Query 015529
Match_columns 405
No_of_seqs 148 out of 177
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 14:12:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015529.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015529hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qsv_A Uncharacterized protein 90.6 8.4 0.00029 35.0 15.3 127 93-229 11-156 (220)
2 2ys4_A Hydrocephalus-inducing 88.7 2.8 9.5E-05 34.6 9.6 86 79-174 17-104 (122)
3 2xzz_A Protein-glutamine gamma 83.8 3.2 0.00011 33.8 7.2 71 95-173 14-86 (102)
4 3idu_A Uncharacterized protein 81.7 11 0.00037 31.8 9.9 70 323-400 14-83 (127)
5 2e6j_A Hydin protein; PAPD, st 77.2 8.5 0.00029 30.6 7.6 72 93-172 18-92 (112)
6 1ex0_A Coagulation factor XIII 76.1 61 0.0021 35.1 15.8 215 154-398 451-694 (731)
7 3hrz_B Cobra venom factor; ser 75.7 24 0.00082 32.8 11.4 83 308-398 64-151 (252)
8 2xzz_A Protein-glutamine gamma 70.7 15 0.00051 29.8 7.5 60 334-398 11-70 (102)
9 2q3z_A Transglutaminase 2; tra 63.9 20 0.00067 38.7 8.7 74 93-173 593-669 (687)
10 1z9l_A Vesicle-associated memb 62.2 22 0.00075 29.5 7.1 49 343-398 27-75 (128)
11 1vjj_A Protein-glutamine gluta 60.2 21 0.00071 38.5 8.1 73 93-173 600-675 (692)
12 1ex0_A Coagulation factor XIII 57.5 23 0.0008 38.3 7.9 73 93-173 636-710 (731)
13 3qbt_B Inositol polyphosphate 56.9 27 0.00093 29.6 6.9 76 93-172 35-123 (140)
14 3es6_B Prolactin-inducible pro 56.5 19 0.00066 30.0 5.7 43 325-369 5-47 (118)
15 2cri_A Vesicle-associated memb 53.2 27 0.00091 29.8 6.3 49 343-398 31-79 (147)
16 3isy_A Bsupi, intracellular pr 52.9 90 0.0031 26.0 9.3 92 99-192 16-119 (120)
17 2q3z_A Transglutaminase 2; tra 51.4 14 0.00049 39.7 5.1 62 326-392 471-539 (687)
18 1g0d_A Protein-glutamine gamma 51.3 32 0.0011 37.0 7.7 73 94-173 592-666 (695)
19 1vjj_A Protein-glutamine gluta 50.9 10 0.00035 40.8 3.8 64 324-392 478-547 (692)
20 3idu_A Uncharacterized protein 50.0 96 0.0033 25.9 9.1 73 96-176 28-100 (127)
21 1suj_A CONE arrestin; sensory 49.3 27 0.00091 35.1 6.4 30 97-126 205-234 (392)
22 3ugu_A S-arrestin; arrestin fo 49.3 49 0.0017 33.0 8.2 72 324-398 209-289 (380)
23 1msp_A MSP, major sperm protei 44.1 66 0.0022 26.6 7.2 46 345-397 27-72 (126)
24 2qsv_A Uncharacterized protein 43.8 82 0.0028 28.3 8.4 78 92-178 126-208 (220)
25 2l0d_A Cell surface protein; s 43.1 1.4E+02 0.0047 24.5 9.2 69 326-401 3-71 (114)
26 2d7p_A Filamin-C; beta-sandwic 41.3 49 0.0017 26.8 5.8 64 95-172 22-85 (112)
27 1g0d_A Protein-glutamine gamma 40.2 18 0.00061 39.0 3.6 62 325-392 470-537 (695)
28 1wic_A Hypothetical protein ri 38.8 50 0.0017 28.4 5.7 46 346-398 38-83 (152)
29 2l0d_A Cell surface protein; s 38.6 1.6E+02 0.0056 24.1 9.1 72 97-175 15-87 (114)
30 2icn_B Prolactin-inducible pro 36.9 50 0.0017 27.5 5.2 35 334-369 13-47 (118)
31 3hrz_B Cobra venom factor; ser 35.6 1.3E+02 0.0045 27.7 8.6 79 88-173 86-167 (252)
32 4fxk_B Complement C4-A alpha c 34.7 68 0.0023 34.3 7.2 73 322-398 148-221 (767)
33 4acq_A Alpha-2-macroglobulin; 33.7 3.3E+02 0.011 31.6 13.1 73 321-397 762-835 (1451)
34 2pn5_A TEP1R, thioester-contai 32.3 1.2E+02 0.0042 34.5 9.2 74 322-398 660-738 (1325)
35 3lag_A Uncharacterized protein 31.9 11 0.00039 29.7 0.4 69 145-216 23-95 (98)
36 1row_A SSP-19, MSP-domain prot 31.2 1.4E+02 0.0049 24.1 7.0 44 346-396 18-61 (109)
37 2hr0_B Complement C3 alpha' ch 30.5 2E+02 0.0069 31.5 10.2 72 321-398 74-151 (915)
38 3ugu_A S-arrestin; arrestin fo 28.7 51 0.0017 32.9 4.5 29 97-125 224-252 (380)
39 3qbt_B Inositol polyphosphate 28.0 1E+02 0.0035 25.9 5.9 58 338-397 38-96 (140)
40 3hs8_A Adaptor protein complex 27.3 1.1E+02 0.0039 28.8 6.6 76 97-176 64-142 (273)
41 3nrf_A APAG protein; structura 27.1 1.9E+02 0.0066 23.6 7.0 56 346-401 30-88 (106)
42 3prx_B Cobra venom factor; imm 27.1 2.8E+02 0.0095 32.8 11.1 71 322-398 808-883 (1642)
43 2aw2_A B and T lymphocyte atte 25.7 78 0.0027 26.4 4.4 46 327-386 10-59 (120)
44 2huh_A Putative DNA mismatch r 24.1 1.2E+02 0.0042 26.2 5.6 64 322-393 5-68 (147)
45 2r39_A FIXG-related protein; s 24.0 1.2E+02 0.0043 24.3 5.5 65 324-394 7-76 (118)
46 1m1s_A WR4; structural genomic 23.9 1.9E+02 0.0065 23.8 6.6 44 346-396 26-69 (116)
47 1row_A SSP-19, MSP-domain prot 23.6 2.4E+02 0.0081 22.7 7.1 59 104-171 18-77 (109)
48 1kyf_A Alpha-adaptin C; protei 23.5 1.3E+02 0.0045 27.8 6.2 77 97-177 38-117 (247)
49 1suj_A CONE arrestin; sensory 22.8 1.3E+02 0.0044 30.1 6.2 46 323-369 189-235 (392)
50 3nm7_A Uncharacterized protein 22.7 55 0.0019 27.5 3.0 34 302-335 1-44 (127)
51 2g30_A AP-2 complex subunit be 21.6 1.2E+02 0.0043 28.3 5.6 53 342-397 54-107 (258)
No 1
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=90.58 E-value=8.4 Score=35.01 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=82.6
Q ss_pred cccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEecccc---CceEEE
Q 015529 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKEL---GAHTLV 169 (405)
Q Consensus 93 sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~---G~HiLv 169 (405)
.||.+-.|++=...+.+.|.++++++-..++ .++- ... . .....|+||+.-+..+.|+-+.. |.+.=.
T Consensus 11 dFg~v~~g~~~~~~~~i~N~g~~pl~i~~~~----~p~~-~~~-~---~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~ 81 (220)
T 2qsv_A 11 LFPISMPEDEGVVRLVVNNTDESDLQVAVVS----LPSF-VSL-D---DRAFRLQAREPRELNLSLAVPRNMPPGMKDEP 81 (220)
T ss_dssp ECCSBCTTCCCEEEEEEEECSSSCEEEEEEE----CCTT-EEC-S---CCEEEECSSSCEEEEEEECCCTTCCSEEEEEE
T ss_pred EcccccCCCcceEEEEEEeCCCCceEEEecc----CCCc-eEe-e---eCcceeCCCCceEEEEEEcchhcccCCceeeE
Confidence 6999999999999999999999988765443 2332 111 1 12367999999999999999886 655555
Q ss_pred EEEEEEcC-CCcccccceeeeEEeeC-----------CeEEeEEEE---Ee-CCeeEEEEEEEecCCccEEEEeEE
Q 015529 170 CTALYSDG-EGERKYLPQFFKFIVSN-----------PLSVRTKVR---VV-KEITFLEACIENHTKSNLYMDQVE 229 (405)
Q Consensus 170 c~V~Y~~~-~Ge~~~frK~fkF~v~~-----------PL~VkTK~~---~~-~~~~~LEaqlqN~s~~~l~Le~v~ 229 (405)
++|...++ +++...-+=..+..+.. -+.+. ..+ .+ .+..--+..+.|+++.||.|.+|.
