Query 015531
Match_columns 405
No_of_seqs 154 out of 1041
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 14:14:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015531.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015531hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 6.8E-29 2.3E-33 254.2 15.7 129 276-404 8-145 (536)
2 3fro_A GLGA glycogen synthase; 99.1 4.2E-10 1.4E-14 105.7 13.7 115 276-398 1-116 (439)
3 1rzu_A Glycogen synthase 1; gl 98.9 4.1E-09 1.4E-13 102.4 10.5 118 278-398 1-125 (485)
4 2qzs_A Glycogen synthase; glyc 98.9 7.4E-09 2.5E-13 100.6 10.7 118 278-398 1-124 (485)
5 3c48_A Predicted glycosyltrans 97.8 2.8E-05 9.6E-10 73.9 6.1 61 262-322 5-70 (438)
6 2iuy_A Avigt4, glycosyltransfe 96.8 0.0017 5.7E-08 59.9 6.0 49 275-323 1-59 (342)
7 2r60_A Glycosyl transferase, g 96.6 0.0025 8.4E-08 62.4 6.2 46 277-322 7-61 (499)
8 2iw1_A Lipopolysaccharide core 96.4 0.0026 8.8E-08 58.6 4.8 42 278-322 1-42 (374)
9 2gek_A Phosphatidylinositol ma 96.0 0.0079 2.7E-07 56.0 5.8 50 272-323 15-64 (406)
10 2x0d_A WSAF; GT4 family, trans 95.6 0.0059 2E-07 60.1 3.1 45 276-321 45-89 (413)
11 3okp_A GDP-mannose-dependent a 95.1 0.011 3.8E-07 54.6 3.1 44 276-323 3-46 (394)
12 2x6q_A Trehalose-synthase TRET 94.9 0.035 1.2E-06 52.5 6.2 41 276-320 39-79 (416)
13 4amg_A Snogd; transferase, pol 94.9 0.026 9E-07 52.9 5.3 37 276-320 21-59 (400)
14 4fzr_A SSFS6; structural genom 93.2 0.095 3.2E-06 49.6 5.3 38 275-320 13-52 (398)
15 3rsc_A CALG2; TDP, enediyne, s 92.7 0.12 4.1E-06 48.9 5.3 39 274-320 17-57 (415)
16 1f0k_A MURG, UDP-N-acetylgluco 92.4 0.13 4.3E-06 47.5 4.9 39 278-322 7-45 (364)
17 3oy2_A Glycosyltransferase B73 92.2 0.13 4.5E-06 48.4 4.8 40 278-321 1-40 (413)
18 3oti_A CALG3; calicheamicin, T 91.8 0.17 5.8E-06 48.0 5.1 35 277-319 20-56 (398)
19 3tsa_A SPNG, NDP-rhamnosyltran 91.3 0.19 6.5E-06 47.1 4.9 35 277-319 1-37 (391)
20 3ia7_A CALG4; glycosysltransfe 91.1 0.25 8.7E-06 46.0 5.5 36 277-320 4-41 (402)
21 3otg_A CALG1; calicheamicin, T 90.8 0.23 7.9E-06 46.7 4.9 39 274-320 17-57 (412)
22 3h4t_A Glycosyltransferase GTF 90.3 0.26 9E-06 47.4 4.9 35 278-320 1-37 (404)
23 2p6p_A Glycosyl transferase; X 89.1 0.41 1.4E-05 44.9 5.1 36 278-321 1-38 (384)
24 2yjn_A ERYCIII, glycosyltransf 89.0 0.4 1.4E-05 46.4 5.1 38 276-321 19-58 (441)
25 2iyf_A OLED, oleandomycin glyc 88.6 0.44 1.5E-05 45.4 5.0 37 277-321 7-45 (430)
26 2iya_A OLEI, oleandomycin glyc 88.0 0.56 1.9E-05 44.8 5.3 38 276-321 11-50 (424)
27 1rrv_A Glycosyltransferase GTF 86.8 0.71 2.4E-05 44.2 5.3 36 278-321 1-38 (416)
28 1iir_A Glycosyltransferase GTF 86.4 0.71 2.4E-05 44.2 5.1 36 278-321 1-38 (415)
29 2hy7_A Glucuronosyltransferase 83.0 0.75 2.6E-05 44.6 3.5 41 273-318 10-50 (406)
30 2vsy_A XCC0866; transferase, g 82.9 1.5 5.1E-05 43.3 5.7 44 274-321 202-247 (568)
31 2jjm_A Glycosyl transferase, g 79.6 1.8 6.3E-05 40.3 4.8 42 278-322 14-55 (394)
32 4b4o_A Epimerase family protei 73.2 2.9 9.9E-05 38.0 4.1 26 293-318 6-31 (298)
33 1lss_A TRK system potassium up 71.4 4.6 0.00016 32.0 4.5 33 276-319 3-35 (140)
34 3nb0_A Glycogen [starch] synth 62.6 1 3.4E-05 49.0 -1.5 116 280-399 29-178 (725)
35 1psw_A ADP-heptose LPS heptosy 62.1 7.4 0.00025 35.9 4.5 35 278-320 1-39 (348)
36 4g65_A TRK system potassium up 55.2 4.6 0.00016 40.8 1.9 34 276-320 2-35 (461)
37 2ph1_A Nucleotide-binding prot 55.0 14 0.00047 33.4 4.9 38 276-319 16-55 (262)
38 3doj_A AT3G25530, dehydrogenas 53.3 13 0.00044 34.8 4.6 39 271-320 15-53 (310)
39 3tov_A Glycosyl transferase fa 52.9 14 0.00049 35.2 4.9 38 276-321 7-48 (349)
40 1wcv_1 SOJ, segregation protei 52.0 17 0.00056 32.7 4.9 37 276-318 4-42 (257)
41 2vch_A Hydroquinone glucosyltr 51.6 13 0.00046 37.1 4.6 38 276-321 5-45 (480)
42 4dzz_A Plasmid partitioning pr 50.5 15 0.00052 31.0 4.2 36 278-319 1-38 (206)
43 3l4b_C TRKA K+ channel protien 49.4 17 0.00058 31.8 4.4 26 296-321 8-33 (218)
44 2ew2_A 2-dehydropantoate 2-red 49.1 14 0.00048 33.4 4.0 33 276-319 2-34 (316)
45 1v4v_A UDP-N-acetylglucosamine 48.9 10 0.00034 35.1 3.0 36 277-319 5-41 (376)
46 1hyq_A MIND, cell division inh 48.9 22 0.00077 31.5 5.2 38 277-319 1-39 (263)
47 1g3q_A MIND ATPase, cell divis 48.6 25 0.00084 30.5 5.3 39 277-321 1-41 (237)
48 3f6r_A Flavodoxin; FMN binding 47.5 26 0.00089 28.6 5.1 38 277-319 1-38 (148)
49 2pzm_A Putative nucleotide sug 47.3 17 0.00057 33.5 4.2 26 294-319 27-52 (330)
50 2q1w_A Putative nucleotide sug 47.1 18 0.00061 33.4 4.4 45 264-318 8-52 (333)
51 2xj4_A MIPZ; replication, cell 46.7 19 0.00065 33.1 4.5 35 277-317 3-39 (286)
52 4id9_A Short-chain dehydrogena 46.4 16 0.00054 33.6 3.9 42 267-318 9-50 (347)
53 3bfv_A CAPA1, CAPB2, membrane 46.3 22 0.00076 32.9 4.9 35 277-317 81-117 (271)
54 1vgv_A UDP-N-acetylglucosamine 46.0 14 0.00048 34.0 3.5 35 278-319 1-36 (384)
55 1jay_A Coenzyme F420H2:NADP+ o 45.7 19 0.00064 31.1 4.1 26 294-319 7-32 (212)
56 1vl8_A Gluconate 5-dehydrogena 45.7 23 0.00079 32.1 4.8 32 278-318 21-52 (267)
57 3orf_A Dihydropteridine reduct 45.6 19 0.00067 32.1 4.3 35 275-318 19-53 (251)
58 3q9l_A Septum site-determining 44.3 30 0.001 30.4 5.2 38 277-320 1-40 (260)
59 3e8x_A Putative NAD-dependent 44.1 23 0.00078 30.8 4.4 38 271-318 15-52 (236)
60 2a5l_A Trp repressor binding p 41.7 39 0.0013 28.7 5.4 38 276-318 4-41 (200)
61 3s28_A Sucrose synthase 1; gly 41.4 25 0.00085 38.4 5.1 47 277-323 278-343 (816)
62 2dkn_A 3-alpha-hydroxysteroid 40.9 26 0.00088 30.3 4.2 25 294-318 8-32 (255)
63 3ew7_A LMO0794 protein; Q8Y8U8 39.8 31 0.001 29.1 4.4 26 294-319 7-32 (221)
64 2gt1_A Lipopolysaccharide hept 38.8 33 0.0011 31.5 4.8 35 278-320 1-39 (326)
65 3h2s_A Putative NADH-flavin re 38.5 33 0.0011 29.2 4.4 26 293-318 6-31 (224)
66 1gsa_A Glutathione synthetase; 38.4 27 0.00093 31.3 4.1 40 278-320 2-41 (316)
67 3k9g_A PF-32 protein; ssgcid, 38.3 23 0.00078 31.7 3.6 37 275-318 24-62 (267)
68 3of5_A Dethiobiotin synthetase 38.2 30 0.001 31.3 4.4 40 276-319 2-41 (228)
69 3fwz_A Inner membrane protein 37.4 19 0.00064 29.5 2.6 28 295-322 14-41 (140)
70 4huj_A Uncharacterized protein 37.3 26 0.00091 31.0 3.8 32 275-317 21-52 (220)
71 3b6i_A Flavoprotein WRBA; flav 37.0 46 0.0016 28.2 5.1 37 277-318 1-38 (198)
72 3eag_A UDP-N-acetylmuramate:L- 36.3 36 0.0012 32.2 4.8 31 277-317 4-34 (326)
73 3zq6_A Putative arsenical pump 36.1 35 0.0012 32.2 4.6 41 275-321 10-52 (324)
74 3beo_A UDP-N-acetylglucosamine 36.0 16 0.00054 33.4 2.1 38 276-320 7-46 (375)
75 2vns_A Metalloreductase steap3 36.0 27 0.00094 30.8 3.7 33 277-320 28-60 (215)
76 1ks9_A KPA reductase;, 2-dehyd 35.9 30 0.001 30.9 4.0 26 295-320 7-32 (291)
77 4gi5_A Quinone reductase; prot 35.5 33 0.0011 32.7 4.3 40 274-317 19-59 (280)
78 3hly_A Flavodoxin-like domain; 35.4 48 0.0017 28.0 5.0 36 278-318 1-36 (161)
79 2gn4_A FLAA1 protein, UDP-GLCN 35.3 34 0.0012 32.2 4.4 47 263-318 6-54 (344)
80 3r6d_A NAD-dependent epimerase 34.7 46 0.0016 28.5 4.8 34 277-319 4-38 (221)
81 4fs3_A Enoyl-[acyl-carrier-pro 34.4 46 0.0016 30.1 5.0 44 279-322 141-193 (256)
82 3guy_A Short-chain dehydrogena 34.0 30 0.001 30.2 3.5 32 278-318 1-32 (230)
83 1byr_A Protein (endonuclease); 33.4 76 0.0026 25.8 5.8 26 297-323 40-65 (155)
84 2rcy_A Pyrroline carboxylate r 33.3 27 0.00093 31.1 3.2 36 274-320 1-40 (262)
85 1fjh_A 3alpha-hydroxysteroid d 33.1 41 0.0014 29.5 4.3 32 278-318 1-32 (257)
86 3ea0_A ATPase, para family; al 32.7 36 0.0012 29.6 3.8 38 276-319 2-42 (245)
87 3cio_A ETK, tyrosine-protein k 32.5 59 0.002 30.4 5.5 36 277-318 103-140 (299)
88 1ydg_A Trp repressor binding p 32.1 70 0.0024 27.6 5.6 38 276-318 5-42 (211)
89 3dhn_A NAD-dependent epimerase 32.0 45 0.0015 28.5 4.3 28 293-320 10-37 (227)
90 1jx7_A Hypothetical protein YC 32.0 71 0.0024 24.9 5.1 44 278-324 2-47 (117)
91 3rft_A Uronate dehydrogenase; 31.8 24 0.00082 31.6 2.6 32 278-318 3-34 (267)
92 3qxc_A Dethiobiotin synthetase 31.7 48 0.0016 30.6 4.7 40 276-319 19-58 (242)
93 2hna_A Protein MIOC, flavodoxi 31.4 53 0.0018 26.9 4.5 35 278-317 2-36 (147)
94 3llv_A Exopolyphosphatase-rela 31.3 27 0.00093 28.1 2.6 25 296-320 14-38 (141)
95 2pq6_A UDP-glucuronosyl/UDP-gl 31.0 51 0.0017 32.6 5.0 39 277-321 8-46 (482)
96 3pg5_A Uncharacterized protein 30.7 45 0.0015 32.0 4.5 35 278-318 1-37 (361)
97 1ihu_A Arsenical pump-driving 30.6 40 0.0014 34.4 4.3 37 277-320 7-45 (589)
98 1yb4_A Tartronic semialdehyde 30.5 22 0.00077 32.2 2.2 32 276-318 2-33 (295)
99 3slg_A PBGP3 protein; structur 30.3 34 0.0012 31.7 3.5 28 293-320 30-58 (372)
100 2c5a_A GDP-mannose-3', 5'-epim 30.3 75 0.0026 29.8 5.9 26 294-319 36-61 (379)
101 3kjh_A CO dehydrogenase/acetyl 30.3 45 0.0015 28.7 4.0 33 278-318 1-35 (254)
102 1f4p_A Flavodoxin; electron tr 30.1 63 0.0022 26.1 4.7 36 278-318 1-36 (147)
103 1bg6_A N-(1-D-carboxylethyl)-L 30.0 43 0.0015 31.0 4.1 32 277-319 4-35 (359)
104 2hy5_A Putative sulfurtransfer 29.4 94 0.0032 25.4 5.7 44 278-324 1-45 (130)
105 1cp2_A CP2, nitrogenase iron p 29.4 43 0.0015 29.8 3.8 33 278-317 1-35 (269)
106 3k31_A Enoyl-(acyl-carrier-pro 29.3 85 0.0029 28.8 5.9 31 279-318 31-63 (296)
107 1rw7_A YDR533CP; alpha-beta sa 29.1 71 0.0024 28.9 5.3 45 277-322 3-53 (243)
108 2pv7_A T-protein [includes: ch 29.0 28 0.00096 32.4 2.6 26 294-319 28-53 (298)
109 4hb9_A Similarities with proba 28.4 58 0.002 30.0 4.6 30 277-317 1-30 (412)
110 3mcu_A Dipicolinate synthase, 28.2 62 0.0021 29.7 4.7 38 278-323 6-45 (207)
111 3dqp_A Oxidoreductase YLBE; al 28.1 44 0.0015 28.6 3.6 26 294-319 7-32 (219)
112 1id1_A Putative potassium chan 27.9 35 0.0012 28.0 2.8 26 294-320 10-35 (153)
113 1byi_A Dethiobiotin synthase; 27.8 59 0.002 27.9 4.3 35 279-319 2-38 (224)
114 4ep1_A Otcase, ornithine carba 27.8 42 0.0014 33.3 3.7 35 276-320 178-212 (340)
115 3ek2_A Enoyl-(acyl-carrier-pro 27.4 59 0.002 28.6 4.4 22 297-318 26-47 (271)
116 3d7l_A LIN1944 protein; APC893 27.2 56 0.0019 27.5 4.0 25 294-319 10-34 (202)
117 1x0v_A GPD-C, GPDH-C, glycerol 26.9 29 0.00099 32.5 2.3 39 271-320 2-47 (354)
118 3ggo_A Prephenate dehydrogenas 26.7 62 0.0021 30.6 4.6 32 277-319 33-66 (314)
119 4dll_A 2-hydroxy-3-oxopropiona 26.6 50 0.0017 31.0 3.9 34 276-320 30-63 (320)
120 1orr_A CDP-tyvelose-2-epimeras 26.5 58 0.002 29.5 4.2 26 293-318 7-32 (347)
121 3dfz_A SIRC, precorrin-2 dehyd 26.5 41 0.0014 31.0 3.2 26 296-321 39-64 (223)
122 3sds_A Ornithine carbamoyltran 26.2 72 0.0025 31.7 5.1 40 271-320 182-221 (353)
123 2b69_A UDP-glucuronate decarbo 25.9 57 0.0019 29.9 4.1 26 294-319 34-59 (343)
124 3ghy_A Ketopantoate reductase 25.8 52 0.0018 30.9 3.9 32 277-319 3-34 (335)
125 1t2a_A GDP-mannose 4,6 dehydra 25.8 61 0.0021 30.1 4.3 25 294-318 31-55 (375)
126 3end_A Light-independent proto 25.7 66 0.0023 29.4 4.5 35 277-318 40-76 (307)
127 1sny_A Sniffer CG10964-PA; alp 25.6 59 0.002 28.6 4.0 33 278-319 21-56 (267)
128 3l77_A Short-chain alcohol deh 25.5 67 0.0023 27.8 4.3 32 278-318 2-33 (235)
129 2qyt_A 2-dehydropantoate 2-red 25.5 47 0.0016 30.2 3.4 31 278-319 9-45 (317)
130 3qvo_A NMRA family protein; st 25.4 48 0.0016 29.0 3.3 33 277-318 22-55 (236)
131 3ug7_A Arsenical pump-driving 25.3 72 0.0025 30.5 4.8 36 277-318 24-61 (349)
132 2ark_A Flavodoxin; FMN, struct 25.3 77 0.0026 27.1 4.6 37 277-318 4-41 (188)
133 1n7h_A GDP-D-mannose-4,6-dehyd 25.2 63 0.0022 30.1 4.3 25 294-318 35-59 (381)
134 2zki_A 199AA long hypothetical 25.1 83 0.0028 26.7 4.7 36 277-318 4-39 (199)
135 3qsg_A NAD-binding phosphogluc 25.0 47 0.0016 31.1 3.4 34 276-320 23-57 (312)
136 2r85_A PURP protein PF1517; AT 24.8 57 0.0019 29.7 3.8 31 278-320 3-33 (334)
137 1ykg_A SIR-FP, sulfite reducta 24.7 47 0.0016 28.1 3.0 36 277-317 9-44 (167)
138 3fkq_A NTRC-like two-domain pr 24.5 66 0.0023 30.8 4.4 38 275-318 140-179 (373)
139 2hmt_A YUAA protein; RCK, KTN, 24.4 43 0.0015 26.2 2.6 27 293-320 12-38 (144)
140 2ahr_A Putative pyrroline carb 24.4 51 0.0017 29.4 3.3 32 277-319 3-34 (259)
141 2c20_A UDP-glucose 4-epimerase 24.1 69 0.0024 28.9 4.2 26 293-318 7-32 (330)
142 3gk3_A Acetoacetyl-COA reducta 23.8 60 0.0021 29.1 3.7 32 278-318 25-56 (269)
143 3gpi_A NAD-dependent epimerase 23.7 76 0.0026 28.2 4.4 23 298-320 13-35 (286)
144 3lqk_A Dipicolinate synthase s 23.6 51 0.0017 30.0 3.2 38 278-323 8-47 (201)
145 2rhc_B Actinorhodin polyketide 23.3 96 0.0033 28.0 5.0 31 279-318 23-53 (277)
146 1hdo_A Biliverdin IX beta redu 23.1 53 0.0018 27.2 3.0 28 293-320 9-36 (206)
147 3t7c_A Carveol dehydrogenase; 23.0 79 0.0027 29.0 4.4 31 279-318 29-59 (299)
148 1d4a_A DT-diaphorase, quinone 22.8 77 0.0026 29.4 4.3 38 277-318 2-40 (273)
149 3fgn_A Dethiobiotin synthetase 22.6 88 0.003 29.0 4.7 40 276-319 24-63 (251)
150 2izz_A Pyrroline-5-carboxylate 22.4 56 0.0019 30.7 3.4 36 274-320 19-58 (322)
151 2gk4_A Conserved hypothetical 22.2 75 0.0026 29.6 4.1 23 293-318 28-50 (232)
152 2g1u_A Hypothetical protein TM 22.2 52 0.0018 27.1 2.8 27 296-322 27-53 (155)
153 1js1_X Transcarbamylase; alpha 22.2 57 0.002 32.1 3.4 32 288-320 174-205 (324)
154 1mvl_A PPC decarboxylase athal 22.1 89 0.0031 28.6 4.6 37 277-322 19-56 (209)
155 3oh8_A Nucleoside-diphosphate 22.1 90 0.0031 31.1 5.0 34 277-320 147-180 (516)
156 3hn2_A 2-dehydropantoate 2-red 22.0 66 0.0023 29.9 3.7 32 278-320 3-34 (312)
157 1zmt_A Haloalcohol dehalogenas 22.0 48 0.0017 29.4 2.7 31 278-317 1-31 (254)
158 1o5i_A 3-oxoacyl-(acyl carrier 21.8 86 0.003 27.8 4.3 31 279-318 20-50 (249)
159 2x4g_A Nucleoside-diphosphate- 21.7 88 0.003 28.3 4.4 26 294-319 20-45 (342)
