BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015532
(405 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/351 (42%), Positives = 215/351 (61%), Gaps = 49/351 (13%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREA 134
DD +GH ++ +G+ L RY I+S +GEGTFG+VV+C D+ + VA+KI++++ KY+EA
Sbjct: 17 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 76
Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
A +EI+VL+++ D + Y +PI
Sbjct: 77 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
VR + QL ++V F+H+ +L HTDLKPENIL V+++Y + L + + S
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYN---LEKKRDERSV--- 190
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E
Sbjct: 191 --KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 248
Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
G LFQTH+N EHLAMMER+LGP+P M+ + R +KYF RG RLDW + ++ +R
Sbjct: 249 GFTLFQTHDNREHLAMMERILGPIPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRE 305
Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
K LR L + +H L DL++ +L Y+PA+RL EAL+HPFF R
Sbjct: 306 NCKPLR-RYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 353
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 211/350 (60%), Gaps = 49/350 (14%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
DDK+GH V IG+ L RY I+ +GEGTFG+VVEC D+ + K VA+KI+R++ KYREA
Sbjct: 35 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
A +EI+VL+++ D + ++ +P+
Sbjct: 95 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
VR + QL ++ F+HE +L HTDLKPENIL V++E+ + + +S ++ S
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH---KSCEEKSV--- 208
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW PCD+WS+GCIL E
Sbjct: 209 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 266
Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
G LFQTHEN EHL MME++LGP+P HM+ R R +KYF +G L W + ++ ++
Sbjct: 267 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 323
Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
K L+ ++ ++H L DL++ +L +DPA+R+ EAL HPFF
Sbjct: 324 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 370
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 211/350 (60%), Gaps = 49/350 (14%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
DDK+GH V IG+ L RY I+ +GEGTFG+VVEC D+ + K VA+KI+R++ KYREA
Sbjct: 12 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
A +EI+VL+++ D + ++ +P+
Sbjct: 72 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
VR + QL ++ F+HE +L HTDLKPENIL V++E+ + + +S ++ S
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE---HKSCEEKSV--- 185
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW PCD+WS+GCIL E
Sbjct: 186 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 243
Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
G LFQTHEN EHL MME++LGP+P HM+ R R +KYF +G L W + ++ ++
Sbjct: 244 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 300
Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
K L+ ++ ++H L DL++ +L +DPA+R+ EAL HPFF
Sbjct: 301 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 347
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 211/350 (60%), Gaps = 49/350 (14%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
DDK+GH V IG+ L RY I+ +GEGTFG+VVEC D+ + K VA+KI+R++ KYREA
Sbjct: 3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
A +EI+VL+++ D + ++ +P+
Sbjct: 63 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
VR + QL ++ F+HE +L HTDLKPENIL V++E+ + + +S ++ S
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE---HKSCEEKSV--- 176
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW PCD+WS+GCIL E
Sbjct: 177 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234
Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
G LFQTHEN EHL MME++LGP+P HM+ R R +KYF +G L W + ++ ++
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 291
Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
K L+ ++ ++H L DL++ +L +DPA+R+ EAL HPFF
Sbjct: 292 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 338
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 201/344 (58%), Gaps = 49/344 (14%)
Query: 81 HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
H + G+ L+ RY I+ +GEG FG+VVEC D++ VA+KIV+++++Y EAA EI
Sbjct: 3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT----------------------------------RYRSFPIDLVRE 165
VL+ L D T + F +D +R+
Sbjct: 63 QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 166 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 225
+ Q+ +SV F+H +L HTDLKPENIL V ++Y + + K +D N
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI----KRDERTLIN----P 174
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
IK++DFGS T++ + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E G +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
TH++ EHLAMMER+LGPLP HM+ + +R KYF RLDW + +++ + K L
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKPL 291
Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ ++ Q V+H L DL+Q +L YDPA+R+ REAL+HPFF
Sbjct: 292 K-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 199/344 (57%), Gaps = 49/344 (14%)
Query: 81 HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
H + G+ L+ RY I+ +GEG FG+VVEC D++ VA+KIV+++++Y EAA EI
Sbjct: 3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT----------------------------------RYRSFPIDLVRE 165
VL+ L D T + F +D +R+
Sbjct: 63 QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 166 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 225
+ Q+ +SV F+H +L HTDLKPENIL V ++Y + + K +D N
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI----KRDERTLIN----P 174
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
IK++DFGS T++ + HS +V RHYRAPEVIL LGW+ PCD+WS+GCIL+E G +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
TH++ EHLAMMER+LGPLP HM+ + +R KYF RLDW + +++ + K L
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKPL 291
Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ ++ Q V+H L DL+Q +L YDPA+R+ REAL+HPFF
Sbjct: 292 K-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 187/353 (52%), Gaps = 45/353 (12%)
Query: 73 WRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
++ DD+ H+ + G L + ++ KMG+GTFG+V+ C + K+ A+K+VR+I KY
Sbjct: 16 FQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT 75
Query: 133 EAAMIEIDVLQRLARHD---------------------------------IGGTRYRSFP 159
+A IE D+L+++ D I Y F
Sbjct: 76 RSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFH 135
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I+ ++ ++L+++ ++ ++ L HTDLKPENILL + K R DG +
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSL---ITVRRVTDGKKIQ 192
Query: 220 NL-PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
KS+ IKLIDFG TF+ H +++TR YRAPEVIL LGW+ D+WS GC+L EL
Sbjct: 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252
Query: 279 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR-RAEKYFRRGA-RLDWPDGATSRD 336
+G LF+THE++EHLAMME ++ P+P +M+ A + KY + +L WP+ A+S +
Sbjct: 253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSIN 312
Query: 337 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
S++ V K L L +I + D L +L+ DP R E L+H F
Sbjct: 313 SIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 172/365 (47%), Gaps = 70/365 (19%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
DD G YV +++ RY +L +G+G+FGQVV+ +D++ + VA+K+VR+ ++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
EI +L+ L + D I +++ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
LVR+ +L+ + +H+ R+IH DLKPENILL
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
S IK+IDFGS+ +EHQ + +R YRAPEVILG + P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 335
L + + LA M +LG +P ++ A +RA+ Y R DG+
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ R+ LR P + + G +D L+ L +DPA R+ +ALRHP+ R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
Query: 392 DVRRP 396
+ +P
Sbjct: 415 RLPKP 419
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 174/373 (46%), Gaps = 74/373 (19%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
DD G YV +++ RY +L +G+G FGQVV+ +D++ + VA+K+VR+ ++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
EI +L+ L + D I +++ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
LVR+ +L+ + +H+ R+IH DLKPENILL
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
S IK+IDFGS+ +EHQ + +R YRAPEVILG + P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 335
L + + LA M +LG +P ++ A +RA+ Y R DG+
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ R+ LR P + + G +D L+ L +DPA R+ +ALRHP+ R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
Query: 392 DVRRPTLLVATGE 404
+ +P TGE
Sbjct: 415 RLPKP----PTGE 423
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 169/360 (46%), Gaps = 70/360 (19%)
Query: 76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
DD G YV +++ RY +L +G+G+FGQVV+ +D++ + VA+K+VR+ ++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
EI +L+ L + D I +++ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
LVR+ +L+ + +H+ R+IH DLKPENILL
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
S IK+IDFGS+ +EHQ + +R YRAPEVILG + P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 335
L + + LA M +LG +P ++ A +RA+ Y R DG+
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ R+ LR P + + G +D L+ L +DPA R+ +ALRHP+ R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 170/367 (46%), Gaps = 87/367 (23%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
GE RY I S +G+G+FGQVV+ +D ++E VAIKI+++ + A IE+ +L+ +
Sbjct: 30 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 147 RHD----------------------------------IGGTRYRSFPIDLVRELGRQLLE 172
+HD + T +R ++L R+ +Q+
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 173 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
++ F+ EL +IH DLKPENILL + PK SAIK++
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 184
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
DFGS+ Q + +R YR+PEV+LG+ ++ D+WS+GCILVE+ +GE LF
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
++ + + VLG P H++ +A +A K+F + PDG + + + + P
Sbjct: 245 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 298
Query: 351 IMQH-----------------VDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 390
H H+ D + DL+ +L YDP R++ AL+H FF
Sbjct: 299 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 358
Query: 391 RDVRRPT 397
+ T
Sbjct: 359 KTADEGT 365
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 172/361 (47%), Gaps = 87/361 (24%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
GE RY I S +G+G+FGQVV+ +D ++E VAIKI+++ + A IE+ +L+ +
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHD----------------------------------IGGTRYRSFPIDLVRELGRQLLE 172
+HD + T +R ++L R+ +Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 173 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
++ F+ EL +IH DLKPENILL + PK SAIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 203
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
DFGS+ Q + +R YR+PEV+LG+ ++ D+WS+GCILVE+ +GE LF
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA----TSRDSMRAVW--KL 344
++ + + VLG P H++ +A +A K+F + PDG ++D R
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 317
Query: 345 LRLPNLI-----------MQHVDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 390
+L N++ H+ D + DL+ +L YDP R++ AL+H FF
Sbjct: 318 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
Query: 391 R 391
+
Sbjct: 378 K 378
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 168/361 (46%), Gaps = 87/361 (24%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
GE RY I S +G+G+FGQVV+ +D ++E VAIKI+++ + A IE+ +L+ +
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHD----------------------------------IGGTRYRSFPIDLVRELGRQLLE 172
+HD + T +R ++L R+ +Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 173 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
++ F+ EL +IH DLKPENILL + PK AIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRXAIKIV 203
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
DFGS+ Q + +R YR+PEV+LG+ ++ D+WS+GCILVE+ +GE LF
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
++ + + VLG P H++ +A +A K+F + PDG + + + + P
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 317
Query: 351 IMQH-----------------VDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 390
H H+ D + DL+ +L YDP R++ AL+H FF
Sbjct: 318 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
Query: 391 R 391
+
Sbjct: 378 K 378
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 79/387 (20%)
Query: 75 PDD--KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
P+D K G+++ IG+ RY ++ K+G G F V +D + K+ VA+K+V+S Y
Sbjct: 2 PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 61
Query: 133 EAAMIEIDVLQRLARHD--------------------IGGT------------------- 153
E A+ EI +L+ + D + GT
Sbjct: 62 ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 121
Query: 154 -RYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDY 205
Y+ P+ V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++ ++
Sbjct: 122 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 181
Query: 206 KFLSRSSKDGSYFKNLPKSSA----------------IKLIDFGSTTFEHQDHSYVVSTR 249
+ GS P ++ +K+ D G+ + H+ + + TR
Sbjct: 182 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTR 241
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLGP 303
YR+ EV++G G+N P D+WS C+ EL +G+ LF+ H E H+A++ +LG
Sbjct: 242 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 301
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
+P +++ A + ++++F + G + W L + + A
Sbjct: 302 VPRKLIV-AGKYSKEFFTK-------KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 353
Query: 364 DLLQGLLRYDPAERLKAREALRHPFFT 390
D L +L P +R A E LRHP+
Sbjct: 354 DFLLPMLELIPEKRATAAECLRHPWLN 380
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 79/387 (20%)
Query: 75 PDD--KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
P+D K G+++ IG+ RY ++ K+G G F V +D + K+ VA+K+V+S Y
Sbjct: 18 PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 77
Query: 133 EAAMIEIDVLQRLARHD--------------------IGGT------------------- 153
E A+ EI +L+ + D + GT
Sbjct: 78 ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 137
Query: 154 -RYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDY 205
Y+ P+ V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++ ++
Sbjct: 138 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 197
Query: 206 KFLSRSSKDGSYFKNLPKSSA----------------IKLIDFGSTTFEHQDHSYVVSTR 249
+ GS P ++ +K+ D G+ + H+ + + TR
Sbjct: 198 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTR 257
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLGP 303
YR+ EV++G G+N P D+WS C+ EL +G+ LF+ H E H+A++ +LG
Sbjct: 258 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 317
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
+P +++ A + ++++F + G + W L + + A
Sbjct: 318 VPRKLIV-AGKYSKEFFTK-------KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 369
Query: 364 DLLQGLLRYDPAERLKAREALRHPFFT 390
D L +L P +R A E LRHP+
Sbjct: 370 DFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 170/385 (44%), Gaps = 85/385 (22%)
Query: 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
K G++ IG+ RY ++ K+G G F V C+D + K VA+K+V+S Y E A+
Sbjct: 17 KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 138 EIDVLQRLARHD-----------------IGG-----------------------TRYRS 157
EI +L+ + D I G + Y+
Sbjct: 77 EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 158 FPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDYKFLSR 210
P+ V+ + RQ+L+ + ++H + ++IHTD+KPENIL+ V YV+ +++
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 211 SSKDGSYFKNLPKSSA--------------IKLIDFGSTTFEHQDHSYVVSTRHYRAPEV 256
GS P + +K+ D G+ + H+ + + TR YR+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 257 ILGLGWNYPCDLWSVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVI 310
++G G++ P D+WS C+ EL +G+ LF+ H + +H+A + +LG +P H +
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 311 RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL--LRLPNLIMQHVD---HSAGDLIDL 365
E + RRG +R + KL L +++++ A D
Sbjct: 317 SGKYSREFFNRRG-------------ELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDF 363
Query: 366 LQGLLRYDPAERLKAREALRHPFFT 390
L +L P +R A E LRHP+
Sbjct: 364 LIPMLEMVPEKRASAGECLRHPWLN 388
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 154/352 (43%), Gaps = 89/352 (25%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
RY ++ K+G G F V D VA+KIVR Y EAA EI +LQR+ D
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ----------------------------------------IGGTRYRSFPIDLVRELGRQ 169
I +R P+ V+++ +Q
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 170 LLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
LL + +MH +IHTD+KPEN+L+ E V P+ NL + IK
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE---------------NLIQ---IK 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
+ D G+ + + ++ + TR YR+PEV+LG W D+WS C++ EL +G+ LF+
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 289 E------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
E + +H+A + +LG LP ++ +R + +F SR +R +
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFF------------NSRGLLRNIS 285
Query: 343 KLLRLP--NLIMQHVDHS---AGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
KL P +++ + S A ++ D L +L+ DP +R A + HP+
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 154/352 (43%), Gaps = 89/352 (25%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
RY ++ K+G G F V D VA+KIVR Y EAA EI +LQR+ D
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ----------------------------------------IGGTRYRSFPIDLVRELGRQ 169
I +R P+ V+++ +Q
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 170 LLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
LL + +MH +IHTD+KPEN+L+ E V P+ NL + IK
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE---------------NLIQ---IK 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
+ D G+ + + ++ + TR YR+PEV+LG W D+WS C++ EL +G+ LF+
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 289 E------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
E + +H+A + +LG LP ++ +R + +F SR +R +
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFF------------NSRGLLRNIS 285
Query: 343 KLLRLP--NLIMQHVDHS---AGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
KL P +++ + S A ++ D L +L+ DP +R A + HP+
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 152/332 (45%), Gaps = 82/332 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK---------IVRSINKYREAAMIE----- 138
+Y + K+GEG++G V +C + + ++VAIK +++ I RE M++
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI-ALREIRMLKQLKHP 62
Query: 139 -----IDVLQRLAR-------------HDIGGTRY-RSFPIDLVRELGRQLLESVAFMHE 179
++V +R R H++ RY R P LV+ + Q L++V F H+
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELD--RYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
IH D+KPENIL+ +K+ D+ F + Y+ +
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD------------------- 161
Query: 240 QDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
V+TR YR+PE+++G + P D+W++GC+ EL SG L+ +++ L ++
Sbjct: 162 -----EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR 216
Query: 299 RVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
+ LG L P H + + +YF G ++ P+ + L+ PN+
Sbjct: 217 KTLGDLIPRHQQVFS---TNQYF-SGVKIPDPEDMEPLE--------LKFPNI------- 257
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ + LL+G L DP ERL + L HP+F
Sbjct: 258 -SYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKPEN+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 127 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 165
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 221 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 260
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 261 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKPEN+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 128 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKPEN+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 164
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 220 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 259
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKPEN+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 125 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKPEN+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 164
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 220 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 259
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 142/342 (41%), Gaps = 90/342 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
+H DLKP+N LL++ E AIKL DFG +
Sbjct: 132 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 164
Query: 240 QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L +
Sbjct: 165 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 299 RVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
R LG P +V Y F + AR D+ D
Sbjct: 225 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------ 265
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 266 -----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 301
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 119/278 (42%), Gaps = 63/278 (22%)
Query: 121 AIKIVRSINKYREAAMIEI-DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHE 179
++ + S NKY M + D L ++ + I R S P++L+ QL +V F+H
Sbjct: 102 SVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGR--SIPMNLISIYIYQLFRAVGFIHS 159
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--F 237
L + H D+KP+N+L+ S K + +KL DFGS
Sbjct: 160 LGICHRDIKPQNLLVNS--------------------------KDNTLKLCDFGSAKKLI 193
Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNYPC-DLWSVGCILVELCSGEALFQTHENLEHLAM 296
+ + +R YRAPE++LG P DLWS+GC+ EL G+ LF +++ L
Sbjct: 194 PSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVR 253
Query: 297 MERVLG-PLPHHMVIRADRRAEKYFRRGARLDW----PDGATSRDSMRAVWKLLRLPNLI 351
+ +++G P M+ E F DW P+G S
Sbjct: 254 IIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL---------------- 297
Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
IDLL+ +LRY+P R+ EA+ HPFF
Sbjct: 298 ----------AIDLLEQILRYEPDLRINPYEAMAHPFF 325
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
E + +Y + +G G+FG V E FD E + A+K V +Y+ E+D+++ L
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR---ELDIMKVLDH 59
Query: 148 HDI 150
+I
Sbjct: 60 VNI 62
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 167
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 228 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 265
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 266 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 301
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 161
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 221
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 222 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 259
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 162
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 218 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 257
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 159
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 220 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 257
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 160
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 161 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 221 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 258
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 164
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 224
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 225 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 262
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 263 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 298
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 167
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 168 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 222
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 223 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 262
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 263 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 298
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 159
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 220 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 257
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 160
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 221 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 258
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 159
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 220 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 257
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + S +K++DFG
Sbjct: 145 SADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLARHT 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 238 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 277
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 278 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 165
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 221 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 260
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 261 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 160
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 221 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 258
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 165
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 221 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 260
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 261 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 164
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 220 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 259
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 165
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 221 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 260
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 261 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V +D + +A+K I+ + YRE +++
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 171
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 172 SADIIHRDLKPSNLAV---------------------------NEDCELKILDFGLARHT 204
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF +++ L +
Sbjct: 205 DDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQI 264
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R+ G P ++ R S ++ + L ++P V
Sbjct: 265 MRLTGTPPASVISR--------------------MPSHEARNYINSLPQMPKRNFADVFI 304
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A EAL HP+F++
Sbjct: 305 GANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + S +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLCRHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + S +K++DFG
Sbjct: 149 SADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLARHT 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 242 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 281
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 282 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 162
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 218 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 257
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 164
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 220 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 259
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 260 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 140/349 (40%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 38 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQR-------------------------LARHDIGGTRYRSFPI-----DLVRELGRQL 170
+L R L H +G Y+ D + Q+
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQI 153
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 186
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 247 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 295
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 296 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 139 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 171
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 172 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 232 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 271
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 162 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 194
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 255 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 294
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 295 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 163 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 195
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 256 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 295
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 296 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 139 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 171
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 232 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 271
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 38 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 153
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 186
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 247 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 295
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 296 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 20 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 76 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 135
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 168
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 229 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 277
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 278 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 142/342 (41%), Gaps = 90/342 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ ++F H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
+H DLKP+N LL++ E AIKL DFG +
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 240 QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
+ +++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L +
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 299 RVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
R LG P +V Y F + AR D+ D
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------ 258
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 -----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 26 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 81
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 82 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 141
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 174
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 234
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 235 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 283
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 284 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 20 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L +I G R+ I+ +V++L Q+
Sbjct: 76 ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 135
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + +S +K+
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TSDLKIC 168
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 229 IFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYL-----LSLPHKN------KVPW 277
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 278 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 149 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 242 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 281
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 282 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 139 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 171
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 232 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 271
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + D V+ L Q+L + ++H
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 139 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 171
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 232 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 271