T Consensus 82 i~v~~~~~~~~~~~~~~i~v~g~v~p~~~~~~~~~~~~i~~~-~~~dfG~i~g~~~~~~f~i~N~G~~pL~I~~v~ 156 (220)
T 2qsv_A 82 LVLEVTSPETGKKAVDSVMVSLPLVDNFPALTAAQTGVMELS-TYLDMGQLDGETTKAAIEIRNVGAGPLRLHSVT 156 (220)
T ss_dssp EEEEEECTTTCCEEEEEEEEEEEECCCGGGCCGGGCCCEECC-CEEEEEECTTSCEEEEEEEEECSSSCEEEEEEE
T ss_pred EEEEEEcCCCCcccccEEEEEEEEcccchhhhhccCCEEEEE-eEEeeeccCCCeEEEEEEEEECCCCCEEEEEEE
Confidence 66665542 22211111112222211 13444 333 23 345667899999999999999996
No 2
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.71 E-value=2.8 Score=34.56 Aligned_cols=86 Identities=15% Similarity=0.244 Sum_probs=64.5
Q ss_pred CCccCCCccccccc--cccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEE
Q 015529 79 ADSIGLSGLLVLPQ--AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIV 156 (405)
Q Consensus 79 ~~~~~ls~~L~LP~--sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv 156 (405)
..+.+.-+.|.+|+ .||..-+|++=...|.+.|.+..+++ ++ +..++ .+.... ....|.||+..+..|
T Consensus 17 l~a~~~~~~l~~p~~l~fg~~~v~~~~~~~~~l~N~g~~~~~---f~--~~~~~-~F~i~P----~~g~L~pg~~~~i~V 86 (122)
T 2ys4_A 17 IKARGARAILDFPDKLNFSTCPVKYSTQKILLVRNIGNKNAV---FH--IKTCR-PFSIEP----AIGTLNVGESMQLEV 86 (122)
T ss_dssp SCCCSCCCCCCCCSEECCCSEESSSCEEEEEEEECCSSSCEE---EE--EECCT-TEEEES----SEEEECTTCEEEEEE
T ss_pred EEEEcCCcEECCCCeeecCCeecCCeEEEEEEEEECCCCCEE---EE--EecCC-CeEEEC----CcCEECCCCEEEEEE
Confidence 45556667888886 89999999999999999999887554 22 33322 233322 136899999999999
Q ss_pred EEeccccCceEEEEEEEE
Q 015529 157 EHDVKELGAHTLVCTALY 174 (405)
Q Consensus 157 ~helKE~G~HiLvc~V~Y 174 (405)
.|.=++.|.|.-.-.+.|
T Consensus 87 ~F~P~~~g~~~~~l~v~~ 104 (122)
T 2ys4_A 87 EFEPQSVGDHSGRLIVCY 104 (122)
T ss_dssp EECCSSSBCCCCBCEEEE
T ss_pred EEEcCCCccEEEEEEEEE
Confidence 999999999966555556
No 3
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=83.85 E-value=3.2 Score=33.83 Aligned_cols=71 Identities=17% Similarity=0.158 Sum_probs=58.0
Q ss_pred cceeeccceEEEEEEecCCCcceeeEEEEEEEeCCC--ceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEEE
Q 015529 95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDK--QRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA 172 (405)
Q Consensus 95 G~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s--~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~V 172 (405)
|..-+|+.+.+.+++.|-.+.++++..+.+|=--=. .++. ...+.||+.+...+.+-=+..|.+.|.+..
T Consensus 14 g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~--------~~~v~pg~~~~~~~~~~P~~~G~~~L~a~f 85 (102)
T 2xzz_A 14 GAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILN--------VGDIGGNETVTLRQSFVPVRPGPRQLIASL 85 (102)
T ss_dssp SCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEEE--------ECCBCTTCEEEEEEEECCCSCSSCCCEEEE
T ss_pred CCcccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEEE--------cCcCCCCCEEEEEEEEecCcccceEEEEEE
Confidence 567889999999999999999999999998843222 2222 245899999999999999999999998875
Q ss_pred E
Q 015529 173 L 173 (405)
Q Consensus 173 ~ 173 (405)
+
T Consensus 86 ~ 86 (102)
T 2xzz_A 86 D 86 (102)
T ss_dssp E
T ss_pred E
Confidence 4
No 4
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=81.67 E-value=11 Score=31.84 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=53.3
Q ss_pred CcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeEEE
Q 015529 323 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWI 400 (405)
Q Consensus 323 ~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~~~ 400 (405)
...+||.+.+ ..|+.+..+++-+|+++|+|.-......+.|.+.-+ ... ++-. .. .|++|.+..--|.|.
T Consensus 14 ~~~pDL~V~i-s~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvn--g~~--v~t~--~v-~La~G~s~tv~f~~~ 83 (127)
T 3idu_A 14 FEFPDLTVEI-KGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYIN--GTL--YKNW--TV-SLGPKEEKVLTFNWT 83 (127)
T ss_dssp CSSCCEEEEE-ESCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEET--TEE--EEEE--EE-EECTTCEEEEEEEEC
T ss_pred ccCCCeEEEe-cCCCcccCCCEEEEEEEEEECCCCccCCcEEEEEEC--CEE--EeeE--Ee-ccCCCCeEEEEEEEE
Confidence 6688998866 589999999999999999999766666677777655 222 2222 22 499999999999885
No 5
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.19 E-value=8.5 Score=30.62 Aligned_cols=72 Identities=11% Similarity=0.190 Sum_probs=50.7
Q ss_pred cccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCC---ceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEE
Q 015529 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDK---QRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLV 169 (405)
Q Consensus 93 sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s---~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLv 169 (405)
.||.+++|+.=...+.+.|.+..++. ++.. ...+ ...... .+-..|.||+..+..|.|.-+..|.+.-.
T Consensus 18 dFG~v~~g~~~~~~~~l~N~g~~p~~---~~~~-~~~~~~~~~f~v~----p~~g~i~pg~~~~i~V~f~~~~~g~f~~~ 89 (112)
T 2e6j_A 18 DIGKVFTGSAHCYEAILYNKGSIDAL---FNMT-PPTSALGACFVFS----PKEGIIEPSGVQAIQISFSSIILGNFEEE 89 (112)
T ss_dssp EEEEEESSCCEEEEEEEEECCSSCEE---EEEC-CCSSHHHHHCEEE----SSEEEECTTBCCEEEEEECCCCCEEEEEE
T ss_pred ecEeEEECCEEEEEEEEEECCcceEE---EEEe-cCCccccCcEEEE----CCcCEECCCCEEEEEEEEECCCcceEEEE
Confidence 79999999999999999999886442 2221 1111 112221 12357999999999999999999987766
Q ss_pred EEE
Q 015529 170 CTA 172 (405)
Q Consensus 170 c~V 172 (405)
.+|
T Consensus 90 i~v 92 (112)
T 2e6j_A 90 FLV 92 (112)
T ss_dssp ECE
T ss_pred EEE
Confidence 554
No 6
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=76.14 E-value=61 Score=35.13 Aligned_cols=215 Identities=12% Similarity=0.007 Sum_probs=117.7
Q ss_pred EEEEEeccccCceEEEEEE----------EEEcCCC---cccccceeeeEEee------------CCeEEeEEEE--EeC
Q 015529 154 FIVEHDVKELGAHTLVCTA----------LYSDGEG---ERKYLPQFFKFIVS------------NPLSVRTKVR--VVK 206 (405)
Q Consensus 154 ~iv~helKE~G~HiLvc~V----------~Y~~~~G---e~~~frK~fkF~v~------------~PL~VkTK~~--~~~ 206 (405)
..++.+-+..|..|.+=+| .|.-++| |+..|.|-.++... .++.++-|.- .+.
T Consensus 451 ~~~~~~t~~VG~~ISTKaVG~d~ReDIT~~YKypEGS~eER~~~~kA~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~iG 530 (731)
T 1ex0_A 451 VVENVDATHIGKLIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTSRSMKSRSNVDMDFEVENAVLG 530 (731)
T ss_dssp EEEEEECSSTTCEEEEECSSSSCEEECHHHHCCCTTSHHHHHHHHHHHTTTCBCCSCCCCC-----CEEEEEEECCCBTT
T ss_pred EEEeeccccccceEeccCCCCCCcccccccCcCCCCCHHHHHHHHHHHhhcccccccccccccCCCCeEEEEecCCCCCC
Confidence 3567777888888887666 5555555 34444444333111 2344444442 136
Q ss_pred CeeEEEEEEEecCCccEEEEeEEeeecCCceeeeecCCCCCCCCCCCccccc-CCceEEcCCCCeeeEEEEEeecCCCCC
Q 015529 207 EITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIF-KPPVLIRSGGGIHNYLYQLKMLSHGSS 285 (405)
Q Consensus 207 ~~~~LEaqlqN~s~~~l~Le~v~lep~~~~~~~~ln~~~~~~~~~~~~~~~~-~~~~l~~~~~d~rqyLf~l~p~~~~~~ 285 (405)
+++-|-+.|.|.|+..- .|.+.- .+..+-- .+.. ...+. ..-.+-++|++....-..|....-..
T Consensus 531 ~df~v~l~~~N~s~~~~---~v~~~l----~a~~v~Y---tG~~---~~~~~~~~~~~~L~p~~~~~i~~~i~y~~Y~~- 596 (731)
T 1ex0_A 531 KDFKLSITFRNNSHNRY---TITAYL----SANITFY---TGVP---KAEFKKETFDVTLEPLSFKKEAVLIQAGEYMG- 596 (731)
T ss_dssp CCEEEEEEEEECSSSCE---EEEEEE----EEEEECT---TSCE---EEEEEEEEEEEEECTTEEEEEEEEECHHHHTT-
T ss_pred CCEEEEEEEEECCCCCE---EEEEEE----EEEEEee---CCcc---ccceeEeeEEEEECCCceEEEEEEECHHHHhh-
Confidence 78999999999998763 233221 1111100 0000 00011 11123355666666665655543221
Q ss_pred CCccccCCeeeeEE-EEEEecCCCCceeeeeeccccccCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEE
Q 015529 286 SPVKVQGSNVLGKL-QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEI 364 (405)
Q Consensus 286 ~~~~~~g~~~lGkL-dI~WRs~~Ge~G~LqTs~L~~~~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l 364 (405)
+ ..-+ .+=++ -+..-...++.-.-+.- -....++|.+.+..- .++++|+++++.++|--+.++..-.+
T Consensus 597 ~-L~d~---~~i~~~a~~~v~et~~~~~~~~d----i~l~~P~l~I~v~g~---~~v~~~l~v~vsf~NPL~~~L~~c~~ 665 (731)
T 1ex0_A 597 Q-LLEQ---ASLHFFVTARINETRDVLAKQKS----TVLTIPEIIIKVRGT---QVVGSDMTVTVQFTNPLKETLRNVWV 665 (731)
T ss_dssp T-CCTT---CEEEEEEEEEETTTCCEEEEEEE----EECBCCCCEEEEEEC---CBTTSCEEEEEEEECCSSSCEEEEEE
T ss_pred h-ccCC---CEEEEEEEEEECCCCeEEEEEEE----EEEeCCCEEEEeCCC---cccCCeEEEEEEEECCCCCcccceEE
Confidence 1 1111 11122 23333333332222211 135566777776544 47899999999999999999988899
Q ss_pred EEecCCCCCeeEEEEcceeeeeccCCceeeeeeE
Q 015529 365 WLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFM 398 (405)
Q Consensus 365 ~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~ 398 (405)
.|+-..+ +.- --+.++.++|+.+...-+-
T Consensus 666 ~vEG~GL--~~~---~~~~~~~v~pg~~~~~~~~ 694 (731)
T 1ex0_A 666 HLDGPGV--TRP---MKKMFREIRPNSTVQWEEV 694 (731)
T ss_dssp EEEETTT--EEE---EEEEEEEECTTCEEEEEEE
T ss_pred EEECCCC--Cce---eeEecCccCCCCEEEEEEE
Confidence 8887744 322 3356799999999877654
No 7
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=75.68 E-value=24 Score=32.83 Aligned_cols=83 Identities=11% Similarity=0.011 Sum_probs=58.6
Q ss_pred CCceeeeeeccccccCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEc---c--e
Q 015529 308 GEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMIN---G--L 382 (405)
Q Consensus 308 Ge~G~LqTs~L~~~~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~---~--~ 382 (405)
++.|.-.... ......+++.+.+ ++|-.|+.|+-|.+.+.|.|++++.+. +.+.+..+ + .+|... + .