160 3dtt_A NADP oxidoreductase; st 21.7 50 0.0017 29.7 2.8 34 276-320 18-51 (245)
161 3gd5_A Otcase, ornithine carba 21.3 66 0.0023 31.5 3.7 35 276-320 156-190 (323)
162 2rh8_A Anthocyanidin reductase 21.2 59 0.002 29.6 3.1 26 293-318 15-40 (338)
163 1tvm_A PTS system, galactitol- 21.1 97 0.0033 25.2 4.2 41 276-324 20-63 (113)
164 3ezl_A Acetoacetyl-COA reducta 20.9 72 0.0025 28.0 3.6 32 278-318 13-44 (256)
165 4f6c_A AUSA reductase domain p 20.9 70 0.0024 30.6 3.8 32 278-318 69-100 (427)
166 3ic5_A Putative saccharopine d 20.9 58 0.002 24.6 2.6 25 294-319 12-37 (118)
167 2d1p_A TUSD, hypothetical UPF0 20.8 1.7E+02 0.0058 24.9 5.8 41 277-320 12-53 (140)
168 1v0w_A Phospholipase D; hydrol 20.8 1.1E+02 0.0036 30.8 5.2 43 279-322 329-373 (506)
169 3nrc_A Enoyl-[acyl-carrier-pro 20.6 68 0.0023 29.0 3.4 31 279-318 27-59 (280)
170 4f2g_A Otcase 1, ornithine car 20.5 71 0.0024 31.1 3.7 35 276-320 153-187 (309)
171 3m2p_A UDP-N-acetylglucosamine 20.3 99 0.0034 27.8 4.5 28 293-320 8-35 (311)
172 3mc3_A DSRE/DSRF-like family p 20.2 1.9E+02 0.0063 23.9 5.8 45 277-324 15-59 (134)
173 2pk3_A GDP-6-deoxy-D-LYXO-4-he 20.0 62 0.0021 29.1 3.0 25 294-318 19-43 (321)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.96 E-value=6.8e-29 Score=254.21 Aligned_cols=129 Identities=43% Similarity=0.727 Sum_probs=106.3
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCCCCCCCCCCceEEEEEeCCcceEEEEEEEEeCCe
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGV 355 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~~i~e~~~~~~~~~~~~~G~~~~v~V~~~~i~GV 355 (405)
..|||||||+||+||+||||||||+++||+||+++||+|+||||.|+.+.+..+......+.+.+....+.+++...+||
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 87 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV 87 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence 46999999999999999999999999999999999999999999999886543333334556777777889999889999
Q ss_pred EEEEEeCCCCCCCC-----CCcccC----CCCCHHHHHHHHHHHHHHHHhhcCCCCCC
Q 015531 356 DFVFLDSPLFRHLG-----NNIYGG----GREDILKRMVLFCKAAIEVKFYSRHKNYN 404 (405)
Q Consensus 356 ~vYFIdnp~fF~R~-----~~IYG~----~y~DNaeRFafFckAALEll~~L~~g~~~ 404 (405)
++|||++|.||+|. +.+|+. +|.||.+||++||+|++++++.+.++..+
T Consensus 88 ~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~ 145 (536)
T 3vue_A 88 DRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNP 145 (536)
T ss_dssp EEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCT
T ss_pred eEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccch
Confidence 99999999999763 357874 47899999999999999999999877654
No 2
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.14 E-value=4.2e-10 Score=105.75 Aligned_cols=115 Identities=24% Similarity=0.341 Sum_probs=93.2
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCCCCCCCCCCceEEEEEeCCcceEEEEEEEEeCCe
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGV 355 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~~i~e~~~~~~~~~~~~~G~~~~v~V~~~~i~GV 355 (405)
+.||||||+.++.| ...||.+.++..|.++|+++||+|.|++|.|....... ...+.+-+....+.++....+||
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIRVFGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE----EEEEEETTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh----hccccccCcccceeeeeccCCCc
Confidence 36999999999999 89999999999999999999999999999998664321 11222234455677777788999
Q ss_pred EEEEEeCCCCCCCCCCcccCCCCCH-HHHHHHHHHHHHHHHhhc
Q 015531 356 DFVFLDSPLFRHLGNNIYGGGREDI-LKRMVLFCKAAIEVKFYS 398 (405)
Q Consensus 356 ~vYFIdnp~fF~R~~~IYG~~y~DN-aeRFafFckAALEll~~L 398 (405)
+++.+.. .+|.+. .+|+. +.|+ ..||..|+++++.+++++
T Consensus 76 ~v~~~~~-~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 116 (439)
T 3fro_A 76 RIYRIGG-GLLDSE-DVYGP-GWDGLIRKAVTFGRASVLLLNDL 116 (439)
T ss_dssp EEEEEES-GGGGCS-STTCS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecc-hhcccc-ccccC-CcchhhhhhHHHHHHHHHHHHHH
Confidence 9999999 777653 57764 4577 899999999999999876
No 3
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.91 E-value=4.1e-09 Score=102.43 Aligned_cols=118 Identities=30% Similarity=0.412 Sum_probs=87.6
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCCCCCCC-CCCceEEEEE--eCCcceEEEEEEEEeCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEP-QDTGIRKRYR--VDRQDIEVAYFQAYIDG 354 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~~i~e~-~~~~~~~~~~--~~G~~~~v~V~~~~i~G 354 (405)
||||||+.++.|+.+.||.+.++..|+++|+++||+|.|++|.+...... ........+. +++ ...++....+|
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g 77 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGE---KADLLEVQHER 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSC---CEEEEEEEETT
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCC---eEEEEEEEecC
Confidence 89999999999999999999999999999999999999999988642210 0111111111 111 23455555689
Q ss_pred eEEEEEeCCCCCCCCCCcccC----CCCCHHHHHHHHHHHHHHHHhhc
Q 015531 355 VDFVFLDSPLFRHLGNNIYGG----GREDILKRMVLFCKAAIEVKFYS 398 (405)
Q Consensus 355 V~vYFIdnp~fF~R~~~IYG~----~y~DNaeRFafFckAALEll~~L 398 (405)
|+++.+..+.+|.+.+++|+. ++.++..||.+|++++.++++.+
T Consensus 78 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (485)
T 1rzu_A 78 LDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGV 125 (485)
T ss_dssp EEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHh
Confidence 999999988777543236752 46789999999999999988765
No 4
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.87 E-value=7.4e-09 Score=100.65 Aligned_cols=118 Identities=26% Similarity=0.349 Sum_probs=86.5
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCCCCCCCC-CCceEEEEE-eCCcceEEEEEEEEeCCe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQ-DTGIRKRYR-VDRQDIEVAYFQAYIDGV 355 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~~i~e~~-~~~~~~~~~-~~G~~~~v~V~~~~i~GV 355 (405)
||||||+.++.|+.+.||.+.++..|+++|+++||+|.|++|.+....... .......+. +++ ...++....+||
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gv 77 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAG---HITLLFGHYNGV 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTC---CEEEEEEEETTE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCC---cEEEEEEEECCc
Confidence 899999999999999999999999999999999999999999875421100 111111111 111 134444456899
Q ss_pred EEEEEeCCCCCCCCCCcccC----CCCCHHHHHHHHHHHHHHHHhhc
Q 015531 356 DFVFLDSPLFRHLGNNIYGG----GREDILKRMVLFCKAAIEVKFYS 398 (405)
Q Consensus 356 ~vYFIdnp~fF~R~~~IYG~----~y~DNaeRFafFckAALEll~~L 398 (405)
+++.+..+.+|.+.+.+|+. .|.++..||.+|++++.++++++
T Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (485)
T 2qzs_A 78 GIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGL 124 (485)
T ss_dssp EEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTS
T ss_pred EEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHh
Confidence 99999988777543226653 46788999999999999988764
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.76 E-value=2.8e-05 Score=73.92 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=41.5
Q ss_pred CCCCcCCCCCCCCCCCceEEEEeccccccc-----ccccHhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 262 PKTEEAKPPPLAGANVMNVILVAAECGPWS-----KTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 262 ~~~~~~~~ppl~~~n~MKILfVSSE~aPfa-----KTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
.+++.+.+.+..+..+||||||+..+.|+. ..||.+.++..|.++|+++||+|.|+++...
T Consensus 5 ~~~~~~~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~ 70 (438)
T 3c48_A 5 HHHHHHSSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATR 70 (438)
T ss_dssp --------------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred ccccccccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCC
Confidence 456777788888999999999999999975 5799999999999999999999999998865
No 6
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=96.77 E-value=0.0017 Score=59.94 Aligned_cols=49 Identities=22% Similarity=0.229 Sum_probs=41.2
Q ss_pred CCCceEEEEecc--------ccccc--ccccHhHHHhhHHHHHHHCCCeEEEEeeCCCC
Q 015531 275 ANVMNVILVAAE--------CGPWS--KTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (405)
Q Consensus 275 ~n~MKILfVSSE--------~aPfa--KTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~~ 323 (405)
+++||||||+.. ++||. ..||..-++..|.++|+++||+|.|+.+....
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~ 59 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSP 59 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSC
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCC
Confidence 356999999999 65544 46999999999999999999999999998654
No 7
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.60 E-value=0.0025 Score=62.40 Aligned_cols=46 Identities=17% Similarity=0.148 Sum_probs=42.0
Q ss_pred CceEEEEeccccccc---------ccccHhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 277 VMNVILVAAECGPWS---------KTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 277 ~MKILfVSSE~aPfa---------KTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
.||||||+....|.. ..||.+-++..|.++|+++||+|.|+++...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~ 61 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIK 61 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCC
Confidence 499999999999863 6899999999999999999999999998764
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=96.42 E-value=0.0026 Score=58.59 Aligned_cols=42 Identities=29% Similarity=0.343 Sum_probs=38.1
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
|||+||+....| .||.+.++..|.++|+++||+|.|+.+...
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 42 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWE 42 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEEC
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCC
Confidence 899999999888 499999999999999999999999998753
No 9
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=96.01 E-value=0.0079 Score=55.99 Aligned_cols=50 Identities=24% Similarity=0.301 Sum_probs=38.4
Q ss_pred CCCCCCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCCC
Q 015531 272 LAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (405)
Q Consensus 272 l~~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~~ 323 (405)
....++||||||+.... ...||...++..|.++|+++||+|.|+.+....
T Consensus 15 ~~~~~~MkIl~i~~~~~--~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 64 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSF--DVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64 (406)
T ss_dssp ------CEEEEECSSCT--TSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred ccCCCcceEEEEeccCC--CCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence 33446799999996433 356999999999999999999999999998764
No 10
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.55 E-value=0.0059 Score=60.09 Aligned_cols=45 Identities=11% Similarity=0.107 Sum_probs=40.3
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y 321 (405)
..|||+||+..+.|-...||.. ++..|.++|+++||+|.|++|.+
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecC
Confidence 4599999999999976789886 68899999999999999999975
No 11
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=95.06 E-value=0.011 Score=54.57 Aligned_cols=44 Identities=14% Similarity=0.222 Sum_probs=39.5
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCCC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~~ 323 (405)
.+||||||+....|. .||...++..|.++| .||+|.|+.+....
T Consensus 3 ~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~ 46 (394)
T 3okp_A 3 ASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNA 46 (394)
T ss_dssp -CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSH
T ss_pred CCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCc
Confidence 469999999998887 899999999999999 69999999998764
No 12
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=94.95 E-value=0.035 Score=52.52 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=36.3
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
.+||||||+... ..||..-++..|.++|+++||+|.|++..
T Consensus 39 ~~mkIl~v~~~~----~~GG~~~~~~~l~~~L~~~G~~v~v~~~~ 79 (416)
T 2x6q_A 39 KGRSFVHVNSTS----FGGGVAEILHSLVPLLRSIGIEARWFVIE 79 (416)
T ss_dssp TTCEEEEEESCS----SSSTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hccEEEEEeCCC----CCCCHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 459999999862 57999999999999999999999998765
No 13
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=94.94 E-value=0.026 Score=52.91 Aligned_cols=37 Identities=24% Similarity=0.402 Sum_probs=31.1
Q ss_pred CCceEEEEecccccccccccHhHHHh--hHHHHHHHCCCeEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAG--ALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVg--SLPKALa~~GhdV~VIlP~ 320 (405)
+.|||||++. ||.|.+.- +|.++|+++||+|.++++-
T Consensus 21 ~~MRIL~~~~--------p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~ 59 (400)
T 4amg_A 21 QSMRALFITS--------PGLSHILPTVPLAQALRALGHEVRYATGG 59 (400)
T ss_dssp CCCEEEEECC--------SSHHHHGGGHHHHHHHHHTTCEEEEEECS
T ss_pred CCCeEEEECC--------CchhHHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 3599999875 78899876 5678899999999999864
No 14
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=93.19 E-value=0.095 Score=49.59 Aligned_cols=38 Identities=32% Similarity=0.409 Sum_probs=29.2
Q ss_pred CCCceEEEEecccccccccccHhHHH--hhHHHHHHHCCCeEEEEeeC
Q 015531 275 ANVMNVILVAAECGPWSKTGGLGDVA--GALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 275 ~n~MKILfVSSE~aPfaKTGGLGDVV--gSLPKALa~~GhdV~VIlP~ 320 (405)
.+.|||||++. |+-|++. -.|.++|+++||+|.|+.+.