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 140
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 141 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 173
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 174 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 234 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 273
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 274 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIX 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 171 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 23 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 138
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 171
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 172 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 232 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 280
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 281 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 155 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 187
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 248 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 287
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 288 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 140 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 172
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 233 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 272
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 273 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 140 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 172
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 233 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 272
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 273 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 16 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 131
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 164
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 225 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 273
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 274 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 23 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 138
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 171
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 232 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 280
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 281 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 154 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 186
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 247 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 286
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 287 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 24 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 79
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 80 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 139
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 172
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 232
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 233 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 281
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 282 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 15 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 70
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 71 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 130
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 163
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 223
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 224 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 272
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 273 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 148 SADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLARHT 180
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 241 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 280
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 281 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 155 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 187
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 248 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 287
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 288 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 155 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 187
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 248 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 287
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 288 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 145 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 238 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 277
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 278 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 148 SADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLARHT 180
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 241 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 280
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 281 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 149 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 242 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 281
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 282 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 163 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 195
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 196 DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 256 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 295
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 296 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 154 SADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLARHT 186
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 247 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 286
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 287 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 166 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 198
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 199 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 259 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 298
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 299 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 162 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 194
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 255 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 294
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 295 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 143/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+ +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 160
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 221 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 258
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 143/339 (42%), Gaps = 84/339 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+ +R A+ EI +L+ L +I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKP+N+L+ + +K+ D+ L+R+ FG + +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 159
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
++ V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
G P +V Y F + AR D+ D
Sbjct: 220 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 257
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
D LL +L YDP +R+ A+ AL HPFF +DV +P
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 148 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 180
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 241 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 280
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 281 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 16 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 131
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 164
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 225 IFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYL-----LSLPHKN------KVPW 273
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 274 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 141
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 142 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 174
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 175 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 235 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 274
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 275 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 148 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 180
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 241 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 280
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 281 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 145 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 238 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 277
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 278 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 163 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 195
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 256 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 295
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 296 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 145 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 238 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 277
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 278 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 150 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 182
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 243 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 282
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 283 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 150 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 182
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 183 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 243 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 282
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 283 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 150 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 182
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 243 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 282
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 283 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 150 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 182
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 243 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 282
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 283 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 149 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 242 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 281
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 282 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ L+ +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 93 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 153 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 185
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 186 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 246 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 285
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 286 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++DFG
Sbjct: 166 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 198
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 199 DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 259 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 298
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 299 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 77/335 (22%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
+ +++ L K+G GT+ V + + VA+K V+ S A+ EI +++ L
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 149 DIG--------------------------------GTRYRSFPIDLVRELGRQLLESVAF 176
+I G R ++LV+ QLL+ +AF
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
HE +++H DLKP+N+L+ +K+ D+ L ++ I + F S
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDF--------------GLARAFGIPVNTFSSE- 168
Query: 237 FEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
V T YRAP+V++G ++ D+WS GCIL E+ +G+ LF + E L
Sbjct: 169 ---------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK 219
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
++ ++G P+ + + + KY + RD L ++ H
Sbjct: 220 LIFDIMGT-PNESLWPSVTKLPKYNPNIQQ------RPPRD----------LRQVLQPHT 262
Query: 356 DHSA-GDLIDLLQGLLRYDPAERLKAREALRHPFF 389
G+L+D L GLL+ +P RL A++AL HP+F
Sbjct: 263 KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 140/351 (39%), Gaps = 88/351 (25%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEI----- 139
GE Y +G G+FG V + E E VAIK V ++ RE ++ I
Sbjct: 35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKHPN 93
Query: 140 ----------------DVLQRLARHDIGGTRYR----------SFPIDLVRELGRQLLES 173
+V L + T YR + P+ L++ QLL S
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
+A++H + + H D+KP+N+LL P S +KLIDFG
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLD--------------------------PPSGVLKLIDFG 187
Query: 234 STTF--EHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
S + + + +R+YRAPE+I G + D+WS GC++ EL G+ LF
Sbjct: 188 SAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247
Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
++ L + +VLG P I+ + + M + +R
Sbjct: 248 IDQLVEIIKVLG-TPSREQIK--------------------TMNPNYMEHKFPQIRPHPF 286
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF----TRDVRRPT 397
+ D IDL+ LL Y P+ RL A EAL HPFF T + R P
Sbjct: 287 SKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMPN 337
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 146/335 (43%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + +K+ D+ +L+R + D
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF-YLARHTDD------------------------ 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 178 --EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAI+ + Y + + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L R +I G R+ I+ +V++L Q+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 143/349 (40%), Gaps = 91/349 (26%)
Query: 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
VF +G PRY LS +GEG +G V +DN K VAIK + Y + + EI
Sbjct: 20 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
+L +I G R+ I+ +V++L Q+
Sbjct: 76 ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 135
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
L + ++H ++H DLKP N+LL + + +K+
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 168
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
DFG DH + V+TR YRAPE++L G+ D+WSVGCIL E+ S
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
+F L+ L + +LG P + + +A Y L P + W
Sbjct: 229 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 277
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
N + + D A +DLL +L ++P +R++ +AL HP+ +
Sbjct: 278 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++D+G
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDYGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 139/333 (41%), Gaps = 87/333 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
++ + K+GEGT+G V + + E+VA+K +R A+ EI +L+ L +I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
+ P+ L++ QLL+ +AF H R+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
+H DLKP+N+L+ + +K+ D+ L+R+ FG T+ H+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
V T YRAPE++LG ++ D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
LG P +V Y F + AR D+ D
Sbjct: 219 TLGT-PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
D LL +L YDP +R+ A+ AL HPFF
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 138/343 (40%), Gaps = 87/343 (25%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLA 146
++ PRY L +GEG +G V +D+ +K VAIK + Y + + EI +L R
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 147 RHDIGGTR--YRSFPIDLVRELG----------------------------RQLLESVAF 176
++ G R R+ ++ +R++ Q+L + +
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKY 159
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
+H ++H DLKP N+L+ + + +K+ DFG
Sbjct: 160 IHSANVLHRDLKPSNLLINT---------------------------TCDLKICDFGLAR 192
Query: 237 FEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 289
+H + V+TR YRAPE++L G+ D+WSVGCIL E+ S +F
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 290 NLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
L+ L + +LG P + + +A Y + + + W L
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-----------SLPSKTKVAWAKL--- 298
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
S +DLL +L ++P +R+ EAL HP+ +
Sbjct: 299 ------FPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++ FG
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILGFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++D G
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDAGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 153/340 (45%), Gaps = 58/340 (17%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRLARHD 149
+Y ++ K+G+G +G V + D E+VA+K I + +A EI +L L+ H+
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 150 IGGTRYRSFPIDLVREL----------------------------GRQLLESVAFMHELR 181
D R++ QL++ + ++H
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
L+H D+KP NILL + +VKV D+ LSRS F N+ + + + T D
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFG-LSRS------FVNIRRVTNNIPLSINENTENFDD 182
Query: 242 HSYV----VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
+ V+TR YRAPE++LG + D+WS+GCIL E+ G+ +F + L
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL-- 240
Query: 297 MERVLGPL--PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR----AVWKLLRLPNL 350
ER++G + P + + + + F + + R S + WK L L
Sbjct: 241 -ERIIGVIDFPSNEDVES---IQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK-- 294
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
I D + + +DLL LL+++P +R+ A +AL+HPF +
Sbjct: 295 INPKADCNE-EALDLLDKLLQFNPNKRISANDALKHPFVS 333
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 147/335 (43%), Gaps = 78/335 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY---REAAMIE-----------I 139
Y+++ K+G G + +V E + E V +KI++ + K RE ++E
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITLA 98
Query: 140 DVLQ-------RLARHDIGGTRYRSFPIDL----VRELGRQLLESVAFMHELRLIHTDLK 188
D+++ L + T ++ L +R ++L+++ + H + ++H D+K
Sbjct: 99 DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N++ + E+ K ++LID+G F H Q+++ V
Sbjct: 159 PHNVM-IDHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRV 192
Query: 247 STRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
I D R R +R W S + QH+ +
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VS 294
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 394
+ +D L LLRYD RL AREA+ HP+F V+
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++D G
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDGGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
RY+ LS +G G +G V FD + VA+K I+ + YRE +++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
+DV L H +G + + D V+ L Q+L + ++H
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + +K++D G
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDRGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ + V+TR YRAPE++L + +N D+WSVGCI+ EL +G LF ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R++G GA L +S + + L ++P + +V
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L +DLL+ +L D +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 146/347 (42%), Gaps = 97/347 (27%)
Query: 93 RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMI------ 137
+Y ++++GEG +G+V + D VA+K VR ++ RE A++
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 138 ---------EIDVLQRLARH----------DIGGTRYR------SFPIDLVRELGRQLLE 172
++ + R R D T Y P + ++++ QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
+ F+H R++H DLKP+NIL+ S S IKL DF
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADF 164
Query: 233 GST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
G +F+ S VV T YRAPEV+L + P DLWSVGCI E+ + LF+
Sbjct: 165 GLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 348
+++ L + V+G LP DWP D A R + + K +
Sbjct: 224 DVDQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQPI 262
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
+ +D DLL L ++PA+R+ A AL HP+F +D+ R
Sbjct: 263 EKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF-QDLER 305
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 142/341 (41%), Gaps = 96/341 (28%)
Query: 93 RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMI------ 137
+Y ++++GEG +G+V + D VA+K VR ++ RE A++
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 138 ---------EIDVLQRLARH----------DIGGTRYR------SFPIDLVRELGRQLLE 172
++ + R R D T Y P + ++++ QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
+ F+H R++H DLKP+NIL+ S S IKL DF
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADF 164
Query: 233 GST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
G +F+ S VV T YRAPEV+L + P DLWSVGCI E+ + LF+
Sbjct: 165 GLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 348
+++ L + V+G LP DWP D A R + + K +
Sbjct: 224 DVDQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQPI 262
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ +D DLL L ++PA+R+ A AL HP+F
Sbjct: 263 EKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 146/347 (42%), Gaps = 97/347 (27%)
Query: 93 RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMI------ 137
+Y ++++GEG +G+V + D VA+K VR ++ RE A++
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 138 ---------EIDVLQRLARH----------DIGGTRYR------SFPIDLVRELGRQLLE 172
++ + R R D T Y P + ++++ QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
+ F+H R++H DLKP+NIL+ S S IKL DF
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADF 164
Query: 233 GST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
G +F+ S VV T YRAPEV+L + P DLWSVGCI E+ + LF+
Sbjct: 165 GLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 348
+++ L + V+G LP DWP D A R + + K +
Sbjct: 224 DVDQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQPI 262
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
+ +D DLL L ++PA+R+ A AL HP+F +D+ R
Sbjct: 263 EKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF-QDLER 305
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 141/314 (44%), Gaps = 44/314 (14%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLA 146
RY L +GEG F V + D ++VAIK ++ + + A+ EI +LQ L+
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 147 RHDIGGTR----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL-LVSAEYVK 201
+I G ++S I LV + LE + + L L + +K ++ L EY+
Sbjct: 71 HPNIIGLLDAFGHKS-NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHSYV--VSTRHYRAPEVIL 258
+ L R K + L ++ +KL DFG + +F + +Y V TR YRAPE++
Sbjct: 130 --QHWILHRDLKPNNLL--LDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 259 GL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAE 317
G + D+W+VGCIL EL +L+ L + LG
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLG--------------- 230
Query: 318 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLIDLLQGLLRYDPAE 376
WPD + D + P + + H+ +AG DL+DL+QGL ++P
Sbjct: 231 ----TPTEEQWPDMCSLPDYV----TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA 282
Query: 377 RLKAREALRHPFFT 390
R+ A +AL+ +F+
Sbjct: 283 RITATQALKMKYFS 296
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 85/336 (25%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMI------- 137
R + L +G G +G V +D ++ VA+K ++ + YRE ++
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 138 ------------------EIDVLQRLARHDIGG-TRYRSFPIDLVRELGRQLLESVAFMH 178
E+ ++ L D+ + ++ + V+ L QLL + ++H
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + S ++++DFG
Sbjct: 149 SAGIIHRDLKPSNV---------------------------AVNEDSELRILDFGLARQA 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA-M 296
++ + V+TR YRAPE++L + +N D+WSVGCI+ EL G+ALF + ++ L +
Sbjct: 182 DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
ME V P P + + A Y + L +P + +
Sbjct: 242 MEVVGTPSPEVLAKISSEHARTYIQ---------------------SLPPMPQKDLSSIF 280
Query: 357 HSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L IDLL +L D +R+ A EAL H +F++
Sbjct: 281 RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 85/336 (25%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMI------- 137
R + L +G G +G V +D ++ VA+K ++ + YRE ++
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 138 ------------------EIDVLQRLARHDIGG-TRYRSFPIDLVRELGRQLLESVAFMH 178
E+ ++ L D+ + ++ + V+ L QLL + ++H
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + S ++++DFG
Sbjct: 149 SAGIIHRDLKPSNV---------------------------AVNEDSELRILDFGLARQA 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA-M 296
++ + V+TR YRAPE++L + +N D+WSVGCI+ EL G+ALF + ++ L +
Sbjct: 182 DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
ME V P P + + A Y + L +P + +
Sbjct: 242 MEVVGTPSPEVLAKISSEHARTYIQ---------------------SLPPMPQKDLSSIF 280
Query: 357 HSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L IDLL +L D +R+ A EAL H +F++
Sbjct: 281 RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 130/346 (37%), Gaps = 89/346 (25%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMI----- 137
T RY ++++G G +G V + D VA+K VR I+ RE A++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 138 --------------------EIDVLQRLARHDIGGTRY------RSFPIDLVRELGRQLL 171
EI V D Y P + +++L RQ L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
+ F+H ++H DLKPENIL+ S VK+ D+ S + F
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP------------ 170
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
VV T YRAPEV+L + P D+WSVGCI E+ + LF +
Sbjct: 171 -------------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 217
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNL 350
+ L + ++G P DWP D + R + R P
Sbjct: 218 DQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGPRP 253
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
+ V LL +L ++P +R+ A AL+H + +D P
Sbjct: 254 VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 135/332 (40%), Gaps = 83/332 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDI 150
YR L +G G +G V D VAIK + R + + A E+ +L+ + ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 151 GG-------------------------------TRYRSFPIDLVRELGRQLLESVAFMHE 179
G ++ D ++ L Q+L+ + ++H
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA 146
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
+IH DLKP N+ + + +K++DFG
Sbjct: 147 AGIIHRDLKPGNL---------------------------AVNEDCELKILDFGLARQAD 179
Query: 240 QDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
+ V TR YRAPEVIL + + D+WSVGCI+ E+ +G+ LF+ ++L+ L +
Sbjct: 180 SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 239
Query: 299 RVLGPLPHHMVIRADRRAEKYFRRG-ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
+V G P V R K + +G L+ D A+ I+ +
Sbjct: 240 KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS-----------------ILTNASP 282
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
A ++LL+ +L D +R+ A EAL HP+F
Sbjct: 283 LA---VNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 135/354 (38%), Gaps = 92/354 (25%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-----------SINKYREA 134
+G T RY ++++G G +G V + D VA+K VR I+ RE
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 135 AMI-------------------------EIDVLQRLARHDIGGTRY------RSFPIDLV 163
A++ EI V D Y P + +
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
++L RQ L + F+H ++H DLKPENIL+ S VK+ D+ ++ SY L
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL-- 176
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
+ VV T YRAPEV+L + P D+WSVGCI E+ +
Sbjct: 177 -------------------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVW 342
LF + + L + ++G P DWP D + R +
Sbjct: 218 LFCGNSEADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-- 256
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
R P + V LL +L ++P +R+ A AL+H + +D P
Sbjct: 257 ---RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 154/370 (41%), Gaps = 87/370 (23%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRLARHD 149
RY I +G G++G V E +D +K +VAIK I+R + I EI +L RL HD
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHD 112
Query: 150 -------------------------IGGTRYRSF---PIDL----VRELGRQLLESVAFM 177
I + ++ P+ L ++ L LL V ++
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
H ++H DLKP N L+ VKV D+ + + S P+ + L+ F
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLE 292
T + + V TR YRAPE+IL L NY D+WS+GCI EL L EN+
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELIL-LQENYTEAIDVWSIGCIFAEL-----LNMIKENVA 286
Query: 293 HLAMMERVLGPL---PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 349
+ A GPL + D++A F+ R +RD + ++ +L P+
Sbjct: 287 YHADR----GPLFPGSSCFPLSPDQKAGNDFKFHTR-------GNRDQLNVIFNILGTPS 335
Query: 350 L-------------------------IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
+ + S+ D I LL+ +L ++P +R+ E L
Sbjct: 336 EEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECL 395
Query: 385 RHPFFTRDVR 394
HPFF ++VR
Sbjct: 396 AHPFF-KEVR 404
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 143/365 (39%), Gaps = 88/365 (24%)
Query: 63 GAIPRTGSPPWRPDDKDGHY---VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL 119
G +PR R K G Y V L Y + +G G +G V D E
Sbjct: 13 GLVPRGSMSLIR---KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEK 69
Query: 120 VAIKI--------VRSINKYREAAMIE----------IDV---------------LQRLA 146
VAIK + + YRE +++ +DV +
Sbjct: 70 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM 129
Query: 147 RHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 206
+ D+ F + ++ L Q+L+ + ++H ++H DLKP N+
Sbjct: 130 QTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL-------------- 175
Query: 207 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYP 265
+ + +K++DFG + + V TR YRAPEVIL + +N
Sbjct: 176 -------------AVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 266 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR 325
D+WSVGCI+ E+ +G+ LF+ + L+ L + +V G V + + +A K +
Sbjct: 223 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY----- 277
Query: 326 LDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
+ L + P Q ++ DLL+ +L D +RL A +AL
Sbjct: 278 ---------------IQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 322
Query: 385 RHPFF 389
HPFF
Sbjct: 323 THPFF 327
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 85/336 (25%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMI------- 137
R + L +G G +G V +D ++ VA+K ++ + YRE ++
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 80
Query: 138 ------------------EIDVLQRLARHDIGG-TRYRSFPIDLVRELGRQLLESVAFMH 178
E+ ++ L D+ + ++ + V+ L QLL + ++H
Sbjct: 81 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+IH DLKP N+ + + ++++DFG
Sbjct: 141 SAGIIHRDLKPSNV---------------------------AVNEDCELRILDFGLARQA 173
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA-M 296
++ + V+TR YRAPE++L + +N D+WSVGCI+ EL G+ALF + ++ L +
Sbjct: 174 DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
ME V P P + + A Y + L +P + +
Sbjct: 234 MEVVGTPSPEVLAKISSEHARTYIQ---------------------SLPPMPQKDLSSIF 272
Query: 357 HSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
A L IDLL +L D +R+ A EAL H +F++
Sbjct: 273 RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 133/346 (38%), Gaps = 89/346 (25%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMI----- 137
T RY ++++G G +G V + D VA+K VR I+ RE A++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 138 --------------------EIDVLQRLARHDIGGTRY------RSFPIDLVRELGRQLL 171
EI V D Y P + +++L RQ L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
+ F+H ++H DLKPENIL+ S VK+ D+ ++ SY L
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL---------- 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
+ VV T YRAPEV+L + P D+WSVGCI E+ + LF +
Sbjct: 169 -----------APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 217