T Consensus 64 ~~~G~g~~~~--~~i~v~kpffv~~-~LP~sv~rGE~~~l~~~V~Ny~~~~~~-v~V~l~~~--~--~~~~~~~~~~~~~ 135 (252)
T 3hrz_B 64 PTKGICVAEP--YEIRVMKVFFIDL-QMPYSVVKNEQVEIRAILHNYVNEDIY-VRVELLYN--P--AFCSASTKGQRYR 135 (252)
T ss_dssp TTTEEEECCC--EEEEBCCSEEEEE-CCCSCEETTCCEEEEEEEEECSSSCEE-EEEEECCC--T--TEEESCCSSCCEE
T ss_pred CCCCeeeccc--eeEEEECCEEEEc-CCCcEEeeCCEEEEEEEEEcccCceEE-EEEEEEcC--C--ceEeecCCCCceE
Confidence 3455544322 2466788888885 999999999999999999999999987 88888766 2 244332 1 3
Q ss_pred eeeeccCCceeeeeeE
Q 015529 383 RIMVTQFGWLIETIFM 398 (405)
Q Consensus 383 ~lg~l~p~~~~~~~~~ 398 (405)
+.-.++++++...-|.
T Consensus 136 ~~v~v~a~~~~~v~f~ 151 (252)
T 3hrz_B 136 QQFPIKALSSRAVPFV 151 (252)
T ss_dssp EEEEECTTEEEEEEEE
T ss_pred EEEEECCCCeEEEEEE
Confidence 4456777776655554
No 8
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=70.67 E-value=15 Score=29.79 Aligned_cols=60 Identities=5% Similarity=-0.092 Sum_probs=46.9
Q ss_pred ecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeE
Q 015529 334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFM 398 (405)
Q Consensus 334 ~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~ 398 (405)
+++...++++|+++++.++|--...+....+.++-..+ +.- --+..+.++|+++...-+-
T Consensus 11 ~v~g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL--~~~---~~~~~~~v~pg~~~~~~~~ 70 (102)
T 2xzz_A 11 TLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGL--QRP---KILNVGDIGGNETVTLRQS 70 (102)
T ss_dssp EESSCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETTT--EEE---EEEEECCBCTTCEEEEEEE
T ss_pred EECCCcccCCeEEEEEEEECCCCCcccCEEEEEECCCC--Ccc---eEEEcCcCCCCCEEEEEEE
Confidence 44666688999999999999999999989999987744 222 3356799999999876553
No 9
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=63.90 E-value=20 Score=38.67 Aligned_cols=74 Identities=14% Similarity=0.219 Sum_probs=60.0
Q ss_pred cccceeeccceEEEEEEecCCCcceeeEEEEEEE---eCCCceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEE
Q 015529 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEI---QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLV 169 (405)
Q Consensus 93 sFG~iylGETFs~yisv~N~s~~~v~~V~ikael---QT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLv 169 (405)
--|..-+|+.+.+.+++.|-.+.++++..+.+|= .-+..++.+. ..+.||+.+...+.+-=+..|.|.|+
T Consensus 593 v~g~~~v~~~~~v~v~f~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~-------~~v~pg~~~~~~~~~~P~~~G~~~L~ 665 (687)
T 2q3z_A 593 ILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIP-------DPVEAGEEVKVRMDLVPLHMGLHKLV 665 (687)
T ss_dssp EESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTTTCSSCEEEEEC-------SCBCTTCEEEEEEEECCCSSSCEEEE
T ss_pred eCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCCCceEEecC-------CCcCCCCEEEEEEEEEeccccceEEE
Confidence 3478889999999999999999999999998872 2222333331 36899999999999999999999998
Q ss_pred EEEE
Q 015529 170 CTAL 173 (405)
Q Consensus 170 c~V~ 173 (405)
+..+
T Consensus 666 a~f~ 669 (687)
T 2q3z_A 666 VNFE 669 (687)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8753
No 10
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=62.23 E-value=22 Score=29.48 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=35.0
Q ss_pred CcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeE
Q 015529 343 KPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFM 398 (405)
Q Consensus 343 ~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~ 398 (405)
+.-+-.++|+|.|++. ++..|+-+ ++-.|+-.=. .|.|+|+++++...+
T Consensus 27 ~~~~~~l~L~N~s~~~---vaFKVKTT--~p~~y~VrP~--~G~i~P~~s~~v~V~ 75 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRK---VCFKVKTT--APRRYCVRPN--SGVIDPGSIVTVSVM 75 (128)
T ss_dssp SCEEEEEEEECCSSSC---EEEEEEES--CGGGEEEESC--EEEECTTCEEEEEEE
T ss_pred ceEEEEEEEECCCCCe---EEEEEECC--CCCceEEeCC--CcEECCCCeEEEEEE
Confidence 4457889999999865 55666666 6666666322 499999999886543
No 11
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=60.19 E-value=21 Score=38.48 Aligned_cols=73 Identities=14% Similarity=0.097 Sum_probs=59.8
Q ss_pred cccceeeccceEEEEEEecCCCcceeeEEEEEEE---eCCCceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEE
Q 015529 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEI---QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLV 169 (405)
Q Consensus 93 sFG~iylGETFs~yisv~N~s~~~v~~V~ikael---QT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLv 169 (405)
--|..-+|+.+.+.+++.|-.+.++++..+.+|= .-...++.+ ..+.||+.+...+.+-=+..|.|.|.
T Consensus 600 v~g~~~v~~~l~v~v~f~NPL~~~L~~c~~~vEG~GL~~~~~~~~~--------~~v~pg~~~~~~~~~~P~~~G~r~L~ 671 (692)
T 1vjj_A 600 VLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDV--------PTLGPKERSRVRFDILPSRSGTKQLL 671 (692)
T ss_dssp ECSCCBTTSCEEEEEEEECCSSSCBCSEEEEEECTTTSSSCEEEEE--------CCBCTTCEEEEEEEECCCSCEEEEEE
T ss_pred eCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCCCceEEEc--------CccCCCCEEEEEEEEEeccccceEEE
Confidence 3488899999999999999999999999998873 212223332 46899999999999999999999998
Q ss_pred EEEE
Q 015529 170 CTAL 173 (405)
Q Consensus 170 c~V~ 173 (405)
+..+
T Consensus 672 a~f~ 675 (692)
T 1vjj_A 672 ADFS 675 (692)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8753
No 12
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=57.52 E-value=23 Score=38.30 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=59.8
Q ss_pred cccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCC--ceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEE
Q 015529 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDK--QRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC 170 (405)
Q Consensus 93 sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s--~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc 170 (405)
--|..-+|+.+.+.+++.|-.+.++++..+.+|=--=. .++. ...+.||+.+...+.+-=+..|.|.|++
T Consensus 636 v~g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~--------~~~v~pg~~~~~~~~~~P~~~G~r~L~a 707 (731)
T 1ex0_A 636 VRGTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKM--------FREIRPNSTVQWEEVCRPWVSGHRKLIA 707 (731)
T ss_dssp EEECCBTTSCEEEEEEEECCSSSCEEEEEEEEEETTTEEEEEEE--------EEEECTTCEEEEEEEECCSSCEEEEEEE
T ss_pred eCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCceeeEe--------cCccCCCCEEEEEEEEEeccccceEEEE
Confidence 34788999999999999999999999999998832211 2332 3468999999999999999999999988
Q ss_pred EEE
Q 015529 171 TAL 173 (405)
Q Consensus 171 ~V~ 173 (405)
..+
T Consensus 708 ~f~ 710 (731)
T 1ex0_A 708 SMS 710 (731)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 13
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=56.86 E-value=27 Score=29.56 Aligned_cols=76 Identities=11% Similarity=0.058 Sum_probs=50.7
Q ss_pred cccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCcee--eccCCCCCCccccCCCCeeeEEEEEeccc--------
Q 015529 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRI--LLLDTSKSPVESIRAGGRYDFIVEHDVKE-------- 162 (405)
Q Consensus 93 sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~--~L~~~~~~~~~~L~pg~~ld~iv~helKE-------- 162 (405)
.||.+..|+.=+..|.+.|.+..+++ ++.......... ...... ..-..|.||++.+..|...+..