T Consensus 13 ~~~MrIl~~~~--------~~~gh~~~~~~La~~L~~~GheV~v~~~~ 52 (398)
T 4fzr_A 13 GSHMRILVIAG--------CSEGFVMPLVPLSWALRAAGHEVLVAASE 52 (398)
T ss_dssp --CCEEEEECC--------SSHHHHGGGHHHHHHHHHTTCEEEEEEEG
T ss_pred CCceEEEEEcC--------CCcchHHHHHHHHHHHHHCCCEEEEEcCH
Confidence 34599999986 3455554 57889999999999999973
No 15
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=92.72 E-value=0.12 Score=48.90 Aligned_cols=39 Identities=28% Similarity=0.489 Sum_probs=31.3
Q ss_pred CCCCceEEEEecccccccccccHhHHHhh--HHHHHHHCCCeEEEEeeC
Q 015531 274 GANVMNVILVAAECGPWSKTGGLGDVAGA--LPKALARRGHRVMVVAPH 320 (405)
Q Consensus 274 ~~n~MKILfVSSE~aPfaKTGGLGDVVgS--LPKALa~~GhdV~VIlP~ 320 (405)
...+|||||++. ||.|+|... |.++|+++||+|.++.+.
T Consensus 17 ~~~m~rIl~~~~--------~~~GHv~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 17 GRHMAHLLIVNV--------ASHGLILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp --CCCEEEEECC--------SCHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred cccCCEEEEEeC--------CCccccccHHHHHHHHHHCCCEEEEEeCH
Confidence 345799999884 788988766 567899999999999964
No 16
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=92.42 E-value=0.13 Score=47.47 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=32.9
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
|||||++. -+||-.-++..|.++|+++||+|.|+.+...
T Consensus 7 mkIl~~~~------~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~ 45 (364)
T 1f0k_A 7 KRLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADR 45 (364)
T ss_dssp CEEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTS
T ss_pred cEEEEEeC------CCccchhHHHHHHHHHHHcCCEEEEEecCCc
Confidence 89999983 2477777778999999999999999998753
No 17
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=92.21 E-value=0.13 Score=48.37 Aligned_cols=40 Identities=30% Similarity=0.496 Sum_probs=34.7
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y 321 (405)
|||++|+.. .|+ .||.+-++..|.++|+++ |+|.|+.+.-
T Consensus 1 MkI~~v~~~-~p~--~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAH-SSV--PSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEEC-TTC--CSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCC-CCC--CCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 999999864 354 599999999999999999 9999998643
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=91.76 E-value=0.17 Score=47.95 Aligned_cols=35 Identities=26% Similarity=0.488 Sum_probs=28.4
Q ss_pred CceEEEEecccccccccccHhHH--HhhHHHHHHHCCCeEEEEee
Q 015531 277 VMNVILVAAECGPWSKTGGLGDV--AGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDV--VgSLPKALa~~GhdV~VIlP 319 (405)
.|||||++. ||.|.+ +-.|.++|+++||+|.|+.|
T Consensus 20 ~MrIl~~~~--------~~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 20 HMRVLFVSS--------PGIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp CCEEEEECC--------SSHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred cCEEEEEcC--------CCcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 499999986 344444 45788999999999999998
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=91.33 E-value=0.19 Score=47.14 Aligned_cols=35 Identities=31% Similarity=0.361 Sum_probs=28.1
Q ss_pred CceEEEEecccccccccccHhHH--HhhHHHHHHHCCCeEEEEee
Q 015531 277 VMNVILVAAECGPWSKTGGLGDV--AGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDV--VgSLPKALa~~GhdV~VIlP 319 (405)
.|||||++. ||-|.+ +..|.++|+++||+|.|+.+
T Consensus 1 ~MrIl~~~~--------~~~gh~~~~~~la~~L~~~GheV~v~~~ 37 (391)
T 3tsa_A 1 HMRVLVVPL--------PYPTHLMAMVPLCWALQASGHEVLIAAP 37 (391)
T ss_dssp CCEEEEECC--------SCHHHHHTTHHHHHHHHHTTCEEEEEEC
T ss_pred CcEEEEEcC--------CCcchhhhHHHHHHHHHHCCCEEEEecC
Confidence 399999987 345555 45578999999999999986
No 20
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=91.14 E-value=0.25 Score=45.98 Aligned_cols=36 Identities=33% Similarity=0.529 Sum_probs=29.1
Q ss_pred CceEEEEecccccccccccHhHHHhh--HHHHHHHCCCeEEEEeeC
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGA--LPKALARRGHRVMVVAPH 320 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgS--LPKALa~~GhdV~VIlP~ 320 (405)
+|||||++. ||.|+|... |.++|+++||+|.++.+.
T Consensus 4 M~~il~~~~--------~~~Ghv~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 4 QRHILFANV--------QGHGHVYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp CCEEEEECC--------SSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEeC--------CCCcccccHHHHHHHHHhCCCEEEEEcCH
Confidence 459999885 667777655 678899999999999974
No 21
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=90.79 E-value=0.23 Score=46.68 Aligned_cols=39 Identities=23% Similarity=0.295 Sum_probs=30.1
Q ss_pred CCCCceEEEEecccccccccccHhHHH--hhHHHHHHHCCCeEEEEeeC
Q 015531 274 GANVMNVILVAAECGPWSKTGGLGDVA--GALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 274 ~~n~MKILfVSSE~aPfaKTGGLGDVV--gSLPKALa~~GhdV~VIlP~ 320 (405)
....|||||++. |+-|++. -.|.++|+++||+|.|+.+.
T Consensus 17 ~~~~MrIl~~~~--------~~~Gh~~~~~~la~~L~~~GheV~v~~~~ 57 (412)
T 3otg_A 17 EGRHMRVLFASL--------GTHGHTYPLLPLATAARAAGHEVTFATGE 57 (412)
T ss_dssp -CCSCEEEEECC--------SSHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred ccceeEEEEEcC--------CCcccHHHHHHHHHHHHHCCCEEEEEccH
Confidence 345699999994 3445554 56889999999999999975
No 22
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=90.28 E-value=0.26 Score=47.43 Aligned_cols=35 Identities=29% Similarity=0.435 Sum_probs=28.7
Q ss_pred ceEEEEecccccccccccHhHHH--hhHHHHHHHCCCeEEEEeeC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVA--GALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVV--gSLPKALa~~GhdV~VIlP~ 320 (405)
|||+|++. |..|||. -.|.++|+++||+|.|+.|.
T Consensus 1 MrIli~~~--------gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 1 MGVLITGC--------GSRGDTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp -CEEEEEE--------SSHHHHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred CeEEEEeC--------CCCccHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 89999986 6678885 46788999999999999974
No 23
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=89.09 E-value=0.41 Score=44.87 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=28.5
Q ss_pred ceEEEEecccccccccccHhHHH--hhHHHHHHHCCCeEEEEeeCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVA--GALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVV--gSLPKALa~~GhdV~VIlP~Y 321 (405)
||||+++. |+.|++. -.|.++|+++||+|.++.+..
T Consensus 1 MrIl~~~~--------~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~ 38 (384)
T 2p6p_A 1 MRILFVAA--------GSPATVFALAPLATAARNAGHQVVMAANQD 38 (384)
T ss_dssp CEEEEECC--------SSHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CEEEEEeC--------CccchHhHHHHHHHHHHHCCCEEEEEeCHH
Confidence 89999865 4456654 468899999999999998753
No 24
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=89.05 E-value=0.4 Score=46.41 Aligned_cols=38 Identities=29% Similarity=0.368 Sum_probs=30.9
Q ss_pred CCceEEEEecccccccccccHhHHHh--hHHHHHHHCCCeEEEEeeCC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAG--ALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVg--SLPKALa~~GhdV~VIlP~Y 321 (405)
.+|||||++. |+.|++.. +|.++|+++||+|.++.+..
T Consensus 19 ~~mrIl~~~~--------~~~GHv~p~l~la~~L~~~GheV~~~~~~~ 58 (441)
T 2yjn_A 19 SHMRVVFSSM--------ASKSHLFGLVPLAWAFRAAGHEVRVVASPA 58 (441)
T ss_dssp CCCEEEEECC--------SCHHHHTTTHHHHHHHHHTTCEEEEEECGG
T ss_pred CccEEEEEcC--------CCcchHhHHHHHHHHHHHCCCeEEEEeCch
Confidence 3599999966 67788765 67788999999999998754
No 25
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=88.60 E-value=0.44 Score=45.36 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=29.5
Q ss_pred CceEEEEecccccccccccHhHH--HhhHHHHHHHCCCeEEEEeeCC
Q 015531 277 VMNVILVAAECGPWSKTGGLGDV--AGALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDV--VgSLPKALa~~GhdV~VIlP~Y 321 (405)
+|||||++. |+.|++ +-.|.++|+++||+|.++.+..
T Consensus 7 m~kIl~~~~--------~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~ 45 (430)
T 2iyf_A 7 PAHIAMFSI--------AAHGHVNPSLEVIRELVARGHRVTYAIPPV 45 (430)
T ss_dssp -CEEEEECC--------SCHHHHGGGHHHHHHHHHTTCEEEEEECGG
T ss_pred cceEEEEeC--------CCCccccchHHHHHHHHHCCCeEEEEeCHH
Confidence 579999863 456666 4679999999999999999875
No 26
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=88.05 E-value=0.56 Score=44.79 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=30.3
Q ss_pred CCceEEEEecccccccccccHhHHH--hhHHHHHHHCCCeEEEEeeCC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVA--GALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVV--gSLPKALa~~GhdV~VIlP~Y 321 (405)
.+|||+|++. |+.|++. -.|.++|+++||+|.++.+..
T Consensus 11 ~~~~Il~~~~--------~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~ 50 (424)
T 2iya_A 11 TPRHISFFNI--------PGHGHVNPSLGIVQELVARGHRVSYAITDE 50 (424)
T ss_dssp CCCEEEEECC--------SCHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred ccceEEEEeC--------CCCcccchHHHHHHHHHHCCCeEEEEeCHH
Confidence 3589999854 6677774 568899999999999998754
No 27
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=86.83 E-value=0.71 Score=44.16 Aligned_cols=36 Identities=36% Similarity=0.445 Sum_probs=29.5
Q ss_pred ceEEEEecccccccccccHhHHHh--hHHHHHHHCCCeEEEEeeCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAG--ALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVg--SLPKALa~~GhdV~VIlP~Y 321 (405)
||||+++. |+.|++.. .|.++|+++||+|.++.+..
T Consensus 1 MrIl~~~~--------~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~ 38 (416)
T 1rrv_A 1 MRVLLSVC--------GTRGDVEIGVALADRLKALGVQTRMCAPPA 38 (416)
T ss_dssp CEEEEEEE--------SCHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CeEEEEec--------CCCccHHHHHHHHHHHHHCCCeEEEEeCHH
Confidence 89999966 66777754 57889999999999998754
No 28
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=86.44 E-value=0.71 Score=44.23 Aligned_cols=36 Identities=31% Similarity=0.417 Sum_probs=29.9
Q ss_pred ceEEEEecccccccccccHhHHHhh--HHHHHHHCCCeEEEEeeCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGA--LPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgS--LPKALa~~GhdV~VIlP~Y 321 (405)
||||+++. |+.|++.-. |.++|+++||+|.++.+..
T Consensus 1 M~Il~~~~--------~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~ 38 (415)
T 1iir_A 1 MRVLLATC--------GSRGDTEPLVALAVRVRDLGADVRMCAPPD 38 (415)
T ss_dssp CEEEEECC--------SCHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CeEEEEcC--------CCchhHHHHHHHHHHHHHCCCeEEEEcCHH
Confidence 89999864 677888765 7788999999999998864
No 29
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=83.02 E-value=0.75 Score=44.55 Aligned_cols=41 Identities=12% Similarity=0.087 Sum_probs=28.5
Q ss_pred CCCCCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 273 AGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 273 ~~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
.+...||||+|+...+| -..+|- ..-+.+.|+++| +|.|+.
T Consensus 10 ~~~~~MkIl~is~~~~p-~~~~~~---~~~l~~~l~~~G-~V~vi~ 50 (406)
T 2hy7_A 10 SGIRRPCYLVLSSHDFR-TPRRAN---IHFITDQLALRG-TTRFFS 50 (406)
T ss_dssp ---CCSCEEEEESSCTT-SSSCCH---HHHHHHHHHHHS-CEEEEE
T ss_pred CCCCCceEEEEecccCC-Chhhhh---HhHHHHHHHhCC-ceEEEE
Confidence 34456999999998667 333443 345778889999 999993
No 30
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=82.92 E-value=1.5 Score=43.35 Aligned_cols=44 Identities=18% Similarity=0.108 Sum_probs=36.8
Q ss_pred CCCCceEEEEecccccccccccHhHHHhhHHHH--HHHCCCeEEEEeeCC
Q 015531 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKA--LARRGHRVMVVAPHY 321 (405)
Q Consensus 274 ~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKA--La~~GhdV~VIlP~Y 321 (405)
+...|||+||+.-.. .||.+-++..|.+. |.+.|++|.|+.+..
T Consensus 202 ~~~~~rI~~~~~~~~----~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 247 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFG----AHPTGLLTVALFEALQRRQPDLQMHLFATSG 247 (568)
T ss_dssp SSSCEEEEEEESCSS----SSHHHHHHHHHHHHHHHHCTTEEEEEEESSC
T ss_pred CCCCeEEEEECcccc----cChHHHHHHHHHhhccCCcccEEEEEEECCC
Confidence 345799999997653 47899999999999 889999999998753
No 31
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=79.62 E-value=1.8 Score=40.33 Aligned_cols=42 Identities=31% Similarity=0.441 Sum_probs=32.0
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
|+.-+++... |. .||.+.++..|.++|+++||+|.|+.+...
T Consensus 14 ~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~ 55 (394)
T 2jjm_A 14 MKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLP 55 (394)
T ss_dssp -CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred heeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 5544444443 53 699999999999999999999999998654
No 32
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=73.25 E-value=2.9 Score=38.00 Aligned_cols=26 Identities=42% Similarity=0.668 Sum_probs=23.9
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|||=|=+-..|.+.|.++||+|+++.
T Consensus 6 TGatGfIG~~L~~~L~~~G~~V~~l~ 31 (298)
T 4b4o_A 6 GGGTGFIGTALTQLLNARGHEVTLVS 31 (298)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 58888899999999999999999985
No 33
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=71.37 E-value=4.6 Score=31.97 Aligned_cols=33 Identities=30% Similarity=0.635 Sum_probs=24.9
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
+.|+|+++ | .|.+-..+.+.|.+.|++|.++-.
T Consensus 3 ~~m~i~Ii----------G-~G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIA----------G-IGRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp --CEEEEE----------C-CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEE----------C-CCHHHHHHHHHHHhCCCeEEEEEC
Confidence 45777765 3 367777899999999999999865
No 34
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=62.58 E-value=1 Score=49.04 Aligned_cols=116 Identities=12% Similarity=0.096 Sum_probs=71.7
Q ss_pred EEE-EecccccccccccHhHHHhhHHHHH-HHCCCeEEEEeeCCCCCCC-------CCCCc--------eEE---EEEeC
Q 015531 280 VIL-VAAECGPWSKTGGLGDVAGALPKAL-ARRGHRVMVVAPHYGNYAE-------PQDTG--------IRK---RYRVD 339 (405)
Q Consensus 280 ILf-VSSE~aPfaKTGGLGDVVgSLPKAL-a~~GhdV~VIlP~Y~~i~e-------~~~~~--------~~~---~~~~~ 339 (405)
.|| ||-|+.- ||||.=-|+.+=++.+ ++.|-+...|=|....-.. ..+.. +.. ...-.
T Consensus 29 ~lfE~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (725)
T 3nb0_A 29 LLFETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESR 106 (725)
T ss_dssp EEEEEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTT
T ss_pred eEEeeehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHHHHHC
Confidence 566 8888764 9999999999988877 5668899999995432110 00001 000 00012
Q ss_pred CcceEEEEEEEEeCCe-EEEEEeCCCCCCCCCCccc-------------CCCCCHHHHHHHHHHHHHHHHhhcC
Q 015531 340 RQDIEVAYFQAYIDGV-DFVFLDSPLFRHLGNNIYG-------------GGREDILKRMVLFCKAAIEVKFYSR 399 (405)
Q Consensus 340 G~~~~v~V~~~~i~GV-~vYFIdnp~fF~R~~~IYG-------------~~y~DNaeRFafFckAALEll~~L~ 399 (405)
|. .+.+-+=.++|- .++|||-..++.....+|+ +.+.|+++||+|||+|+++.+.+++
T Consensus 107 G~--~v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~s~~~yg~~dd~~~F~y~~~avl~~l~~~~ 178 (725)
T 3nb0_A 107 GV--HFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLD 178 (725)
T ss_dssp TC--CEEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CC--eEEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHHhcC
Confidence 32 222222245554 4667788888754323442 1246889999999999999987654
No 35
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=62.14 E-value=7.4 Score=35.92 Aligned_cols=35 Identities=23% Similarity=0.428 Sum_probs=27.9
Q ss_pred ceEEEEecccccccccccHhHHHhhHH--HHHHHC--CCeEEEEeeC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALP--KALARR--GHRVMVVAPH 320 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLP--KALa~~--GhdV~VIlP~ 320 (405)
||||+|.. ++|||++-.+| ++|+++ |.++.++...
