6YQE1|UVRB_ONYPE UvrABC system protein B OS=Onion yellows phytoplasma (strain OY-M)
GN=uvrB PE=3 SV=2
Length = 670
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 1 MSSTPGTHSLAFR---VMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISS 57
+S+TPG + L + V ++ RP+ ++P + + PT + + F+ N ++ +
Sbjct: 394 LSATPGNYELTKKIPIVEQIIRPTFVLDPEIEIRPTHNQMDDLYFEIKHQTKNNQRILIT 453
Query: 58 DVTTNKSSDLT 68
+T N S DLT
Sbjct: 454 TLTINMSEDLT 464
>sp|O53508|MPTA_MYCTU Alpha-(1->6)-mannopyranosyltransferase A OS=Mycobacterium
tuberculosis GN=mptA PE=3 SV=1
Length = 516
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 238 ATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLG 297
A+ L GP + + + P VLI GG+HN + + +++ G + + VQG NV G
Sbjct: 224 ASHLGTHGPTALWIC----VLNPLVLIHLMGGVHNEMLMVGLMTAGIA--LTVQGRNVAG 277
Query: 298 KLQIT 302
+ IT
Sbjct: 278 IILIT 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,238,512
Number of Sequences: 539616
Number of extensions: 6203428
Number of successful extensions: 14133
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 14073
Number of HSP's gapped (non-prelim): 23
length of query: 405
length of database: 191,569,459
effective HSP length: 120
effective length of query: 285
effective length of database: 126,815,539
effective search space: 36142428615
effective search space used: 36142428615
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)