T Consensus 35 dFG~v~~~~~~~~~l~I~Ntg~vpa~---F~f~~~~~~~~~~~~wl~v~-P~~G~L~Pge~~~I~v~~~v~~~~~~~ln~ 110 (140)
T 3qbt_B 35 VFENVKFRQLQKEKFQISNNGQVPCH---FSFIPKLNDSQYCKPWLRAE-PFEGYLEPNETVDISLDVYVSKDSVTILNS 110 (140)
T ss_dssp EEEEECBTCCEEEEEEEEECSSSCEE---EEEECCTTCSSSSCTTEEEE-SCEEEECTTCEEEEEEEECBCHHHHHHHHH
T ss_pred EeeeceeeeeeeeEEEEEcCCccceE---EEEecCCCchhhhhHhhhcC-CcccccCCCCeeEEEEEEEEccCccccccc
Confidence 69999999999999999999887765 333322111100 000101 1235899999999999998744
Q ss_pred ---cCceEEEEEE
Q 015529 163 ---LGAHTLVCTA 172 (405)
Q Consensus 163 ---~G~HiLvc~V 172 (405)
.=..+|+|.|
T Consensus 111 g~~~l~diLvL~V 123 (140)
T 3qbt_B 111 GEDKIEDILVLHL 123 (140)
T ss_dssp SSSCSCEEEEEEE
T ss_pred chhhhheeEEEEe
Confidence 2245888887
No 14
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=56.49 E-value=19 Score=29.95 Aligned_cols=43 Identities=16% Similarity=0.177 Sum_probs=37.0
Q ss_pred CCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecC
Q 015529 325 SKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQN 369 (405)
Q Consensus 325 ~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~ 369 (405)
.+++-+.+ ++|-+|.-|+-|.+...|.|+-+..|. +.+.+..+
T Consensus 5 ~k~~~~~l-~lPysv~rgE~~~~~~~V~nyl~~~~~-v~v~L~~s 47 (118)
T 3es6_B 5 RKIIIKNF-DIPKSVRPNDEVTAVLAVQTELKECMV-VKTYLISS 47 (118)
T ss_dssp CCCCEECC-CCCSEECSSCCEEEEEEEEECCSSCEE-EEEEEEES
T ss_pred cceEEEEe-eCCceEecCCEEEEEEEEEecccceEE-EEEEecCC
Confidence 46666664 799999999999999999999999997 88888765
No 15
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=53.19 E-value=27 Score=29.82 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=34.5
Q ss_pred CcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeE
Q 015529 343 KPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFM 398 (405)
Q Consensus 343 ~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~ 398 (405)
+..+-.++|+|.+++. ++..|+-+ ++-.||-.=. .|.|+|+.+++...+
T Consensus 31 ~~~~~~l~L~N~s~~~---VaFKVKTT--~p~~y~VrP~--~GiI~P~~s~~v~V~ 79 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRK---VCFKVKTT--APRRYCVRPN--SGIIDPGSIVTVSVM 79 (147)
T ss_dssp SCCCEEEEEECCSSSC---EEEEEEES--CTTSEEEESS--EEECCTTCEEEEEEE
T ss_pred ceEEEEEEEECCCCCc---EEEEEECC--CCccEEEcCC--CcEECCCCeEEEEEE
Confidence 3445789999999865 55666666 6666666322 499999999886544
No 16
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=52.85 E-value=90 Score=26.00 Aligned_cols=92 Identities=16% Similarity=0.111 Sum_probs=51.7
Q ss_pred eccceEEEEEEecCCCcceeeE-----EEEEEEeCC-Cceeec-cCCC----CCCccccCCCCeeeEEEEEe-ccccCce
Q 015529 99 LGETFCSYISINNSSTLEVRDV-----VIKAEIQTD-KQRILL-LDTS----KSPVESIRAGGRYDFIVEHD-VKELGAH 166 (405)
Q Consensus 99 lGETFs~yisv~N~s~~~v~~V-----~ikaelQT~-s~r~~L-~~~~----~~~~~~L~pg~~ld~iv~he-lKE~G~H 166 (405)
.|+.....|.+.|.++.++.-- +....+... ..++-- ++.. .-....|+||++..+-...+ .-++|.|
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Y 95 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTY 95 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccE
Confidence 6889999999999988765311 111122221 112211 1100 00135699999988777777 3467999
Q ss_pred EEEEEEEEEcCCCcccccceeeeEEe
Q 015529 167 TLVCTALYSDGEGERKYLPQFFKFIV 192 (405)
Q Consensus 167 iLvc~V~Y~~~~Ge~~~frK~fkF~v 192 (405)
+|.+.. .-..-+.+.++--=+|+|
T Consensus 96 tl~a~l--~~~~~~~~~~~~~~~~~~ 119 (120)
T 3isy_A 96 EVKVTF--KGRAENLKQVQAVQQFEV 119 (120)
T ss_dssp EEEEEE--CCEETTCCCCEEEEEEEE
T ss_pred EEEEEE--EeeeccceeeeeeeEEEe
Confidence 998763 211122355555555655
No 17
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=51.35 E-value=14 Score=39.70 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=45.2
Q ss_pred CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceee-e------eccCCce
Q 015529 326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRI-M------VTQFGWL 392 (405)
Q Consensus 326 ~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~l-g------~l~p~~~ 392 (405)
.++.+.+. ..+.+.+|++|.+.+.++|.|++.-. +.+.+.-. .+.|+|..+-.+ . .|+|+..
T Consensus 471 ~~v~~~~~-~~~~~~~G~df~v~v~~~N~s~~~~~-v~~~l~a~---~v~YtG~~~~~~~~~~~~~~~l~p~~~ 539 (687)
T 2q3z_A 471 TGMAMRIR-VGQSMNMGSDFDVFAHITNNTAEEYV-CRLLLCAR---TVSYNGILGPECGTKYLLNLTLEPFSE 539 (687)
T ss_dssp -CEEEEEE-CCSCCBTTCCEEEEEEEEECSSSCEE-EEEEEEEE---EECTTCCEEEEEEEEEEEEEEECTTEE
T ss_pred CceEEEEE-eCCCCcCCCCEEEEEEEEECCCCCEE-EEEEEEEE---EEeeCCcccceEeeeeeeEEEECCCce
Confidence 45777764 67788899999999999999887764 66665432 378888887777 2 3666654
No 18
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=51.31 E-value=32 Score=37.05 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=59.3
Q ss_pred ccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCC--ceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEE
Q 015529 94 FGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDK--QRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCT 171 (405)
Q Consensus 94 FG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s--~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~ 171 (405)
-|..-+|+.+.+.+++.|-.+.++++..+.+|=--=. .++.+ ...+.||+.+...+.+-=+..|.+.|++.
T Consensus 592 ~g~~~v~~~l~a~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~~-------~~~v~Pg~~~~~~~~~~P~~~G~r~L~a~ 664 (695)
T 1g0d_A 592 PGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLSATQIHV-------NGAVAPSGKVSVKLSFSPMRTGVRKLLVD 664 (695)
T ss_dssp CSCEETTCCEEEEEEEECCSSSCEESCEEEEEETTTEEEEEEEC-------SSEECTTCEEEEEEEECCSSCEEEEEEEE
T ss_pred CCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCcceEEec-------CCCcCCCCEEEEEEEEEcCCccceEEEEE
Confidence 4888999999999999999999999999998832211 22322 14689999999999999999999999877
Q ss_pred EE
Q 015529 172 AL 173 (405)
Q Consensus 172 V~ 173 (405)
.+
T Consensus 665 f~ 666 (695)
T 1g0d_A 665 FD 666 (695)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 19
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=50.89 E-value=10 Score=40.83 Aligned_cols=64 Identities=11% Similarity=-0.053 Sum_probs=46.6
Q ss_pred cCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeee------ccCCce
Q 015529 324 TSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMV------TQFGWL 392 (405)
Q Consensus 324 ~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~------l~p~~~ 392 (405)
...++.+.+. .++.+.+|++|.+.+.++|.|++.-. +.+.+.-. .+.|+|..+-.++. |+|+..
T Consensus 478 ~~~~v~~~~~-~~~~~~~G~df~v~l~~~N~s~~~~~-v~~~l~a~---~v~YtG~~~~~~~~~~~~v~L~p~~~ 547 (692)
T 1vjj_A 478 QEPSIIGKLK-VAGMLAVGKEVNLVLLLKNLSRDTKT-VTVNMTAW---TIIYNGTLVHEVWKDSATMSLDPEEE 547 (692)
T ss_dssp -CCSEEEEEE-ECSCCBTTSCEEEEEEEEECSSSCEE-EEEEEEEE---EECTTCCEEEEEEEEEEEEEECTTCE
T ss_pred cCCCeEEEEE-cCCCCCCCCCEEEEEEEEECCCCCEE-EEEEEEEE---EEeeCCccccceEEeeEEEEECCCce
Confidence 3567888864 77788899999999999999887754 66655432 37888877777764 556654
No 20
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=49.98 E-value=96 Score=25.89 Aligned_cols=73 Identities=10% Similarity=0.042 Sum_probs=56.0
Q ss_pred ceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEEEEEE
Q 015529 96 AIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYS 175 (405)
Q Consensus 96 ~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~V~Y~ 175 (405)
.+..|++-...+.|.|.....+.+..++.-+ ....+ .. ..+ .|++|++-.+.+.+.-+..|.|.|...|.+.
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyv--ng~~v---~t--~~v-~La~G~s~tv~f~~~~~~~G~~~v~AvVD~~ 99 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKVRVYI--NGTLY---KN--WTV-SLGPKEEKVLTFNWTPTQEGMYRINATVDEE 99 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEEEEEE--TTEEE---EE--EEE-EECTTCEEEEEEEECCSSCEEEEEEEEESTT
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEEEEEE--CCEEE---ee--EEe-ccCCCCeEEEEEEEEcCCCcEEEEEEEEcCC
Confidence 6788999999999999999999887666544 33222 11 123 5999999888888888889999999888654
Q ss_pred c
Q 015529 176 D 176 (405)
Q Consensus 176 ~ 176 (405)
.
T Consensus 100 n 100 (127)
T 3idu_A 100 N 100 (127)
T ss_dssp C
T ss_pred C
Confidence 3
No 21
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=49.30 E-value=27 Score=35.07 Aligned_cols=30 Identities=30% Similarity=0.400 Sum_probs=26.4
Q ss_pred eeeccceEEEEEEecCCCcceeeEEEEEEE
Q 015529 97 IYLGETFCSYISINNSSTLEVRDVVIKAEI 126 (405)
Q Consensus 97 iylGETFs~yisv~N~s~~~v~~V~ikael 126 (405)
-|-||+....+.|.|.|+..|+.+.+++..
T Consensus 205 Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q 234 (392)
T 1suj_A 205 YYHGEPINVNVKINNTTGKIVKKIKIIVEQ 234 (392)
T ss_dssp EETTCCEEEEEEEEECSSSEEEEEEEEEEE
T ss_pred ccCCCEEEEEEEEECCCCCcEeEEEEEEEE
Confidence 367999999999999999999998887754
No 22
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=49.27 E-value=49 Score=33.02 Aligned_cols=72 Identities=13% Similarity=0.160 Sum_probs=50.0
Q ss_pred cCCCeEEEEEecCc-eeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCC------eeEEEE-cceee-eeccCCceee
Q 015529 324 TSKEIELNVVEVPS-VVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDE------EKVVMI-NGLRI-MVTQFGWLIE 394 (405)
Q Consensus 324 ~~~dl~l~v~~~P~-~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~------~~~~~~-~~~~l-g~l~p~~~~~ 394 (405)
..+.|.+.+ .+|. .+.-||+..+++.|.|+|.+++..+.+.|.+- .. =.|... ..... ..+.||++..