T Consensus 1 mkILii~~--------~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~ 39 (348)
T 1psw_A 1 MKILVIGP--------SWVGDMMMSQSLYRTLQARYPQAIIDVMAPA 39 (348)
T ss_dssp CEEEEECC--------SSHHHHHHHHHHHHHHHHHSTTCEEEEEECG
T ss_pred CeEEEEec--------cccCHHHHHHHHHHHHHHHCCCCEEEEEECc
Confidence 78988644 88999977666 788887 8899888764
No 36
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=55.15 E-value=4.6 Score=40.76 Aligned_cols=34 Identities=29% Similarity=0.620 Sum_probs=29.4
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
|.|||+.+ |.|.|-..|++.|.+.||+|.||=..
T Consensus 2 ~~M~iiI~-----------G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIIL-----------GAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEE-----------CCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEE-----------CCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 78999887 56888899999999999999998554
No 37
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=55.00 E-value=14 Score=33.36 Aligned_cols=38 Identities=29% Similarity=0.501 Sum_probs=30.6
Q ss_pred CCceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEee
Q 015531 276 NVMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIlP 319 (405)
++|+|+.|++ --||.| -++..|+.+|+++|.+|-+|=.
T Consensus 16 ~~~~vI~v~s------~kGGvGKTT~a~nLA~~la~~G~~VlliD~ 55 (262)
T 2ph1_A 16 KIKSRIAVMS------GKGGVGKSTVTALLAVHYARQGKKVGILDA 55 (262)
T ss_dssp TCSCEEEEEC------SSSCTTHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCCeEEEEEc------CCCCCCHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 3578998887 346776 6899999999999999988753
No 38
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=53.27 E-value=13 Score=34.82 Aligned_cols=39 Identities=28% Similarity=0.421 Sum_probs=29.4
Q ss_pred CCCCCCCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 271 pl~~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
+-...++|||.+| |+|-+-..+.+.|++.||+|.++-+.
T Consensus 15 ~~~~~~m~~I~iI-----------G~G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 15 VPRGSHMMEVGFL-----------GLGIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp ---CCCSCEEEEE-----------CCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcccccCCEEEEE-----------CccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3334567898887 46788899999999999999987554
No 39
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=52.89 E-value=14 Score=35.17 Aligned_cols=38 Identities=18% Similarity=0.242 Sum_probs=30.3
Q ss_pred CCceEEEEecccccccccccHhHHHhhHH--HHHHHC--CCeEEEEeeCC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALP--KALARR--GHRVMVVAPHY 321 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLP--KALa~~--GhdV~VIlP~Y 321 (405)
++||||++.. ++|||++-++| ++|++. +.++.+++...
T Consensus 7 ~~~~iLvi~~--------~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~ 48 (349)
T 3tov_A 7 DYKRIVVTFL--------MHLGDVILTTPFLEVLRKAAPHSHITYVIDEK 48 (349)
T ss_dssp TTCEEEEECC--------CCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred CCCEEEEEec--------CcccHHHHHHHHHHHHHHHCCCCEEEEEECcc
Confidence 4579998865 89999999987 678777 78888777654
No 40
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=52.00 E-value=17 Score=32.67 Aligned_cols=37 Identities=38% Similarity=0.532 Sum_probs=30.2
Q ss_pred CCceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEe
Q 015531 276 NVMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIl 318 (405)
..|||+.|++ --||.| -++..|+.+|+++|.+|-+|=
T Consensus 4 ~~~~vI~v~s------~kGGvGKTt~a~~LA~~la~~g~~VlliD 42 (257)
T 1wcv_1 4 AKVRRIALAN------QKGGVGKTTTAINLAAYLARLGKRVLLVD 42 (257)
T ss_dssp -CCCEEEECC------SSCCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEEe------CCCCchHHHHHHHHHHHHHHCCCCEEEEE
Confidence 3588988887 347777 689999999999999998873
No 41
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=51.62 E-value=13 Score=37.07 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=30.4
Q ss_pred CCceEEEEecccccccccccHhHHH--hhHHHHHHHC-CCeEEEEeeCC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVA--GALPKALARR-GHRVMVVAPHY 321 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVV--gSLPKALa~~-GhdV~VIlP~Y 321 (405)
+.|+|++++. ++-|++. -.|.+.|+++ ||+|+++++..
T Consensus 5 ~~~~vl~~p~--------p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 5 KTPHVAIIPS--------PGMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp -CCEEEEECC--------SCHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCcEEEEecC--------cchhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 3478998876 6777775 5788999998 99999998875
No 42
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=50.54 E-value=15 Score=30.98 Aligned_cols=36 Identities=33% Similarity=0.469 Sum_probs=29.3
Q ss_pred ceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEee
Q 015531 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIlP 319 (405)
|||+.|++ --||.| -++..|+.+|+++|.+|-+|=-
T Consensus 1 M~vi~v~s------~kgG~GKTt~a~~la~~la~~g~~vlliD~ 38 (206)
T 4dzz_A 1 MKVISFLN------PKGGSGKTTAVINIATALSRSGYNIAVVDT 38 (206)
T ss_dssp CEEEEECC------SSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CeEEEEEe------CCCCccHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 78888887 346665 5888999999999999988853
No 43
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=49.38 E-value=17 Score=31.84 Aligned_cols=26 Identities=15% Similarity=0.128 Sum_probs=22.9
Q ss_pred HhHHHhhHHHHHHHCCCeEEEEeeCC
Q 015531 296 LGDVAGALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 296 LGDVVgSLPKALa~~GhdV~VIlP~Y 321 (405)
.|.+-..|.+.|.+.|++|.++-..-
T Consensus 8 ~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 8 GETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999997543
No 44
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=49.15 E-value=14 Score=33.44 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=24.7
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
++|||.+|- +|-+-..+...|++.||+|.++-.
T Consensus 2 ~~m~i~iiG-----------~G~~G~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAG-----------AGAMGSRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEEC-----------CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEEC-----------cCHHHHHHHHHHHhCCCcEEEEEC
Confidence 357888763 466668889999999999998754
No 45
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=48.94 E-value=10 Score=35.08 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=25.3
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHC-CCeEEEEee
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARR-GHRVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~-GhdV~VIlP 319 (405)
+|||++|+.+... .|++ ..|.++|.+. ||+|.+++.
T Consensus 5 mmkIl~v~~~~~~---~~~~----~~l~~~L~~~~g~~v~~~~~ 41 (376)
T 1v4v_A 5 MKRVVLAFGTRPE---ATKM----APVYLALRGIPGLKPLVLLT 41 (376)
T ss_dssp CEEEEEEECSHHH---HHHH----HHHHHHHHTSTTEEEEEEEC
T ss_pred ceEEEEEEeccHH---HHHH----HHHHHHHHhCCCCceEEEEc
Confidence 5899999976422 2444 4567778887 799887754
No 46
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=48.89 E-value=22 Score=31.50 Aligned_cols=38 Identities=37% Similarity=0.526 Sum_probs=28.8
Q ss_pred CceEEEEecccccccccc-cHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 277 VMNVILVAAECGPWSKTG-GLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTG-GLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
+|||+.|++ .|-| |=--++..|+.+|+++|.+|-+|=.
T Consensus 1 M~~~I~v~s-----~kgGvGKTt~a~~LA~~la~~g~~VlliD~ 39 (263)
T 1hyq_A 1 MVRTITVAS-----GKGGTGKTTITANLGVALAQLGHDVTIVDA 39 (263)
T ss_dssp -CEEEEEEE-----SSSCSCHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCeEEEEEC-----CCCCCCHHHHHHHHHHHHHhCCCcEEEEEC
Confidence 368888877 3433 3447899999999999999998853
No 47
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=48.61 E-value=25 Score=30.53 Aligned_cols=39 Identities=33% Similarity=0.566 Sum_probs=30.2
Q ss_pred CceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEeeCC
Q 015531 277 VMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIlP~Y 321 (405)
+|||+.|++ .| ||.| -++..|+.+|+++|.+|-+|=.-.
T Consensus 1 M~~~i~v~s-----~k-gGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 1 MGRIISIVS-----GK-GGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEEC-----SS-TTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CceEEEEec-----CC-CCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 368888887 33 4444 689999999999999999986543
No 48
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=47.52 E-value=26 Score=28.60 Aligned_cols=38 Identities=29% Similarity=0.421 Sum_probs=30.1
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
+|||+.+- ++.+|--..++..|.+.|.+.|++|.++-.
T Consensus 1 M~ki~I~y-----~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 38 (148)
T 3f6r_A 1 MSKVLIVF-----GSSTGNTESIAQKLEELIAAGGHEVTLLNA 38 (148)
T ss_dssp -CEEEEEE-----ECSSSHHHHHHHHHHHHHHTTTCEEEEEET
T ss_pred CCeEEEEE-----ECCCchHHHHHHHHHHHHHhCCCeEEEEeh
Confidence 36776553 357899999999999999999999988643
No 49
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=47.30 E-value=17 Score=33.51 Aligned_cols=26 Identities=27% Similarity=0.546 Sum_probs=20.2
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
||=|=+-..|.++|++.|++|.++.-
T Consensus 27 GasG~iG~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 27 GGAGCLGSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TTTSHHHHHHHHHHGGGTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 44444557899999999999998763
No 50
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=47.09 E-value=18 Score=33.36 Aligned_cols=45 Identities=18% Similarity=0.347 Sum_probs=24.2
Q ss_pred CCcCCCCCCCCCCCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 264 TEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 264 ~~~~~~ppl~~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
+...+.+|.....+|+||.. ||=|-+-..|.+.|.+.|++|.++.
T Consensus 8 ~~~~~~~~~~~~~~~~vlVT----------GatG~iG~~l~~~L~~~g~~V~~~~ 52 (333)
T 2q1w_A 8 HHHSSGLVPRGSHMKKVFIT----------GICGQIGSHIAELLLERGDKVVGID 52 (333)
T ss_dssp -------------CCEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCceeeecCCCCEEEEe----------CCccHHHHHHHHHHHHCCCEEEEEE
Confidence 34455666666666776543 5555556788999999999999885
No 51
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=46.70 E-value=19 Score=33.06 Aligned_cols=35 Identities=37% Similarity=0.518 Sum_probs=28.1
Q ss_pred CceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEE
Q 015531 277 VMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VI 317 (405)
+|||+.|++ --||.| -++..|+.+|+++|.+|-+|
T Consensus 3 M~kvI~v~s------~KGGvGKTT~a~nLA~~La~~G~~Vlli 39 (286)
T 2xj4_A 3 ETRVIVVGN------EKGGAGKSTIAVHLVTALLYGGAKVAVI 39 (286)
T ss_dssp -CEEEEECC------SSSCTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEEc------CCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 567888887 346666 68899999999999999876
No 52
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=46.36 E-value=16 Score=33.59 Aligned_cols=42 Identities=24% Similarity=0.290 Sum_probs=24.4
Q ss_pred CCCCCCCCCCCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 267 AKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 267 ~~~ppl~~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
.++++....+.|+||. |||-|-+-..|.++|.+.|++|.++.
T Consensus 9 ~~~~~~~~~~~~~vlV----------tGatG~iG~~l~~~L~~~G~~V~~~~ 50 (347)
T 4id9_A 9 HHSSGLVPRGSHMILV----------TGSAGRVGRAVVAALRTQGRTVRGFD 50 (347)
T ss_dssp ------------CEEE----------ETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCcccccCCCEEEE----------ECCCChHHHHHHHHHHhCCCEEEEEe
Confidence 3444454555677764 36667777899999999999999885
No 53
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=46.31 E-value=22 Score=32.89 Aligned_cols=35 Identities=26% Similarity=0.521 Sum_probs=28.8
Q ss_pred CceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEE
Q 015531 277 VMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VI 317 (405)
.|||++|++ -.||-| -++..|+.+|++.|.+|-+|
T Consensus 81 ~~kvI~vts------~kgG~GKTt~a~nLA~~lA~~G~rVLLI 117 (271)
T 3bfv_A 81 AVQSIVITS------EAPGAGKSTIAANLAVAYAQAGYKTLIV 117 (271)
T ss_dssp CCCEEEEEC------SSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEEC------CCCCCcHHHHHHHHHHHHHhCCCeEEEE
Confidence 478999997 335555 68999999999999999887
No 54
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=45.98 E-value=14 Score=33.96 Aligned_cols=35 Identities=23% Similarity=0.127 Sum_probs=25.1
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCC-eEEEEee
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGH-RVMVVAP 319 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~Gh-dV~VIlP 319 (405)
|||++|+.+..-+ +. +..|.++|+++|+ +|.|++.
T Consensus 1 mkIl~v~~~~~~~---~~----~~~l~~~L~~~g~~~~~v~~~ 36 (384)
T 1vgv_A 1 MKVLTVFGTRPEA---IK----MAPLVHALAKDPFFEAKVCVT 36 (384)
T ss_dssp CEEEEEECSHHHH---HH----HHHHHHHHHHSTTCEEEEEEC
T ss_pred CeEEEEecccHHH---HH----HHHHHHHHHhCCCCceEEEEc
Confidence 8999999874222 21 3568889999995 8887754
No 55
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=45.74 E-value=19 Score=31.09 Aligned_cols=26 Identities=35% Similarity=0.590 Sum_probs=22.4
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
||.|-+-..+.+.|++.|++|.++-.
T Consensus 7 Ga~G~~G~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 7 GGTGNLGKGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp TTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred cCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 66788888999999999999998764
No 56
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=45.70 E-value=23 Score=32.06 Aligned_cols=32 Identities=34% Similarity=0.478 Sum_probs=23.7
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
.|+++||. -+||+| .++.++|++.|++|.++-
T Consensus 21 ~k~~lVTG------as~gIG---~~ia~~l~~~G~~V~~~~ 52 (267)
T 1vl8_A 21 GRVALVTG------GSRGLG---FGIAQGLAEAGCSVVVAS 52 (267)
T ss_dssp TCEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEe
Confidence 46777764 345555 789999999999988764
No 57
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=45.64 E-value=19 Score=32.07 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=24.1
Q ss_pred CCCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 275 ~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
..+.|+++||. |-+-+-.+|.++|++.|++|.++-
T Consensus 19 ~~m~k~vlITG---------as~gIG~~la~~l~~~G~~V~~~~ 53 (251)
T 3orf_A 19 SHMSKNILVLG---------GSGALGAEVVKFFKSKSWNTISID 53 (251)
T ss_dssp ---CCEEEEET---------TTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCEEEEEC---------CCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34457777764 444444789999999999987775
No 58
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=44.26 E-value=30 Score=30.37 Aligned_cols=38 Identities=26% Similarity=0.581 Sum_probs=29.4
Q ss_pred CceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEeeC
Q 015531 277 VMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIlP~ 320 (405)
+|||+.|++ --||.| -++..|+.+|+++|.+|-+|=--
T Consensus 1 M~~vi~v~s------~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 1 MARIIVVTS------GKGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp -CEEEEEEC------SSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEEC------CCCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 468888887 335554 68899999999999999887543
No 59
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=44.14 E-value=23 Score=30.83 Aligned_cols=38 Identities=29% Similarity=0.345 Sum_probs=23.8
Q ss_pred CCCCCCCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 271 pl~~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
+......|+||.. ||=|-+-..|.+.|.++|++|.++.
T Consensus 15 ~~~~l~~~~ilVt----------GatG~iG~~l~~~L~~~G~~V~~~~ 52 (236)
T 3e8x_A 15 ENLYFQGMRVLVV----------GANGKVARYLLSELKNKGHEPVAMV 52 (236)
T ss_dssp ------CCEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCcCCCeEEEE----------CCCChHHHHHHHHHHhCCCeEEEEE
Confidence 3344456777654 4444444688899999999999886
No 60
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=41.66 E-value=39 Score=28.65 Aligned_cols=38 Identities=13% Similarity=0.295 Sum_probs=29.4
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
.+||||.|.. +.+|--.-++..+.+.|.+.|++|.++-
T Consensus 4 ~M~kilii~~-----S~~g~T~~la~~i~~~l~~~g~~v~~~~ 41 (200)
T 2a5l_A 4 SSPYILVLYY-----SRHGATAEMARQIARGVEQGGFEARVRT 41 (200)
T ss_dssp -CCEEEEEEC-----CSSSHHHHHHHHHHHHHHHTTCEEEEEB
T ss_pred CcceEEEEEe-----CCCChHHHHHHHHHHHHhhCCCEEEEEE
Confidence 4579988765 2367778888899999999999998764
No 61
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=41.40 E-value=25 Score=38.41 Aligned_cols=47 Identities=15% Similarity=0.268 Sum_probs=33.7
Q ss_pred CceEEEEecccc-------cccccccHhHHHh--------hHHHHHHHCCCeEE----EEeeCCCC
Q 015531 277 VMNVILVAAECG-------PWSKTGGLGDVAG--------ALPKALARRGHRVM----VVAPHYGN 323 (405)
Q Consensus 277 ~MKILfVSSE~a-------PfaKTGGLGDVVg--------SLPKALa~~GhdV~----VIlP~Y~~ 323 (405)
.|+|+|||.=-+ ...-|||.---|- .|.++|+++||+|. |++-.+..