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNL 350
+ L + ++G P DWP D + R + R P
Sbjct: 218 DQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGPRP 253
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
+ V LL +L ++P +R+ A AL+H + +D P
Sbjct: 254 VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 83/355 (23%)
Query: 79 DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
+ Y IG++ + RY+ L +G G G V +D + VAIK + +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEI-----------------------DVLQRLARHDIGGTRYRSFPIDLVR 164
YRE ++++ DV + D ++ +D R
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 165 E--LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTSFMMTP 184
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ G
Sbjct: 185 ---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 283 ALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSR 335
LF ++++ ++E++ P P M V KY +PD
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
DS +H A DLL +L D ++R+ EAL+HP+
Sbjct: 283 DS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 135/327 (41%), Gaps = 82/327 (25%)
Query: 98 SKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGG-- 152
+ +G G +G V D E VAIK + R + + A E+ +L+ + ++ G
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 153 ------TRYRSF----------PIDLVRELG------------RQLLESVAFMHELRLIH 184
+ R+F DL + +G Q+L+ + ++H ++H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVH 149
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DLKP N+ + + +K++DFG + +
Sbjct: 150 RDLKPGNL---------------------------AVNEDCELKILDFGLARHADAEMTG 182
Query: 245 VVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
V TR YRAPEVIL + +N D+WSVGCI+ E+ +G+ LF+ + L+ L + +V G
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 242
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDL 362
V + + +A K + + L + P Q ++
Sbjct: 243 PGTEFVQKLNDKAAKSY--------------------IQSLPQTPRKDFTQLFPRASPQA 282
Query: 363 IDLLQGLLRYDPAERLKAREALRHPFF 389
DLL+ +L D +RL A +AL HPFF
Sbjct: 283 ADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 79/332 (23%)
Query: 93 RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--- 147
+Y L K+GEGT+G V + +N E L I++ + + EI +L+ L
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 148 ---HDIGGTRYRSFPI------DLVRELG---------------RQLLESVAFMHELRLI 183
+D+ T+ R + DL + L QLL +A+ H+ R++
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H DLKP+N+L+ +K+ D+ L+R+ FG + ++
Sbjct: 123 HRDLKPQNLLINREGELKIADFG-LARA--------------------FGIPV---RKYT 158
Query: 244 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
+ V T YRAP+V++G ++ D+WSVGCI E+ +G LF + L + R+LG
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILG 218
Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRLPNLIMQHVDHSAG 360
P+ +WP+ D V++ L + ++ +D S
Sbjct: 219 T-PNSK------------------NWPNVTELPKYDPNFTVYEPLPWESF-LKGLDESG- 257
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
IDLL +L+ DP +R+ A++AL H +F +
Sbjct: 258 --IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 79/332 (23%)
Query: 93 RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--- 147
+Y L K+GEGT+G V + +N E L I++ + + EI +L+ L
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 148 ---HDIGGTRYRSFPI------DLVRELG---------------RQLLESVAFMHELRLI 183
+D+ T+ R + DL + L QLL +A+ H+ R++
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H DLKP+N+L+ +K+ D+ L+R+ FG + ++
Sbjct: 123 HRDLKPQNLLINREGELKIADFG-LARA--------------------FGIPV---RKYT 158
Query: 244 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
+ V T YRAP+V++G ++ D+WSVGCI E+ +G LF + L + R+LG
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRLPNLIMQHVDHSAG 360
P+ +WP+ D V++ L + ++ +D S
Sbjct: 219 T-PNSK------------------NWPNVTELPKYDPNFTVYEPLPWESF-LKGLDESG- 257
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
IDLL +L+ DP +R+ A++AL H +F +
Sbjct: 258 --IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 71/337 (21%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
N++ +++ S +GEG +G V E+VAIK + +K + + EI +L+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDI----GGTRYRSFP-------------IDLVRELGRQLLE-------------SVAF 176
+I R SF DL R + Q+L +V
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
+H +IH DLKP N+L+ S +KV D+ + + S+ D S P +++F
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE----PTGQQSGMVEF- 182
Query: 234 STTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
V+TR YRAPEV+L ++ D+WS GCIL EL +F +
Sbjct: 183 ------------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
L ++ ++G PH L + +R+ ++++ P M
Sbjct: 231 QLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPLEKM 274
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ G IDLLQ +L +DPA+R+ A+EAL HP+
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 147/360 (40%), Gaps = 83/360 (23%)
Query: 74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----- 125
R + Y IG++ + RY+ L +G G G V +D + VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 126 ---RSINKYREAAMIEI-----------------------DVLQRLARHDIGGTRYRSFP 159
+ YRE ++++ DV + D ++
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 160 IDLVRE--LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
+D R L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTS 179
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
F P YVV TR+YRAPEVILG+G+ D+WSVGCI+ E
Sbjct: 180 FMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 278 LCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPD 330
+ G LF ++++ ++E++ P P M V KY +PD
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 331 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
DS +H A DLL +L D ++R+ EAL+HP+
Sbjct: 278 VLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 112
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 113 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 172
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
H D+KP+N+LL P ++ +KL DFGS
Sbjct: 173 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 206
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +
Sbjct: 207 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 265
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
VLG P IR F+ P W + P +
Sbjct: 266 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 304
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 305 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 347
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 122
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 123 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 182
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
H D+KP+N+LL P ++ +KL DFGS
Sbjct: 183 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 216
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +
Sbjct: 217 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 275
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
VLG P IR F+ P W + P +
Sbjct: 276 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 314
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 315 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 357
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 132/346 (38%), Gaps = 89/346 (25%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMI----- 137
T RY ++++G G +G V + D VA+K VR I+ RE A++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 138 --------------------EIDVLQRLARHDIGGTRY------RSFPIDLVRELGRQLL 171
EI V D Y P + +++L RQ L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
+ F+H ++H DLKPENIL+ S VK+ D+ ++ SY L
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL---------- 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
VV T YRAPEV+L + P D+WSVGCI E+ + LF +
Sbjct: 169 -----------DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 217
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNL 350
+ L + ++G P DWP D + R + R P
Sbjct: 218 DQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGPRP 253
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
+ V LL +L ++P +R+ A AL+H + +D P
Sbjct: 254 VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 79/332 (23%)
Query: 93 RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--- 147
+Y L K+GEGT+G V + +N E L I++ + + EI +L+ L
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 148 ---HDIGGTRYRSFPI------DLVRELG---------------RQLLESVAFMHELRLI 183
+D+ T+ R + DL + L QLL +A+ H+ R++
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H DLKP+N+L+ +K+ D+ L+R+ FG + ++
Sbjct: 123 HRDLKPQNLLINREGELKIADFG-LARA--------------------FGIPV---RKYT 158
Query: 244 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
+ + T YRAP+V++G ++ D+WSVGCI E+ +G LF + L + R+LG
Sbjct: 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRLPNLIMQHVDHSAG 360
P+ +WP+ D V++ L + ++ +D S
Sbjct: 219 T-PNSK------------------NWPNVTELPKYDPNFTVYEPLPWESF-LKGLDESG- 257
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
IDLL +L+ DP +R+ A++AL H +F +
Sbjct: 258 --IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 120
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 121 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 180
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
H D+KP+N+LL P ++ +KL DFGS
Sbjct: 181 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 214
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +
Sbjct: 215 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 273
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
VLG P IR F+ P W + P +
Sbjct: 274 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 312
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 313 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 355
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 177
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 178 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 277
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 278 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 118
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 178
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
H D+KP+N+LL P ++ +KL DFGS
Sbjct: 179 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 212
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +
Sbjct: 213 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
VLG P IR F+ P W + P +
Sbjct: 272 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 310
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 311 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 353
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 118
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 178
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 179 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 212
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 273 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 311
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 312 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 353
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 163
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 164 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 223
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
H D+KP+N+LL P ++ +KL DFGS
Sbjct: 224 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 257
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +
Sbjct: 258 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 316
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
VLG P IR F+ P W + P +
Sbjct: 317 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 355
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 356 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 398
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 88/339 (25%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQR 144
+ L +Y+ L K+GEGT+G V + D++ + +VA+K +R A+ EI +L+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 145 LARHDIGGT------------RYRSFPIDLVRELGR---------------QLLESVAFM 177
L +I + DL + L QLL VA
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---S 234
H+ R++H DLKP+N+L+ S DG A+KL DFG +
Sbjct: 136 HQHRILHRDLKPQNLLINS-----------------DG----------ALKLADFGLARA 168
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
+ +++ V T YRAP+V++G ++ D+WS+GCI E+ +G+ LF + +
Sbjct: 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 294 LAMMERVLG-PLPHH--MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
L + +LG P P V ++ F+ + W +P
Sbjct: 229 LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS---------------IIPGF 273
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ IDLL +L +DP +R+ AR+A+ HP+F
Sbjct: 274 CQEG--------IDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 88/339 (25%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQR 144
+ L +Y+ L K+GEGT+G V + D++ + +VA+K +R A+ EI +L+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 145 LARHDIGGT------------RYRSFPIDLVRELGR---------------QLLESVAFM 177
L +I + DL + L QLL VA
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---S 234
H+ R++H DLKP+N+L+ S DG A+KL DFG +
Sbjct: 136 HQHRILHRDLKPQNLLINS-----------------DG----------ALKLADFGLARA 168
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
+ +++ V T YRAP+V++G ++ D+WS+GCI E+ +G+ LF + +
Sbjct: 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 294 LAMMERVLG-PLPHH--MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
L + +LG P P V ++ F+ + W +P
Sbjct: 229 LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS---------------IIPGF 273
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ IDLL +L +DP +R+ AR+A+ HP+F
Sbjct: 274 CQEG--------IDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 96
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 97 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 156
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 157 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 190
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 251 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 289
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 290 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 331
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 103
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 104 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 163
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 164 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 197
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 257
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 258 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 296
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 297 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 338
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 89
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 90 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 149
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
H D+KP+N+LL P ++ +KL DFGS
Sbjct: 150 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 183
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +
Sbjct: 184 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
VLG P IR F+ P W + P +
Sbjct: 243 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 281
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 282 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 324
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 96
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 97 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 156
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 157 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 190
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 251 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 289
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 290 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 331
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F +P
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMVP------ 186
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
V TR+YRAPEVILG+G+ D+WSVGCI+ E+ G LF
Sbjct: 187 ----------------FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 230
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
++++ ++E++ P P M V KY +PD DS
Sbjct: 231 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 286
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 287 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 324
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 92
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 93 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 152
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 153 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 186
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 246
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 247 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 285
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 286 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 327
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ G LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
++++ ++E++ P P M V KY +PD DS
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 97
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 98 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 157
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 158 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 191
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 251
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 252 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 290
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 291 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 332
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 142/337 (42%), Gaps = 71/337 (21%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
N++ +++ S +GEG +G V E+VAIK + +K + + EI +L+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDI----GGTRYRSFP-------------IDLVRELGRQLLE-------------SVAF 176
+I R SF DL R + Q+L +V
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
+H +IH DLKP N+L+ S +KV D+ + + S+ D S
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS----------------- 170
Query: 234 STTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
T + + V+TR YRAPEV+L ++ D+WS GCIL EL +F +
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
L ++ ++G PH L + +R+ ++++ P M
Sbjct: 231 QLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPLEKM 274
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ G IDLLQ +L +DPA+R+ A+EAL HP+
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 85
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 86 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 145
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 146 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 179
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 239
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 240 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 278
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 279 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 320
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ G LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
++++ ++E++ P P M V KY +PD DS
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 142/337 (42%), Gaps = 71/337 (21%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
N++ +++ S +GEG +G V E+VAIK + +K + + EI +L+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDI----GGTRYRSFP-------------IDLVRELGRQLLE-------------SVAF 176
+I R SF DL R + Q+L +V
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
+H +IH DLKP N+L+ S +KV D+ + + S+ D S
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS----------------- 170
Query: 234 STTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
T + + V+TR YRAPEV+L ++ D+WS GCIL EL +F +
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
L ++ ++G PH L + +R+ ++++ P M
Sbjct: 231 QLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPLEKM 274
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ G IDLLQ +L +DPA+R+ A+EAL HP+
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ G LF
Sbjct: 186 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
++++ ++E++ P P M V KY +PD DS
Sbjct: 230 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 285
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 286 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 88
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 89 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 148
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 149 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 182
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 242
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 243 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 281
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 282 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 323
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 85 SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V ++ E+ ++++L +I RY
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG + R ++ + A + K+ R +
Sbjct: 239 LGTPTREQI------------REMNPNYTEFAFPQIKAHPWTKVFR---------PRTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 83/355 (23%)
Query: 79 DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
+ Y IG++ + RY+ L +G G G VV +D + VAIK + +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEI-----------------------DVLQRLARHDIGGTRYRSFPIDLVR 164
YRE ++++ DV + D ++ +D R
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 165 E--LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTSFMMTP 184
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
YVV TR+YRAPEVILG+G+ D+WSVG I+ E+ G
Sbjct: 185 ---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG 222
Query: 283 ALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSR 335
LF ++++ ++E++ P P M V KY +PD
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
DS +H A DLL +L D ++R+ EAL+HP+
Sbjct: 283 DS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V +++ E+ ++++L +I RY
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V ++ E+ ++++L +I RY
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
H D+KP+N+LL P ++ +KL DFGS
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
+ SY+ S R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +
Sbjct: 179 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
VLG + R ++ + A + K+ R +
Sbjct: 238 VLGTPTREQI------------REMNPNYTEFAFPQIKAHPWTKVFR---------PRTP 276
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 277 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 97/229 (42%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ +S + F P
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN---FMMTP------ 182
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ EL G +FQ
Sbjct: 183 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-----GARLD--WPDGATSRDSMRAV 341
++++ + LG + Y G + +PD +S R
Sbjct: 227 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDK 286
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
K DLL +L DP +R+ EALRHP+ T
Sbjct: 287 IK---------------TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ G LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
++++ ++E++ P P M V KY +PD DS
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ G LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
++++ ++E++ P P M V KY +PD DS
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 222
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 223 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 322
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 323 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTPE----- 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
V TR+YRAPEVILG+G+ D+WSVGCI+ E+ G LF
Sbjct: 186 -----------------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
++++ ++E++ P P M V KY +PD DS
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 285 -----------EHNALKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 132/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
+G G+FG V + + ELVAIK V ++ E+ ++++L +I RY
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
++ P+ V+ QL S+A++H +
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
H D+KP+N+LL P ++ +KL DFGS +
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
+ + +R+YRAPE+I G + D+WS GC+L EL G+ +F ++ L + +V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
LG P IR F+ P W + P +
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
+ I L LL Y P RL EA H FF ++R P + + G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 183
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 184 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 228 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 283
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 284 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 222
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 223 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 322
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 323 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 186 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 285
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 286 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 186 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 285
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 286 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 179 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 278
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 279 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 177
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 178 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 277
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 278 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVSA 197
D L R R+ R + P L++ QL+ S+ +H + + H D+KP N+L+ A
Sbjct: 110 DTLHRCCRNYY--RRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA 167
Query: 198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQDHSYVVSTRHYRAP 254
DG+ +KL DFGS + + +Y+ S R+YRAP
Sbjct: 168 ----------------DGT----------LKLCDFGSAKKLSPSEPNVAYICS-RYYRAP 200
Query: 255 EVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR-- 311
E+I G + D+WSVGCI E+ GE +F+ + L + RVLG P V+R
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG-CPSREVLRKL 259
Query: 312 --ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL 369
+ + Y +G + W N+ H A + DLL L
Sbjct: 260 NPSHTDVDLYNSKG--IPW-------------------SNVFSDHSLKDAKEAYDLLSAL 298
Query: 370 LRYDPAERLKAREALRHPFF 389
L+Y P ER+K EAL HP+F
Sbjct: 299 LQYLPEERMKPYEALCHPYF 318
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 179 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 278
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L DPA+R+ +AL+HP+
Sbjct: 279 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA---------------- 176
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
+F T + V TR+YRAPEVILG+G+ D+WSVGCI+ EL G +FQ
Sbjct: 177 CTNFMMTPY--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT 228
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-----GARLD--WPDGATSRDSMRAV 341
++++ + LG + Y G + + +PD +S R
Sbjct: 229 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDK 288
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
K DLL +L DP +R+ EALRHP+ T
Sbjct: 289 IK---------------TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 322
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 88/338 (26%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
+Y L +GEG++G V++C + + +VAIK + ++ AM EI +L++L RH+
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHE 84
Query: 150 -------IGGTRYRSFPI---------------------DLVRELGRQLLESVAFMHELR 181
+ + R + + +V++ Q++ + F H
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
+IH D+KPENIL+ + VK+ D+ F + G + +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD--------------------- 183
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
V+TR YRAPE+++G + + D+W++GC++ E+ GE LF +++ L +
Sbjct: 184 ---EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240
Query: 301 LGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-----IMQH 354
LG L P H ++ F + V+ +RLP + + +
Sbjct: 241 LGNLIPRH---------QELFNKN----------------PVFAGVRLPEIKEREPLERR 275
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
+ +IDL + L DP +R E L H FF D
Sbjct: 276 YPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 103/335 (30%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
RY I+ +G+G+FG+V++C D ++ A+K++ NK + E+++L++L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAFMH 178
+I GG + + F + +Q+ + +MH
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H DLKPENILL S E K IK+IDFG +T
Sbjct: 139 KHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCF 174
Query: 239 HQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
Q+ + T +Y APEV+ G ++ CD+WS G IL L SG F + L
Sbjct: 175 QQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
+E KY D P T D
Sbjct: 234 VE-----------------TGKY-----AFDLPQWRTISD-------------------- 251
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
D DL++ +L + P+ R+ A + L HP+ +
Sbjct: 252 ----DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 103/335 (30%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
RY I+ +G+G+FG+V++C D ++ A+K++ NK + E+++L++L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAFMH 178
+I GG + + F + +Q+ + +MH
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H DLKPENILL S E K IK+IDFG +T
Sbjct: 139 KHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCF 174
Query: 239 HQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
Q+ + T +Y APEV+ G ++ CD+WS G IL L SG F + L
Sbjct: 175 QQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
+E KY D P T D
Sbjct: 234 VE-----------------TGKY-----AFDLPQWRTISD-------------------- 251
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
D DL++ +L + P+ R+ A + L HP+ +
Sbjct: 252 ----DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 138/330 (41%), Gaps = 69/330 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHD 149
RYR ++K+GEGT+G+V + D E VAIK +R ++ A+ E+ +L+ L +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 150 I---GGTRYRSFPIDLVRELGR-----------------------QLLESVAFMHELRLI 183
I + + + L+ E QL+ V F H R +
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCL 154
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H DLKP+N+LL ++ + P K G + L ++ I + F +
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKI-------GDF--GLARAFGIPIRQF----------T 195
Query: 244 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
+ + T YR PE++LG ++ D+WS+ CI E+ LF ++ L + VLG
Sbjct: 196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLG 255
Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 362
LP WP G T+ + + R L +
Sbjct: 256 -LPDDTT------------------WP-GVTALPDWKQSFPKFRGKTLKRVLGALLDDEG 295
Query: 363 IDLLQGLLRYDPAERLKAREALRHPFFTRD 392
+DLL +L DP +R+ A+ AL HP+F+ +
Sbjct: 296 LDLLTAMLEMDPVKRISAKNALEHPYFSHN 325
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 78/335 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVA------------------IKIVRSINKYREAA 135
Y+++ K+G G + +V E + E VA ++ +R A
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 136 MIEIDVLQR---LARHDIGGTRYRSFPIDL----VRELGRQLLESVAFMHELRLIHTDLK 188
I D + R L + T ++ L +R ++L+++ + H + ++H D+K
Sbjct: 99 DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+L + E+ K ++LID+G F H Q+++ V
Sbjct: 159 PHNVL-IDHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRV 192
Query: 247 STRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 304
++R+++ PE+++ ++Y D+WS+GC+L + E F H+N + L + +VLG
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 305 PHH-----MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D R R +R W S + QH+ +
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VS 294
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 394
+ +D L LLRYD RL AREA+ HP+F V+
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 329
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 145/355 (40%), Gaps = 83/355 (23%)
Query: 79 DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
+ Y IG++ + RY+ L +G G G V +D + VAIK + +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEI-----------------------DVLQRLARHDIGGTRYRSFPIDLVR 164