T Consensus 209 ssGpl~L~v-sLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~--~~v~l~s~~~y~~~Va~~E~~epV~pgst~~ 285 (380)
T 3ugu_A 209 SDKPLRLAV-SLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQV--TNVVLYSSDYYIKTVAAEEAQEKVPPNSSLT 285 (380)
T ss_dssp CCCEEEEEE-EESCSEEETTCCEEEEEEEEECSSSCEEEEEEEEEEE--EEECSSSCCEEEEEEEEEECSCCBCTTEEEE
T ss_pred cCCCEEEEE-EeCCccCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEE--EEEEEecCCeEEEEEEEeccCCcCCCCCeEE
Confidence 577888885 5664 77889999999999999999998788888775 11 112111 21221 1678998877
Q ss_pred eeeE
Q 015529 395 TIFM 398 (405)
Q Consensus 395 ~~~~ 398 (405)
-++.
T Consensus 286 k~~~ 289 (380)
T 3ugu_A 286 KTLT 289 (380)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 6664
No 23
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=44.13 E-value=66 Score=26.62 Aligned_cols=46 Identities=13% Similarity=0.113 Sum_probs=32.1
Q ss_pred EEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeee
Q 015529 345 FLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIF 397 (405)
Q Consensus 345 F~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~ 397 (405)
.+-.++|+|.|++.+. +.| .-+ ++-.||.-- ..|.|+|+.+++...
T Consensus 27 ~~~~l~l~N~s~~~va-FKV--KTT--~p~~y~VrP--~~Gii~P~~s~~v~V 72 (126)
T 1msp_A 27 HTYHIKITNAGGRRIG-WAI--KTT--NMRRLSVDP--PCGVLDPKEKVLMAV 72 (126)
T ss_dssp CCEEEEEEECSSSCEE-EEE--EES--CTTTEEEES--CEEEECTTCEEEEEE
T ss_pred eEEEEEEECCCCCeEE-EEE--EcC--CCCcEEEEC--CCeEECCCCEEEEEE
Confidence 4568899999998864 554 444 555666522 269999999887543
No 24
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=43.77 E-value=82 Score=28.25 Aligned_cols=78 Identities=18% Similarity=0.204 Sum_probs=55.1
Q ss_pred ccccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEecccc-Cc----e
Q 015529 92 QAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKEL-GA----H 166 (405)
Q Consensus 92 ~sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~-G~----H 166 (405)
-.||.+- |+.-...+.+.|..+.++.--.+ ++.-......- . -..++||++.+..|.|+-+.. |. +
T Consensus 126 ~dfG~i~-g~~~~~~f~i~N~G~~pL~I~~v----~~scgct~~~~-~---~~~i~PGe~~~i~v~~~~~~~~g~~~~~~ 196 (220)
T 2qsv_A 126 LDMGQLD-GETTKAAIEIRNVGAGPLRLHSV----TTRNPALTAVP-D---RTEIKPGGSTLLRIAVDPQVMKAEGWQSI 196 (220)
T ss_dssp EEEEECT-TSCEEEEEEEEECSSSCEEEEEE----EECSTTEEEEE-S---CSEECTTCEEEEEEEECHHHHHHTTCSEE
T ss_pred EeeeccC-CCeEEEEEEEEECCCCCEEEEEE----EeCCCCEeeec-C---CccCCCCCEEEEEEEEecCCCCCccccee
Confidence 3799999 99999999999999887764433 33322222210 1 135899999999999999988 88 7
Q ss_pred EEEEEEEEEcCC
Q 015529 167 TLVCTALYSDGE 178 (405)
Q Consensus 167 iLvc~V~Y~~~~ 178 (405)
.-..+|.-.+++
T Consensus 197 ~~~i~v~~N~~~ 208 (220)
T 2qsv_A 197 AADISIICNDPQ 208 (220)
T ss_dssp EEEEEEEESCTT
T ss_pred ccEEEEEECCCC
Confidence 777777333343
No 25
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=43.14 E-value=1.4e+02 Score=24.52 Aligned_cols=69 Identities=13% Similarity=0.171 Sum_probs=48.8
Q ss_pred CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeEEEE
Q 015529 326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWIS 401 (405)
Q Consensus 326 ~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~~~~ 401 (405)
.||.+.-. .|+.+..+++.+|...|.|.-...-..+.+.+.-+ .. -+.....+.|.+|.+..--|-|..
T Consensus 3 PDL~vt~i-tP~~~~~~~~~ti~atVkN~G~~~a~~~~V~ly~~--g~----~v~t~~v~~LaaG~s~tv~~~w~~ 71 (114)
T 2l0d_A 3 PDLVPVSL-TPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVD--GI----VVDTQTVTSLESENSTNVDFHWTL 71 (114)
T ss_dssp CCEEEEEE-ECSEECTTSEEEEEEEEEECSSSCBCCEEEEEEET--TE----EEEEEEESCBCBTCEEEEEEEEEC
T ss_pred CCcEEEec-cCCCcCCCCeEEEEEEEEECCCCCCCCEEEEEEEC--CE----EEcceecccccCCCEEEEEEEEee
Confidence 45655544 58889999999999999999665544566666544 11 123335667999999888888964
No 26
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=41.31 E-value=49 Score=26.82 Aligned_cols=64 Identities=13% Similarity=0.129 Sum_probs=43.7
Q ss_pred cceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEEE
Q 015529 95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA 172 (405)
Q Consensus 95 G~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~V 172 (405)
+.+.+|+..+..|...+... .++|++..|+.+..- . .+...+.=...|+|-.+|.|.|.+.+.+
T Consensus 22 ~~~~vg~~~~F~V~~~~a~g------~l~v~V~~P~g~~~~-----~---~v~d~~~gty~v~ytP~~~G~h~v~V~~ 85 (112)
T 2d7p_A 22 TGLKVNQPASFAVQLNGARG------VIDARVHTPSGAVEE-----C---YVSELDSDKHTIRFIPHENGVHSIDVKF 85 (112)
T ss_dssp BCCCTTCCEEEEEECTTCCS------CEEEEEECSSSCBCC-----C---EECSCBTTEEEEEECCSSCEEEEEEEEE
T ss_pred CCcccCCcEEEEEEeCCCCC------CEEEEEECCCCCeee-----e---EEEeCCCCeEEEEEEcCCCEeEEEEEEE
Confidence 35789999999998877632 678888888754211 0 1122222246899999999999988764
No 27
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=40.15 E-value=18 Score=38.99 Aligned_cols=62 Identities=6% Similarity=0.017 Sum_probs=43.1
Q ss_pred CCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeee------ccCCce
Q 015529 325 SKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMV------TQFGWL 392 (405)
Q Consensus 325 ~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~------l~p~~~ 392 (405)
..++++.+. ..+.+ +|++|.+.+.++|.|++.-. +.+.+.-. .+.|+|..+-.+++ |+|+..
T Consensus 470 ~~~v~~~i~-~~~~~-~G~df~v~v~~~N~s~~~~~-v~~~l~a~---~v~YtG~~~~~~~~~~~~~~L~p~~~ 537 (695)
T 1g0d_A 470 QGRLQLSIK-HAQPV-FGTDFDVIVEVKNEGGRDAH-AQLTMLAM---AVTYNSLRRGECQRKTISVTVPAHKA 537 (695)
T ss_dssp --CEEEEEE-ECCCB-TTCCEEEEEEEEECSSSCEE-EEEEEEEE---EECTTCBCCCCCCEEEEEEEECTTEE
T ss_pred CCCeEEEEE-eCCCC-CCCCEEEEEEEEECCCCCEE-EEEEEEEE---EEeeCCcccCceeEeeEEEEECCCce
Confidence 456888875 45555 99999999999999887754 66655432 37888877766654 556543
No 28
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=38.82 E-value=50 Score=28.38 Aligned_cols=46 Identities=20% Similarity=0.058 Sum_probs=33.7
Q ss_pred EEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeE
Q 015529 346 LLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFM 398 (405)
Q Consensus 346 ~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~ 398 (405)
+-.++|+|.+++. ++..|+-+ ++-.||-.= ..|.|+|+.+++-..+
T Consensus 38 ~~~l~L~N~s~~~---VaFKVKTT--~p~~y~VrP--~~GiI~P~~s~~V~V~ 83 (152)
T 1wic_A 38 KTLIVLTNVTKNI---VAFKVRTT--APEKYRVKP--SNSSCDPGASIDIIVS 83 (152)
T ss_dssp CEEEEEEBCSSSC---EEEEEEES--CTTTEEEES--SEEEECTTCEEEEEEE
T ss_pred EEEEEEEcCCCCe---EEEEEECC--CCCceeecC--CCcEECCCCeEEEEEE
Confidence 5789999999865 55666666 666676632 4599999999986544
No 29
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=38.56 E-value=1.6e+02 Score=24.06 Aligned_cols=72 Identities=11% Similarity=0.084 Sum_probs=49.5
Q ss_pred eeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEecc-ccCceEEEEEEEEE
Q 015529 97 IYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVK-ELGAHTLVCTALYS 175 (405)
Q Consensus 97 iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helK-E~G~HiLvc~V~Y~ 175 (405)
.+.|+.-.....|.|..........++.-+ ....+ . ..++..|++|.+-...+.+.-+ +.|.|.|...|...