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~ 343 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPD 343 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTT
T ss_pred eeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCC
Confidence 489999997432 2377888555554 35667788999886 88888754
No 62
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=40.87 E-value=26 Score=30.33 Aligned_cols=25 Identities=36% Similarity=0.594 Sum_probs=19.8
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
||=|-+-..|.+.|+++|++|.++.
T Consensus 8 Gasg~iG~~l~~~L~~~g~~V~~~~ 32 (255)
T 2dkn_A 8 GSASGIGAALKELLARAGHTVIGID 32 (255)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEe
Confidence 5555555788999999999998874
No 63
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=39.78 E-value=31 Score=29.14 Aligned_cols=26 Identities=23% Similarity=0.460 Sum_probs=20.3
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
||=|-+-..|.++|.++|++|.++.-
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 7 GATGRAGSRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCchhHHHHHHHHHhCCCEEEEEEc
Confidence 44445557899999999999998863
No 64
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=38.81 E-value=33 Score=31.52 Aligned_cols=35 Identities=34% Similarity=0.524 Sum_probs=26.5
Q ss_pred ceEEEEecccccccccccHhHHHhhHH--HHHHHC--CCeEEEEeeC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALP--KALARR--GHRVMVVAPH 320 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLP--KALa~~--GhdV~VIlP~ 320 (405)
||||.+ +.++|||++-++| ++|++. +.++.+++..
T Consensus 1 ~~ILii--------~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 39 (326)
T 2gt1_A 1 MRVLIV--------KTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEE 39 (326)
T ss_dssp CEEEEE--------CCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEG
T ss_pred CeEEEE--------eccccchHHhHHHHHHHHHHhCCCCEEEEEEeh
Confidence 788887 4589999976665 577777 7788777754
No 65
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=38.47 E-value=33 Score=29.21 Aligned_cols=26 Identities=35% Similarity=0.580 Sum_probs=20.7
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|||=|-+-..|.++|.++|++|.++.
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~ 31 (224)
T 3h2s_A 6 LGATGRAGSAIVAEARRRGHEVLAVV 31 (224)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EcCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 35555555889999999999999885
No 66
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=38.43 E-value=27 Score=31.35 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=29.1
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
|||++++.-..+. .+. .+....|.++++++|++|.++-|.
T Consensus 2 m~i~il~~~~~~~-~~~--~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANI-NIK--KDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGC-CTT--TCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhC-CcC--CChHHHHHHHHHHCCCEEEEEchh
Confidence 6999998644332 221 244567999999999999999874
No 67
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=38.31 E-value=23 Score=31.68 Aligned_cols=37 Identities=24% Similarity=0.464 Sum_probs=29.3
Q ss_pred CCCceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEe
Q 015531 275 ANVMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 275 ~n~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIl 318 (405)
.+.|+|+.|++ --||.| -++..|+.+|+ +|.+|-+|=
T Consensus 24 ~~~~~vI~v~s------~kGGvGKTT~a~~LA~~la-~g~~VlliD 62 (267)
T 3k9g_A 24 NKKPKIITIAS------IKGGVGKSTSAIILATLLS-KNNKVLLID 62 (267)
T ss_dssp --CCEEEEECC------SSSSSCHHHHHHHHHHHHT-TTSCEEEEE
T ss_pred CCCCeEEEEEe------CCCCchHHHHHHHHHHHHH-CCCCEEEEE
Confidence 34588998887 457777 68889999999 999998883
No 68
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=38.18 E-value=30 Score=31.33 Aligned_cols=40 Identities=13% Similarity=0.201 Sum_probs=31.7
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
|.||.+|||+--..- |=--|+.+|.++|+++|.+|..+=|
T Consensus 2 ~~mk~i~Itgt~t~v----GKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGTDTEV----GKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEESSSSS----CHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeCCCCC----CHHHHHHHHHHHHHHCCCeeEEecc
Confidence 569999999833222 3445899999999999999999876
No 69
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.44 E-value=19 Score=29.52 Aligned_cols=28 Identities=21% Similarity=0.300 Sum_probs=24.1
Q ss_pred cHhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 295 GLGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 295 GLGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
|+|.+-..|.+.|.+.|++|.++-..-.
T Consensus 14 G~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 14 GYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4688899999999999999999987543
No 70
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=37.28 E-value=26 Score=30.99 Aligned_cols=32 Identities=13% Similarity=0.338 Sum_probs=26.0
Q ss_pred CCCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEE
Q 015531 275 ANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 275 ~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VI 317 (405)
+.+|||.+| |.|-+-.+|.+.|++.|++|.++
T Consensus 21 m~mmkI~II-----------G~G~mG~~la~~l~~~g~~V~~v 52 (220)
T 4huj_A 21 QSMTTYAII-----------GAGAIGSALAERFTAAQIPAIIA 52 (220)
T ss_dssp GGSCCEEEE-----------ECHHHHHHHHHHHHHTTCCEEEE
T ss_pred hcCCEEEEE-----------CCCHHHHHHHHHHHhCCCEEEEE
Confidence 345788776 46888899999999999999884
No 71
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=37.03 E-value=46 Score=28.19 Aligned_cols=37 Identities=22% Similarity=0.335 Sum_probs=29.4
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHH-CCCeEEEEe
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALAR-RGHRVMVVA 318 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~-~GhdV~VIl 318 (405)
+||||.|.. +++|--.-++..+.+.|.+ .|++|.++-
T Consensus 1 Mmkilii~~-----S~~g~t~~la~~i~~~l~~~~g~~v~~~~ 38 (198)
T 3b6i_A 1 MAKVLVLYY-----SMYGHIETMARAVAEGASKVDGAEVVVKR 38 (198)
T ss_dssp -CEEEEEEC-----CSSSHHHHHHHHHHHHHHTSTTCEEEEEE
T ss_pred CCeEEEEEe-----CCCcHHHHHHHHHHHHHhhcCCCEEEEEE
Confidence 478888764 3578888889999999998 899998874
No 72
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=36.27 E-value=36 Score=32.16 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=24.1
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEE
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VI 317 (405)
+|||.||.- ||-| +.+|++.|+++|++|.+.
T Consensus 4 ~~~i~~iGi--------Gg~G--ms~~A~~L~~~G~~V~~~ 34 (326)
T 3eag_A 4 MKHIHIIGI--------GGTF--MGGLAAIAKEAGFEVSGC 34 (326)
T ss_dssp CCEEEEESC--------CSHH--HHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEEEE--------CHHH--HHHHHHHHHhCCCEEEEE
Confidence 567887765 7666 557888999999998875
No 73
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=36.11 E-value=35 Score=32.22 Aligned_cols=41 Identities=20% Similarity=0.386 Sum_probs=31.1
Q ss_pred CCCceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEeeCC
Q 015531 275 ANVMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 275 ~n~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIlP~Y 321 (405)
...|+++.|++ --||.| -++.+|+.+|+++|.+|-+|----
T Consensus 10 ~~gm~~i~v~s------gKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 10 NKGKTTFVFIG------GKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp BTTBCEEEEEE------ESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCCeEEEEEe------CCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 34567666665 246666 588999999999999999987654
No 74
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=36.03 E-value=16 Score=33.41 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=24.2
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHC-C-CeEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARR-G-HRVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~-G-hdV~VIlP~ 320 (405)
+.||||+|+.+ .| ..|++. .|.++|+++ | ++|.+++..
T Consensus 7 ~~mkIl~v~~~-~~--~~~~~~----~l~~~L~~~~~~~~v~~~~~~ 46 (375)
T 3beo_A 7 ERLKVMTIFGT-RP--EAIKMA----PLVLELQKHPEKIESIVTVTA 46 (375)
T ss_dssp SCEEEEEEECS-HH--HHHHHH----HHHHHHTTCTTTEEEEEEECC
T ss_pred cCceEEEEecC-cH--HHHHHH----HHHHHHHhCCCCCCeEEEEcC
Confidence 35999999865 33 234544 455566665 4 888777654
No 75
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=35.97 E-value=27 Score=30.84 Aligned_cols=33 Identities=30% Similarity=0.433 Sum_probs=25.5
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
+|||.+| |.|.+-.++.+.|++.|++|.++-..
T Consensus 28 ~~~I~ii-----------G~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGIL-----------GSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEE-----------CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEE-----------ccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4788876 36677788999999999999887543
No 76
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=35.89 E-value=30 Score=30.87 Aligned_cols=26 Identities=27% Similarity=0.323 Sum_probs=20.9
Q ss_pred cHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 295 GLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 295 GLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
|+|-+-..+...|++.||+|.++-..
T Consensus 7 G~G~~G~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 7 GCGALGQLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcCHHHHHHHHHHHhCCCCEEEEEcC
Confidence 34667788999999999999988543
No 77
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=35.49 E-value=33 Score=32.71 Aligned_cols=40 Identities=30% Similarity=0.369 Sum_probs=25.0
Q ss_pred CCCCceEEEEecccccccccccH-hHHHhhHHHHHHHCCCeEEEE
Q 015531 274 GANVMNVILVAAECGPWSKTGGL-GDVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 274 ~~n~MKILfVSSE~aPfaKTGGL-GDVVgSLPKALa~~GhdV~VI 317 (405)
-+..||||+|-+ .|-- +++ +-++...-++|.+.||+|+|+
T Consensus 19 ~m~~MKiLII~a--HP~~--~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 19 YFQSMKVLLIYA--HPEP--RSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp ---CCEEEEEEC--CSCT--TSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhhCCeEEEEEe--CCCC--ccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 356799999875 4542 222 123344567888999999987
No 78
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=35.39 E-value=48 Score=27.99 Aligned_cols=36 Identities=25% Similarity=0.321 Sum_probs=29.0
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|||+.|- ++.+|.=..|+..+.+.|.+.|++|.++-
T Consensus 1 Mkv~IvY-----~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 36 (161)
T 3hly_A 1 MSVLIGY-----LSDYGYSDRLSQAIGRGLVKTGVAVEMVD 36 (161)
T ss_dssp -CEEEEE-----CTTSTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEEE-----ECCChHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 6766553 46789999999999999999999988763
No 79
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=35.34 E-value=34 Score=32.17 Aligned_cols=47 Identities=15% Similarity=0.273 Sum_probs=25.6
Q ss_pred CCCcCCCCCCCCCCCceEEEEecccccccccccHhHHHhhHHHHHHHC-CC-eEEEEe
Q 015531 263 KTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARR-GH-RVMVVA 318 (405)
Q Consensus 263 ~~~~~~~ppl~~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~-Gh-dV~VIl 318 (405)
+++.+++++.+..-.+|.++|| ||-|-+-..|.+.|.+. |+ +|.++.
T Consensus 6 ~~~~~~~~~~~~~~~~k~vlVT---------GatG~iG~~l~~~L~~~~g~~~V~~~~ 54 (344)
T 2gn4_A 6 HHGSMSMPNHQNMLDNQTILIT---------GGTGSFGKCFVRKVLDTTNAKKIIVYS 54 (344)
T ss_dssp ----------CCTTTTCEEEEE---------TTTSHHHHHHHHHHHHHCCCSEEEEEE
T ss_pred CCCCCCCccHHHhhCCCEEEEE---------CCCcHHHHHHHHHHHhhCCCCEEEEEE
Confidence 3455666666665333444454 56666668899999999 97 888864
No 80
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=34.74 E-value=46 Score=28.50 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=24.2
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHH-HCCCeEEEEee
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALA-RRGHRVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa-~~GhdV~VIlP 319 (405)
+||.++|+ ||=|-+-..|.+.|+ +.|++|.++.-
T Consensus 4 mmk~vlVt---------Gasg~iG~~~~~~l~~~~g~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITIL---------GAAGQIAQXLTATLLTYTDMHITLYGR 38 (221)
T ss_dssp SCSEEEEE---------STTSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred eEEEEEEE---------eCCcHHHHHHHHHHHhcCCceEEEEec
Confidence 47755555 444444478899999 89999988753
No 81
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=34.43 E-value=46 Score=30.07 Aligned_cols=44 Identities=14% Similarity=0.103 Sum_probs=34.2
Q ss_pred eEEEEeccccccc---------ccccHhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 279 NVILVAAECGPWS---------KTGGLGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 279 KILfVSSE~aPfa---------KTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
+|++++|-..-.. -=+||-=.+.+|+..|+..|.+|..|.|.+=
T Consensus 141 ~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i 193 (256)
T 4fs3_A 141 SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPI 193 (256)
T ss_dssp EEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred EEEEEeccccccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCC
Confidence 5888888644221 1236888899999999999999999999874
No 82
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=34.03 E-value=30 Score=30.17 Aligned_cols=32 Identities=19% Similarity=0.411 Sum_probs=22.3
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
||+++|| ||=+-+-.++.+.|++.|++|.++-
T Consensus 1 Mk~vlVT---------Gas~gIG~~~a~~l~~~G~~V~~~~ 32 (230)
T 3guy_A 1 MSLIVIT---------GASSGLGAELAKLYDAEGKATYLTG 32 (230)
T ss_dssp --CEEEE---------STTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEe---------cCCchHHHHHHHHHHHCCCEEEEEe
Confidence 6666665 4444455789999999999987764
No 83
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=33.38 E-value=76 Score=25.79 Aligned_cols=26 Identities=38% Similarity=0.492 Sum_probs=20.3
Q ss_pred hHHHhhHHHHHHHCCCeEEEEeeCCCC
Q 015531 297 GDVAGALPKALARRGHRVMVVAPHYGN 323 (405)
Q Consensus 297 GDVVgSLPKALa~~GhdV~VIlP~Y~~ 323 (405)
.++..+|-.| +++|++|+|+++....
T Consensus 40 ~~i~~aL~~a-~~rGV~Vril~~~~~~ 65 (155)
T 1byr_A 40 PDIMKALVAA-KKRGVDVKIVIDERGN 65 (155)
T ss_dssp HHHHHHHHHH-HHTTCEEEEEEESTTC
T ss_pred HHHHHHHHHH-HHCCCEEEEEEeCccc
Confidence 4566777665 4689999999999875
No 84
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=33.30 E-value=27 Score=31.10 Aligned_cols=36 Identities=22% Similarity=0.485 Sum_probs=27.4
Q ss_pred CCCCceEEEEecccccccccccHhHHHhhHHHHHHHCC----CeEEEEeeC
Q 015531 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRG----HRVMVVAPH 320 (405)
Q Consensus 274 ~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~G----hdV~VIlP~ 320 (405)
|++.|||.+| |+|-+-.++.+.|++.| ++|.++-+.
T Consensus 1 ~m~~m~i~ii-----------G~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 1 GMENIKLGFM-----------GLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp CCSSSCEEEE-----------CCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCCCCEEEEE-----------CcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3456888877 45777788899999999 799887544
No 85
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=33.08 E-value=41 Score=29.48 Aligned_cols=32 Identities=28% Similarity=0.590 Sum_probs=23.4
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
||+++||. -+||+| .++.+.|+++|++|.++-
T Consensus 1 mk~vlVTG------as~gIG---~~~a~~l~~~G~~V~~~~ 32 (257)
T 1fjh_A 1 MSIIVISG------CATGIG---AATRKVLEAAGHQIVGID 32 (257)
T ss_dssp CCEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeC------CCCHHH---HHHHHHHHHCCCEEEEEe
Confidence 66777764 245554 678999999999988764
No 86
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=32.67 E-value=36 Score=29.57 Aligned_cols=38 Identities=26% Similarity=0.316 Sum_probs=29.8
Q ss_pred CCceEEEEecccccccccccHh--HHHhhHHHHHHHC-CCeEEEEee
Q 015531 276 NVMNVILVAAECGPWSKTGGLG--DVAGALPKALARR-GHRVMVVAP 319 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~-GhdV~VIlP 319 (405)
++|||+.|++ --||.| -++..|+.+|+++ |.+|-+|=-
T Consensus 2 ~~~~vI~v~s------~kGGvGKTt~a~~LA~~la~~~g~~VlliD~ 42 (245)
T 3ea0_A 2 NAKRVFGFVS------AKGGDGGSCIAANFAFALSQEPDIHVLAVDI 42 (245)
T ss_dssp -CCEEEEEEE------SSTTSSHHHHHHHHHHHHTTSTTCCEEEEEC
T ss_pred CCCeEEEEEC------CCCCcchHHHHHHHHHHHHhCcCCCEEEEEC
Confidence 4688998887 346665 5788999999999 999988854
No 87
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=32.46 E-value=59 Score=30.42 Aligned_cols=36 Identities=19% Similarity=0.393 Sum_probs=29.0
Q ss_pred CceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEe
Q 015531 277 VMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIl 318 (405)
.+||++|++ -.||-| -++..|+.+|++.|.+|-+|=
T Consensus 103 ~~kvI~vts------~kgG~GKTtva~nLA~~lA~~G~rVLLID 140 (299)
T 3cio_A 103 ENNILMITG------ATPDSGKTFVSSTLAAVIAQSDQKVLFID 140 (299)
T ss_dssp SCCEEEEEE------SSSSSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEEC------CCCCCChHHHHHHHHHHHHhCCCcEEEEE
Confidence 368999987 334444 699999999999999998884
No 88
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=32.13 E-value=70 Score=27.59 Aligned_cols=38 Identities=18% Similarity=0.122 Sum_probs=30.7
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
.+||||.|.. .| +|--.-++..+.+.|.+.|++|.++-
T Consensus 5 ~mmkilii~~--S~---~g~T~~la~~i~~~l~~~g~~v~~~~ 42 (211)
T 1ydg_A 5 APVKLAIVFY--SS---TGTGYAMAQEAAEAGRAAGAEVRLLK 42 (211)
T ss_dssp CCCEEEEEEC--CS---SSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEEE--CC---CChHHHHHHHHHHHHhcCCCEEEEEe
Confidence 3589998876 33 67778888899999999999998875
No 89
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=32.04 E-value=45 Score=28.47 Aligned_cols=28 Identities=36% Similarity=0.438 Sum_probs=22.9
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
|||=|-+-..|.++|.+.|++|.++.-.