YRE ++++ DV + D ++ +D R
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 165 E--LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
L Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTSFMMTP 184
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
YVV TR+YRAPEVILG+G+ D+WSVG I+ E+ G
Sbjct: 185 ---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG 222
Query: 283 ALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSR 335
LF ++++ ++E++ P P M V KY +PD
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
DS +H A DLL +L D ++R+ EAL+HP+
Sbjct: 283 DS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 140/349 (40%), Gaps = 85/349 (24%)
Query: 84 FAIGENLTPRYRILSKMGEGTFG-----------------QVVECFD---NEKKELVAIK 123
F + ++ Y I+ +G G +G ++ FD N K+ L +K
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 124 IVRSINKYREAAMIEI-------------DVLQRLARHDIGGTRYRSFPIDL--VRELGR 168
I++ A+ +I V+ L D+ + S P+ L VR
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY 166
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSS 225
QLL + +MH ++IH DLKP N+L+ +K+ D+ + L S + YF
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM------ 220
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL 284
+ V+TR YRAPE++L L + DLWSVGCI E+ + L
Sbjct: 221 -----------------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 263
Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
F + L ++ VLG P VI+ A + +RA +
Sbjct: 264 FPGKNYVHQLQLIMMVLG-TPSPAVIQ--------------------AVGAERVRAYIQS 302
Query: 345 LRLPNLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
L + + D + LL +LR++P+ R+ A ALRHPF +
Sbjct: 303 LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 112/337 (33%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
+I GG +R R +D R + RQ+L + +M
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYM 165
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
H+ +++H DLKPEN+LL S SKD + I++IDFG ST
Sbjct: 166 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 201
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 250
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
+GA D ++ V K LP
Sbjct: 251 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 274
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ V SA DLI + +L Y P+ R+ AR+AL H +
Sbjct: 275 KKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 112/337 (33%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
+I GG +R R +D R + RQ+L + +M
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYM 166
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
H+ +++H DLKPEN+LL S SKD + I++IDFG ST
Sbjct: 167 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 202
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 251
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
+GA D ++ V K LP
Sbjct: 252 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 275
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ V SA DLI + +L Y P+ R+ AR+AL H +
Sbjct: 276 KKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 309
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 57/224 (25%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLA 146
RY I+ +G+G+FG+V++C D ++ A+K++ NK + E+++L++L
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 147 RHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAFMHE 179
+I GG + + F + +Q+ + +MH+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
++H DLKPENILL S E K IK+IDFG +T
Sbjct: 140 HNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCFQ 175
Query: 240 QDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
Q+ + T +Y APEV+ G ++ CD+WS G IL L SG
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 189
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ DLWSVGCI+ E+ + LF
Sbjct: 190 ---------------YVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 233
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 234 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 289
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 290 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 327
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 142/336 (42%), Gaps = 112/336 (33%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
+I GG +R R +D R + RQ+L + +M
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYM 148
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
H+ +++H DLKPEN+LL S SKD + I++IDFG ST
Sbjct: 149 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 184
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 185 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 233
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
+GA D ++ V K LP
Sbjct: 234 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 257
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
+ V SA DLI + +L Y P+ R+ AR+AL H +
Sbjct: 258 KKVSESAKDLI---RKMLTYVPSMRISARDALDHEW 290
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
YVV TR+YRAPEVILG+G+ DLWSVGCI+ E+ + LF
Sbjct: 179 ---------------YVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 222
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 278
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 279 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 112/337 (33%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
+I GG +R R +D R + RQ+L + +M
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYM 142
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
H+ +++H DLKPEN+LL S SKD + I++IDFG ST
Sbjct: 143 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 178
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 227
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
+GA D ++ V K LP
Sbjct: 228 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 251
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ V SA DLI + +L Y P+ R+ AR+AL H +
Sbjct: 252 KKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 285
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 140/349 (40%), Gaps = 85/349 (24%)
Query: 84 FAIGENLTPRYRILSKMGEGTFG-----------------QVVECFD---NEKKELVAIK 123
F + ++ Y I+ +G G +G ++ FD N K+ L +K
Sbjct: 46 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 124 IVRSINKYREAAMIEI-------------DVLQRLARHDIGGTRYRSFPIDL--VRELGR 168
I++ A+ +I V+ L D+ + S P+ L VR
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY 165
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSS 225
QLL + +MH ++IH DLKP N+L+ +K+ D+ + L S + YF
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM------ 219
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL 284
+ V+TR YRAPE++L L + DLWSVGCI E+ + L
Sbjct: 220 -----------------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
F + L ++ VLG P VI+ A + +RA +
Sbjct: 263 FPGKNYVHQLQLIMMVLG-TPSPAVIQ--------------------AVGAERVRAYIQS 301
Query: 345 LRLPNLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
L + + D + LL +LR++P+ R+ A ALRHPF +
Sbjct: 302 LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMEPE----- 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
V TR+YRAPEVILG+G+ DLWSVGCI+ E+ + LF
Sbjct: 186 -----------------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
+
Sbjct: 329 K 329
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
+
Sbjct: 329 K 329
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 131 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 168
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 169 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 224
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 225 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 284
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 285 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 326
Query: 394 R 394
+
Sbjct: 327 K 327
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGP-----LPHHMVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG I D R R +R W
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
+
Sbjct: 329 K 329
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 169
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 170 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 226 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 286 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327
Query: 394 R 394
+
Sbjct: 328 K 328
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
+
Sbjct: 329 K 329
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 169
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 170 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 226 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 286 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327
Query: 394 R 394
+
Sbjct: 328 K 328
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 53/230 (23%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
++L+++ + H + ++H D+KP N++ + E+ K ++
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK-------------------------LR 172
Query: 229 LIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEAL 284
LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L + E
Sbjct: 173 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Query: 285 FQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
F H+N + L + +VLG + I D R R +R W S +
Sbjct: 233 FHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN--- 289
Query: 340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
QH+ + + +D L LLRYD RL AREA+ HP+F
Sbjct: 290 -------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
+
Sbjct: 329 K 329
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
+
Sbjct: 329 K 329
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 138 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 175
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 176 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 231
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 232 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 291
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 292 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 333
Query: 394 R 394
+
Sbjct: 334 K 334
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
S + QH+ + + +D L LLRYD RL AREA+ HP+F V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
+
Sbjct: 329 K 329
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 53/236 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R ++L+++ + H + ++H D+KP N++ + E+ K
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
++LID+G F H Q+++ V++R+++ PE+++ ++Y D+WS+GC+L +
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
E F H+N + L + +VLG + I D R R +R W
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
S + QH+ + + +D L LLRYD RL AREA+ HP+F
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 83/333 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLAR-- 147
+Y L K+GEGT+G V + + E E+VA+K VR + +A+ EI +L+ L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 148 ----HDIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHELRL 182
HD+ + + ++V+ QLL+ + F H +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
+H DLKP+N+L + ++ +KL +FG +
Sbjct: 123 LHRDLKPQNLL---------------------------INRNGELKLANFGLARAFGIPV 155
Query: 240 QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMM 297
+ +S V T YR P+V+ G ++ D+WS GCI EL +G LF ++ + L +
Sbjct: 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI 215
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R+LG WP D + + ++ V
Sbjct: 216 FRLLG-------------------TPTEEQWPSMTKLPDY--KPYPMYPATTSLVNVVPK 254
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L + +H +IH DLKP NI++ S +K+ D+ L+R++ G+ F P+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMEPE----- 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 186 -----------------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
+ ++ ++E++ P P M V KY +PD DS
Sbjct: 229 DYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+H A DLL +L D ++R+ EAL+HP+
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 135/333 (40%), Gaps = 83/333 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLAR-- 147
+Y L K+GEGT+G V + + E E+VA+K VR + +A+ EI +L+ L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 148 ----HDIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHELRL 182
HD+ + + ++V+ QLL+ + F H +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
+H DLKP+N+L + ++ +KL DFG +
Sbjct: 123 LHRDLKPQNLL---------------------------INRNGELKLADFGLARAFGIPV 155
Query: 240 QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMM 297
+ +S V T YR P+V+ G ++ D+WS GCI EL + LF ++ + L +
Sbjct: 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRI 215
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
R+LG WP D + + ++ V
Sbjct: 216 FRLLG-------------------TPTEEQWPSMTKLPDY--KPYPMYPATTSLVNVVPK 254
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 137/326 (42%), Gaps = 74/326 (22%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRLAR---- 147
Y L K+GEGT+ V + LVA+K +R ++ A+ E+ +L+ L
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 148 --HDIGGTR------YRSFPIDL---------------VRELGRQLLESVAFMHELRLIH 184
HDI T + DL V+ QLL +A+ H +++H
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLH 123
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DLKP+N+L+ +K+ D+ L+R+ K++P + T++++
Sbjct: 124 RDLKPQNLLINERGELKLADFG-LARA-------KSIP-----------TKTYDNE---- 160
Query: 245 VVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
V T YR P+++LG ++ D+W VGCI E+ +G LF E L + R+LG
Sbjct: 161 -VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGT 219
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
WP G S + + ++ H D
Sbjct: 220 PTEET-------------------WP-GILSNEEFKTYNYPKYRAEALLSHAPRLDSDGA 259
Query: 364 DLLQGLLRYDPAERLKAREALRHPFF 389
DLL LL+++ R+ A +A++HPFF
Sbjct: 260 DLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 95/348 (27%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRL---- 145
+Y L+K+G+GTFG+V + + + VA+K V N+ + A+ EI +LQ L
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 146 ----------------------------ARHDIGGTRYR---SFPIDLVRELGRQLLESV 174
HD+ G F + ++ + + LL +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
++H +++H D+K N+L+ ++DG +KL DFG
Sbjct: 139 YYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGL 171
Query: 234 ----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 286
S Q + Y V T YR PE++LG + P DLW GCI+ E+ + + Q
Sbjct: 172 ARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKL 344
+ LA++ ++ G + + D + +L+ G +D ++A +
Sbjct: 232 GNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR- 285
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
D A DLID LL DPA+R+ + +AL H FF D
Sbjct: 286 -----------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 140/337 (41%), Gaps = 112/337 (33%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
+ RY+ +G+G+FG+V+ C D + A+K++ R + + +E+ + E+ +L++L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
+I GG +R R +D R + RQ+L + +
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYX 142
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
H+ +++H DLKPEN+LL S SKD + I++IDFG ST
Sbjct: 143 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 178
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
FE + + T +Y APEV+ G ++ CD+WS G IL L SG F
Sbjct: 179 FEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 227
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
+GA D ++ V K LP
Sbjct: 228 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 251
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+ V SA DLI + L Y P+ R+ AR+AL H +
Sbjct: 252 KKVSESAKDLI---RKXLTYVPSXRISARDALDHEWI 285
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 95/348 (27%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRL---- 145
+Y L+K+G+GTFG+V + + + VA+K V N+ + A+ EI +LQ L
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 146 ----------------------------ARHDIGGTRYR---SFPIDLVRELGRQLLESV 174
HD+ G F + ++ + + LL +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
++H +++H D+K N+L+ ++DG +KL DFG
Sbjct: 138 YYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGL 170
Query: 234 ----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 286
S Q + Y V T YR PE++LG + P DLW GCI+ E+ + + Q
Sbjct: 171 ARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 230
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKL 344
+ LA++ ++ G + + D + +L+ G +D ++A +
Sbjct: 231 GNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR- 284
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
D A DLID LL DPA+R+ + +AL H FF D
Sbjct: 285 -----------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 318
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 95/348 (27%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRL---- 145
+Y L+K+G+GTFG+V + + + VA+K V N+ + A+ EI +LQ L
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 146 ----------------------------ARHDIGGTRYR---SFPIDLVRELGRQLLESV 174
HD+ G F + ++ + + LL +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
++H +++H D+K N+L+ ++DG +KL DFG
Sbjct: 139 YYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGL 171
Query: 234 ----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 286
S Q + Y V T YR PE++LG + P DLW GCI+ E+ + + Q
Sbjct: 172 ARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKL 344
+ LA++ ++ G + + D + +L+ G +D ++A +
Sbjct: 232 GNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR- 285
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
D A DLID LL DPA+R+ + +AL H FF D
Sbjct: 286 -----------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 95/348 (27%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRL---- 145
+Y L+K+G+GTFG+V + + + VA+K V N+ + A+ EI +LQ L
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 146 ----------------------------ARHDIGGTRYR---SFPIDLVRELGRQLLESV 174
HD+ G F + ++ + + LL +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
++H +++H D+K N+L+ ++DG +KL DFG
Sbjct: 139 YYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGL 171
Query: 234 ----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 286
S Q + Y V T YR PE++LG + P DLW GCI+ E+ + + Q
Sbjct: 172 ARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKL 344
+ LA++ ++ G + + D + +L+ G +D ++A +
Sbjct: 232 GNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR- 285
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
D A DLID LL DPA+R+ + +AL H FF D
Sbjct: 286 -----------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 159/362 (43%), Gaps = 71/362 (19%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI--EIDVLQRLARH- 148
Y I +G G++G V +D ++ VAIK V R + I EI +L RL
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 149 -----------------------DIGGTRYRSF---PIDLVRELGRQLLESV----AFMH 178
+I + + PI L E + +L ++ F+H
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSR---SSKDGSYFKNLPKSSAIKLIDFGST 235
E +IH DLKP N LL VKV D+ L+R S KD + +L ++ +
Sbjct: 147 ESGIIHRDLKPANCLLNQDCSVKVCDFG-LARTINSEKDTNIVNDLEENEEPGP---HNK 202
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEH 293
+ Q S+VV TR YRAPE+IL L NY D+WS GCI EL + + Q+H N
Sbjct: 203 NLKKQLTSHVV-TRWYRAPELIL-LQENYTKSIDIWSTGCIFAELLN---MLQSHIN--- 254
Query: 294 LAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPD------GATSRDSMR-----AV 341
R L P + DR ++K + R D + G + D ++ V
Sbjct: 255 -DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNR-DQLNIIFNIIGTPTEDDLKNINKPEV 312
Query: 342 WKLLRL-----PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
K ++L P + Q + D I+LL+ +L+++P +R+ +AL HP+ +DVR+
Sbjct: 313 IKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL-KDVRKK 371
Query: 397 TL 398
L
Sbjct: 372 KL 373
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 144/343 (41%), Gaps = 105/343 (30%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMI 137
G ++ + +L+ Y+ + K+G G +G+V+ C D AIKI+R S++ + ++
Sbjct: 25 GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 138 E-IDVLQRLARHDI---------------------GGT-------RYRSFPIDLVRELGR 168
E + VL+ L +I GG R + +D + +
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-IIK 143
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+L V ++H+ ++H DLKPEN+LL S E K + IK
Sbjct: 144 QVLSGVTYLHKHNIVHRDLKPENLLLESKE------------------------KDALIK 179
Query: 229 LIDFG-STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
++DFG S FE+Q + T +Y APEV L ++ CD+WS+G IL L +G F
Sbjct: 180 IVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFG 238
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
+ E L R+ EK G + DS WK
Sbjct: 239 GQTDQEIL-------------------RKVEK------------GKYTFDSPE--WK--- 262
Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
+V A DLI + +L++D R+ A++AL HP+
Sbjct: 263 -------NVSEGAKDLI---KQMLQFDSQRRISAQQALEHPWI 295
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
Y ++ K+G G + +V E + E I IV+ +
Sbjct: 54 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 113
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 114 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 173
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 174 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 207
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLG-- 302
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 208 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 267
Query: 303 ---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 268 GLNAYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 309
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 310 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKE-------------------------LVAIKIVRSI 128
Y ++ K+G G + +V E + E + IV+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
Y ++ K+G G + +V E + E I IV+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
Y ++ K+G G + +V E + E I IV+ +
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 93
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 94 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 154 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 289
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
Y ++ K+G G + +V E + E I IV+ +
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 93
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 94 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 154 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 289
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
Y ++ K+G G + +V E + E I IV+ +
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 94
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 95 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 154
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 155 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 188
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 189 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 248
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 249 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 290
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 291 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
Y ++ K+G G + +V E + E I IV+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
Y ++ K+G G + +V E + E I IV+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
Y ++ K+G G + +V E + E I IV+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
Y ++ K+G G + +V E + E I IV+ +
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
+ R+ ++ + Y + +R +LL+++ + H ++H D+K
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ D++ ++LID+G F H ++++ V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
++R+++ PE+++ L ++Y D+WS+GC+ + E F H+N + L + +VLG
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ I D + E R +R W L+ N QH+ +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ ID L LLRYD ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 125/309 (40%), Gaps = 92/309 (29%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEI---------------DV 141
+GEG+F +C + + A+KI+ N +E +++ D
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ 78
Query: 142 LQRLARHDI--GGTRY------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL 193
L ++ GG + + F + R+L+ +V+ MH++ ++H DLKPEN+L
Sbjct: 79 LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLL 138
Query: 194 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS---TRH 250
F + + IK+IDFG + D+ + + T H
Sbjct: 139 ------------------------FTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH 174
Query: 251 YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVI 310
Y APE++ G++ CDLWS+G IL + SG+ FQ+H +R L ++
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH---------DRSLTCTSAVEIM 225
Query: 311 RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL 370
+ ++ + F A WK +V A DLI QGLL
Sbjct: 226 KKIKKGDFSFEGEA-----------------WK----------NVSQEAKDLI---QGLL 255
Query: 371 RYDPAERLK 379
DP +RLK
Sbjct: 256 TVDPNKRLK 264
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 47/250 (18%)
Query: 157 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P +V+ L Q+L+ + ++H ++H DLKP NIL++
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG------------------ 165
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLW 269
P+ +K+ D G + D VV T YRAPE++LG + D+W
Sbjct: 166 -----PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW 220
Query: 270 SVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRG 323
++GCI EL + E +F + N H ++R+ M AD+ E +
Sbjct: 221 AIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV----MGFPADKDWEDIKKM- 275
Query: 324 ARLDWPDGAT-SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 382
P+ +T +D R + L + +H LLQ LL DP +R+ + +
Sbjct: 276 -----PEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330
Query: 383 ALRHPFFTRD 392
A++ P+F D
Sbjct: 331 AMQDPYFLED 340
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 70/326 (21%)
Query: 94 YRILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAAMIE-----------I 139
Y+++ K+G G + +V E +NE+ + +K V+ RE ++E I
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKLI 99
Query: 140 DVLQ-------RLARHDIGGTRYRSFPIDL----VRELGRQLLESVAFMHELRLIHTDLK 188
D ++ L I T ++ L +R +LL+++ + H ++H D+K
Sbjct: 100 DTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVK 159
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ + ++LID+G F H Q+++ V
Sbjct: 160 PHNVMIDH--------------------------QQKKLRLIDWGLAEFYHPAQEYNVRV 193
Query: 247 STRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 304
++R+++ PE+++ ++Y D+WS+GC+L + E F +N + L + +VLG
Sbjct: 194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE 253
Query: 305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLI 363
+ ++ + LD R W+ N I H + +
Sbjct: 254 ELYGYLK---------KYHIDLDPHFNDILGQHSRKRWE-----NFIHSENRHLVSPEAL 299
Query: 364 DLLQGLLRYDPAERLKAREALRHPFF 389
DLL LLRYD +RL A+EA+ HP+F
Sbjct: 300 DLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 70/326 (21%)
Query: 94 YRILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAAMIE-----------I 139
Y+++ K+G G + +V E +NE+ + +K V+ RE ++E I
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKLI 104
Query: 140 DVLQ-------RLARHDIGGTRYRSFPIDL----VRELGRQLLESVAFMHELRLIHTDLK 188
D ++ L I T ++ L +R +LL+++ + H ++H D+K
Sbjct: 105 DTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVK 164
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
P N+++ + ++LID+G F H Q+++ V
Sbjct: 165 PHNVMIDH--------------------------QQKKLRLIDWGLAEFYHPAQEYNVRV 198
Query: 247 STRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 304
++R+++ PE+++ ++Y D+WS+GC+L + E F +N + L + +VLG
Sbjct: 199 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE 258
Query: 305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLI 363
+ ++ + LD R W+ N I H + +
Sbjct: 259 ELYGYLK---------KYHIDLDPHFNDILGQHSRKRWE-----NFIHSENRHLVSPEAL 304
Query: 364 DLLQGLLRYDPAERLKAREALRHPFF 389
DLL LLRYD +RL A+EA+ HP+F
Sbjct: 305 DLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 146/374 (39%), Gaps = 92/374 (24%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI--EIDVLQRLARHD 149
Y I +G G++G V +D + VAIK V R + I EI +L RL
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 150 IGGTRYRSFPIDL-------------------------------VRELGRQLLESVAFMH 178
I P DL V+ + LL F+H
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSR---SSKDGSYFKNLPKSSAIKLIDFGST 235
E +IH DLKP N LL VK+ D+ L+R S KD +L + + +
Sbjct: 149 ESGIIHRDLKPANCLLNQDCSVKICDFG-LARTINSDKDIHIVNDLEEKEENEEPGPHNK 207
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCS------------- 280
+ Q S+VV TR YRAPE+IL L NY D+WS GCI EL +
Sbjct: 208 NLKKQLTSHVV-TRWYRAPELIL-LQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRF 265
Query: 281 ----GEALF---------QTHE--NLEHLAMMERVLGPLPHH-MVIRADRRAEKYFRRGA 324
G + F + HE N + L ++ V+G P + + KY +
Sbjct: 266 PLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFP 325
Query: 325 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
D D + S+ + + IDLL+ +LR++ +R+ +AL
Sbjct: 326 TRDGIDLSKKYSSI--------------------SKEGIDLLESMLRFNAQKRITIDKAL 365
Query: 385 RHPFFTRDVRRPTL 398
HP+ +DVR+ L
Sbjct: 366 SHPYL-KDVRKENL 378
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 131/337 (38%), Gaps = 104/337 (30%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQ 143
+ L+ RY+ + K+G G +G+V+ C D AIKI++ + A + E+ VL+
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 144 RLARHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAF 176
+L +I GG + + F + +Q+L +
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 235
+H+ ++H DLKPEN+LL S S+D + IK++DFG S
Sbjct: 137 LHKHNIVHRDLKPENLLLES--------------KSRD----------ALIKIVDFGLSA 172
Query: 236 TFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
FE + T +Y APEV L ++ CD+WS G IL L G F + E L
Sbjct: 173 HFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL 231
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
+E+ G D PD D + + KL
Sbjct: 232 KRVEK--GKFS--------------------FDPPDWTQVSDEAKQLVKL---------- 259
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+L Y+P++R+ A EAL HP+ +
Sbjct: 260 --------------MLTYEPSKRISAEEALNHPWIVK 282
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 147/336 (43%), Gaps = 63/336 (18%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRL 145
G +L RY L +G G G V DN+ + VAIK IV + + + A+ EI +++RL
Sbjct: 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 146 ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIH-------TDLKPENILL---V 195
+I +++ G QL + V + EL ++ TDL N+L +
Sbjct: 66 DHDNIVKV------FEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLA--NVLEQGPL 117
Query: 196 SAEYVKVPDYKFL------------SRSSKDGSYFKNLPKSSAIKLIDFG-----STTFE 238
E+ ++ Y+ L R K + F N + +K+ DFG +
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN-TEDLVLKIGDFGLARIMDPHYS 176
Query: 239 HQDH-SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
H+ H S + T+ YR+P ++L + D+W+ GCI E+ +G+ LF LE
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ--- 233
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR--LPNLIMQH 354
M+ +L +P V+ + R E + R+ M K L LP +
Sbjct: 234 MQLILESIP---VVHEEDRQELLSVIPVYI--------RNDMTEPHKPLTQLLPGI---- 278
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+ + +D L+ +L + P +RL A EAL HP+ +
Sbjct: 279 ----SREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 134/354 (37%), Gaps = 111/354 (31%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRL 145
L+ RY+ + K+G G +G+V+ C D AIKI++ + A + E+ VL++L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 146 ARHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAFMH 178
+I GG + + F + +Q+L ++H
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 237
+ ++H DLKPEN+LL S + + IK++DFG S F
Sbjct: 122 KHNIVHRDLKPENLLLESK------------------------SRDALIKIVDFGLSAHF 157
Query: 238 E-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
E + T +Y APEV L ++ CD+WS G IL L G F + E L
Sbjct: 158 EVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKR 216
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
+E+ G D PD D + + KL
Sbjct: 217 VEK--GKFS--------------------FDPPDWTQVSDEAKQLVKL------------ 242
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR-------DVRRPTLLVATG 403
+L Y+P++R+ A EAL HP+ + DV + L A G
Sbjct: 243 ------------MLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALG 284
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 49/264 (18%)
Query: 131 YREAAMIEIDVLQRLARHDIGGTRYRSFPI---DLVRELGRQLLESVAFMHELRLIHTDL 187
+ E AM ++ ++ L R D+ + + ++ +L + +HE ++H DL
Sbjct: 101 FEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDL 160
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