T Consensus 15 ~~~~~~~ti~atVkN~G~~~a~~~~V~ly~--~g~~v---~--t~~v~~LaaG~s~tv~~~w~~~~~~G~ytl~a~VD~~ 87 (114)
T 2l0d_A 15 VVPNTVNTMTATIENQGNKDSTSFNVSLLV--DGIVV---D--TQTVTSLESENSTNVDFHWTLDGTANSYTLTVNVDPE 87 (114)
T ss_dssp ECTTSEEEEEEEEEECSSSCBCCEEEEEEE--TTEEE---E--EEEESCBCBTCEEEEEEEEECCCSCSEEEEEEEECTT
T ss_pred cCCCCeEEEEEEEEECCCCCCCCEEEEEEE--CCEEE---c--ceecccccCCCEEEEEEEEeecCcCceEEEEEEECCC
Confidence 889999999999999977665554444322 22211 1 1235579999987766677766 68999999888544
No 30
>2icn_B Prolactin-inducible protein; beta-pleated sheet, complex, seminal fluid; HET: NAG BMA MAN P6G; 3.23A {Homo sapiens} PDB: 3es6_B*
Probab=36.94 E-value=50 Score=27.52 Aligned_cols=35 Identities=11% Similarity=0.185 Sum_probs=31.8
Q ss_pred ecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecC
Q 015529 334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQN 369 (405)
Q Consensus 334 ~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~ 369 (405)
.+|.+|+-|+-|++++.|.|+-++-|. +.+.+..+
T Consensus 13 tlPySv~rgE~f~lkatVfNyL~~Ci~-V~v~L~~S 47 (118)
T 2icn_B 13 DIPKSVRPNDEVTAVLAVQTELKECMV-VKTYLISS 47 (118)
T ss_dssp CCCSEECSSCCEEEEEEEEECCSSCEE-EEEEEEES
T ss_pred eCCCcccCCCEEEEEEEEEeccCcCEE-EEEEEcCC
Confidence 579999999999999999999999996 88888876
No 31
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=35.58 E-value=1.3e+02 Score=27.68 Aligned_cols=79 Identities=15% Similarity=0.074 Sum_probs=46.5
Q ss_pred ccccccccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCC---CccccCCCCeeeEEEEEeccccC
Q 015529 88 LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKS---PVESIRAGGRYDFIVEHDVKELG 164 (405)
Q Consensus 88 L~LP~sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~---~~~~L~pg~~ld~iv~helKE~G 164 (405)
++||.++ --||.|.--..+.|..+.. +.++|.|..... +.+...... ....+.+++.-..-..-.-+++|
T Consensus 86 ~~LP~sv---~rGE~~~l~~~V~Ny~~~~---~~v~V~l~~~~~-~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G 158 (252)
T 3hrz_B 86 LQMPYSV---VKNEQVEIRAILHNYVNED---IYVRVELLYNPA-FCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQG 158 (252)
T ss_dssp ECCCSCE---ETTCCEEEEEEEEECSSSC---EEEEEEECCCTT-EEESCCSSCCEEEEEEECTTEEEEEEEEEEECSSE
T ss_pred cCCCcEE---eeCCEEEEEEEEEcccCce---EEEEEEEEcCCc-eEeecCCCCceEEEEEECCCCeEEEEEEEEeccCC
Confidence 6888875 4799999999999998765 445566654332 221111100 11345666533222222347889
Q ss_pred ceEEEEEEE
Q 015529 165 AHTLVCTAL 173 (405)
Q Consensus 165 ~HiLvc~V~ 173 (405)
.|.+.+++.
T Consensus 159 ~~~i~v~A~ 167 (252)
T 3hrz_B 159 LHDVEIKAS 167 (252)
T ss_dssp EEEEEEEEE
T ss_pred cEEEEEEEE
Confidence 988877764
No 32
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=34.65 E-value=68 Score=34.31 Aligned_cols=73 Identities=18% Similarity=0.129 Sum_probs=52.0
Q ss_pred cCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcc-eeeeeccCCceeeeeeE
Q 015529 322 TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMING-LRIMVTQFGWLIETIFM 398 (405)
Q Consensus 322 ~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~-~~lg~l~p~~~~~~~~~ 398 (405)
....+++-+.+ ++|-.|..|+-|.+.+.|.|+++..+. +.|.+... +++...+..+ .+--.++++++...-|.
T Consensus 148 ~~v~kpf~v~~-~lP~~v~~GD~~~i~~~V~N~~~~~~~-v~v~l~~~--~~~~~~~~~~~~~~~~v~a~~~~~v~f~ 221 (767)
T 4fxk_B 148 LRVFREFHLHL-RLPMSVRRFEQLELRPVLYNYLDKNLT-VSVHVSPV--EGLCLAGGGGLAQQVLVPAGSARPVAFS 221 (767)
T ss_dssp EECCCSEEEEC-CCCSCEETTCEEEECCEEEECSSSCEE-EEEEECCC--TTEECSSSSCCCEEEEECSSCEEECCEE
T ss_pred EEEeccEEEec-CCCCeeccCCEEEEEEEEEECCCCCEE-EEEEEEec--CCeEEecCCceeEEEEEcCCCeEEEEEE
Confidence 45678888874 899999999999999999999999986 88888765 3332222111 23345677766655444
No 33
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=33.67 E-value=3.3e+02 Score=31.63 Aligned_cols=73 Identities=12% Similarity=-0.007 Sum_probs=53.9
Q ss_pred ccCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEE-cceeeeeccCCceeeeee
Q 015529 321 TTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMI-NGLRIMVTQFGWLIETIF 397 (405)
Q Consensus 321 ~~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~-~~~~lg~l~p~~~~~~~~ 397 (405)
.....+++-+.+ ++|-.+.-|+-|.+.+.|.|+++..+. +.|.+..+ +.+...+. ...+--.|+++++...-|
T Consensus 762 ~v~v~kpf~v~~-~LP~sv~rGE~~~l~~~V~N~~~~~~~-v~V~l~~~--~~~~~~~~~~~~~~v~l~~~~~~~v~f 835 (1451)
T 4acq_A 762 SLRAFQPFFVEL-TMPYSVIRGEAFTLKATVLNYLPKCIR-VSVQLEAS--PAFLAVPVEKEQAPHCICANGRQTVSW 835 (1451)
T ss_dssp EECCBCSEEEEE-ECCSEEESSSCEEEEEEEEECSSSCEE-EEEEECCC--TTEEEEESCSCCCCEEECTTEEEEEEE
T ss_pred EEEEECCEEEEc-cCCceEecCCEEEEEEEEEeccCccEE-EEEEEEcC--CCeEeecCCCCceEEEECCCCeEEEEE
Confidence 456678888885 899999999999999999999999986 88888766 33443332 124556678877655444
No 34
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=32.31 E-value=1.2e+02 Score=34.52 Aligned_cols=74 Identities=12% Similarity=0.061 Sum_probs=51.3
Q ss_pred cCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEc-----ceeeeeccCCceeeee
Q 015529 322 TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMIN-----GLRIMVTQFGWLIETI 396 (405)
Q Consensus 322 ~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~-----~~~lg~l~p~~~~~~~ 396 (405)
....+++-+.+ ++|-.+..|+-|.+.+.|.|+++..+. +.+.+..++ +.+.+++-. ..+--.++++++...-
T Consensus 660 ~~v~kp~~v~~-~lP~~v~~Gd~~~l~~~v~N~~~~~~~-v~v~l~~~~-~~~~~~~~~~~~~~~~~~v~v~~~~~~~v~ 736 (1325)
T 2pn5_A 660 FTTVQPFYIVE-NLPYSIKRGEAVVLQFTLFNNLGAEYI-ADVTLYNVA-NQTEFVGRPNTDLSYTKSVSVPPKVGVPIS 736 (1325)
T ss_dssp EEECCSEEEEE-ECCSEEETTCEEEEEEEEEECSSSCEE-EEEEEECGG-GCEEETTSCTTCCEEEEEEEECTTCCEEEE
T ss_pred EEEeeeEEEEc-CCCcEEEcCCEEEEEEEEEeCCCCcEE-EEEEEeecC-CceEEeccCCCCCcceEEEEECCCCeEEEE
Confidence 35567777774 799999999999999999999999987 888886541 114444321 1233456777665544
Q ss_pred eE
Q 015529 397 FM 398 (405)
Q Consensus 397 ~~ 398 (405)
|.
T Consensus 737 f~ 738 (1325)
T 2pn5_A 737 FL 738 (1325)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 35
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=31.94 E-value=11 Score=29.66 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=31.1
Q ss_pred ccCCCCeeeEEEEEeccccCceEEEEEEEEEcCCCccccc--ceeeeEEeeCCeEEeEEEEEeCCe--eEEEEEEE
Q 015529 145 SIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYL--PQFFKFIVSNPLSVRTKVRVVKEI--TFLEACIE 216 (405)
Q Consensus 145 ~L~pg~~ld~iv~helKE~G~HiLvc~V~Y~~~~Ge~~~f--rK~fkF~v~~PL~VkTK~~~~~~~--~~LEaqlq 216 (405)
.++||+.+....|+ -.+.-.+++.++...+..+|..+.+ +.= -.+.-|..+++.+.|..+. .|+|+|++
T Consensus 23 ~i~PG~~~~~H~H~-~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G--~~~~ip~G~~H~~~N~g~~pl~~IeVE~K 95 (98)
T 3lag_A 23 RLPPGSATGHHTHG-MDYVVVPMADGEMTIVAPDGTRSLAQLKTG--RSYARKAGVQHDVRNESTAEIVFLEIELK 95 (98)
T ss_dssp EECTTEECCSEECC-SCEEEEESSCBC-CEECTTSCEECCCBCTT--CCEEECTTCEEEEBCCSSSCEEEEEEEEC
T ss_pred EECCCCccCcEECC-CcEEEEEEeccEEEEEeCCCceEEEEecCC--cEEEEcCCCcEECEECCCCeEEEEEEEEc
Confidence 56788877655443 2223333333333334444432211 110 0111355566666665443 56666664
No 36
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=31.18 E-value=1.4e+02 Score=24.09 Aligned_cols=44 Identities=7% Similarity=-0.025 Sum_probs=32.0
Q ss_pred EEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeee
Q 015529 346 LLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETI 396 (405)
Q Consensus 346 ~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~ 396 (405)
...++|+|.|++.+ +..|+-+ ++..||--- ..|.++||++.+-.
T Consensus 18 ~~~l~L~N~t~~~v---aFKVKtT--~p~~y~VrP--~~G~I~P~~~~~i~ 61 (109)
T 1row_A 18 SSTHKLVNGGAEKI---VFKIKSS--NNNEYRIAP--VFGFVDPSGSKDVV 61 (109)
T ss_dssp EEEEEEEECSSSCE---EEEEEES--CSSSEEEEC--SEEEECTTEEEEEE
T ss_pred eEEEEEEcCCCCeE---EEEEEeC--CCCceEEcC--CceEECCCCeEEEE
Confidence 57899999999875 4455555 567787632 35999999998854
No 37
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=30.48 E-value=2e+02 Score=31.49 Aligned_cols=72 Identities=10% Similarity=0.110 Sum_probs=51.9
Q ss_pred ccCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCC-CceecEEEEEecCCCCCeeEEEEc-----ceeeeeccCCceee
Q 015529 321 TTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD-KEQGPFEIWLSQNDSDEEKVVMIN-----GLRIMVTQFGWLIE 394 (405)
Q Consensus 321 ~~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~-r~m~~l~l~v~~~~~~~~~~~~~~-----~~~lg~l~p~~~~~ 394 (405)
.....+++-+.+ ++|-.|..|+-|.+.+.|.|+++ ..+. +.|.+..+ ++ +|... ..+.-.|+++++..