T Consensus 10 tGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 10 IGASGFVGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp ETCCHHHHHHHHHHHHTTTCEEEEECSC
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 3666777789999999999999988643
No 90
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=31.96 E-value=71 Score=24.89 Aligned_cols=44 Identities=14% Similarity=0.081 Sum_probs=30.8
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHC-CC-eEEEEeeCCCCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARR-GH-RVMVVAPHYGNY 324 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~-Gh-dV~VIlP~Y~~i 324 (405)
||+++|-. -.|+. ..-+..+-.+..+++++ |+ +|.|++=..+-.
T Consensus 2 ~k~~ii~~-~~p~~--~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~ 47 (117)
T 1jx7_A 2 QKIVIVAN-GAPYG--SESLFNSLRLAIALREQESNLDLRLFLMSDAVT 47 (117)
T ss_dssp CEEEEEEC-CCTTT--CSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGG
T ss_pred cEEEEEEc-CCCCC--cHHHHHHHHHHHHHHhcCCCccEEEEEEchHHH
Confidence 47777665 34552 23456677888888888 99 999998776643
No 91
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=31.81 E-value=24 Score=31.63 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=24.4
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
||+++||. -+|||| ..|.+.|+++|++|.++.
T Consensus 3 ~k~vlVTG------asg~IG---~~la~~L~~~G~~V~~~~ 34 (267)
T 3rft_A 3 MKRLLVTG------AAGQLG---RVMRERLAPMAEILRLAD 34 (267)
T ss_dssp EEEEEEES------TTSHHH---HHHHHHTGGGEEEEEEEE
T ss_pred CCEEEEEC------CCCHHH---HHHHHHHHhcCCEEEEEe
Confidence 56777765 456666 678899999999988765
No 92
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=31.67 E-value=48 Score=30.65 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=31.1
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
.+||.+||++--.-- |---|+.+|.++|+++|.+|..+=|
T Consensus 19 ~m~k~i~ItgT~t~v----GKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 19 FQGHMLFISATNTNA----GKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CCCEEEEEEESSTTS----SHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hcCcEEEEEeCCCCC----cHHHHHHHHHHHHHhCCCceEEEee
Confidence 357999999832221 3445899999999999999999876
No 93
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=31.40 E-value=53 Score=26.90 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=29.4
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEE
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VI 317 (405)
|||+.+ -++.||-=..++..|.+.|.+.|++|.++
T Consensus 2 ~ki~I~-----Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~ 36 (147)
T 2hna_A 2 ADITLI-----SGSTLGGAEYVAEHLAEKLEEAGFTTETL 36 (147)
T ss_dssp CSEEEE-----CCTTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEE-----EECCchHHHHHHHHHHHHHHHCCCceEEe
Confidence 566654 35789999999999999999999998875
No 94
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=31.30 E-value=27 Score=28.07 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=21.3
Q ss_pred HhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 296 LGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 296 LGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
.|.+-..|.+.|.+.|++|.++-..
T Consensus 14 ~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 14 SEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCHHHHHHHHHHHHCCCeEEEEECC
Confidence 3778889999999999999998653
No 95
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=31.05 E-value=51 Score=32.61 Aligned_cols=39 Identities=26% Similarity=0.330 Sum_probs=28.6
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCC
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y 321 (405)
.++|+++.. |. .|=---+-.|.+.|+++||+|+++++-.
T Consensus 8 ~~~vl~~p~---p~---~GHi~P~l~La~~L~~rG~~VT~v~t~~ 46 (482)
T 2pq6_A 8 KPHVVMIPY---PV---QGHINPLFKLAKLLHLRGFHITFVNTEY 46 (482)
T ss_dssp CCEEEEECC---SS---HHHHHHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred CCEEEEecC---cc---chhHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 368999875 22 3333345678899999999999998875
No 96
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=30.71 E-value=45 Score=31.98 Aligned_cols=35 Identities=29% Similarity=0.499 Sum_probs=28.8
Q ss_pred ceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIl 318 (405)
|||+.|++ --||.| -++..|+.+|+++|.+|-+|=
T Consensus 1 MkvIav~s------~KGGvGKTT~a~nLA~~LA~~G~rVLlID 37 (361)
T 3pg5_A 1 MRTISFFN------NKGGVGKTTLSTNVAHYFALQGKRVLYVD 37 (361)
T ss_dssp CEEEEBCC------SSCCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEEc------CCCCCcHHHHHHHHHHHHHhCCCcEEEEE
Confidence 78888877 457777 578889999999999998883
No 97
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=30.60 E-value=40 Score=34.35 Aligned_cols=37 Identities=30% Similarity=0.578 Sum_probs=30.7
Q ss_pred CceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEeeC
Q 015531 277 VMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIlP~ 320 (405)
.++|+|++. | ||.| -++.+|+.+|+++|.+|-+|---
T Consensus 7 ~~~i~~~sg------k-GGvGKTT~a~~lA~~lA~~G~rVLlvd~D 45 (589)
T 1ihu_A 7 IPPYLFFTG------K-GGVGKTSISCATAIRLAEQGKRVLLVSTD 45 (589)
T ss_dssp CCSEEEEEC------S-TTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCEEEEEeC------C-CcCHHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 367888876 6 8898 58999999999999999887643
No 98
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=30.49 E-value=22 Score=32.15 Aligned_cols=32 Identities=34% Similarity=0.598 Sum_probs=22.6
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
++|||.+| |+|-+-..+.+.|++.|++|.++-
T Consensus 2 ~~m~i~ii-----------G~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFI-----------GLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEEC-----------CCSTTHHHHHHHHHHTTCEEEECC
T ss_pred CCCEEEEE-----------ccCHHHHHHHHHHHhCCCEEEEEc
Confidence 44777665 356666788889999999987654
No 99
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=30.33 E-value=34 Score=31.70 Aligned_cols=28 Identities=18% Similarity=0.154 Sum_probs=22.5
Q ss_pred cccHhHHHhhHHHHHHHC-CCeEEEEeeC
Q 015531 293 TGGLGDVAGALPKALARR-GHRVMVVAPH 320 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~-GhdV~VIlP~ 320 (405)
|||-|-+-..|.++|.+. |++|.++.-.
T Consensus 30 tGatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 30 LGVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp ESCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred ECCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 366666678999999998 9999998743
No 100
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=30.31 E-value=75 Score=29.83 Aligned_cols=26 Identities=27% Similarity=0.388 Sum_probs=20.5
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
||=|=+-..|.++|.+.|++|.++.-
T Consensus 36 GatG~iG~~l~~~L~~~g~~V~~~~r 61 (379)
T 2c5a_A 36 GAGGFIASHIARRLKHEGHYVIASDW 61 (379)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCccHHHHHHHHHHHHCCCeEEEEEC
Confidence 55555557889999999999998763
No 101
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=30.29 E-value=45 Score=28.66 Aligned_cols=33 Identities=33% Similarity=0.536 Sum_probs=26.0
Q ss_pred ceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIl 318 (405)
|||.+ +. -||.| -++..|+.+|+++|.+|-+|=
T Consensus 1 mkI~v-s~-------kGGvGKTt~a~~LA~~la~~g~~VlliD 35 (254)
T 3kjh_A 1 MKLAV-AG-------KGGVGKTTVAAGLIKIMASDYDKIYAVD 35 (254)
T ss_dssp CEEEE-EC-------SSSHHHHHHHHHHHHHHTTTCSCEEEEE
T ss_pred CEEEE-ec-------CCCCCHHHHHHHHHHHHHHCCCeEEEEe
Confidence 67665 32 47777 588899999999999998883
No 102
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=30.13 E-value=63 Score=26.12 Aligned_cols=36 Identities=25% Similarity=0.220 Sum_probs=28.8
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|||+.|- ++.+|-=..++..|.+.|.+.|++|.++-
T Consensus 1 mki~iiy-----~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~ 36 (147)
T 1f4p_A 1 PKALIVY-----GSTTGNTEYTAETIARELADAGYEVDSRD 36 (147)
T ss_dssp CEEEEEE-----ECSSSHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CeEEEEE-----ECCcCHHHHHHHHHHHHHHhcCCeeEEEe
Confidence 6776653 35678888999999999999999998763
No 103
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=30.02 E-value=43 Score=31.01 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=24.2
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
.|||.+|- +|-+-..+...|++.|++|.++-.
T Consensus 4 ~mki~iiG-----------~G~~G~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLG-----------LGNGGHAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEEC-----------CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEEC-----------CCHHHHHHHHHHHhCCCEEEEEeC
Confidence 47888763 455557788899999999988754
No 104
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=29.37 E-value=94 Score=25.44 Aligned_cols=44 Identities=30% Similarity=0.360 Sum_probs=31.4
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeE-EEEeeCCCCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRV-MVVAPHYGNY 324 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV-~VIlP~Y~~i 324 (405)
||+++|-. -.|+- .--+.-+-.+..++.++||+| .|++=.-+-.
T Consensus 1 mk~~iiv~-~~p~~--~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~ 45 (130)
T 2hy5_A 1 MKFALQIN-EGPYQ--HQASDSAYQFAKAALEKGHEIFRVFFYHDGVN 45 (130)
T ss_dssp CEEEEEEC-SCTTT--STHHHHHHHHHHHHHHTTCEEEEEEECGGGGG
T ss_pred CEEEEEEe-CCCCC--cHHHHHHHHHHHHHHhcCCeeCEEEEechHHH
Confidence 67777653 34551 235677788899999999999 9888666643
No 105
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=29.36 E-value=43 Score=29.75 Aligned_cols=33 Identities=30% Similarity=0.558 Sum_probs=26.5
Q ss_pred ceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEE
Q 015531 278 MNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VI 317 (405)
|||+.|+. -||.| -++..|+.+|+++|++|-+|
T Consensus 1 M~vI~vs~-------KGGvGKTT~a~nLA~~la~~G~~Vlli 35 (269)
T 1cp2_A 1 MRQVAIYG-------KGGIGKSTTTQNLTSGLHAMGKTIMVV 35 (269)
T ss_dssp CEEEEEEE-------CTTSSHHHHHHHHHHHHHTTTCCEEEE
T ss_pred CcEEEEec-------CCCCcHHHHHHHHHHHHHHCCCcEEEE
Confidence 67777732 37777 68889999999999999886
No 106
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=29.34 E-value=85 Score=28.79 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=22.5
Q ss_pred eEEEEecccccccccc--cHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 279 NVILVAAECGPWSKTG--GLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 279 KILfVSSE~aPfaKTG--GLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|+++||. -+| |+| .++.++|++.|++|.++-
T Consensus 31 k~vlVTG------asg~~GIG---~~ia~~la~~G~~V~~~~ 63 (296)
T 3k31_A 31 KKGVIIG------VANDKSLA---WGIAKAVCAQGAEVALTY 63 (296)
T ss_dssp CEEEEEC------CCSTTSHH---HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEe------CCCCCCHH---HHHHHHHHHCCCEEEEEe
Confidence 6777765 222 665 578999999999987763
No 107
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=29.07 E-value=71 Score=28.88 Aligned_cols=45 Identities=16% Similarity=0.133 Sum_probs=30.1
Q ss_pred CceEEEEecccc-cccc----ccc-HhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 277 VMNVILVAAECG-PWSK----TGG-LGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 277 ~MKILfVSSE~a-PfaK----TGG-LGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
++|||+|.+.+. .|.. +|= +-|+++ .-..|.+.|++|.++.|.=+
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~-p~~vl~~ag~~v~~~s~~g~ 53 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALH-PFNTFRKEGFEVDFVSETGK 53 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHH-HHHHHHHTTCEEEEECSSSC
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHH-HHHHHHHCCCEEEEECCCCC
Confidence 468999998765 5544 332 234433 34567788999999999644
No 108
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=29.03 E-value=28 Score=32.37 Aligned_cols=26 Identities=23% Similarity=0.543 Sum_probs=23.9
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
||+|-+-++|.+.|++.|++|.++-+
T Consensus 28 Gg~G~mG~~la~~l~~~G~~V~~~~~ 53 (298)
T 2pv7_A 28 GGYGKLGGLFARYLRASGYPISILDR 53 (298)
T ss_dssp TTTSHHHHHHHHHHHTTTCCEEEECT
T ss_pred cCCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 78999999999999999999998864
No 109
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=28.44 E-value=58 Score=29.98 Aligned_cols=30 Identities=30% Similarity=0.587 Sum_probs=22.7
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEE
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VI 317 (405)
.|||+.|-+ |++=. .|+-+|++.|++|.|+
T Consensus 1 sm~V~IVGa---------GpaGl--~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGA---------GIGGT--CLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECC---------SHHHH--HHHHHHHHTTCEEEEE
T ss_pred CCEEEEECc---------CHHHH--HHHHHHHhCCCCEEEE
Confidence 489999875 44333 3566899999999998
No 110
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=28.21 E-value=62 Score=29.73 Aligned_cols=38 Identities=13% Similarity=-0.030 Sum_probs=27.3
Q ss_pred ceEEEEecccccccccccHhHH--HhhHHHHHHHCCCeEEEEeeCCCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDV--AGALPKALARRGHRVMVVAPHYGN 323 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDV--VgSLPKALa~~GhdV~VIlP~Y~~ 323 (405)
+||++.-+ ||.+-. +-.|-+.|.+.|++|+|||=.-..
T Consensus 6 k~IllgiT--------Gsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 6 KRIGFGFT--------GSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CEEEEEEC--------SCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CEEEEEEE--------ChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 56766443 776655 568889999999999999866543
No 111
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=28.11 E-value=44 Score=28.58 Aligned_cols=26 Identities=27% Similarity=0.350 Sum_probs=20.9
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
||=|-+-..|.++|.+.|++|.++.=
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~R 32 (219)
T 3dqp_A 7 GSTGRVGKSLLKSLSTTDYQIYAGAR 32 (219)
T ss_dssp STTSHHHHHHHHHHTTSSCEEEEEES
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 55555558999999999999998863
No 112
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=27.87 E-value=35 Score=28.02 Aligned_cols=26 Identities=27% Similarity=0.266 Sum_probs=23.3
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
|+ |.+...|.+.|.+.|++|.++-+.
T Consensus 10 G~-G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 10 GH-SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CC-SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CC-CHHHHHHHHHHHHCCCCEEEEECC
Confidence 54 888999999999999999999875
No 113
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=27.78 E-value=59 Score=27.91 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=27.0
Q ss_pred eEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEee
Q 015531 279 NVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 279 KILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIlP 319 (405)
|+++|++ --||.| -++..|+.+|+++|.+|-++=|
T Consensus 2 k~I~v~s------~kgGvGKTt~a~nLa~~la~~G~rVll~dp 38 (224)
T 1byi_A 2 KRYFVTG------TDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEE------SSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEE------CCCCCCHHHHHHHHHHHHHHCCCCEEEEcc
Confidence 5777776 234454 6889999999999999998754
No 114
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=27.76 E-value=42 Score=33.25 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=30.7
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
..+||.|| |-+.-|+.+|-.+|+..|.+|+++.|.
T Consensus 178 ~glkva~v----------GD~~nva~Sl~~~~~~~G~~v~~~~P~ 212 (340)
T 4ep1_A 178 KGIKLAYV----------GDGNNVCHSLLLASAKVGMHMTVATPV 212 (340)
T ss_dssp TTCEEEEE----------SCCCHHHHHHHHHHHHHTCEEEEECCT
T ss_pred CCCEEEEE----------CCCchhHHHHHHHHHHcCCEEEEECCc
Confidence 45789988 555789999999999999999999996
No 115
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=27.43 E-value=59 Score=28.60 Aligned_cols=22 Identities=23% Similarity=0.283 Sum_probs=17.2
Q ss_pred hHHHhhHHHHHHHCCCeEEEEe
Q 015531 297 GDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 297 GDVVgSLPKALa~~GhdV~VIl 318 (405)
+-+-.++.++|++.|++|.++-
T Consensus 26 ~giG~~ia~~l~~~G~~V~~~~ 47 (271)
T 3ek2_A 26 RSIAYGIAKACKREGAELAFTY 47 (271)
T ss_dssp TSHHHHHHHHHHHTTCEEEEEE
T ss_pred CcHHHHHHHHHHHcCCCEEEEe
Confidence 3344789999999999987764
No 116
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=27.20 E-value=56 Score=27.45 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=18.9
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
||=|-+-.+|.+.|+ +|++|.++--
T Consensus 10 Gasg~iG~~~~~~l~-~g~~V~~~~r 34 (202)
T 3d7l_A 10 GASGTLGSAVKERLE-KKAEVITAGR 34 (202)
T ss_dssp TTTSHHHHHHHHHHT-TTSEEEEEES
T ss_pred cCCcHHHHHHHHHHH-CCCeEEEEec
Confidence 555555578899999 9999988753
No 117
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=26.88 E-value=29 Score=32.46 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=26.2
Q ss_pred CCCCCCCceEEEEecccccccccccHhHHHhhHHHHHHHCC-------CeEEEEeeC
Q 015531 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRG-------HRVMVVAPH 320 (405)
Q Consensus 271 pl~~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~G-------hdV~VIlP~ 320 (405)
|+..+..|||.+|- +|-+-+++...|++.| ++|.++-..