P NILL + + D+ + D + ++ V+
Sbjct: 161 HPGNILLADNNDITICDFNLAREDTADA-------------------------NKTHYVT 195
Query: 248 TRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG-PLP 305
R YRAPE+++ G+ D+WS GC++ E+ + +ALF+ L + V+G P
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL 365
+V+ + A Y R + S RA W ++ D A +DL
Sbjct: 256 EDVVMFSSPSARDYLR---------NSLSNVPARA-W------TAVVPTADPVA---LDL 296
Query: 366 LQGLLRYDPAERLKAREALRHPFF 389
+ +L ++P R+ +ALRHP+F
Sbjct: 297 IAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 49/264 (18%)
Query: 131 YREAAMIEIDVLQRLARHDIGGTRYRSFPI---DLVRELGRQLLESVAFMHELRLIHTDL 187
+ E AM ++ ++ L R D+ + + ++ +L + +HE ++H DL
Sbjct: 101 FEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDL 160
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
P NILL + + D+ + D + ++ V+
Sbjct: 161 HPGNILLADNNDITICDFNLAREDTADA-------------------------NKTHYVT 195
Query: 248 TRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG-PLP 305
R YRAPE+++ G+ D+WS GC++ E+ + +ALF+ L + V+G P
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL 365
+V+ + A Y R + S RA W ++ D A +DL
Sbjct: 256 EDVVMFSSPSARDYLR---------NSLSNVPARA-W------TAVVPTADPVA---LDL 296
Query: 366 LQGLLRYDPAERLKAREALRHPFF 389
+ +L ++P R+ +ALRHP+F
Sbjct: 297 IAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 53/217 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-------- 145
+ +L K+GEG++G V + E ++VAIK V + +E + EI ++Q+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI-IKEISIMQQCDSPHVVKY 89
Query: 146 --------------------ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
+ DI R ++ D + + + L+ + ++H +R IH
Sbjct: 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHR 149
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
D+K NILL + + K+ D+ G T + V
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVA------------------------GQLTDXMAKRNXV 185
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
+ T + APEVI +G+N D+WS+G +E+ G+
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 123/333 (36%), Gaps = 108/333 (32%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLAR--- 147
Y IL ++G G FG V C + + K + + ++KY EI ++ +L
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHHPKL 110
Query: 148 ---HD-----------------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELR 181
HD I Y+ +++ + RQ E + MHE
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-RQACEGLKHMHEHS 169
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
++H D+KPENI+ + K+S++K+IDFG T + D
Sbjct: 170 IVHLDIKPENIMCETK-------------------------KASSVKIIDFGLATKLNPD 204
Query: 242 H--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
+T + APE++ + D+W++G + L SG + F ++LE L ++R
Sbjct: 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR 264
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
DW D+ +V +
Sbjct: 265 C--------------------------DW---EFDEDAFSSV-----------------S 278
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
+ D ++ LL+ +P +RL +AL HP+ D
Sbjct: 279 PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 123/338 (36%), Gaps = 115/338 (34%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY------------REAAMIEI-- 139
Y + +G+G F V C + E + A+KIV + K+ REA++ +
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 140 --DVLQRLARHDIGGTRYRSFPI----DLVREL------------------GRQLLESVA 175
+++ L + G Y F DL E+ RQ+LE++
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
+ H+ +IH D+KPEN+LL S E S+ +KL DFG
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKE------------------------NSAPVKLGDFG-V 179
Query: 236 TFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
+ + V V T H+ APEV+ + P D+W G IL L S
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----------- 228
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
G LP + G R + ++
Sbjct: 229 ----------GCLPFY-----------------------GTKERLFEGIIKGKYKMNPRQ 255
Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
H+ SA DL+ + +L DPAER+ EAL HP+
Sbjct: 256 WSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 290
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 129/334 (38%), Gaps = 103/334 (30%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
+ L+ + + S++G G V C ++ A+K+++ ++ EI VL RL+
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSH 107
Query: 148 HDIGGTRY---RSFPIDLVRELG------------------------RQLLESVAFMHEL 180
+I + I LV EL +Q+LE+VA++HE
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
++H DLKPEN+L + PD + +K+ DFG S EH
Sbjct: 168 GIVHRDLKPENLLYATP----APD--------------------APLKIADFGLSKIVEH 203
Query: 240 QD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMM 297
Q V T Y APE++ G + D+WSVG I + LC E +
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY------------ 251
Query: 298 ERVLGPLPHHMVIRADRRAEKY-FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
D R +++ FRR ++ I D
Sbjct: 252 ---------------DERGDQFMFRRILNCEY--------------------YFISPWWD 276
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
+ + DL++ L+ DP +RL +AL+HP+ T
Sbjct: 277 EVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 11 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 65
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
+H R + I +V E G + +LE+V +H
Sbjct: 66 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 126 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 157
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
D + V V T +Y PE I + + D+WS+GCIL + G+
Sbjct: 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
FQ + + ++ + ++ P +++PD
Sbjct: 218 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 244
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
+P DL D+L+ L+ DP +R+ E L HP+ P +A
Sbjct: 245 ----IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 289
Query: 403 GET 405
G T
Sbjct: 290 GTT 292
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
+H R + I +V E G + +LE+V +H
Sbjct: 113 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 173 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 204
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
D + V V T +Y PE I + + D+WS+GCIL + G+
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
FQ + + ++ + ++ P +++PD
Sbjct: 265 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 291
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
+P DL D+L+ L+ DP +R+ E L HP+ P +A
Sbjct: 292 ----IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 336
Query: 403 GET 405
G T
Sbjct: 337 GTT 339
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
+H R + I +V E G + +LE+V +H
Sbjct: 113 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 173 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 204
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
D + V V T +Y PE I + + D+WS+GCIL + G+
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
FQ + + ++ + ++ P +++PD
Sbjct: 265 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 291
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
+P DL D+L+ L+ DP +R+ E L HP+ P +A
Sbjct: 292 ----IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 336
Query: 403 GET 405
G T
Sbjct: 337 GTT 339
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 121/307 (39%), Gaps = 70/307 (22%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------------- 126
G YV + Y + K+G G +G+V+ C + AIK+++
Sbjct: 24 GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 127 -SINKYREAAMIEIDVLQRLARHDI---------------------GG-------TRYRS 157
+I K+ E EI +L+ L +I GG R++
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF 143
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
D + +Q+L + ++H+ ++H D+KPENILL
Sbjct: 144 DECDAAN-IMKQILSGICYLHKHNIVHRDIKPENILL----------------------- 179
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 275
+N IK++DFG ++F +D+ + T +Y APEV L +N CD+WS G I+
Sbjct: 180 -ENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIM 237
Query: 276 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 335
L G F + + + +E+ + A++ + D+ T+
Sbjct: 238 YILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAE 297
Query: 336 DSMRAVW 342
+++ + W
Sbjct: 298 EALNSRW 304
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 14 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 68
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
+H R + I +V E G + +LE+V +H
Sbjct: 69 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 128
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 129 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 160
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
D + V V T +Y PE I + + D+WS+GCIL + G+
Sbjct: 161 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
FQ + + ++ + ++ P +++PD
Sbjct: 221 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 247
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
+P DL D+L+ L+ DP +R+ E L HP+ P +A
Sbjct: 248 ----IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 292
Query: 403 GET 405
G T
Sbjct: 293 GTT 295
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 66/221 (29%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-----EAAMIEIDVLQRLARHDI--- 150
K+G G FG V E++ +++++INK R E EI+VL+ L +I
Sbjct: 29 KLGSGAFGDVHLV---EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 151 ------------------GG----------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
GG R ++ V EL +Q++ ++A+ H +
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQD 241
+H DLKPENIL F++ S IK+IDFG + F+ +
Sbjct: 146 VHKDLKPENIL------------------------FQDTSPHSPIKIIDFGLAELFKSDE 181
Query: 242 HSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
HS T Y APEV + CD+WS G ++ L +G
Sbjct: 182 HSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 30 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
+H R + I +V E G + +LE+V +H
Sbjct: 85 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 145 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 176
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
D + V V T +Y PE I + + D+WS+GCIL + G+
Sbjct: 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
FQ + + ++ + ++ P +++PD
Sbjct: 237 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 263
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
+P DL D+L+ L+ DP +R+ E L HP+ P +A
Sbjct: 264 ----IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 308
Query: 403 GET 405
G T
Sbjct: 309 GTT 311
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 130/342 (38%), Gaps = 111/342 (32%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAIKI+ +I REA EI++L++L
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
I + + + +V EL Q+L +V ++HE
Sbjct: 73 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
+IH DLKPEN+LL S E + IK+ DFG +
Sbjct: 133 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 168
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
E + T Y APEV++ + G+N D WS+G IL SG F H
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 224
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
+ ++ + KY + + VW
Sbjct: 225 ------------QVSLKDQITSGKY----------------NFIPEVW----------AE 246
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
V A +DL++ LL DP R EALRHP+ D++R
Sbjct: 247 VSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 52/214 (24%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
L ++G+G+FG+V + DN KE+VAIKI+ E EI VL + I
Sbjct: 24 LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 152 GTRYRSFPIDLVRE-LG----------------------RQLLESVAFMHELRLIHTDLK 188
G+ +S + ++ E LG R++L+ + ++H R IH D+K
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+LL VK+ D+ G T + V T
Sbjct: 144 AANVLLSEQGDVKLADFGVA------------------------GQLTDTQIKRNXFVGT 179
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
+ APEVI +++ D+WS+G +EL GE
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 130/360 (36%), Gaps = 116/360 (32%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA- 134
G ++ + L Y + +G G G+V F+ + + VAIKI+ +I REA
Sbjct: 4 GSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 63
Query: 135 ----AMIEIDVLQRLAR-----------------------------HDIGGTRYRSFPID 161
EI++L++L +G R +
Sbjct: 64 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK 123
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
L Q+L +V ++HE +IH DLKPEN+LL S E
Sbjct: 124 LYF---YQMLLAVQYLHENGIIHRDLKPENVLLSSQE----------------------- 157
Query: 222 PKSSAIKLIDFGSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILV 276
+ IK+ DFG + E + T Y APEV++ + G+N D WS+G IL
Sbjct: 158 -EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
Query: 277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 336
SG F H + ++ + KY +
Sbjct: 217 ICLSGYPPFSEHRT----------------QVSLKDQITSGKY----------------N 244
Query: 337 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
+ VW V A +DL++ LL DP R EALRHP+ D++R
Sbjct: 245 FIPEVW----------AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 291
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 130/342 (38%), Gaps = 111/342 (32%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAIKI+ +I REA EI++L++L
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
I + + + +V EL Q+L +V ++HE
Sbjct: 73 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
+IH DLKPEN+LL S E + IK+ DFG +
Sbjct: 133 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 168
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
E + T Y APEV++ + G+N D WS+G IL SG F H
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 224
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
+ ++ + KY + + VW
Sbjct: 225 ------------QVSLKDQITSGKY----------------NFIPEVW----------AE 246
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
V A +DL++ LL DP R EALRHP+ D++R
Sbjct: 247 VSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 130/342 (38%), Gaps = 111/342 (32%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAIKI+ +I REA EI++L++L
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
I + + + +V EL Q+L +V ++HE
Sbjct: 73 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
+IH DLKPEN+LL S E + IK+ DFG +
Sbjct: 133 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 168
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
E + T Y APEV++ + G+N D WS+G IL SG F H
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 224
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
+ ++ + KY + + VW
Sbjct: 225 ------------QVSLKDQITSGKY----------------NFIPEVW----------AE 246
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
V A +DL++ LL DP R EALRHP+ D++R
Sbjct: 247 VSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 61/236 (25%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDV 141
+G N +RI K+G G F +V VA+K V+ + K R + EID+
Sbjct: 26 MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 142 LQRLARHDIGGTRYRSF----PIDLVRELGR----------------------------Q 169
L++L ++ Y SF +++V EL Q
Sbjct: 86 LKQLNHPNVI-KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
L ++ MH R++H D+KP N+ + + VK+ D G +F +
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS--------- 188
Query: 230 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
TT H +V T +Y +PE I G+N+ D+WS+GC+L E+ + ++ F
Sbjct: 189 ----KTTAAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 130/342 (38%), Gaps = 111/342 (32%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAIKI+ +I REA EI++L++L
Sbjct: 12 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 71
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
I + + + +V EL Q+L +V ++HE
Sbjct: 72 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
+IH DLKPEN+LL S E + IK+ DFG +
Sbjct: 132 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 167
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
E + T Y APEV++ + G+N D WS+G IL SG F H
Sbjct: 168 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 223
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
+ ++ + KY + + VW
Sbjct: 224 ------------QVSLKDQITSGKY----------------NFIPEVW----------AE 245
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
V A +DL++ LL DP R EALRHP+ D++R
Sbjct: 246 VSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 284
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 133/363 (36%), Gaps = 132/363 (36%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 30 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
+H R + I +V E G + +LE+V +H
Sbjct: 85 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 145 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 176
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
D V V T +Y PE I + + D+WS+GCIL + G+
Sbjct: 177 QPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
FQ + + ++ + ++ P +++PD
Sbjct: 237 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 263
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
+P DL D+L+ L+ DP +R+ E L HP+ P +A
Sbjct: 264 ----IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 308
Query: 403 GET 405
G T
Sbjct: 309 GTT 311
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 10 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 64
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
+H R + I +V E G + +LE+V +H
Sbjct: 65 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 124
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 125 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 156
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
D + V V T +Y PE I + + D+WS+GCIL + G+
Sbjct: 157 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
FQ + + ++ + ++ P +++PD
Sbjct: 217 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 243
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
+P DL D+L+ L+ DP +R+ E L HP+ P +A
Sbjct: 244 ----IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 288
Query: 403 GET 405
G T
Sbjct: 289 GTT 291
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 133/363 (36%), Gaps = 132/363 (36%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
Y IL ++G G +V + NEKK++ AIK V ++++ YR EI L +L
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
+H R + I +V E G + +LE+V +H
Sbjct: 113 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+ ++H+DLKP N L+V DG +KLIDFG
Sbjct: 173 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 204
Query: 239 HQDHSYVVSTR-----HYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
D + VV +Y PE I + + D+WS+GCIL + G+
Sbjct: 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
FQ + + ++ + ++ P +++PD
Sbjct: 265 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 291
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
+P DL D+L+ L+ DP +R+ E L HP+ P +A
Sbjct: 292 ----IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 336
Query: 403 GET 405
G T
Sbjct: 337 GTT 339
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 126/338 (37%), Gaps = 101/338 (29%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
E++ Y +G G F +V+ D ++LVAIK I + + +E +M EI VL +
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 145 LARHDI---------GGTRYRSFPI-------DLVRELGR-----------QLLESVAFM 177
+ +I GG Y + D + E G Q+L++V ++
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
H+L ++H DLKPEN+L + +L + S I + DFG +
Sbjct: 133 HDLGIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKM 168
Query: 238 EHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
E S T Y APEV+ ++ D WS+G I L G F + +
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--- 225
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
+ E++L +AE F D D A
Sbjct: 226 LFEQIL-------------KAEYEFDSPYWDDISDSAK---------------------- 250
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
D ++ L+ DP +R +AL+HP+ D
Sbjct: 251 --------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 63/290 (21%)
Query: 81 HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYRE 133
H+V A E P + +L +G+G+FG+V + + L A+K+++ + R
Sbjct: 16 HHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 134 AAMIEIDVLQRLAR------HDIGGTRYRSFPI-------DLVRELGRQLL---ESVAF- 176
+E D+L + H T + + I DL L ++++ E V F
Sbjct: 76 RTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 135
Query: 177 ----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
+H L +I+ DLKPENILL ++K+ D+ LS+ + D
Sbjct: 136 LAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKEAID------------ 182
Query: 227 IKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
H+ +Y T Y APEV+ G ++ D WS G ++ E+ +G F
Sbjct: 183 ------------HEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL-DWPDGA 332
Q + E + ++ + +P + A F+R RL PDGA
Sbjct: 231 QGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGA 280
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 130/350 (37%), Gaps = 113/350 (32%)
Query: 86 IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
+ +L P + I+ ++G+G FG+V + + E L A K++ + ++ E M+EID+L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDI--------------------GGTRYRSFPIDLVRELG--------RQLLESV 174
+I G + ++L R L +Q L+++
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
++H+ ++IH DLK NIL + DG IKL DFG
Sbjct: 149 NYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKLADFGV 181
Query: 235 T---TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQ 286
+ T Q + T ++ APEV++ ++Y D+WS+G L+E+ E
Sbjct: 182 SAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP--- 238
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
PHH + + MR + K+ +
Sbjct: 239 ------------------PHHEL--------------------------NPMRVLLKIAK 254
Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
+ + + D L+ L + R + L+HPF T D +P
Sbjct: 255 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 130/350 (37%), Gaps = 113/350 (32%)
Query: 86 IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
+ +L P + I+ ++G+G FG+V + + E L A K++ + ++ E M+EID+L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDI--------------------GGTRYRSFPIDLVRELG--------RQLLESV 174
+I G + ++L R L +Q L+++
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
++H+ ++IH DLK NIL + DG IKL DFG
Sbjct: 149 NYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKLADFGV 181
Query: 235 T---TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQ 286
+ T Q + T ++ APEV++ ++Y D+WS+G L+E+ E
Sbjct: 182 SAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP--- 238
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
PHH + + MR + K+ +
Sbjct: 239 ------------------PHHEL--------------------------NPMRVLLKIAK 254
Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
+ + + D L+ L + R + L+HPF T D +P
Sbjct: 255 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 129/340 (37%), Gaps = 105/340 (30%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
E++ Y +G G F +V+ D ++LVAIK I + + +E +M EI VL +
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDI---------GGTRYRSFPI-------DLVRELGR-----------QLLESVAFM 177
+ +I GG Y + D + E G Q+L++V ++
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
H+L ++H DLKPEN+L + +L + S I + DFG +
Sbjct: 133 HDLGIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKM 168
Query: 238 EHQDHSYVVSTR----HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
E D V+ST Y APEV+ ++ D WS+G I L G F + +
Sbjct: 169 E--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK- 225
Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
+ E++L +AE F D D A
Sbjct: 226 --LFEQIL-------------KAEYEFDSPYWDDISDSAK-------------------- 250
Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
D ++ L+ DP +R +AL+HP+ D
Sbjct: 251 ----------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 118/300 (39%), Gaps = 81/300 (27%)
Query: 51 GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRI-------LSKMGEG 103
G+ A + M + R+GSP ++ A P++R+ L +G+G
Sbjct: 109 GLKKQAAAEMDF----RSGSPSDNSGAEEMEVSLA-----KPKHRVTMNEFEYLKLLGKG 159
Query: 104 TFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDI--------- 150
TFG+V+ + A+KI++ I E A + E VLQ +RH
Sbjct: 160 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQ 218
Query: 151 -------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPE 190
GG +R R F D R G +++ ++ ++H E +++ DLK E
Sbjct: 219 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 278
Query: 191 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRH 250
N++L ++K+ D+ KDG+ K T
Sbjct: 279 NLMLDKDGHIKITDFGLCKEGIKDGATMKTF------------------------CGTPE 314
Query: 251 YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME-----RVLGP 303
Y APEV+ + D W +G ++ E+ G F Q HE L L +ME R LGP
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP 374
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
R ++ R RQ++ ++H R+IH DLK
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+ L VK+ D+ ++ DG K L T
Sbjct: 149 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL------------------------CGT 184
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
+Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 223
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 130/350 (37%), Gaps = 113/350 (32%)
Query: 86 IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
+ +L P + I+ ++G+G FG+V + + E L A K++ + ++ E M+EID+L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDI--------------------GGTRYRSFPIDLVRELG--------RQLLESV 174
+I G + ++L R L +Q L+++
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
++H+ ++IH DLK NIL + DG IKL DFG
Sbjct: 149 NYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKLADFGV 181
Query: 235 T---TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQ 286
+ T Q + T ++ APEV++ ++Y D+WS+G L+E+ E
Sbjct: 182 SAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP--- 238
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
PHH + + MR + K+ +
Sbjct: 239 ------------------PHHEL--------------------------NPMRVLLKIAK 254
Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
+ + + D L+ L + R + L+HPF T D +P
Sbjct: 255 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 128/342 (37%), Gaps = 111/342 (32%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAI+I+ +I REA EI++L++L
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
I + + + +V EL Q+L +V ++HE
Sbjct: 198 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
+IH DLKPEN+LL S E + IK+ DFG +
Sbjct: 258 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 293
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
E + T Y APEV++ + G+N D WS+G IL SG F H
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 349
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
+ ++ + KY N I +
Sbjct: 350 ------------QVSLKDQITSGKY-----------------------------NFIPEV 368
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
+ +DL++ LL DP R EALRHP+ D++R
Sbjct: 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 126/338 (37%), Gaps = 101/338 (29%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
E++ Y +G G F +V+ D ++LVAIK I + + +E +M EI VL +
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDI---------GGTRYRSFPI-------DLVRELGR-----------QLLESVAFM 177
+ +I GG Y + D + E G Q+L++V ++
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
H+L ++H DLKPEN+L + +L + S I + DFG +
Sbjct: 133 HDLGIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKM 168
Query: 238 EHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
E S T Y APEV+ ++ D WS+G I L G F + +
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--- 225
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
+ E++L +AE F D D A
Sbjct: 226 LFEQIL-------------KAEYEFDSPYWDDISDSAK---------------------- 250
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
D ++ L+ DP +R +AL+HP+ D
Sbjct: 251 --------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 128/342 (37%), Gaps = 111/342 (32%)
Query: 96 ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
I+SK +G G G+V F+ + + VAI+I+ +I REA EI++L++L
Sbjct: 152 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 211
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
I + + + +V EL Q+L +V ++HE
Sbjct: 212 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
+IH DLKPEN+LL S E + IK+ DFG +
Sbjct: 272 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 307
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
E + T Y APEV++ + G+N D WS+G IL SG F H
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 363
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
+ ++ + KY N I +
Sbjct: 364 ------------QVSLKDQITSGKY-----------------------------NFIPEV 382
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
+ +DL++ LL DP R EALRHP+ D++R
Sbjct: 383 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 424
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 129/340 (37%), Gaps = 105/340 (30%)
Query: 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
E++ Y +G G F +V+ D ++LVAIK I + + +E +M EI VL +
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDI---------GGTRYRSFPI-------DLVRELGR-----------QLLESVAFM 177
+ +I GG Y + D + E G Q+L++V ++
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
H+L ++H DLKPEN+L + +L + S I + DFG +
Sbjct: 133 HDLGIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKM 168
Query: 238 EHQDHSYVVSTR----HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
E D V+ST Y APEV+ ++ D WS+G I L G F + +
Sbjct: 169 E--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK- 225
Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
+ E++L +AE F D D A
Sbjct: 226 --LFEQIL-------------KAEYEFDSPYWDDISDSAK-------------------- 250
Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
D ++ L+ DP +R +AL+HP+ D
Sbjct: 251 ----------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
R ++ R RQ++ ++H R+IH DLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+ L VK+ D+ ++ DG K L T
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL------------------------CGT 180
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
+Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
R ++ R RQ++ ++H R+IH DLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+ L VK+ D+ ++ DG K L T
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL------------------------CGT 180
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
+Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 65/250 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
+ L +G+GTFG+V+ + A+KI++ I E A + E VLQ +RH
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 211
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-EL 180
GG +R R F D R G +++ ++ ++H E
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
+++ DLK EN++L ++K+ D+ KDG+ K
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF------------------- 312
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 298
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 313 -----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 367
Query: 299 -----RVLGP 303
R LGP
Sbjct: 368 EIRFPRTLGP 377
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 63/290 (21%)
Query: 81 HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN------- 129
H+V E P ++ +L +G+G+FG+V + ++ ++L A+K+++
Sbjct: 12 HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 130 --KYREAAMIEIDVLQRLARHDIGGTRYRSFPI-------DLVRELGRQLL---ESVAF- 176
K ++E++ + H T + + I DL L ++++ E V F
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 177 ----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
+H L +I+ DLKPENILL ++K+ D+ LS+ S D
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKESID------------ 178
Query: 227 IKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
H+ +Y T Y APEV+ G D WS G ++ E+ +G F
Sbjct: 179 ------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARLD-WPDGA 332
Q + E + M+ + +P + A F+R RL PDG
Sbjct: 227 QGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 276
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 65/250 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
+ L +G+GTFG+V+ + A+KI++ I E A + E VLQ +RH
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 70
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-EL 180
GG +R R F D R G +++ ++ ++H E
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
+++ DLK EN++L ++K+ D+ KDG+ K
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF------------------- 171
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 298
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 172 -----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 226
Query: 299 -----RVLGP 303
R LGP
Sbjct: 227 EIRFPRTLGP 236
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 57/220 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A K+V +S+ +E EI + + L + G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 153 --------------TRYRSFPIDL-----------VRELGRQLLESVAFMHELRLIHTDL 187
R RS ++L R RQ ++ V ++H R+IH DL