T Consensus 74 ~~~v~kp~~v~~-~LP~~v~~GD~~~i~~~v~N~~~~~~~~-v~v~l~~~--~~--~~~~~~~~~~~~~~v~l~~~~~~~ 147 (915)
T 2hr0_B 74 EVTVMQDFFIDL-RLPYSVVRNEQVEIRAVLYNYRQNQELK-VRVELLHN--PA--FCSLATTKRRHQQTVTIPPKSSLS 147 (915)
T ss_dssp EEEECCSSEEEE-ECCSEEETTCCEEEEEEEEECCSSCCEE-EEEEECCC--TT--EECSCCSSSCEEEEEEECTTEEEE
T ss_pred eEEEeccEEEEc-cCCCEEecCcEEEEEEEEEcCCCCeeEE-EEEEEecC--Cc--eEeecCCCCcceeEEEECCCCeEE
Confidence 456678888884 89999999999999999999999 9886 88888765 22 23221 12444567776655
Q ss_pred eeeE
Q 015529 395 TIFM 398 (405)
Q Consensus 395 ~~~~ 398 (405)
.-|.
T Consensus 148 v~f~ 151 (915)
T 2hr0_B 148 VPYV 151 (915)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 38
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=28.67 E-value=51 Score=32.93 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=26.2
Q ss_pred eeeccceEEEEEEecCCCcceeeEEEEEE
Q 015529 97 IYLGETFCSYISINNSSTLEVRDVVIKAE 125 (405)
Q Consensus 97 iylGETFs~yisv~N~s~~~v~~V~ikae 125 (405)
-|-||+....++|+|.|+..|+.|.+++.
T Consensus 224 Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~ 252 (380)
T 3ugu_A 224 YYHGEPIPVTVAVTNSTEKTVKKIKVLVE 252 (380)
T ss_dssp EETTCCEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CcCCCEEEEEEEEEcCCCCeEeEEEEEEE
Confidence 47799999999999999999999988764
No 39
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=28.05 E-value=1e+02 Score=25.86 Aligned_cols=58 Identities=12% Similarity=-0.023 Sum_probs=40.9
Q ss_pred eeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCC-eeEEEEcceeeeeccCCceeeeee
Q 015529 338 VVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDE-EKVVMINGLRIMVTQFGWLIETIF 397 (405)
Q Consensus 338 ~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~-~~~~~~~~~~lg~l~p~~~~~~~~ 397 (405)
.|+.+++-+-++.|+|.+.-+.. +.+..+.++... -.|.-++ -.-|.|+|+.+.+.-+
T Consensus 38 ~v~~~~~~~~~l~I~Ntg~vpa~-F~f~~~~~~~~~~~~wl~v~-P~~G~L~Pge~~~I~v 96 (140)
T 3qbt_B 38 NVKFRQLQKEKFQISNNGQVPCH-FSFIPKLNDSQYCKPWLRAE-PFEGYLEPNETVDISL 96 (140)
T ss_dssp EECBTCCEEEEEEEEECSSSCEE-EEEECCTTCSSSSCTTEEEE-SCEEEECTTCEEEEEE
T ss_pred eceeeeeeeeEEEEEcCCccceE-EEEecCCCchhhhhHhhhcC-CcccccCCCCeeEEEE
Confidence 46788999999999999999887 777765443222 1233332 3479999999987543
No 40
>3hs8_A Adaptor protein complex AP-2, alpha 2 subunit; adaptor complex AP-2, endocytosis, cell membrane, coated PIT binding, membrane, disease mutation; 1.90A {Mus musculus}
Probab=27.28 E-value=1.1e+02 Score=28.77 Aligned_cols=76 Identities=9% Similarity=0.046 Sum_probs=56.2
Q ss_pred eeeccceEEEEEEecCCCcceeeEEEEEEEeCCCc---eeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEEEE
Q 015529 97 IYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQ---RILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTAL 173 (405)
Q Consensus 97 iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~---r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~V~ 173 (405)
-|-|...+..+-+.|-++.+++++.+.+ ..+.. .+.+ ..... ...|+||+..+..+..+++..=.......++
T Consensus 64 e~~~~~g~i~L~~gNKs~~~it~f~~~i--~~~~~~~~~l~~-~~~~~-~~tI~p~~q~qq~i~v~~~~pF~~~P~l~is 139 (273)
T 3hs8_A 64 EFRQNLGRMFIFYGNKTSTQFLNFTPTL--ICADDLQTNLNL-QTKPV-DPTVDGGAQVQQVVNIECISDFTEAPVLNIQ 139 (273)
T ss_dssp EEETTEEEEEEEEEECSSSCBBSCCCEE--ECCTTHHHHEEE-EECCC-CSCBCTTCEEEEEEEEEECSCCCCCCEEEEE
T ss_pred EEeCceEEEEEEEEcCCCCcceeEEEEE--ECCCCCCcceEE-EecCC-CCeECCCCEEEEEEEEEEcccccCCCEEEEE
Confidence 5778889999999999999999987744 44431 1221 11112 2689999999999999999876667788888
Q ss_pred EEc
Q 015529 174 YSD 176 (405)
Q Consensus 174 Y~~ 176 (405)
|..
T Consensus 140 f~~ 142 (273)
T 3hs8_A 140 FRY 142 (273)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 41
>3nrf_A APAG protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 1.50A {Pseudomonas aeruginosa} PDB: 3sb3_A
Probab=27.07 E-value=1.9e+02 Score=23.61 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=39.4
Q ss_pred EEEEEEEeCCCCceec--EEEEEecCCCCCeeEEEEcceee-eeccCCceeeeeeEEEE
Q 015529 346 LLKLKLTNQTDKEQGP--FEIWLSQNDSDEEKVVMINGLRI-MVTQFGWLIETIFMWIS 401 (405)
Q Consensus 346 ~~~~~v~N~s~r~m~~--l~l~v~~~~~~~~~~~~~~~~~l-g~l~p~~~~~~~~~~~~ 401 (405)
+|.+.|.|.++..++. +=+.+-..+-..+..=++..-.. |.|.||.+++.+.++.|
T Consensus 30 tFdV~vaNl~~~~idLsk~C~~a~~~~gkef~ldTVde~L~~g~lk~g~~vkG~avFaS 88 (106)
T 3nrf_A 30 AFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELTADTLKPGASVEGDAIFAS 88 (106)
T ss_dssp EEEEEEECCSSSCEECTTCEEEEEETTSCEEEEEEECGGGGCSEECTTCEEEEEEEEEE
T ss_pred EEEEEEecCCCCccccchhhheeeCcCCCEEEecccchhhhhccccCCCceeeEEEEee
Confidence 5678889998888762 22333333223377777766666 99999999999999876
No 42
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=27.05 E-value=2.8e+02 Score=32.81 Aligned_cols=71 Identities=11% Similarity=0.014 Sum_probs=51.2
Q ss_pred cCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEc-----ceeeeeccCCceeeee
Q 015529 322 TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMIN-----GLRIMVTQFGWLIETI 396 (405)
Q Consensus 322 ~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~-----~~~lg~l~p~~~~~~~ 396 (405)
....+++.+.+ ++|-.|.-|+-|.+.+.|.|+++..+. +.|.+..+ +. +|... ..+.-.++++++...-
T Consensus 808 i~v~kpffv~l-~LPysv~rGEq~~l~v~VfNy~~~~~~-V~V~L~~s--~~--~~~~~~~~~~~~q~v~v~a~~~~~v~ 881 (1642)
T 3prx_B 808 IRVMKVFFIDL-QMPYSVVKNEQVEIRAILHNYVNEDIY-VRVELLYN--PA--FCSASTKGQRYRQQFPIKALSSRAVP 881 (1642)
T ss_dssp EEBCCSEEEEC-CCCSCEETTCCEEEEEEEEECSSSCEE-EEEEECCC--TT--EEESCCSSSCCEEEEEECSSEEEEEE
T ss_pred EEEECCEEEEc-cCCCEEecCCEEEEEEEEEcCCCCcEE-EEEEEEcC--CC--eEeeccCCCcceeEEEECCCCeEEEE
Confidence 44566666664 899999999999999999999999986 88888776 22 34322 1344567777766555
Q ss_pred eE
Q 015529 397 FM 398 (405)
Q Consensus 397 ~~ 398 (405)
|.
T Consensus 882 f~ 883 (1642)
T 3prx_B 882 FV 883 (1642)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 43
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=25.70 E-value=78 Score=26.40 Aligned_cols=46 Identities=13% Similarity=0.270 Sum_probs=33.9
Q ss_pred CeEEEEEecC-ceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcc---eeeee
Q 015529 327 EIELNVVEVP-SVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMING---LRIMV 386 (405)
Q Consensus 327 dl~l~v~~~P-~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~---~~lg~ 386 (405)
|++|+|..-- .+|.+|.||.++|-++=|..|+- ..||=++| ++|+.