T Consensus 2 ~~~~m~~mkI~iIG-----------~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 2 PLGSMASKKVCIVG-----------SGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp -----CCEEEEEEC-----------CSHHHHHHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred CCcccCCCeEEEEC-----------CCHHHHHHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 34445568888874 4666678888999999 999988653
No 118
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=26.65 E-value=62 Score=30.62 Aligned_cols=32 Identities=31% Similarity=0.588 Sum_probs=25.8
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCC--eEEEEee
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGH--RVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~Gh--dV~VIlP 319 (405)
.|||.+| |+|-+-++|.+.|++.|+ +|.++-+
T Consensus 33 ~~kI~II-----------G~G~mG~slA~~l~~~G~~~~V~~~dr 66 (314)
T 3ggo_A 33 MQNVLIV-----------GVGFMGGSFAKSLRRSGFKGKIYGYDI 66 (314)
T ss_dssp CSEEEEE-----------SCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEE-----------eeCHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 4677766 378888999999999999 8877654
No 119
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=26.62 E-value=50 Score=31.00 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=26.8
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
..|||.+| |+|-+-..+.+.|++.|++|.++-+.
T Consensus 30 ~~~~I~iI-----------G~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFL-----------GTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEE-----------CCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEE-----------CccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 45888887 45666688999999999999987543
No 120
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=26.52 E-value=58 Score=29.48 Aligned_cols=26 Identities=27% Similarity=0.402 Sum_probs=20.7
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|||=|=+-..|.++|.+.|++|.++.
T Consensus 7 TGatG~iG~~l~~~L~~~g~~V~~~~ 32 (347)
T 1orr_A 7 TGGCGFLGSNLASFALSQGIDLIVFD 32 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eCCCchhHHHHHHHHHhCCCEEEEEe
Confidence 35555566889999999999999874
No 121
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=26.50 E-value=41 Score=31.03 Aligned_cols=26 Identities=31% Similarity=0.395 Sum_probs=24.1
Q ss_pred HhHHHhhHHHHHHHCCCeEEEEeeCC
Q 015531 296 LGDVAGALPKALARRGHRVMVVAPHY 321 (405)
Q Consensus 296 LGDVVgSLPKALa~~GhdV~VIlP~Y 321 (405)
.|.|+....+.|.+.|.+|.||-|..
T Consensus 39 gG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 39 GGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 48999999999999999999999965
No 122
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=26.16 E-value=72 Score=31.68 Aligned_cols=40 Identities=23% Similarity=0.271 Sum_probs=32.3
Q ss_pred CCCCCCCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 271 pl~~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
++.+-..+||.+|. -+.-|+.+|-.+|++.|.+|+++.|.
T Consensus 182 ~~~~l~glkva~vG----------D~~nva~Sl~~~l~~lG~~v~~~~P~ 221 (353)
T 3sds_A 182 SSLGLEGLKIAWVG----------DANNVLFDLAIAATKMGVNVAVATPR 221 (353)
T ss_dssp TCCSCTTCEEEEES----------CCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred cccccCCCEEEEEC----------CCchHHHHHHHHHHHcCCEEEEECCc
Confidence 44444668998863 34569999999999999999999996
No 123
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=25.91 E-value=57 Score=29.91 Aligned_cols=26 Identities=42% Similarity=0.571 Sum_probs=20.6
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
||=|-+-..|.++|.+.|++|.++.-
T Consensus 34 GatG~iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 34 GGAGFVGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 55555568899999999999998853
No 124
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=25.79 E-value=52 Score=30.93 Aligned_cols=32 Identities=34% Similarity=0.482 Sum_probs=25.0
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
.|||.+|-+ | -+-+.|...|++.|++|.++..
T Consensus 3 ~mkI~IiGa--------G---~~G~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGA--------G---AVGGYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CCCEEEESC--------C---HHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEECc--------C---HHHHHHHHHHHHCCCEEEEEEC
Confidence 478888754 4 4557788899999999999875
No 125
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=25.77 E-value=61 Score=30.10 Aligned_cols=25 Identities=24% Similarity=0.268 Sum_probs=19.8
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
||=|=+-..|.++|.+.|++|.++.
T Consensus 31 GatG~iG~~l~~~L~~~g~~V~~~~ 55 (375)
T 1t2a_A 31 GITGQDGSYLAEFLLEKGYEVHGIV 55 (375)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEE
Confidence 4445555788999999999999875
No 126
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=25.73 E-value=66 Score=29.41 Aligned_cols=35 Identities=29% Similarity=0.484 Sum_probs=28.3
Q ss_pred CceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEe
Q 015531 277 VMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIl 318 (405)
.|+|+.|+. -||.| -++..|+.+|+++|.+|-+|=
T Consensus 40 ~~~vI~v~~-------KGGvGKTT~a~nLA~~La~~G~~VlliD 76 (307)
T 3end_A 40 GAKVFAVYG-------KGGIGKSTTSSNLSAAFSILGKRVLQIG 76 (307)
T ss_dssp CCEEEEEEC-------STTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEEC-------CCCccHHHHHHHHHHHHHHCCCeEEEEe
Confidence 478888762 36666 588999999999999998883
No 127
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=25.56 E-value=59 Score=28.63 Aligned_cols=33 Identities=27% Similarity=0.303 Sum_probs=23.9
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCC---CeEEEEee
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRG---HRVMVVAP 319 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~G---hdV~VIlP 319 (405)
||+++|| ||-+-+-.+|.+.|++.| ++|.++.-
T Consensus 21 ~k~vlIT---------GasggIG~~la~~L~~~G~~~~~V~~~~r 56 (267)
T 1sny_A 21 MNSILIT---------GCNRGLGLGLVKALLNLPQPPQHLFTTCR 56 (267)
T ss_dssp CSEEEES---------CCSSHHHHHHHHHHHTSSSCCSEEEEEES
T ss_pred CCEEEEE---------CCCCcHHHHHHHHHHhcCCCCcEEEEEec
Confidence 5566665 444444578999999999 88887753
No 128
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=25.48 E-value=67 Score=27.83 Aligned_cols=32 Identities=31% Similarity=0.494 Sum_probs=23.6
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
||+++|| ||-+-+-.++.+.|++.|++|.++-
T Consensus 2 ~k~vlIT---------Gas~gIG~~ia~~l~~~G~~V~~~~ 33 (235)
T 3l77_A 2 MKVAVIT---------GASRGIGEAIARALARDGYALALGA 33 (235)
T ss_dssp CCEEEEE---------SCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEE---------CCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 6777776 4444445789999999999987764
No 129
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=25.46 E-value=47 Score=30.19 Aligned_cols=31 Identities=32% Similarity=0.456 Sum_probs=23.6
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHC-----C-CeEEEEee
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARR-----G-HRVMVVAP 319 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~-----G-hdV~VIlP 319 (405)
|||.+|- +|-+-+.|...|++. | |+|.++-.
T Consensus 9 m~I~iiG-----------~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFG-----------LGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEEC-----------CSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEEC-----------cCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 7888874 444457888888888 9 99998753
No 130
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=25.44 E-value=48 Score=28.95 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=24.4
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCC-CeEEEEe
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRG-HRVMVVA 318 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~G-hdV~VIl 318 (405)
+||.++||. -+||+| ..|.++|++.| ++|.++.
T Consensus 22 ~mk~vlVtG------atG~iG---~~l~~~L~~~G~~~V~~~~ 55 (236)
T 3qvo_A 22 HMKNVLILG------AGGQIA---RHVINQLADKQTIKQTLFA 55 (236)
T ss_dssp CCEEEEEET------TTSHHH---HHHHHHHTTCTTEEEEEEE
T ss_pred cccEEEEEe------CCcHHH---HHHHHHHHhCCCceEEEEE
Confidence 466666663 345555 78899999999 8998875
No 131
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=25.30 E-value=72 Score=30.54 Aligned_cols=36 Identities=25% Similarity=0.401 Sum_probs=28.1
Q ss_pred CceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEe
Q 015531 277 VMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIl 318 (405)
.|+++.|++ --||.| -++.+|+.+|+++|.+|-+|-
T Consensus 24 ~~~~i~v~s------gKGGvGKTTvA~~LA~~lA~~G~rVLlvD 61 (349)
T 3ug7_A 24 DGTKYIMFG------GKGGVGKTTMSAATGVYLAEKGLKVVIVS 61 (349)
T ss_dssp CSCEEEEEE------CSSSTTHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred CCCEEEEEe------CCCCccHHHHHHHHHHHHHHCCCeEEEEe
Confidence 355665555 347777 588999999999999999987
No 132
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=25.27 E-value=77 Score=27.08 Aligned_cols=37 Identities=16% Similarity=0.283 Sum_probs=29.3
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHH-CCCeEEEEe
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALAR-RGHRVMVVA 318 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~-~GhdV~VIl 318 (405)
+|||+.|-. +++|--..++..+.+.|.+ .|++|.++-
T Consensus 4 M~kiliiy~-----S~~GnT~~~a~~i~~~l~~~~g~~v~~~~ 41 (188)
T 2ark_A 4 MGKVLVIYD-----TRTGNTKKMAELVAEGARSLEGTEVRLKH 41 (188)
T ss_dssp CEEEEEEEC-----CSSSHHHHHHHHHHHHHHTSTTEEEEEEE
T ss_pred CCEEEEEEE-----CCCcHHHHHHHHHHHHHhhcCCCeEEEEE
Confidence 468887754 4678888999999999998 898887663
No 133
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=25.23 E-value=63 Score=30.08 Aligned_cols=25 Identities=24% Similarity=0.218 Sum_probs=19.8
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
||=|-+-..|.++|.+.|++|.++.
T Consensus 35 GatG~IG~~l~~~L~~~g~~V~~~~ 59 (381)
T 1n7h_A 35 GITGQDGSYLTEFLLGKGYEVHGLI 59 (381)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCchHHHHHHHHHHHCCCEEEEEe
Confidence 4445555788999999999999875
No 134
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=25.09 E-value=83 Score=26.71 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=29.3
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
+||||.|.. + +|--.-++..+.+.|.+.|++|.++-
T Consensus 4 mmkilii~~-----S-~g~T~~la~~i~~~l~~~g~~v~~~~ 39 (199)
T 2zki_A 4 KPNILVLFY-----G-YGSIVELAKEIGKGAEEAGAEVKIRR 39 (199)
T ss_dssp CCEEEEEEC-----C-SSHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred CcEEEEEEe-----C-ccHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 589988765 3 67777888889999998999998873
No 135
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=24.97 E-value=47 Score=31.13 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=26.7
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCC-eEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGH-RVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~Gh-dV~VIlP~ 320 (405)
++|||.+| |+|-+-..+.+.|++.|+ +|.++-+.
T Consensus 23 ~~~~I~iI-----------G~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFI-----------GFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEE-----------CCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEE-----------CccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 35788776 467788899999999999 99988764
No 136
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=24.78 E-value=57 Score=29.70 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=26.2
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
|||+++..- ....|.++++++|++|.++-|.
T Consensus 3 m~Ililg~g------------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 3 VRIATYASH------------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp SEEEEESST------------THHHHHHHHHHTTCCEEEESCG
T ss_pred eEEEEECCh------------hHHHHHHHHHhCCCEEEEEECC
Confidence 789988862 4567899999999999999876
No 137
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=24.71 E-value=47 Score=28.12 Aligned_cols=36 Identities=28% Similarity=0.301 Sum_probs=27.2
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEE
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VI 317 (405)
+|||+.+ -++.+|-=..++..|.+.|.+.|++|.++
T Consensus 9 ~~ki~I~-----Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~ 44 (167)
T 1ykg_A 9 MPGITII-----SASQTGNARRVAEALRDDLLAAKLNVKLV 44 (167)
T ss_dssp ---CEEE-----EECSSSHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCeEEEE-----EECCchHHHHHHHHHHHHHHHCCCceEEe
Confidence 3566544 34678999999999999999999988775
No 138
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=24.50 E-value=66 Score=30.83 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=30.5
Q ss_pred CCCceEEEEecccccccccccHh--HHHhhHHHHHHHCCCeEEEEe
Q 015531 275 ANVMNVILVAAECGPWSKTGGLG--DVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 275 ~n~MKILfVSSE~aPfaKTGGLG--DVVgSLPKALa~~GhdV~VIl 318 (405)
.+.|||+.|++ --||.| -++..|+.+|+++|.+|-+|=
T Consensus 140 ~~~~kvIav~s------~KGGvGKTT~a~nLA~~La~~g~rVlliD 179 (373)
T 3fkq_A 140 NDKSSVVIFTS------PCGGVGTSTVAAACAIAHANMGKKVFYLN 179 (373)
T ss_dssp TTSCEEEEEEC------SSTTSSHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCceEEEEEC------CCCCChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 34589988887 346665 578899999999999998875
No 139
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=24.43 E-value=43 Score=26.23 Aligned_cols=27 Identities=37% Similarity=0.588 Sum_probs=22.2
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
+|+ |.+-..+.+.|.+.|++|.++-..
T Consensus 12 ~G~-G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 12 IGL-GRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCCEEEESC
T ss_pred ECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 365 777888999999999999988653
No 140
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=24.36 E-value=51 Score=29.38 Aligned_cols=32 Identities=25% Similarity=0.552 Sum_probs=22.7
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
+|||.+| |+|-+-..+.+.|++.|++|.++-+
T Consensus 3 ~m~i~ii-----------G~G~mG~~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 3 AMKIGII-----------GVGKMASAIIKGLKQTPHELIISGS 34 (259)
T ss_dssp CCEEEEE-----------CCSHHHHHHHHHHTTSSCEEEEECS
T ss_pred ccEEEEE-----------CCCHHHHHHHHHHHhCCCeEEEECC
Confidence 4777766 3556667778888888888877654
No 141
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=24.08 E-value=69 Score=28.92 Aligned_cols=26 Identities=35% Similarity=0.495 Sum_probs=21.1
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|||-|=+-..|.++|.+.|++|.++.
T Consensus 7 tGatG~iG~~l~~~L~~~g~~V~~~~ 32 (330)
T 2c20_A 7 CGGAGYIGSHAVKKLVDEGLSVVVVD 32 (330)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEe
Confidence 35556666889999999999999875
No 142
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=23.78 E-value=60 Score=29.08 Aligned_cols=32 Identities=28% Similarity=0.479 Sum_probs=23.8
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
.|+++||. |=+-+-.++.+.|++.|++|.++-
T Consensus 25 ~k~vlITG---------as~gIG~~~a~~l~~~G~~v~~~~ 56 (269)
T 3gk3_A 25 KRVAFVTG---------GMGGLGAAISRRLHDAGMAVAVSH 56 (269)
T ss_dssp CCEEEETT---------TTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEEC---------CCchHHHHHHHHHHHCCCEEEEEc
Confidence 46777764 444444789999999999987764
No 143
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=23.74 E-value=76 Score=28.21 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=18.5
Q ss_pred HHHhhHHHHHHHCCCeEEEEeeC
Q 015531 298 DVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 298 DVVgSLPKALa~~GhdV~VIlP~ 320 (405)
=+-..|.++|.+.|++|.++.-.
T Consensus 13 ~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 13 DLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCC
Confidence 34467889999999999998754
No 144
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=23.59 E-value=51 Score=30.02 Aligned_cols=38 Identities=18% Similarity=0.063 Sum_probs=29.6
Q ss_pred ceEEEEecccccccccccHhHH--HhhHHHHHHHCCCeEEEEeeCCCC
Q 015531 278 MNVILVAAECGPWSKTGGLGDV--AGALPKALARRGHRVMVVAPHYGN 323 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDV--VgSLPKALa~~GhdV~VIlP~Y~~ 323 (405)
+||++.- ||+-|=. +-.|-+.|.+.|++|+|||=.-..
T Consensus 8 k~I~lgi--------TGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 8 KHVGFGL--------TGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp CEEEEEC--------CSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CEEEEEE--------EChHHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 5676643 4777777 788899999999999999976553
No 145
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=23.35 E-value=96 Score=27.99 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=22.8
Q ss_pred eEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 279 KILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|+++||. -+||+| .++.+.|++.|++|.++-
T Consensus 23 k~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~~ 53 (277)
T 2rhc_B 23 EVALVTG------ATSGIG---LEIARRLGKEGLRVFVCA 53 (277)
T ss_dssp CEEEEET------CSSHHH---HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEe
Confidence 5677764 345555 688999999999988763
No 146
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=23.15 E-value=53 Score=27.24 Aligned_cols=28 Identities=18% Similarity=0.190 Sum_probs=22.3
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
|||=|-+-..|.++|.+.|++|.++.-.