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
K N+ L VK+ D+ ++ DG K+L
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL------------------------CG 204
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
T +Y APEV+ G ++ D+WS+GCIL L G+ F+T
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 65/250 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
+ L +G+GTFG+V+ + A+KI++ I E A + E VLQ +RH
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 68
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-EL 180
GG +R R F D R G +++ ++ ++H E
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
+++ DLK EN++L ++K+ D+ KDG+ K
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF------------------- 169
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 298
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 170 -----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 224
Query: 299 -----RVLGP 303
R LGP
Sbjct: 225 EIRFPRTLGP 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 65/250 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
+ L +G+GTFG+V+ + A+KI++ I E A + E VLQ +RH
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 69
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-EL 180
GG +R R F D R G +++ ++ ++H E
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
+++ DLK EN++L ++K+ D+ KDG+ K
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF------------------- 170
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 298
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME
Sbjct: 171 -----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 225
Query: 299 -----RVLGP 303
R LGP
Sbjct: 226 EIRFPRTLGP 235
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
R ++ R RQ++ ++H R+IH DLK
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+ L VK+ D+ ++ DG K L T
Sbjct: 169 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL------------------------CGT 204
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
+Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 61/249 (24%)
Query: 81 HYVFAIGENLTPRYRILSK---MGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAM 136
H + + + +SK +G G FGQV +C + +A KI+++ K +E
Sbjct: 75 HRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK 134
Query: 137 IEIDVLQRL-------------ARHDI--------GGT--------RYRSFPIDLVRELG 167
EI V+ +L +++DI GG Y +D + +
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM- 193
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKFLSRSSKDGSYFKNLPKSS 225
+Q+ E + MH++ ++H DLKPENIL V+ A+ +K+ D+ L+R K K
Sbjct: 194 KQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFG-LARRYKPREKLK------ 246
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
++FG T + APEV+ ++P D+WSVG I L SG + F
Sbjct: 247 ----VNFG--------------TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
Query: 286 QTHENLEHL 294
+ E L
Sbjct: 289 LGDNDAETL 297
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 63/290 (21%)
Query: 81 HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN------- 129
H+V E P ++ +L +G+G+FG+V + ++ ++L A+K+++
Sbjct: 12 HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 130 --KYREAAMIEIDVLQRLARHDIGGTRYRSFPI-------DLVRELGRQLL---ESVAF- 176
K ++E++ + H T + + I DL L ++++ E V F
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 177 ----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
+H L +I+ DLKPENILL ++K+ D+ LS+ S D
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKESID------------ 178
Query: 227 IKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
H+ +Y T Y APEV+ G D WS G ++ E+ +G F
Sbjct: 179 ------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARLD-WPDGA 332
Q + E + M+ + +P + A F+R RL PDG
Sbjct: 227 QGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 276
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
R ++ R RQ++ ++H R+IH DLK
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+ L VK+ D+ ++ DG K L T
Sbjct: 167 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL------------------------CGT 202
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
+Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 241
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 154
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 155 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 210
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 211 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 340 AVW 342
W
Sbjct: 271 HPW 273
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 57/220 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A K+V +S+ +E EI + + L + G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 153 --------------TRYRSFPIDL-----------VRELGRQLLESVAFMHELRLIHTDL 187
R RS ++L R RQ ++ V ++H R+IH DL
Sbjct: 94 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 152
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
K N+ L VK+ D+ ++ DG K+L
Sbjct: 153 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL------------------------CG 188
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
T +Y APEV+ G ++ D+WS+GCIL L G+ F+T
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 228
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 154
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 155 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 210
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 211 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 340 AVW 342
W
Sbjct: 271 HPW 273
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 63/290 (21%)
Query: 81 HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN------- 129
H+V E P ++ +L +G+G+FG+V + ++ ++L A+K+++
Sbjct: 13 HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 72
Query: 130 --KYREAAMIEIDVLQRLARHDIGGTRYRSFPI-------DLVRELGRQLL---ESVAF- 176
K ++E++ + H T + + I DL L ++++ E V F
Sbjct: 73 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 132
Query: 177 ----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
+H L +I+ DLKPENILL ++K+ D+ LS+ S D
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKESID------------ 179
Query: 227 IKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
H+ +Y T Y APEV+ G D WS G ++ E+ +G F
Sbjct: 180 ------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARLD-WPDGA 332
Q + E + M+ + +P + A F+R RL PDG
Sbjct: 228 QGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 277
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 57/220 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A K+V +S+ +E EI + + L + G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 153 --------------TRYRSFPIDL-----------VRELGRQLLESVAFMHELRLIHTDL 187
R RS ++L R RQ ++ V ++H R+IH DL
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
K N+ L VK+ D+ ++ DG K L
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL------------------------CG 204
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
T +Y APEV+ G ++ D+WS+GCIL L G+ F+T
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A KIV +S+ RE +EI + + LA + G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
R ++ R RQ++ ++H R+IH DLK
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+ L VK+ D+ ++ DG K L T
Sbjct: 143 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL------------------------CGT 178
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
+Y APEV+ G ++ D+WS+GCI+ L G+ F+T
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 57/220 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
+G+G F + E D + KE+ A K+V +S+ +E EI + + L + G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 153 --------------TRYRSFPIDL-----------VRELGRQLLESVAFMHELRLIHTDL 187
R RS ++L R RQ ++ V ++H R+IH DL
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
K N+ L VK+ D+ ++ DG K L
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL------------------------CG 204
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
T +Y APEV+ G ++ D+WS+GCIL L G+ F+T
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 90/235 (38%), Gaps = 77/235 (32%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R + R LLE+V+F+H ++H DLKPENILL +++ D+ F S + G + L
Sbjct: 202 TRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF-SCHLEPGEKLREL- 259
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI------LGLGWNYPCDLWSVGCILV 276
T Y APE++ G+ DLW+ G IL
Sbjct: 260 -----------------------CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296
Query: 277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 336
L +G F + +++R + F + +W D +++
Sbjct: 297 TLLAGSPPFWHRRQI----------------LMLRMIMEGQYQF---SSPEWDDRSST-- 335
Query: 337 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
+ DL+ LL+ DP RL A +AL+HPFF R
Sbjct: 336 -------------------------VKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 131/358 (36%), Gaps = 119/358 (33%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
H EN P+ +G G V C + A+KI+ +
Sbjct: 9 SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARH-------DIGGTRYRSFPI-DLV------------------ 163
+ REA + E+D+L++++ H D T F + DL+
Sbjct: 65 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 164 --RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
R++ R LLE + +H+L ++H DLKPENILL +K+ D+ F +
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ----------- 173
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLWSVGCIL 275
+D G E V T Y APE+I + N+P D+WS G I+
Sbjct: 174 --------LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Query: 276 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 335
L +G F + + L M+ ++ G+ +W D +
Sbjct: 220 YTLLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWDDYS--- 257
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
D+++ DL+ L P +R A EAL HPFF + V
Sbjct: 258 DTVK------------------------DLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E +Q+L V ++H L++ H DLKPENI+L+ +N+PK
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK+IDFG H+ + + T + APE++ D+WS+G I L
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG + F E LA + V A+ + RR D T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
W
Sbjct: 272 HPW 274
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 58/223 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLAR----- 147
+ I+ ++G+G FG+V + + E L A K++ + ++ E ++EI++L
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 148 ------HD---------IGGTRYRSFPIDLVRELG--------RQLLESVAFMHELRLIH 184
HD G + ++L R L RQ+LE++ F+H R+IH
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DLK N+L+ +++ D+ G KNL T + +D
Sbjct: 141 RDLKAGNVLMTLEGDIRLADF---------GVSAKNL-------------KTLQKRDS-- 176
Query: 245 VVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 282
+ T ++ APEV++ ++Y D+WS+G L+E+ E
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 81/232 (34%), Gaps = 73/232 (31%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
D E RQ+ + + MHE +H DLKPENI+ +
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK----------------------- 291
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+S+ +KLIDFG T S V+ T + APEV G Y D+WSVG + L
Sbjct: 292 --RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 349
Query: 279 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 338
SG + F + E L R DW
Sbjct: 350 LSGLSPFGGENDDETL--------------------------RNVKSCDW---------- 373
Query: 339 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
N+ + D D ++ LL DP R+ +AL HP+ T
Sbjct: 374 ----------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 58/223 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLAR----- 147
+ I+ ++G+G FG+V + + E L A K++ + ++ E ++EI++L
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 148 ------HD---------IGGTRYRSFPIDLVRELG--------RQLLESVAFMHELRLIH 184
HD G + ++L R L RQ+LE++ F+H R+IH
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DLK N+L+ +++ D+ G KNL T + +D
Sbjct: 133 RDLKAGNVLMTLEGDIRLADF---------GVSAKNL-------------KTLQKRDS-- 168
Query: 245 VVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 282
+ T ++ APEV++ ++Y D+WS+G L+E+ E
Sbjct: 169 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 81/232 (34%), Gaps = 73/232 (31%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
D E RQ+ + + MHE +H DLKPENI+ +
Sbjct: 149 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK----------------------- 185
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+S+ +KLIDFG T S V+ T + APEV G Y D+WSVG + L
Sbjct: 186 --RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 243
Query: 279 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 338
SG + F + E L R DW
Sbjct: 244 LSGLSPFGGENDDETL--------------------------RNVKSCDW---------- 267
Query: 339 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
N+ + D D ++ LL DP R+ +AL HP+ T
Sbjct: 268 ----------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 309
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y+KV D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y+KV D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y+KV D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y+KV D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 52/214 (24%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDI---- 150
L ++G+G+FG+V + DN +++VAIKI+ E EI VL + +
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 151 -----------------GGTRY---RSFPID--LVRELGRQLLESVAFMHELRLIHTDLK 188
GG+ R+ P D + + +++L+ + ++H + IH D+K
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+LL VK+ D+ G T + V T
Sbjct: 148 AANVLLSEQGDVKLADFGVA------------------------GQLTDTQIKRNTFVGT 183
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
+ APEVI ++ D+WS+G +EL GE
Sbjct: 184 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 128/357 (35%), Gaps = 105/357 (29%)
Query: 69 GSPPWRPDDKDGHYVFAIGENLT-----PRYRI--LSKMGEGTFGQVVECFDNEKKELVA 121
GS P R + H F L PR + K+GEG+ G V +LVA
Sbjct: 1 GSSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 60
Query: 122 IKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPI--------------------- 160
+K + + R + V+ R +H+ Y S+ +
Sbjct: 61 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 120
Query: 161 ------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
+ + + +L++++ +H +IH D+K ++ILL VK+ D+ F ++ SK+
Sbjct: 121 HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 180
Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
K L V T ++ APE+I L + D+WS+G +
Sbjct: 181 VPRRKXL------------------------VGTPYWMAPELISRLPYGPEVDIWSLGIM 216
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
++E+ GE + L+ + M+ L P
Sbjct: 217 VIEMVDGEPPYFNEPPLKAMKMIRDNLPP------------------------------- 245
Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
RL NL + L L LL DPA+R A E L+HPF +
Sbjct: 246 -----------RLKNL-----HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 286
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 129/348 (37%), Gaps = 119/348 (34%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSINKYREAAMI 137
EN P+ +G G V C + A+KI+ + + REA +
Sbjct: 4 ENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 138 EIDVLQRLARH-------DIGGTRYRSFPI-DLV--------------------RELGRQ 169
E+D+L++++ H D T F + DL+ R++ R
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
LLE + +H+L ++H DLKPENILL +K+ D+ F +
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ------------------- 160
Query: 230 IDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLWSVGCILVELCSGEA 283
+D G E V T Y APE+I + N+P D+WS G I+ L +G
Sbjct: 161 LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 214
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 343
F + + L M+ ++ G+ +W D + D+++
Sbjct: 215 PFWHRKQMLMLRMI------------------MSGNYQFGSP-EWDDYS---DTVK---- 248
Query: 344 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
DL+ L P +R A EAL HPFF +
Sbjct: 249 --------------------DLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 33 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 92
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 93 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 152
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 153 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 188
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 189 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 248
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 249 I---------------------RMGQYEFPNPEWSEVS---------------------- 265
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 266 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 302
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 131/358 (36%), Gaps = 119/358 (33%)
Query: 80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
H EN P+ +G G V C + A+KI+ +
Sbjct: 9 SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARH-------DIGGTRYRSFPI-DLV------------------ 163
+ REA + E+D+L++++ H D T F + DL+
Sbjct: 65 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 164 --RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
R++ R LLE + +H+L ++H DLKPENILL +K+ D+ F +
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ----------- 173
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLWSVGCIL 275
+D G + V T Y APE+I + N+P D+WS G I+
Sbjct: 174 --------LDPG------EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Query: 276 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 335
L +G F + + L M+ ++ G+ +W D +
Sbjct: 220 YTLLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWDDYS--- 257
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
D+++ DL+ L P +R A EAL HPFF + V
Sbjct: 258 DTVK------------------------DLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 213
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G+T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 214 ----------GATW-------TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 25 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 84
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 85 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 144
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 145 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 180
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 181 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 240
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 241 I---------------------RMGQYEFPNPEWSEVS---------------------- 257
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 258 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 294
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 24 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 83
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 84 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 143
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 144 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 179
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 180 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 239
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 240 I---------------------RMGQYEFPNPEWSEVS---------------------- 256
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 257 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 293
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y+KV D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y+KV D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 23 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 82
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 83 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 142
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 143 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 178
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 238
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 239 I---------------------RMGQYEFPNPEWSEVS---------------------- 255
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 256 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 292
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y+KV D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARH- 148
Y+I+ +GEG+FG+V + + VA+KI+ + + K IE ++ RL RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 149 -------------------DIGGTRYRSFPIDL-------VRELGRQLLESVAFMHELRL 182
+ G + + R +Q++ +V + H ++
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKPEN+LL VK+ D+ LS DG++ K
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT---------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 279
+ +Y APEVI G + P D+WS G IL V LC
Sbjct: 166 --SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 202
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y+KV D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 76
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 77 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 137 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 172
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 173 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 233 I---------------------RMGQYEFPNPEWSEVS---------------------- 249
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y+KV D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
+ L +G+GTFG+V+ + A+KI+R I E A + E VLQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
HD GG +R R F + R G +++ ++ ++H +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
P
Sbjct: 223 RFP 225
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y+KV D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARH- 148
Y+I+ +GEG+FG+V + + VA+KI+ + + K IE ++ RL RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 149 -------------------DIGGTRYRSFPIDL-------VRELGRQLLESVAFMHELRL 182
+ G + + R +Q++ +V + H ++
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKPEN+LL VK+ D+ LS DG++ K
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT---------------------- 170
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 279
+ +Y APEVI G + P D+WS G IL V LC
Sbjct: 171 --SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 207
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 18 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 77
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 78 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 137
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 138 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 173
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 174 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 233
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 234 I---------------------RMGQYEFPNPEWSEVS---------------------- 250
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 251 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 287
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
+ L +G+GTFG+V+ + A+KI+R I E A + E VLQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
HD GG +R R F + R G +++ ++ ++H +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
P
Sbjct: 223 RFP 225
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARH- 148
Y+I+ +GEG+FG+V + + VA+KI+ + + K IE ++ RL RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 149 -------------------DIGGTRYRSFPIDL-------VRELGRQLLESVAFMHELRL 182
+ G + + R +Q++ +V + H ++
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DLKPEN+LL VK+ D+ LS DG++ K
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT---------------------- 171
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 279
+ +Y APEVI G + P D+WS G IL V LC
Sbjct: 172 --SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 208
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
+ L +G+GTFG+V+ + A+KI+R I E A + E VLQ
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
HD GG +R R F + R G +++ ++ ++H +
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 129
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--------------------- 168
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME +
Sbjct: 169 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 225
Query: 301 LGP 303
P
Sbjct: 226 RFP 228
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 57/218 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARH-- 148
Y+I+ +GEG+FG+V + + VA+KI+ + + K IE ++ RL RH
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 149 ------------------DIGGTRYRSFPIDL-------VRELGRQLLESVAFMHELRLI 183
+ G + + R +Q++ +V + H +++
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 125
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H DLKPEN+LL VK+ D+ LS DG++ K
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT----------------------- 161
Query: 244 YVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 279
+ +Y APEVI G + P D+WS G IL V LC
Sbjct: 162 -SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 198
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ Y S+
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
+ + + + +L++++ +H +IH D+K ++
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 277
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
ILL VK+ D+ F ++ SK+ K L V T ++
Sbjct: 278 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 313
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 365
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
RL NL + L L LL
Sbjct: 366 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 386
Query: 372 YDPAERLKAREALRHPFFTR 391
DPA+R A E L+HPF +
Sbjct: 387 RDPAQRATAAELLKHPFLAK 406
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 52/214 (24%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQR---------- 144
L K+G+G+FG+V + DN +++VAIKI+ E EI VL +
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 145 ----------LARHDIGGTRYRSF----PID--LVRELGRQLLESVAFMHELRLIHTDLK 188
+ +GG P+D + + R++L+ + ++H + IH D+K
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+LL VK+ D+ G T + V T
Sbjct: 147 AANVLLSEHGEVKLADFGVA------------------------GQLTDTQIKRNXFVGT 182
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
+ APEVI ++ D+WS+G +EL GE
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 122
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 183 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 218
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 278
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 279 I---------------------RMGQYEFPNPEWSEVS---------------------- 295
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 78
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 139 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 174
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 235 I---------------------RMGQYEFPNPEWSEVS---------------------- 251
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 76
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 77 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 137 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 172
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 173 SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 233 I---------------------RMGQYEFPNPEWSEVS---------------------- 249
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
+ L +G+GTFG+V+ + A+KI+R I E A + E VLQ
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
HD GG +R R F + R G +++ ++ ++H +
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 131
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------------------- 170
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME +
Sbjct: 171 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 227
Query: 301 LGP 303
P
Sbjct: 228 RFP 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ Y S+
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
+ + + + +L++++ +H +IH D+K ++
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 200
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
ILL VK+ D+ F ++ SK+ K L V T ++
Sbjct: 201 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 236
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 288
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
RL NL + L L LL
Sbjct: 289 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 309
Query: 372 YDPAERLKAREALRHPFFTR 391
DPA+R A E L+HPF +
Sbjct: 310 RDPAQRATAAELLKHPFLAK 329
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 27/130 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 283 ALFQTHENLE 292
F E ++
Sbjct: 236 PPFFADEPIQ 245
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 52/225 (23%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL-----QRLARHDIG 151
++ +G+G FGQVV+ + AIK +R + + E+ +L Q + R+
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 152 GTRYRSF--PIDLVRE----------------------------------LGRQLLESVA 175
R+F P+ V++ L RQ+LE+++
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
++H +IH DLKP NI + + VK+ D+ KN+ +S I +D +
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKLDSQNL 180
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
+ + + T Y A EV+ G G +N D++S+G I E+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 78
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 139 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 174
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 235 I---------------------RMGQYEFPNPEWSEVS---------------------- 251
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 69 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 128
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 129 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 189 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 224
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
+ T +Y APEV+ ++ CD+WS+G I+ + LC + H M R
Sbjct: 225 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 284
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
+ R + ++P+ S S
Sbjct: 285 I---------------------RMGQYEFPNPEWSEVS---------------------- 301
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
++ L++ LL+ +P +R+ E + HP+ + + P
Sbjct: 302 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 338
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 52/225 (23%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL-----QRLARHDIG 151
++ +G+G FGQVV+ + AIK +R + + E+ +L Q + R+
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 152 GTRYRSF--PIDLVRE----------------------------------LGRQLLESVA 175
R+F P+ V++ L RQ+LE+++
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
++H +IH DLKP NI + + VK+ D+ KN+ +S I +D +
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKLDSQNL 180
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
+ + + T Y A EV+ G G +N D++S+G I E+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
+ L +G+GTFG+V+ + A+KI+R I E A + E VLQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
HD GG +R R F + R G +++ ++ ++H +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
P
Sbjct: 223 RFP 225
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
+ L +G+GTFG+V+ + A+KI+R I E A + E VLQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
HD GG +R R F + R G +++ ++ ++H +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
P
Sbjct: 223 RFP 225
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 213
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 214 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
+ L +G+GTFG+V+ + A+KI+R I E A + E VLQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
HD GG +R R F + R G +++ ++ ++H +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
++ D+K EN++L ++K+ D+ DG+ K
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
T Y APEV+ + D W +G ++ E+ G F Q HE L L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
P
Sbjct: 223 RFP 225
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 138 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 187
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 188 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 213
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 214 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 69/272 (25%)
Query: 93 RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD 149
+Y L K+GEG+FG+ + D + + I I R +K RE + E+ VL + +
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 150 I---------------------GGTRYRS--------FPIDLVRELGRQLLESVAFMHEL 180
I GG ++ F D + + Q+ ++ +H+
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-----ST 235
+++H D+K +NI L +KDG+ ++L DFG ++
Sbjct: 145 KILHRDIKSQNIFL-----------------TKDGT----------VQLGDFGIARVLNS 177
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ--THENLEH 293
T E + T +Y +PE+ +N D+W++GC+L ELC+ + F+ + +NL
Sbjct: 178 TVELARA--CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV- 234
Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGAR 325
L ++ P+ H + F+R R
Sbjct: 235 LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPR 266
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ Y S+
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
+ + + + +L++++ +H +IH D+K ++
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 155
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
ILL VK+ D+ F ++ SK+ K L V T ++
Sbjct: 156 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 191
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 192 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 243
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
RL NL + L L LL
Sbjct: 244 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 264
Query: 372 YDPAERLKAREALRHPFFTR 391
DPA+R A E L+HPF +
Sbjct: 265 RDPAQRATAAELLKHPFLAK 284
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 130 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK---------- 179
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 180 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 52/214 (24%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQR---------- 144
L K+G+G+FG+V + DN +++VAIKI+ E EI VL +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 145 ----------LARHDIGGTRYRSF----PID--LVRELGRQLLESVAFMHELRLIHTDLK 188
+ +GG P+D + + R++L+ + ++H + IH D+K
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+LL VK+ D+ G T + V T
Sbjct: 132 AANVLLSEHGEVKLADFGVA------------------------GQLTDTQIKRNXFVGT 167
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
+ APEVI ++ D+WS+G +EL GE
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 185
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 186 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 185
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 186 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 52/214 (24%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQR---------- 144
L K+G+G+FG+V + DN +++VAIKI+ E EI VL +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 145 ----------LARHDIGGTRYRSF----PID--LVRELGRQLLESVAFMHELRLIHTDLK 188
+ +GG P+D + + R++L+ + ++H + IH D+K
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+LL VK+ D+ G T + V T
Sbjct: 132 AANVLLSEHGEVKLADFGVA------------------------GQLTDTQIKRNTFVGT 167
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
+ APEVI ++ D+WS+G +EL GE
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 129 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 178
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 179 ----------GRTW-------TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ Y S+
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
+ + + + +L++++ +H +IH D+K ++
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 146
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
ILL VK+ D+ F ++ SK+ K L V T ++
Sbjct: 147 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 182
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 234
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
RL NL + L L LL
Sbjct: 235 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 255
Query: 372 YDPAERLKAREALRHPFFTR 391
DPA+R A E L+HPF +
Sbjct: 256 RDPAQRATAAELLKHPFLAK 275
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 52/214 (24%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQR---------- 144
L K+G+G+FG+V + DN +++VAIKI+ E EI VL +
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 145 ----------LARHDIGGTRYRSF----PID--LVRELGRQLLESVAFMHELRLIHTDLK 188
+ +GG P+D + + R++L+ + ++H + IH D+K
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
N+LL VK+ D+ G T + V T
Sbjct: 152 AANVLLSEHGEVKLADFGVA------------------------GQLTDTQIKRNTFVGT 187
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
+ APEVI ++ D+WS+G +EL GE
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
K+GEG+ G V +LVA+K + + R + V+ R +H+ Y S+
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
+ + + + +L++++ +H +IH D+K ++
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 150
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
ILL VK+ D+ F ++ SK+ K L V T ++
Sbjct: 151 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 186
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 187 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 238
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
RL NL + L L LL
Sbjct: 239 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 259
Query: 372 YDPAERLKAREALRHPFFTR 391
DPA+R A E L+HPF +
Sbjct: 260 RDPAQRATAAELLKHPFLAK 279
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 54/234 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
K+GEG+ G V + + VA+K + + R + V+ R HD Y S+
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
+ + + + +L +++++H +IH D+K ++
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS 171
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
ILL S +K+ D+ F ++ SK+ +PK + V T ++
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKE------VPKRKXL------------------VGTPYW 207
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP 305
APEVI L + D+WS+G +++E+ GE + N L M R+ LP
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPPLQAMRRIRDSLP 258
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ ++ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ E+V F+H L+H DLKP NI + VKV D+ ++ +D L A
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA-- 183
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ H+ V T+ Y +PE I G +++ D++S+G IL EL
Sbjct: 184 ----------YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 120/338 (35%), Gaps = 115/338 (34%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY------------REAAMIEI-- 139
Y + +G+G F V C + E + A+KIV + K+ REA++ +
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 140 --DVLQRLARHDIGGTRYRSFPI----DLVREL------------------GRQLLESVA 175
+++ L + G Y F DL E+ RQ+LE++
Sbjct: 87 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
+ H+ +IH D+KP +LL S E S+ +KL FG
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKLGGFG-V 181
Query: 236 TFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
+ + V V T H+ APEV+ + P D+W G IL L S
Sbjct: 182 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----------- 230
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
G LP + G R + ++
Sbjct: 231 ----------GCLPFY-----------------------GTKERLFEGIIKGKYKMNPRQ 257
Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
H+ SA DL+ + +L DPAER+ EAL HP+
Sbjct: 258 WSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 292
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 78/197 (39%), Gaps = 26/197 (13%)
Query: 157 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
S D + +Q+L+ V ++H R+ H DLKPENI+L+
Sbjct: 104 SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD-------------------- 143
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
KN+P + IKLIDFG + + + T + APE++ D+WS+G I
Sbjct: 144 --KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 200
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
L SG + F E L + V A+ + RR D T
Sbjct: 201 TYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTI 260
Query: 335 RDSMRAVW-KLLRLPNL 350
S+ W K +R N+
Sbjct: 261 AQSLEHSWIKAIRRRNV 277
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 125/356 (35%), Gaps = 111/356 (31%)
Query: 69 GSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--R 126
S W+ +D +F E L G G F +VV + +L A+K + +
Sbjct: 9 SSSSWKKQAEDIKKIFEFKETL----------GTGAFSEVVLAEEKATGKLFAVKCIPKK 58
Query: 127 SINKYREAAMIEIDVLQRLARHDI---------------------GGTRY-----RSFPI 160
++ + EI VL+++ +I GG + + F
Sbjct: 59 ALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYT 118
Query: 161 DL-VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
+ L RQ+L++V ++H + ++H DLKPEN+L S +
Sbjct: 119 EKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD--------------------- 157
Query: 220 NLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
+ S I + DFG + E + S T Y APEV+ ++ D WS+G I
Sbjct: 158 ---EESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 214
Query: 278 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 337
L G F + + + E++L +AE F D D A
Sbjct: 215 LLCGYPPFYDENDSK---LFEQIL-------------KAEYEFDSPYWDDISDSAK---- 254
Query: 338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
D ++ L+ DP +R +A RHP+ D
Sbjct: 255 --------------------------DFIRNLMEKDPNKRYTCEQAARHPWIAGDT 284
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 119/336 (35%), Gaps = 103/336 (30%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
++T Y++ ++G+G F V C + A KI+ + R+ +E + + RL
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RH--------DIGGTRYRSFPIDLV-----------RE---------LGRQLLESVAFMH 178
+H I + DLV RE +Q+LESV H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
++H DLKPEN+LL S K +A+KL DFG
Sbjct: 121 LNGIVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEV 156
Query: 239 HQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
D T Y +PEV+ + P D+W+ G IL L G F +
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ----- 211
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
R + + GA D+P W
Sbjct: 212 ------------------HRLYQQIKAGA-YDFPSPE---------W------------- 230
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
D + DL+ +L +PA+R+ A EAL+HP+ +
Sbjct: 231 DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 120/338 (35%), Gaps = 115/338 (34%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY------------REAAMIEI-- 139
Y + +G+G F V C + E + A+KIV + K+ REA++ +
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 140 --DVLQRLARHDIGGTRYRSFPI----DLVREL------------------GRQLLESVA 175
+++ L + G Y F DL E+ RQ+LE++
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
+ H+ +IH D+KP +LL S E S+ +KL FG
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKLGGFG-V 179
Query: 236 TFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
+ + V V T H+ APEV+ + P D+W G IL L S
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----------- 228
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
G LP + G R + ++
Sbjct: 229 ----------GCLPFY-----------------------GTKERLFEGIIKGKYKMNPRQ 255
Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
H+ SA DL+ + +L DPAER+ EAL HP+
Sbjct: 256 WSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 290
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 119/336 (35%), Gaps = 103/336 (30%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
++T Y++ ++G+G F V C + A KI+ + R+ +E + + RL
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RH--------DIGGTRYRSFPIDLV-----------RE---------LGRQLLESVAFMH 178
+H I + DLV RE +Q+LESV H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
++H DLKPEN+LL S K +A+KL DFG
Sbjct: 121 LNGIVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEV 156
Query: 239 HQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
D T Y +PEV+ + P D+W+ G IL L G F +
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ----- 211
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
R + + GA D+P W
Sbjct: 212 ------------------HRLYQQIKAGA-YDFPSPE---------W------------- 230
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
D + DL+ +L +PA+R+ A EAL+HP+ +
Sbjct: 231 DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+I+ G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 106/290 (36%), Gaps = 71/290 (24%)
Query: 69 GSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI 128
G +R +D + HY +GE L G G F V +C + A K ++
Sbjct: 1 GMSTFRQEDVEDHY--EMGEEL----------GSGQFAIVRKCRQKGTGKEYAAKFIKKR 48
Query: 129 -------NKYREAAMIEIDVLQRL------ARHDI---------------GGTRY----- 155
RE E+++L+ + HDI GG +
Sbjct: 49 RLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE 108
Query: 156 -RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
S D + +Q+L+ V ++H R+ H DLKPENI+L+
Sbjct: 109 KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD------------------ 150
Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVG 272
KN+P + IKLIDFG + + + T + APE++ D+WS+G
Sbjct: 151 ----KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205
Query: 273 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
I L SG + F E L + V A+ + RR
Sbjct: 206 VITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 25/168 (14%)
Query: 157 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
S D + +Q+L+ V ++H R+ H DLKPENI+L+
Sbjct: 125 SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD-------------------- 164
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
KN+P + IKLIDFG + + + T + APE++ D+WS+G I
Sbjct: 165 --KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 221
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
L SG + F E L + V A+ + RR
Sbjct: 222 TYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 86/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S +
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTE 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 30/133 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
R+ L+++ F+H ++IH D+K +NILL DGS +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 155
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
KL DFG T E S +V T ++ APEV+ + D+WS+G + +E+ GE
Sbjct: 156 KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 285 FQTHENLEHLAMM 297
+ L L ++
Sbjct: 216 YLNENPLRALYLI 228
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 30/133 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
R+ L+++ F+H ++IH D+K +NILL DGS +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 155
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
KL DFG T E S +V T ++ APEV+ + D+WS+G + +E+ GE
Sbjct: 156 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 285 FQTHENLEHLAMM 297
+ L L ++
Sbjct: 216 YLNENPLRALYLI 228
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
R+ L+++ F+H ++IH D+K +NILL DGS +
Sbjct: 124 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 156
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
KL DFG T E S +V T ++ APEV+ + D+WS+G + +E+ GE
Sbjct: 157 KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y+KV D+ R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
+Q+L+ V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
FG T + APE++ D+WS+G I L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
F E LA + V + A+ + R+ + T ++++R W
Sbjct: 217 PFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y AP +IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
+Q+L+ V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
FG T + APE++ D+WS+G I L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
F E LA + V + A+ + R+ + T ++++R W
Sbjct: 217 PFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 84/230 (36%), Gaps = 78/230 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSA---------------------------GELK 174
Query: 229 LIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
+ DFG S + + T Y PE+I G + DLWS+G + E G+ F+
Sbjct: 175 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
+ E + RV P + GAR
Sbjct: 235 NTYQETYKRISRVEFTFP------------DFVTEGAR---------------------- 260
Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 261 ----------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
R+ L+++ F+H ++IH D+K +NILL DGS +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 155
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
KL DFG T E S +V T ++ APEV+ + D+WS+G + +E+ GE
Sbjct: 156 KLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE I G + DLWS+G + E G+ F+ +
Sbjct: 171 L----------------CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPXLREVLEHPWITANSSKPS 273
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 171 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ E+V F+H L+H DLKP NI + VKV D+ ++ +D L A
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA-- 229
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ H V T+ Y +PE I G +++ D++S+G IL EL
Sbjct: 230 ----------YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
+Q+L+ V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
FG T + APE++ D+WS+G I L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
F E LA + V A+ + R+ + T ++++R W
Sbjct: 217 PFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 171 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 133 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 182
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 183 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 227 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 251
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 252 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 285
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHA----------PSSRRTT 166
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 167 L----------------SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 211 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 235
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 236 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTD 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 171 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 71/232 (30%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+ ++ +G GT+GQV + + +L AIK++ E EI++L++ + H T
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 154 RYRSF-----------------------PIDLVRE-------------LGRQLLESVAFM 177
Y +F DL++ + R++L ++ +
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
H+ ++IH D+K +N+LL +++ +KL+DFG +
Sbjct: 146 HQHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQ 178
Query: 238 EHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG 281
+ + + T ++ APEVI +++ DLWS+G +E+ G
Sbjct: 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 98/320 (30%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
K+GEG+ G V + VA+K++ + R + V+ R +H Y+S+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 159 PI-----------------DLVREL----------GRQLLESVAFMHELRLIHTDLKPEN 191
+ D+V ++ +L+++A++H +IH D+K ++
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS 171
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
ILL VK+ D+ F ++ SKD +PK + V T ++
Sbjct: 172 ILLTLDGRVKLSDFGFCAQISKD------VPKRKXL------------------VGTPYW 207
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
APEVI + D+WS+G +++E+ GE
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEP---------------------------- 239
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
YF S ++A+ +L P +++ + L D L+ +L
Sbjct: 240 ------PYF-------------SDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLV 280
Query: 372 YDPAERLKAREALRHPFFTR 391
DP ER A+E L HPF +
Sbjct: 281 RDPQERATAQELLDHPFLLQ 300
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 123/330 (37%), Gaps = 101/330 (30%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-IEIDVLQRLAR 147
N+ + + +G G F +V +L A+K ++ +R++++ EI VL+++
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 148 HDI-------GGTRYRSFPIDLV-------RELGR-------------QLLESVAFMHEL 180
+I T + + LV R L R Q+L +V ++HE
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
++H DLKPEN+L ++ E ++S I + DFG + E
Sbjct: 126 GIVHRDLKPENLLYLTPE------------------------ENSKIMITDFGLSKMEQN 161
Query: 241 D-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMME 298
S T Y APEV+ ++ D WS+G I + LC ++ E+ + E
Sbjct: 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES----KLFE 217
Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
++ E Y+ + W D + S
Sbjct: 218 KI---------------KEGYYEFESPF-WDD------------------------ISES 237
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPF 388
A D I LL DP ER +AL HP+
Sbjct: 238 AKDFI---CHLLEKDPNERYTCEKALSHPW 264
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 87/231 (37%), Gaps = 57/231 (24%)
Query: 84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV- 141
A T Y++ ++G+G F V C + A KI+ + R+ +E +
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 142 LQRLARH--------DIGGTRYRSFPIDLV-----------RE---------LGRQLLES 173
+ RL +H I + DLV RE Q+LES
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILES 142
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
V +H+ ++H DLKPEN+LL S K +A+KL DFG
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASK------------------------CKGAAVKLADFG 178
Query: 234 ---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
E Q T Y +PEV+ + P D+W+ G IL L G
Sbjct: 179 LAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 169
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 170 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 214 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 238
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 239 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTD 166
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 167 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 211 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 235
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 236 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 54/232 (23%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---------------RSINK 130
IG+ + RY+I+ K+G G V D VAIK + R ++
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 131 YRE------AAMIEIDVLQR---LARHDIGGTRYRSF-------PIDLVRELGRQLLESV 174
+ +MI++D L I G + +D Q+L+ +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
H++R++H D+KP+NIL+ S + +K+ D+ S+
Sbjct: 125 KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE--------------------- 163
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
T+ +H V+ T Y +PE G + D++S+G +L E+ GE F
Sbjct: 164 TSLTQTNH--VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 73/226 (32%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+Q+LE+V H++ ++H DLKPEN+LL S K +A+
Sbjct: 128 QQILEAVLHCHQMGVVHRDLKPENLLLASK------------------------LKGAAV 163
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
KL DFG E Q T Y +PEV+ + P DLW+ G IL L G
Sbjct: 164 KLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
F + R + + GA D+P W
Sbjct: 224 FWDEDQ-----------------------HRLYQQIKAGA-YDFPSPE---------W-- 248
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
D + DL+ +L +P++R+ A EAL+HP+ +
Sbjct: 249 -----------DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAA 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
+Q+L+ V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
FG T + APE++ D+WS+G I L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
F E LA + V A+ + R+ + T ++++R W
Sbjct: 217 PFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTD 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 116/328 (35%), Gaps = 97/328 (29%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA------------MIEIDVLQRLAR 147
+G G G+V+ECF + A+K++ K R+ + +DV + +
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHH 77
Query: 148 HD----------IGGTRY--------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP 189
GG + ++F E+ R + ++ F+H + H D+KP
Sbjct: 78 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKP 137
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-VST 248
EN+L S E K + +KL DFG Q+ T
Sbjct: 138 ENLLYTSKE------------------------KDAVLKLTDFGFAKETTQNALQTPCYT 173
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM 308
+Y APEV+ ++ CD+WS+G I+ L G F ++ M+R +
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI------- 226
Query: 309 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG 368
R +Y PN V A LI L
Sbjct: 227 ------RLGQY--------------------------GFPNPEWSEVSEDAKQLIRL--- 251
Query: 369 LLRYDPAERLKAREALRHPFFTRDVRRP 396
LL+ DP ERL + + HP+ + + P
Sbjct: 252 LLKTDPTERLTITQFMNHPWINQSMVVP 279
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 116/328 (35%), Gaps = 97/328 (29%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA------------MIEIDVLQRLAR 147
+G G G+V+ECF + A+K++ K R+ + +DV + +
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHH 96
Query: 148 HD----------IGGTRY--------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP 189
GG + ++F E+ R + ++ F+H + H D+KP
Sbjct: 97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKP 156
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-VST 248
EN+L S E K + +KL DFG Q+ T
Sbjct: 157 ENLLYTSKE------------------------KDAVLKLTDFGFAKETTQNALQTPCYT 192
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM 308
+Y APEV+ ++ CD+WS+G I+ L G F ++ M+R +
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI------- 245
Query: 309 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG 368
R +Y PN V A LI L
Sbjct: 246 ------RLGQY--------------------------GFPNPEWSEVSEDAKQLIRL--- 270
Query: 369 LLRYDPAERLKAREALRHPFFTRDVRRP 396
LL+ DP ERL + + HP+ + + P
Sbjct: 271 LLKTDPTERLTITQFMNHPWINQSMVVP 298
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTX 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTD 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 57/231 (24%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K ++ K R + +D
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVD 122
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 123 VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINI 182
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
H D+KPEN+L S K P+ + +KL DFG T H
Sbjct: 183 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 218
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
+ T +Y APEV+ ++ CD WS+G I L G F ++ L
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL 269
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
+Q+L+ V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
FG T + APE++ D+WS+G I L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
F E LA + V + A+ + R+ + T ++++R W
Sbjct: 217 PFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXX 167
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 168 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 212 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 236
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 237 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 115 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 164
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 165 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 209 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 233
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 234 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
+Q+L+ V ++H ++ H DLKPENI+L+ ++K+ D+ L+ +DG FKN+
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
FG T + APE++ D+WS+G I L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
F E LA + V A+ + R+ + T ++++R W
Sbjct: 217 PFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXX 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 171 L----------------XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXX 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+L+ Y++V D+ F R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAA 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R Q++ + ++H L LI+ DLKPEN+++ Y++V D+ R
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
G T + T Y APE+IL G+N D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 56/231 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHD 149
+ L +G+G+FG+V+ ++ A+K++ ++I K +E M E +VL + +H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
GG R R F R ++ ++ ++H L
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
+++ DLKPENILL S ++ + D+ + I+ STT
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKEN------------------IEHNSTT----- 196
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
S T Y APEV+ ++ D W +G +L E+ G F + E
Sbjct: 197 -STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRDD 191
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 192 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 236 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 260
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 261 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ R++H DLK EN+LL + +K+ D+ F + + G
Sbjct: 118 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG------------ 165
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
KL F + Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 166 KLDTF-------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 213 G-QNLKELR--ERVL 224
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 123/340 (36%), Gaps = 112/340 (32%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH----- 148
Y + +G G++ + C A+K+ I+K + EI++L R +H
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 149 -----DIGGTRYRSFPIDLVREL--GRQLLE----------------------SVAFMHE 179
D G Y LV EL G +LL+ +V ++H
Sbjct: 86 LKDVYDDGKHVY------LVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
++H DLKP NIL Y +++ DFG
Sbjct: 140 QGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQLR 176
Query: 240 QDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
++ +++ T ++ APEV+ G++ CD+WS+G +L + +G F
Sbjct: 177 AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN--------- 227
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
GP +D E R G+ G W V
Sbjct: 228 -----GP--------SDTPEEILTRIGSGKFTLSGGN--------WNT----------VS 256
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
+A DL+ +L DP +RL A++ L+HP+ T+ + P
Sbjct: 257 ETAKDLV---SKMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 83/230 (36%), Gaps = 78/230 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSA---------------------------GELK 149
Query: 229 LIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
+ DFG S + T Y PE+I G + DLWS+G + E G+ F+
Sbjct: 150 IADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
+ E + RV P + GAR
Sbjct: 210 NTYQETYKRISRVEFTFP------------DFVTEGAR---------------------- 235
Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 236 ----------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+Q+LES+A+ H ++H +LKPEN+LL S K +A+
Sbjct: 135 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 170
Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
KL DFG + ++ T Y +PEV+ ++ P D+W+ G IL L G
Sbjct: 171 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 52/223 (23%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL-----QRLARHDIG 151
++ +G+G FGQVV+ + AIK +R + + E+ +L Q + R+
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 152 GTRYRSF--PIDLVRE----------------------------------LGRQLLESVA 175
R+F P V++ L RQ+LE+++
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
++H +IH +LKP NI + + VK+ D+ KN+ +S I +D +
Sbjct: 131 YIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA----------KNVHRSLDILKLDSQNL 180
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVE 277
+ + + T Y A EV+ G G +N D +S+G I E
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 86/228 (37%), Gaps = 57/228 (25%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
RY ++ +G G FG D + ELVA+K + K E EI + R RH
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPNIV 77
Query: 149 ------------------DIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
GG + F D R +QL+ V++ H +++ H
Sbjct: 78 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 137
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
DLK EN LL DGS + +K+ DFG ++ H
Sbjct: 138 RDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSSVLHSQP 172
Query: 243 SYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHE 289
V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 173 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 129/351 (36%), Gaps = 116/351 (33%)
Query: 86 IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
+ +L P + I+ ++G+ FG+V + + E L A K++ + ++ E M+EID+L
Sbjct: 4 VTRDLNPEDFWEIIGELGD--FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 143 QRLARHDI--------------------GGTRYRSFPIDLVRELG--------RQLLESV 174
+I G + ++L R L +Q L+++
Sbjct: 62 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 121
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
++H+ ++IH DLK NIL + DG IKL DFG
Sbjct: 122 NYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKLADFGV 154
Query: 234 ---STTFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALF 285
+T Q + T ++ APEV++ ++Y D+WS+G L+E+ E
Sbjct: 155 SAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP-- 212
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
PHH + + MR + K+
Sbjct: 213 -------------------PHHEL--------------------------NPMRVLLKIA 227
Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
+ + + + D L+ L + R + L+HPF T D +P
Sbjct: 228 KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 278