T Consensus 10 ~~ql~iKR~S~hsv~~G~~f~leCpv~yc~~rP~--------------VtWcKln~~~c~~L~~ 59 (120)
T 2aw2_A 10 DVQLYIKRQSEHSILAGDPFELECPVKYCANRPH--------------VTWCKLNGTTCVKLED 59 (120)
T ss_dssp CCEECCCTTEEEEEETTSCEEEEEEEECSSSCCE--------------EEEEEECSSCEEECCS
T ss_pred ceEEEEEecccceEecCCeEEEEccEEeccCCCc--------------eEEEecCCceEEECcc
Confidence 4556554432 48899999999999999988775 47888887 55544
No 44
>2huh_A Putative DNA mismatch repair protein; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.54A {Bacteroides thetaiotaomicron} SCOP: b.7.5.1
Probab=24.08 E-value=1.2e+02 Score=26.17 Aligned_cols=64 Identities=8% Similarity=-0.024 Sum_probs=46.6
Q ss_pred cCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCcee
Q 015529 322 TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLI 393 (405)
Q Consensus 322 ~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~ 393 (405)
..+-.-|-+++.-+|--.+--.-=.++|.+.|.|+=.+. +....... -.| .++.-|.|+|+..+
T Consensus 5 r~gg~~l~vyLAfvP~n~k~~~~t~fe~YlVNdSNy~l~-f~y~~~~~----~~w---~l~~~G~iePntk~ 68 (147)
T 2huh_A 5 VRGGDTLNVFLAYVPEDAKAMMTTPFEAYLVNDSNYYLY-YTYLSAEG----KAW---NNRSHGLVEPNTKL 68 (147)
T ss_dssp CTTTTSCCEEEEEEESCTTCTTTCCEEEEEEECSSSEEE-EEEEEEET----TEE---EEEEEEEECTTEEE
T ss_pred ccCCcEEEEEEEEEecchhhccCcceEEEEEeCCCcEEE-EEEEEeeC----CeE---EEEEeeEECCCcEE
Confidence 345566778888888666655556678999999999997 66655554 245 45678999998754
No 45
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=24.01 E-value=1.2e+02 Score=24.33 Aligned_cols=65 Identities=11% Similarity=0.065 Sum_probs=38.8
Q ss_pred cCCCeEEEEEecCceeEeCC-----cEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceee
Q 015529 324 TSKEIELNVVEVPSVVGIDK-----PFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIE 394 (405)
Q Consensus 324 ~~~dl~l~v~~~P~~v~v~~-----PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~ 394 (405)
.+.++++.|.........+. -=..+++|.|.+++... +.|.+... +.+.|.|.. --.++|+...+
T Consensus 7 ~R~~~~l~V~rdR~~Ly~~~~dG~I~N~Ytlki~Nkt~~~~~-~~l~v~g~--~~l~~~g~~---~i~v~~g~~~~ 76 (118)
T 2r39_A 7 AVDPAGMSVIRDRNQLFRVNSAGEVENTYTLKVINKTQQVQE-YNLDVKGL--NDVSWYGKQ---TIQVEPGEVLN 76 (118)
T ss_dssp -CCSEEEEEEECSSCCCCC--CCSEEEEEEEEEEECSSSCEE-EEEEEESC--SSCEEESCC---EEEECTTCEEE
T ss_pred ccCccEEEEEecCCceEEEcCCCeEEEEEEEEEEECCCCCEE-EEEEEeCC--cccEEeCCC---cEEECCCCEEE
Confidence 46677777776553222211 12457788999999886 88888763 447777643 13455555443
No 46
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=23.90 E-value=1.9e+02 Score=23.78 Aligned_cols=44 Identities=9% Similarity=-0.028 Sum_probs=31.6
Q ss_pred EEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeee
Q 015529 346 LLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETI 396 (405)
Q Consensus 346 ~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~ 396 (405)
...++|+|.|+..+- + .|+-+ ++..||--- ..|.++||++.+-.
T Consensus 26 ~~~l~L~N~t~~~vA-F--KVKtT--~p~~YrVrP--~~G~I~Pg~~~~I~ 69 (116)
T 1m1s_A 26 NSTHNITSESDSRLA-F--KVKSS--NNEHYRVRP--VYGFVDAKGKSKLD 69 (116)
T ss_dssp EEEEEEEECSSSEEE-E--EEEES--CTTTEEEEC--SEEEECTTCEEEEE
T ss_pred EEEEEEECCCCCeEE-E--EEEec--CCCceEEcC--CceEECCCCeEEEE
Confidence 678999999987753 4 45444 556777632 35999999998854
No 47
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=23.64 E-value=2.4e+02 Score=22.73 Aligned_cols=59 Identities=14% Similarity=0.188 Sum_probs=39.1
Q ss_pred EEEEEEecCCCcceeeEEEEEEEeCCCce-eeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEE
Q 015529 104 CSYISINNSSTLEVRDVVIKAEIQTDKQR-ILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCT 171 (405)
Q Consensus 104 s~yisv~N~s~~~v~~V~ikaelQT~s~r-~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~ 171 (405)
+|.+.+.|.++.. |.+|| .|.+.+ ..... ...-++||++.+..|-+.=-+...|-+.+.
T Consensus 18 ~~~l~L~N~t~~~---vaFKV--KtT~p~~y~VrP----~~G~I~P~~~~~i~I~~q~~~~~~dKflvq 77 (109)
T 1row_A 18 SSTHKLVNGGAEK---IVFKI--KSSNNNEYRIAP----VFGFVDPSGSKDVVITRTAGAPKEDKLVVH 77 (109)
T ss_dssp EEEEEEEECSSSC---EEEEE--EESCSSSEEEEC----SEEEECTTEEEEEEEEECSCCCEEEEEEEE
T ss_pred eEEEEEEcCCCCe---EEEEE--EeCCCCceEEcC----CceEECCCCeEEEEEEeCCCCCCCCEEEEE
Confidence 5999999998864 46665 344332 22211 246789999999998887655566666544
No 48
>1kyf_A Alpha-adaptin C; protein-peptide complex, endocytosis, endocytosis/exocytosis complex; 1.22A {Mus musculus} SCOP: b.1.10.1 d.105.1.1 PDB: 1ky7_A 1kyd_A 1ky6_A 1kyu_A 1qtp_A 1qts_A 2vj0_A 1w80_A 1b9k_A
Probab=23.50 E-value=1.3e+02 Score=27.76 Aligned_cols=77 Identities=10% Similarity=0.063 Sum_probs=56.2
Q ss_pred eeeccceEEEEEEecCCCcceeeEEEEEEEeCCCc---eeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEEEE
Q 015529 97 IYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQ---RILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTAL 173 (405)
Q Consensus 97 iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~---r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~V~ 173 (405)
-|-|..-.-.+.++|-++.+++++.+.++ .+.. .+.+.. ......++||+..+..+..+.++.=.......++
T Consensus 38 e~~~~~gri~l~~gNKs~~~l~~f~~~i~--~~~~~~~~l~~~~--~~~~~~I~~~~q~qq~i~v~~~~~f~~~P~l~is 113 (247)
T 1kyf_A 38 EFRQNLGRMFIFYGNKTSTQFLNFTPTLI--CADDLQTNLNLQT--KPVDPTVDGGAQVQQVVNIECISDFTEAPVLNIQ 113 (247)
T ss_dssp EEETTEEEEEEEEEECSSSCBEEEEEEEE--CCHHHHHHEEEEE--CCCCSCBCTTCEEEEEEEEEECSCCCCCCEEEEE
T ss_pred EEeCCeEEEEEEEEcCCCCceeeEEEEEe--cCcccCCCeeEec--CCCCceeCCCcEEEEEEEEEEccccCCCCEEEEE
Confidence 45666667888899999999999877654 3321 122211 1123479999999999999999988778889999
Q ss_pred EEcC
Q 015529 174 YSDG 177 (405)
Q Consensus 174 Y~~~ 177 (405)
|..+
T Consensus 114 f~~~ 117 (247)
T 1kyf_A 114 FRYG 117 (247)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9764
No 49
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=22.78 E-value=1.3e+02 Score=30.10 Aligned_cols=46 Identities=17% Similarity=0.297 Sum_probs=38.0
Q ss_pred CcCCCeEEEEEecCc-eeEeCCcEEEEEEEEeCCCCceecEEEEEecC
Q 015529 323 ITSKEIELNVVEVPS-VVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQN 369 (405)
Q Consensus 323 ~~~~dl~l~v~~~P~-~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~ 369 (405)
...+.|.|.+ .+|. .+.-|++..+++.|.|+|.+.+..+.+.|.+-
T Consensus 189 ~ssGpl~l~v-sLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~ 235 (392)
T 1suj_A 189 LSDRPLHLEA-SLDKEIYYHGEPINVNVKINNTTGKIVKKIKIIVEQV 235 (392)
T ss_dssp ETTEEEEEEE-EESCSEEETTCCEEEEEEEEECSSSEEEEEEEEEEEE
T ss_pred ecCCCEEEEE-EeCCccccCCCEEEEEEEEECCCCCcEeEEEEEEEEE
Confidence 4577788885 5665 67889999999999999999998888888773
No 50
>3nm7_A Uncharacterized protein; PUR-alpha, PUR repeat, PUR domain, PURA, whirly fold, RNA BI DNA binding, nucleic acid binding protein; 2.20A {Borrelia burgdorferi}
Probab=22.71 E-value=55 Score=27.51 Aligned_cols=34 Identities=26% Similarity=0.528 Sum_probs=20.1
Q ss_pred EEecCCCCceeeeeeccccc----------cCcCCCeEEEEEec
Q 015529 302 TWRTNLGEPGRLQTQQILGT----------TITSKEIELNVVEV 335 (405)
Q Consensus 302 ~WRs~~Ge~G~LqTs~L~~~----------~~~~~dl~l~v~~~ 335 (405)
.||--||++|-+-|.++.+. ....+|+-|.|++-
T Consensus 1 ~~~~~Mg~ReEIfSkkv~~aGkRTYFFDVK~tR~gDyyLtITES 44 (127)
T 3nm7_A 1 MWRKLMGERGEVYSEKLFTESERTYFFNVKENRKGDYFLNIVES 44 (127)
T ss_dssp -------CTTEEEEEEECCSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred ChhHhhcchhhhhHHHHhhCCCeeEEEEeecccCCCeEEEEEee
Confidence 49999999999999887432 23578888888763
No 51
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=21.61 E-value=1.2e+02 Score=28.26 Aligned_cols=53 Identities=15% Similarity=0.113 Sum_probs=36.9
Q ss_pred CCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceee-eeccCCceeeeee
Q 015529 342 DKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRI-MVTQFGWLIETIF 397 (405)
Q Consensus 342 ~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~l-g~l~p~~~~~~~~ 397 (405)
+--..+.++++|.+...|..++|-.-.+-. .+...++ .+. ..|+||.|.++..
T Consensus 54 ~g~i~l~l~~~N~s~~~is~faIQfNkNsF-GL~p~~~--~~~~~~L~pgqs~~v~l 107 (258)
T 2g30_A 54 QGHIYMEMNFTNKALQHMTDFAIQFNKNSF-GVIPSTP--LAIHTPLMPNQSIDVSL 107 (258)
T ss_dssp TTEEEEEEEEEECSSSCBCCCEEEECCBTT-CCEESSC--CCCCSCBCTTCEEEEEE
T ss_pred CCEEEEEEEEecCCccceeeeEEEEccccc-CcccCcc--ccCCCccCCCCcEEEEE
Confidence 445567899999999999999998866511 1433333 233 5599999988654
Done!