T Consensus 9 tGatG~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 9 FGATGQTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EcCCcHHHHHHHHHHHHCCCeEEEEEeC
Confidence 3566666688999999999999988643
No 147
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=22.98 E-value=79 Score=28.98 Aligned_cols=31 Identities=23% Similarity=0.462 Sum_probs=23.5
Q ss_pred eEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 279 KILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|+++||. -+||+| .++.++|++.|++|.++-
T Consensus 29 k~~lVTG------as~GIG---~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 29 KVAFITG------AARGQG---RSHAITLAREGADIIAID 59 (299)
T ss_dssp CEEEEES------TTSHHH---HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEe
Confidence 6777774 345555 788999999999998763
No 148
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=22.75 E-value=77 Score=29.35 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=24.5
Q ss_pred CceEEEEecccccccccccH-hHHHhhHHHHHHHCCCeEEEEe
Q 015531 277 VMNVILVAAECGPWSKTGGL-GDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGL-GDVVgSLPKALa~~GhdV~VIl 318 (405)
+||||+|.+=--+ +|. .-++..+-+.|.+.|++|.++-
T Consensus 2 MmkiLiI~gSpr~----~s~t~~la~~~~~~l~~~g~eV~~~d 40 (273)
T 1d4a_A 2 GRRALIVLAHSER----TSFNYAMKEAAAAALKKKGWEVVESD 40 (273)
T ss_dssp CCEEEEEECCSCT----TSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEEeCCCC----ccHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 5899998873332 333 2233445666777899998875
No 149
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=22.61 E-value=88 Score=29.04 Aligned_cols=40 Identities=28% Similarity=0.327 Sum_probs=32.1
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
..|+.+||++--.-- |---|+.+|.++|+++|.+|..+=|
T Consensus 24 ~~m~~i~Itgt~t~v----GKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 24 SHMTILVVTGTGTGV----GKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp SSCEEEEEEESSTTS----CHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCEEEEEeCCCCC----cHHHHHHHHHHHHHHCCCeEEEEee
Confidence 458999999833222 4556999999999999999999876
No 150
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=22.36 E-value=56 Score=30.67 Aligned_cols=36 Identities=33% Similarity=0.530 Sum_probs=27.1
Q ss_pred CCCCceEEEEecccccccccccHhHHHhhHHHHHHHCC----CeEEEEeeC
Q 015531 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRG----HRVMVVAPH 320 (405)
Q Consensus 274 ~~n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~G----hdV~VIlP~ 320 (405)
.++.|||.|| |+|-+-.+|...|.+.| ++|.++-+.
T Consensus 19 ~~~~mkI~iI-----------G~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 19 YFQSMSVGFI-----------GAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp ---CCCEEEE-----------SCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred ccCCCEEEEE-----------CCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 3456888877 46778889999999999 899888654
No 151
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=22.21 E-value=75 Score=29.65 Aligned_cols=23 Identities=30% Similarity=0.521 Sum_probs=19.1
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
+|++| .+|+++++++|++|.++.
T Consensus 28 SG~mG---~aiA~~~~~~Ga~V~lv~ 50 (232)
T 2gk4_A 28 TGHLG---KIITETLLSAGYEVCLIT 50 (232)
T ss_dssp CCHHH---HHHHHHHHHTTCEEEEEE
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEe
Confidence 45565 678999999999999885
No 152
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=22.21 E-value=52 Score=27.13 Aligned_cols=27 Identities=22% Similarity=0.326 Sum_probs=22.2
Q ss_pred HhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 296 LGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 296 LGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
.|.+-..+.+.|++.|++|.++-+.-.
T Consensus 27 ~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 27 CGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 377778899999999999999976543
No 153
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=22.17 E-value=57 Score=32.06 Aligned_cols=32 Identities=9% Similarity=0.213 Sum_probs=29.4
Q ss_pred ccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 288 GPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 288 aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
+|--|+|- .-|+.+|-.+|++.|.+|+++.|.
T Consensus 174 a~~~~vGD-~rva~Sl~~~~~~~G~~v~~~~P~ 205 (324)
T 1js1_X 174 APHPRPLP-QAVPNSFAEWMNATDYEFVITHPE 205 (324)
T ss_dssp CCCSSCCC-SHHHHHHHHHHHTSSSEEEEECCT
T ss_pred EcccccCC-cchHHHHHHHHHHCCCEEEEeCCc
Confidence 56678898 999999999999999999999995
No 154
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=22.14 E-value=89 Score=28.65 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=27.0
Q ss_pred CceEEEEecccccccccccHhHH-HhhHHHHHHHCCCeEEEEeeCCC
Q 015531 277 VMNVILVAAECGPWSKTGGLGDV-AGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDV-VgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
.+||++..+ ||.|-. +-.|-+.|.+.| +|+|||-.-.
T Consensus 19 ~k~IllgvT--------Gsiaa~k~~~ll~~L~~~g-~V~vv~T~~A 56 (209)
T 1mvl_A 19 KPRVLLAAS--------GSVAAIKFGNLCHCFTEWA-EVRAVVTKSS 56 (209)
T ss_dssp CCEEEEEEC--------SSGGGGGHHHHHHHHHTTS-EEEEEECTGG
T ss_pred CCEEEEEEe--------CcHHHHHHHHHHHHHhcCC-CEEEEEcchH
Confidence 467887655 776544 456778889999 9999986654
No 155
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=22.06 E-value=90 Score=31.11 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=26.3
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
+||||.. ||-|=+-..|.++|.+.|++|.++.=.
T Consensus 147 ~m~VLVT----------GatG~IG~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAIT----------GSRGLVGRALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEE----------STTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5787643 556666688999999999999998643
No 156
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=22.04 E-value=66 Score=29.91 Aligned_cols=32 Identities=28% Similarity=0.417 Sum_probs=23.9
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
|||++|-+ |.+| +.|...|++.|++|.++...
T Consensus 3 mkI~IiGa--------GaiG---~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGA--------GALG---LYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECC--------STTH---HHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECc--------CHHH---HHHHHHHHHCCCeEEEEEcC
Confidence 67877755 5555 66788899999999998753
No 157
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=21.98 E-value=48 Score=29.43 Aligned_cols=31 Identities=23% Similarity=0.168 Sum_probs=21.9
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEE
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVV 317 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VI 317 (405)
||+++||. -+||+| .++.+.|++.|++|.++
T Consensus 1 Mk~vlVTG------as~gIG---~~ia~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 1 MSTAIVTN------VKHFGG---MGSALRLSEAGHTVACH 31 (254)
T ss_dssp -CEEEESS------TTSTTH---HHHHHHHHHTTCEEEEC
T ss_pred CeEEEEeC------CCchHH---HHHHHHHHHCCCEEEEE
Confidence 66666664 234554 68999999999998765
No 158
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=21.85 E-value=86 Score=27.82 Aligned_cols=31 Identities=32% Similarity=0.548 Sum_probs=21.8
Q ss_pred eEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 279 KILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|+++||. -+||+| .++.+.|++.|++|.++-
T Consensus 20 k~vlVTG------as~gIG---~~~a~~l~~~G~~V~~~~ 50 (249)
T 1o5i_A 20 KGVLVLA------ASRGIG---RAVADVLSQEGAEVTICA 50 (249)
T ss_dssp CEEEEES------CSSHHH---HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEC------CCCHHH---HHHHHHHHHCCCEEEEEc
Confidence 4555553 245555 678999999999987763
No 159
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=21.71 E-value=88 Score=28.29 Aligned_cols=26 Identities=19% Similarity=0.419 Sum_probs=20.9
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEee
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIlP 319 (405)
||=|-+-..|.++|.+.|++|.++.-
T Consensus 20 GatG~iG~~l~~~L~~~g~~V~~~~r 45 (342)
T 2x4g_A 20 GATGLLGHHAARAIRAAGHDLVLIHR 45 (342)
T ss_dssp STTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 55555668889999999999998863
No 160
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=21.69 E-value=50 Score=29.67 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=27.4
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
..|||.+| |+|-+-.+|.+.|++.||+|.++-..
T Consensus 18 ~~~kIgiI-----------G~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVL-----------GTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEE-----------CCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEE-----------CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35788776 47888899999999999999988654
No 161
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=21.34 E-value=66 Score=31.54 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=30.6
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
..+||.+| |-++-|+.+|-.+++..|.+|+++.|.
T Consensus 156 ~glkva~v----------GD~~rva~Sl~~~~~~~G~~v~~~~P~ 190 (323)
T 3gd5_A 156 AGLKLAYV----------GDGNNVAHSLLLGCAKVGMSIAVATPE 190 (323)
T ss_dssp TTCEEEEE----------SCCCHHHHHHHHHHHHHTCEEEEECCT
T ss_pred CCCEEEEE----------CCCCcHHHHHHHHHHHcCCEEEEECCC
Confidence 45689886 555899999999999999999999996
No 162
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=21.20 E-value=59 Score=29.58 Aligned_cols=26 Identities=38% Similarity=0.454 Sum_probs=21.1
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|||=|-+-..|.++|.++|++|.++.
T Consensus 15 TGatGfIG~~l~~~Ll~~G~~V~~~~ 40 (338)
T 2rh8_A 15 VGGTGFVASLLVKLLLQKGYAVNTTV 40 (338)
T ss_dssp ECTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEE
Confidence 36666666889999999999998764
No 163
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=21.13 E-value=97 Score=25.21 Aligned_cols=41 Identities=10% Similarity=0.170 Sum_probs=31.3
Q ss_pred CCceEEEEecccccccccccHhH---HHhhHHHHHHHCCCeEEEEeeCCCCC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGD---VAGALPKALARRGHRVMVVAPHYGNY 324 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGD---VVgSLPKALa~~GhdV~VIlP~Y~~i 324 (405)
+++|||.|++ .|+|- ++..|=+++.+.|.++.|-.=.+..+
T Consensus 20 ~~kkIlvvC~--------sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~ 63 (113)
T 1tvm_A 20 SKRKIIVACG--------GAVATSTMAAEEIKELCQSHNIPVELIQCRVNEI 63 (113)
T ss_dssp SSEEEEEESC--------SCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTT
T ss_pred cccEEEEECC--------CCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHH
Confidence 3578999999 88886 56889999999999876655444433
No 164
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.94 E-value=72 Score=28.02 Aligned_cols=32 Identities=25% Similarity=0.538 Sum_probs=23.4
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
.|+++|| ||-+-+-.++.+.|+++|++|.++.
T Consensus 13 ~k~vlIT---------Gas~giG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 13 QRIAYVT---------GGMGGIGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp CEEEEET---------TTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCEEEEE---------CCCChHHHHHHHHHHHCCCEEEEEe
Confidence 4666665 4444445789999999999987765
No 165
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=20.93 E-value=70 Score=30.58 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=23.1
Q ss_pred ceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 278 MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
|+.++||. -+|+|| ..|.++|++.|++|.++.
T Consensus 69 ~~~vlVTG------atG~iG---~~l~~~L~~~g~~V~~~~ 100 (427)
T 4f6c_A 69 LGNTLLTG------ATGFLG---AYLIEALQGYSHRIYCFI 100 (427)
T ss_dssp CEEEEEEC------TTSHHH---HHHHHHHTTTEEEEEEEE
T ss_pred CCEEEEec------CCcHHH---HHHHHHHHcCCCEEEEEE
Confidence 45555553 345555 788999999999998875
No 166
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=20.85 E-value=58 Score=24.58 Aligned_cols=25 Identities=20% Similarity=0.317 Sum_probs=20.4
Q ss_pred ccHhHHHhhHHHHHHHCC-CeEEEEee
Q 015531 294 GGLGDVAGALPKALARRG-HRVMVVAP 319 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~G-hdV~VIlP 319 (405)
|+ |-+-..+.+.|.+.| ++|.++-.
T Consensus 12 G~-G~iG~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 12 GA-GKIGQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp CC-SHHHHHHHHHHHHCSSEEEEEEES
T ss_pred CC-CHHHHHHHHHHHhCCCceEEEEeC
Confidence 56 667788999999999 88887754
No 167
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.84 E-value=1.7e+02 Score=24.90 Aligned_cols=41 Identities=20% Similarity=0.192 Sum_probs=30.6
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeE-EEEeeC
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRV-MVVAPH 320 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV-~VIlP~ 320 (405)
.||+++|-. -.|| ..--+.-+-.+++++.+.||+| .|++=.
T Consensus 12 ~~~~~ivv~-~~Py--g~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVT-GPAY--GTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEEC-SCSS--SSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEc-CCCC--CcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 489887655 3566 2245777888999999999999 888644
No 168
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=20.76 E-value=1.1e+02 Score=30.80 Aligned_cols=43 Identities=12% Similarity=0.058 Sum_probs=29.3
Q ss_pred eEEEEeccccccccccc--HhHHHhhHHHHHHHCCCeEEEEeeCCC
Q 015531 279 NVILVAAECGPWSKTGG--LGDVAGALPKALARRGHRVMVVAPHYG 322 (405)
Q Consensus 279 KILfVSSE~aPfaKTGG--LGDVVgSLPKALa~~GhdV~VIlP~Y~ 322 (405)
.|.+.+..+.||.-.+- =.+++.+|-.|. ++|++|+|++|...
T Consensus 329 ~I~I~tq~~~pyf~p~~~~~~~i~~aL~~Aa-~rGV~VrIl~~~~~ 373 (506)
T 1v0w_A 329 HIEISQQDLNATCPPLPRYDIRLYDALAAKM-AAGVKVRIVVSDPA 373 (506)
T ss_dssp EEEEEESCSSCCTTTSCSCCHHHHHHHHHHH-HTTCEEEEEECCGG
T ss_pred EEEEEeccccccccCcccchHHHHHHHHHHH-hCCCcEEEEeCCCC
Confidence 57777766666554321 136677777664 79999999999764
No 169
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=20.62 E-value=68 Score=28.96 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=22.4
Q ss_pred eEEEEecccccccccccHhH--HHhhHHHHHHHCCCeEEEEe
Q 015531 279 NVILVAAECGPWSKTGGLGD--VAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 279 KILfVSSE~aPfaKTGGLGD--VVgSLPKALa~~GhdV~VIl 318 (405)
|+++|| ||-|. +-.++.++|++.|++|.++-
T Consensus 27 k~vlVT---------Gasg~~GIG~~ia~~l~~~G~~V~~~~ 59 (280)
T 3nrc_A 27 KKILIT---------GLLSNKSIAYGIAKAMHREGAELAFTY 59 (280)
T ss_dssp CEEEEC---------CCCSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEE---------CCCCCCCHHHHHHHHHHHcCCEEEEee
Confidence 566665 44433 55789999999999877664
No 170
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=20.49 E-value=71 Score=31.05 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=30.0
Q ss_pred CCceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 276 NVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 276 n~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
..+||.+|. -+.-|+.+|-.+|++.|.+|+++.|.
T Consensus 153 ~glkva~vG----------D~~~va~Sl~~~~~~~G~~v~~~~P~ 187 (309)
T 4f2g_A 153 RGKTVAWVG----------DANNMLYTWIQAARILDFKLQLSTPP 187 (309)
T ss_dssp TTCEEEEES----------CCCHHHHHHHHHHHHHTCEEEEECCG
T ss_pred CCCEEEEEC----------CCcchHHHHHHHHHHcCCEEEEECCc
Confidence 456898874 34779999999999999999999995
No 171
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=20.34 E-value=99 Score=27.83 Aligned_cols=28 Identities=18% Similarity=0.394 Sum_probs=23.1
Q ss_pred cccHhHHHhhHHHHHHHCCCeEEEEeeC
Q 015531 293 TGGLGDVAGALPKALARRGHRVMVVAPH 320 (405)
Q Consensus 293 TGGLGDVVgSLPKALa~~GhdV~VIlP~ 320 (405)
|||-|=+-..|.++|.+.|++|.++.=.
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 8 TGGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4667777789999999999999988744
No 172
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=20.24 E-value=1.9e+02 Score=23.92 Aligned_cols=45 Identities=13% Similarity=0.031 Sum_probs=32.0
Q ss_pred CceEEEEecccccccccccHhHHHhhHHHHHHHCCCeEEEEeeCCCCC
Q 015531 277 VMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNY 324 (405)
Q Consensus 277 ~MKILfVSSE~aPfaKTGGLGDVVgSLPKALa~~GhdV~VIlP~Y~~i 324 (405)
.+|+++|..- .|+. ..-+-.+--|+.+.+..||+|.|++=..+-.
T Consensus 15 ~~kl~ii~~s-gP~~--~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 15 XXXILIVVTH-GPED--LDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CCEEEEEECC-CGGG--THHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred cceEEEEEcc-CCCC--HHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 3688776664 4552 3345566677888889999999999887754
No 173
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=20.02 E-value=62 Score=29.13 Aligned_cols=25 Identities=24% Similarity=0.231 Sum_probs=20.3
Q ss_pred ccHhHHHhhHHHHHHHCCCeEEEEe
Q 015531 294 GGLGDVAGALPKALARRGHRVMVVA 318 (405)
Q Consensus 294 GGLGDVVgSLPKALa~~GhdV~VIl 318 (405)
||=|-+-..|.++|.+.|++|.++.
T Consensus 19 GatG~iG~~l~~~L~~~G~~V~~~~ 43 (321)
T 2pk3_A 19 GVAGFVGKYLANHLTEQNVEVFGTS 43 (321)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEe
Confidence 5555566889999999999999875
Done!