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 123/340 (36%), Gaps = 112/340 (32%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH----- 148
Y + +G G++ + C A+K+ I+K + EI++L R +H
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 149 -----DIGGTRYRSFPIDLVREL--GRQLLE----------------------SVAFMHE 179
D G Y LV EL G +LL+ +V ++H
Sbjct: 86 LKDVYDDGKHVY------LVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
++H DLKP NIL Y +++ DFG
Sbjct: 140 QGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQLR 176
Query: 240 QDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
++ +++ T ++ APEV+ G++ CD+WS+G +L + +G F
Sbjct: 177 AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN--------- 227
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
GP +D E R G+ G W V
Sbjct: 228 -----GP--------SDTPEEILTRIGSGKFTLSGGN--------WNT----------VS 256
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
+A DL+ +L DP +RL A++ L+HP+ T+ + P
Sbjct: 257 ETAKDLVS---KMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRDD 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
R+ L+++ F+H ++IH ++K +NILL DGS +
Sbjct: 124 RECLQALEFLHSNQVIHRNIKSDNILL-----------------GMDGS----------V 156
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
KL DFG T E S +V T ++ APEV+ + D+WS+G + +E+ GE
Sbjct: 157 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 85/228 (37%), Gaps = 57/228 (25%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
RY ++ +G G FG D + ELVA+K + K E EI + R RH
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-INHRSLRHPNIV 78
Query: 149 ------------------DIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
GG + F D R +QL+ V++ H +++ H
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
DLK EN LL DGS + +K+ DFG + H
Sbjct: 139 RDLKLENTLL-------------------DGS------PAPRLKIADFGYSKASVLHSQP 173
Query: 243 SYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHE 289
V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 174 KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ ++ + + P S
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANF----------GWSVHAPSSRRTT 167
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 168 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 212 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 236
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 237 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 85/226 (37%), Gaps = 73/226 (32%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+Q+LE+V H++ ++H +LKPEN+LL S K +A+
Sbjct: 117 QQILEAVLHCHQMGVVHRNLKPENLLLASK------------------------LKGAAV 152
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
KL DFG E Q T Y +PEV+ + P DLW+ G IL L G
Sbjct: 153 KLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
F + R + + GA D+P W
Sbjct: 213 FWDEDQ-----------------------HRLYQQIKAGA-YDFPSPE---------W-- 237
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
D + DL+ +L +P++R+ A EAL+HP+ +
Sbjct: 238 -----------DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+Q+LES+A+ H ++H +LKPEN+LL S K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
KL DFG + ++ T Y +PEV+ ++ P D+W+ G IL L G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ R++H DLK EN+LL + +K+ D+ F + + G
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG------------ 168
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
KL F Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 169 KLDAF-------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 216 G-QNLKELR--ERVL 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----------------------SINK 130
RY + +G G FG D KELVA+K + +I +
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVR 80
Query: 131 YREAAMIEIDVLQRLARHDIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
++E + L + + GG Y F D R +QLL V++ H +++ H
Sbjct: 81 FKEVILTPTH-LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
DLK EN LL DGS + +K+ DFG ++ H
Sbjct: 140 RDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSSVLHSQP 174
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQT-HENLEHLAMMERV 300
V T Y APEV+L ++ D+WS G L + G F+ E ++ ++R+
Sbjct: 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI 234
Query: 301 LG 302
L
Sbjct: 235 LS 236
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+Q+LES+A+ H ++H +LKPEN+LL S K +A+
Sbjct: 111 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 146
Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
KL DFG + ++ T Y +PEV+ ++ P D+W+ G IL L G
Sbjct: 147 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ ++ + + P S
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANF----------GWSVHAPSSRRTT 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+Q+LES+A+ H ++H +LKPEN+LL S K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
KL DFG + ++ T Y +PEV+ ++ P D+W+ G IL L G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK + +F
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------ANSF------- 194
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ + DLW++GCI+ +L +G
Sbjct: 195 -VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
+++ F H+ +IH D+KP NIL+ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 169 SGNSVXQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 24/122 (19%)
Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
R L +Q+L +V + H ++H DLKPEN+LL + K+ D+ LS DG + ++
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LSNMMSDGEFLRD--- 169
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
GS + + V+S R Y PEV D+WS G IL L G
Sbjct: 170 -------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTL 209
Query: 284 LF 285
F
Sbjct: 210 PF 211
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
++ +H+ +I+ DLKPENI+L +VK+ D+ S DG+
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--------------- 177
Query: 233 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
H++ T Y APE+++ G N D WS+G ++ ++ +G F +
Sbjct: 178 --------THTF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK 228
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 324
+ + + LP ++ A +K +R A
Sbjct: 229 TIDKILKCKLNLPPYLTQEARDLLKKLLKRNA 260
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
L EL Q+ + V ++H +LIH DLKP NI LV + VK+ D+ ++ DG ++
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS- 195
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
T Y +PE I + DL+++G IL EL
Sbjct: 196 ------------------------KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+Q+LE+V H++ ++H DLKPEN+LL S K +A+
Sbjct: 110 QQILEAVLHCHQMGVVHRDLKPENLLLASK------------------------CKGAAV 145
Query: 228 KLIDFGSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
KL DFG D T Y +PEV+ + P D+W+ G IL L G
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 364 DLLQGLLRYDPAERLKAREALRHPFFTR 391
+L+ +L +PA+R+ A EAL+HP+ +
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWVCQ 266
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 59/243 (24%)
Query: 96 ILSKM-GEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDI 150
IL KM G+G+FG+V + + AIK ++ ++ E M+E VL H
Sbjct: 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 151 GGTRYRSF--------------------------PIDLVRE--LGRQLLESVAFMHELRL 182
+ +F DL R +++ + F+H +
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 139
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
++ DLK +NILL ++K+ D+ G +N+ L D + F
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADF---------GMCKENM-------LGDAKTNXF----- 178
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
T Y APE++LG +N+ D WS G +L E+ G++ F Q E L H M+
Sbjct: 179 ---CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP 235
Query: 301 LGP 303
P
Sbjct: 236 FYP 238
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+ +L +VA+ H+L + H DLKPEN L ++ PD S +
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPL 148
Query: 228 KLIDFG-STTFEHQDHSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
KLIDFG + F+ V T +Y +P+V+ GL + CD WS G ++ L G F
Sbjct: 149 KLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 207
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
+ E + + P + +AE RR
Sbjct: 208 SAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+ +L +VA+ H+L + H DLKPEN L ++ PD S +
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPL 165
Query: 228 KLIDFG-STTFEHQDHSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
KLIDFG + F+ V T +Y +P+V+ GL + CD WS G ++ L G F
Sbjct: 166 KLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 224
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
+ E + + P + +AE RR
Sbjct: 225 SAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 261
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----------------------SINK 130
RY ++ +G G FG D + ELVA+K + +I +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVR 79
Query: 131 YREAAMIEIDVLQRLARHDIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
++E + L + + GG + F D R +QL+ V++ H +++ H
Sbjct: 80 FKEVILTPTH-LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
DLK EN LL DGS + +K+ DFG ++ H
Sbjct: 139 RDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSSVLHSQP 173
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 289
V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 23/144 (15%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHE 289
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F + +
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
Query: 290 NLEHLAMMERVLGPLPHHMVIRAD 313
++ + + E + P H + AD
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSAD 249
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
R L +Q+L +V + H ++H DLKPEN+LL + K+ D+ LS DG + +
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LSNMMSDGEFLRT--- 169
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
GS + + V+S R Y PEV D+WS G IL L G
Sbjct: 170 -------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTL 209
Query: 284 LF 285
F
Sbjct: 210 PF 211
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 121/311 (38%), Gaps = 62/311 (19%)
Query: 84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAM---IEI 139
AI + Y I +GEG+FG+V + ++ VA+K + R + K + M EI
Sbjct: 1 MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREI 60
Query: 140 DVLQRLAR-HDIGGTRYRSFPIDLV-------------------------RELGRQLLES 173
L+ L H I + P D+V R +Q++ +
Sbjct: 61 SYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICA 120
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
+ + H +++H DLKPEN+LL VK+ D+ LS DG++ K S
Sbjct: 121 IEYCHRHKIVHRDLKPENLLLDDNLNVKIADFG-LSNIMTDGNFLKTSCGSP-------- 171
Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLE 292
+Y APEVI G + P D+WS G +L + G F E
Sbjct: 172 ----------------NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD----E 211
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI- 351
+ + + + + M A+ RR D T ++ R W + LP+ +
Sbjct: 212 FIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLR 271
Query: 352 -MQHVDHSAGD 361
M+ V S D
Sbjct: 272 PMEEVQGSYAD 282
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
+H R+++ DLKPENILL ++++ D ++P+ IK
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTIK-------- 343
Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
V T Y APEV+ + + D W++GC+L E+ +G++ FQ +
Sbjct: 344 -------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 297 MERVLGPLPHHMVIRADRRA 316
+ER++ +P R +A
Sbjct: 397 VERLVKEVPEEYSERFSPQA 416
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 24/152 (15%)
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
++ +H+ +I+ DLKPENI+L +VK+ D+ S DG+
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--------------- 177
Query: 233 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
H + T Y APE+++ G N D WS+G ++ ++ +G F +
Sbjct: 178 --------THXF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK 228
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 324
+ + + LP ++ A +K +R A
Sbjct: 229 TIDKILKCKLNLPPYLTQEARDLLKKLLKRNA 260
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
+H R+++ DLKPENILL ++++ D ++P+ IK
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTIK-------- 343
Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
V T Y APEV+ + + D W++GC+L E+ +G++ FQ +
Sbjct: 344 -------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 297 MERVLGPLPHHMVIRADRRA 316
+ER++ +P R +A
Sbjct: 397 VERLVKEVPEEYSERFSPQA 416
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H ++IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 116 ELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAA 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
+ + RV P + GAR
Sbjct: 210 TYQDTYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++P++R RE L HP+ T + +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 99
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 159
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK + +F
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------ANSF------- 195
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 196 -VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +++A
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQA-------RANAF----------------- 192
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 193 -VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 117/332 (35%), Gaps = 100/332 (30%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
T Y + +G G++ C A+KI I+K + EI++L R +H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQH 75
Query: 149 ----------DIGGTRYRSFPI----DLVRELGRQ--------------LLESVAFMHEL 180
D G Y + +L+ ++ RQ + ++V ++H
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
++H DLKP NIL Y +I++ DFG
Sbjct: 136 GVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAKQLRA 172
Query: 241 DHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
++ +++ T ++ APEV+ G++ CD+WS+G +L + +G F
Sbjct: 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN---------- 222
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
GP D E+ R + +S+ K
Sbjct: 223 ----GP---------DDTPEEILARIGSGKFSLSGGYWNSVSDTAK-------------- 255
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
DL+ +L DP +RL A LRHP+
Sbjct: 256 ------DLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 101
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 161
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 162 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 196
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 197 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
+++ F H+ +IH D+KP NI++ + VKV D+ A + D
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 185
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
G++ + + V+ T Y +PE G + D++S+GC+L E+ +GE F
Sbjct: 186 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 83/226 (36%), Gaps = 53/226 (23%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
RY ++ +G G FG D + ELVA+K + K E EI + R RH
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPNIV 78
Query: 149 ------------------DIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
GG + F D R +QL+ V++ H +++ H
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DLK EN LL + P K + S + PKS+
Sbjct: 139 RDLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKST------------------- 176
Query: 245 VVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 289
V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 177 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 62/235 (26%)
Query: 83 VFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----NKYREAAM 136
VF E++ + IL +G+G+FG+V N+ K++ A+K + N+ R
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNV-F 63
Query: 137 IEIDVLQRLA-------------RHDI---------GGTRYR-----SFPIDLVRELGRQ 169
E+ ++Q L D+ G RY F + V+ +
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE 123
Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
L+ ++ ++ R+IH D+KP+NILL +V + D+ + LP+ + I
Sbjct: 124 LVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM----------LPRETQI-- 171
Query: 230 IDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSG 281
+ + T+ Y APE+ G G+++ D WS+G EL G
Sbjct: 172 -------------TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLY 75
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 135
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 136 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 170
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 76
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 136
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 137 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 171
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 191
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 99
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 159
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 194
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 120/332 (36%), Gaps = 111/332 (33%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
+ I +G+G FG V + ++K ++A+K++ E A +E + +Q RH
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 149 DIGGTRYRSF-------------PIDLV-RELGR--------------QLLESVAFMHEL 180
Y F P+ V REL + +L ++++ H
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
R+IH D+KPEN+LL SA +K+ D+ + + P S L
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL----------- 163
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
T Y PE+I G + DLWS+G + E G+ F+ + E + RV
Sbjct: 164 -----CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 218
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
P + GAR
Sbjct: 219 EFTFP------------DFVTEGAR----------------------------------- 231
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
DL+ LL+++P++R RE L HP+ T +
Sbjct: 232 ---DLISRLLKHNPSQRPMLREVLEHPWITAN 260
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 74
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 134
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 169
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 95
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 155
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK + +F
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------ANSF------- 191
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 192 -VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 191
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 76/224 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
DL+ LL+++P++R RE L HP+ T +
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 73
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 133
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 134 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 168
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 58/244 (23%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHD 149
+ + +G+G+FG+V + + AIK ++ ++ E M+E VL H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 150 IGGTRYRSF--------------------------PIDLVRE--LGRQLLESVAFMHELR 181
+ +F DL R +++ + F+H
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
+++ DLK +NILL ++K+ D+ G +N+ L D + F
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADF---------GMCKENM-------LGDAKTNEF---- 179
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMER 299
T Y APE++LG +N+ D WS G +L E+ G++ F Q E L H M+
Sbjct: 180 ----CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN 235
Query: 300 VLGP 303
P
Sbjct: 236 PFYP 239
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 95
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 155
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 190
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F + + F N
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-----FGN------- 167
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
KL +F + Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 168 KLDEF-------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 215 G-QNLKELR--ERVL 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 80
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 140
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 141 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 175
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 176 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 76/224 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL SA +K+ D+ + + P S
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXX 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G+ F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
DL+ LL+++P++R RE L HP+ T +
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 86/234 (36%), Gaps = 66/234 (28%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPDYKFLSRSSKDGSYFKNLPKS 224
R + ++ F+H + H DLKPENIL S E VK+ D+
Sbjct: 118 RDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDL----------------G 161
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELC 279
S +KL + T + + + Y APEV+ ++ CDLWS+G +L +
Sbjct: 162 SGMKL-NNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIML 220
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG F H GA W G R
Sbjct: 221 SGYPPFVGH---------------------------------CGADCGWDRGEVCRVCQN 247
Query: 340 AVWKLLR-----LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
+++ ++ P+ H+ A DLI LL D +RL A + L+HP+
Sbjct: 248 KLFESIQEGKYEFPDKDWAHISSEAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 85/228 (37%), Gaps = 57/228 (25%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
RY ++ +G G FG D + ELVA+K + K E EI + R RH
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPNIV 78
Query: 149 ------------------DIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
GG + F D R +QL+ V++ H +++ H
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
DLK EN LL DGS + +K+ FG ++ H
Sbjct: 139 RDLKLENTLL-------------------DGS------PAPRLKICAFGYSKSSVLHSQP 173
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 289
V T Y APEV+L ++ D+WS G L + G F+ E
Sbjct: 174 KDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
L EL Q+ + V ++H +LI+ DLKP NI LV + VK+ D+ ++ DG ++
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS- 181
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
T Y +PE I + DL+++G IL EL
Sbjct: 182 ------------------------KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
R L +Q+L V + H ++H DLKPEN+LL + K+ D+ LS DG + +
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LSNMMSDGEFLRX--- 174
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
GS + + V+S R Y PEV D+WS G IL L G
Sbjct: 175 -------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSSGVILYALLCGTL 214
Query: 284 LF 285
F
Sbjct: 215 PF 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 24/132 (18%)
Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
R R P + R ++ ++ ++HE +I+ DLK +N+LL S ++K+ DY +
Sbjct: 146 RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
G ++TF T +Y APE++ G + + D W++G
Sbjct: 206 PGD----------------TTSTF--------CGTPNYIAPEILRGEDYGFSVDWWALGV 241
Query: 274 ILVELCSGEALF 285
++ E+ +G + F
Sbjct: 242 LMFEMMAGRSPF 253
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
R R P + R ++ ++ ++HE +I+ DLK +N+LL S ++K+ DY +
Sbjct: 103 RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
G TT S T +Y APE++ G + + D W++G
Sbjct: 163 P------------------GDTT------SXFCGTPNYIAPEILRGEDYGFSVDWWALGV 198
Query: 274 ILVELCSGEALF 285
++ E+ +G + F
Sbjct: 199 LMFEMMAGRSPF 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F VV + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 103
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
F D +R++G +++ ++ ++H +IH DL
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 163
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 164 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 198
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 199 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 84/228 (36%), Gaps = 64/228 (28%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIG 151
+ + ++G G FG V+ + E VAIK R K RE +EI ++++L ++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 152 GTR------YRSFPIDL------------------------------VRELGRQLLESVA 175
R + P DL +R L + ++
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
++HE R+IH DLKPENI+L P+ K+ID G
Sbjct: 136 YLHENRIIHRDLKPENIVLQPG------------------------PQRLIHKIIDLGYA 171
Query: 236 TFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
Q + V T Y APE++ + D WS G + E +G
Sbjct: 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 90/236 (38%), Gaps = 69/236 (29%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---------AMIEIDV 141
+ +Y +S +G G FG V D EK + V +K ++ + +EI +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 142 LQRLARHDI---------------------GGTRYRSFPID--------LVRELGRQLLE 172
L R+ +I G +F ID L + RQL+
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAF-IDRHPRLDEPLASYIFRQLVS 141
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
+V ++ +IH D+K ENI++ D+ IKLIDF
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAE-------DF--------------------TIKLIDF 174
Query: 233 GSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALF 285
GS + + + T Y APEV++G + P ++WS+G L L E F
Sbjct: 175 GSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 84/228 (36%), Gaps = 64/228 (28%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIG 151
+ + ++G G FG V+ + E VAIK R K RE +EI ++++L ++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 152 GTR------YRSFPIDL------------------------------VRELGRQLLESVA 175
R + P DL +R L + ++
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
++HE R+IH DLKPENI+L P+ K+ID G
Sbjct: 137 YLHENRIIHRDLKPENIVLQPG------------------------PQRLIHKIIDLGYA 172
Query: 236 TFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
Q + V T Y APE++ + D WS G + E +G
Sbjct: 173 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 111/284 (39%), Gaps = 72/284 (25%)
Query: 48 GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--YRILSKMGEGTF 105
GN G+ C + ++P S P +P +KD + PR ++ K+G G F
Sbjct: 157 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 201
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---------------- 149
G+V N K VA+K ++ + EA + E +V++ L +HD
Sbjct: 202 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVTKEPIYI 259
Query: 150 -------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 196
+ P+ + + Q+ E +AF+ + IH DL+ NIL+ +
Sbjct: 260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 319
Query: 197 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEV 256
+ K+ D+ L+R +D Y IK + APE
Sbjct: 320 SLVCKIADFG-LARVIEDNEYTAREGAKFPIK----------------------WTAPEA 356
Query: 257 ILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
I + D+WS G +L+E+ + G + N E + +ER
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 161
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
TF ++ ++ S Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 162 ------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 215 G-QNLKELR--ERVL 226
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 161
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
TF ++ ++ S Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 162 ------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 215 G-QNLKELR--ERVL 226
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 161
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
TF ++ ++ S Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 162 ------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 215 G-QNLKELR--ERVL 226
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
R R P + R ++ ++ ++HE +I+ DLK +N+LL S ++K+ DY +
Sbjct: 99 RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 158
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
G TT S T +Y APE++ G + + D W++G
Sbjct: 159 P------------------GDTT------SXFCGTPNYIAPEILRGEDYGFSVDWWALGV 194
Query: 274 ILVELCSGEALF 285
++ E+ +G + F
Sbjct: 195 LMFEMMAGRSPF 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
R R P + R ++ ++ ++HE +I+ DLK +N+LL S ++K+ DY +
Sbjct: 114 RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 173
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
G TT S T +Y APE++ G + + D W++G
Sbjct: 174 P------------------GDTT------SXFCGTPNYIAPEILRGEDYGFSVDWWALGV 209
Query: 274 ILVELCSGEALF 285
++ E+ +G + F
Sbjct: 210 LMFEMMAGRSPF 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F + + F N
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT-----FGN------- 167
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
KL F Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 168 KLDAF-------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 215 G-QNLKEL--RERVL 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
T Y + +G G++ C A+KI I+K + EI++L R +H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRYGQH 75
Query: 149 ----------DIGGTRYRSFPI----DLVRELGRQ--------------LLESVAFMHEL 180
D G Y + +L+ ++ RQ + ++V ++H
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
++H DLKP NIL Y +I++ DFG
Sbjct: 136 GVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAKQLRA 172
Query: 241 DHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
++ + + T ++ APEV+ G++ CD+WS+G +L +G F
Sbjct: 173 ENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
+GEG+F V + AIKI+ R I K + + E DV+ RL H Y
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
+F D +R++G +++ ++ ++H +IH DL
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
KPENILL ++++ D+ K LS SK +
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 191
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
V T Y +PE++ DLW++GCI+ +L +G
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 83/243 (34%), Gaps = 80/243 (32%)
Query: 153 TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 212
R + F + R Q++ + ++H ++H DL N+LL
Sbjct: 104 NRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT----------------- 146
Query: 213 KDGSYFKNLPKSSAIKLIDFGSTT---FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLW 269
++ IK+ DFG T H+ H + T +Y +PE+ D+W
Sbjct: 147 ----------RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVW 196
Query: 270 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 329
S+GC+ L G F T + V L + V+ AD + A+
Sbjct: 197 SLGCMFYTLLIGRPPFDT----------DTVKNTL--NKVVLADYEMPSFLSIEAK---- 240
Query: 330 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
DL+ LLR +PA+RL L HPF
Sbjct: 241 ----------------------------------DLIHQLLRRNPADRLSLSSVLDHPFM 266
Query: 390 TRD 392
+R+
Sbjct: 267 SRN 269
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 113 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 154
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
TF ++ ++ S Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 155 ------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 208 G-QNLKELR--ERVL 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 24/99 (24%)
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
++H DLKP N+ L + VK+ D+ + D S+ K TF
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK----------------TF---- 176
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
V T +Y +PE + + +N D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
P D+ R +++ ++ +H+L +H D+KP+N+LL ++++ D+
Sbjct: 188 LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADF------------ 235
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVG 272
S +K+ D G+ S V T Y +PE++ G+G P CD WS+G
Sbjct: 236 ------GSCLKMNDDGTVQ-----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 284
Query: 273 CILVELCSGEALFQTHENLE 292
+ E+ GE F +E
Sbjct: 285 VCMYEMLYGETPFYAESLVE 304
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
P D+ R +++ ++ +H+L +H D+KP+N+LL ++++ D+
Sbjct: 172 LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADF------------ 219
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVG 272
S +K+ D G+ S V T Y +PE++ G+G P CD WS+G
Sbjct: 220 ------GSCLKMNDDGTVQ-----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 268
Query: 273 CILVELCSGEALFQTHENLE 292
+ E+ GE F +E
Sbjct: 269 VCMYEMLYGETPFYAESLVE 288
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ ++H DLK EN+LL + +K+ D+ F +
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 161
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
TF ++ ++ Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 162 ------EFTFGNKLDAF-CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 215 G-QNLKELR--ERVL 226
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
RQ++ +V + H+ ++H DLK EN+LL +K+ D+ F S G+ S
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGF-SNEFTVGNKLDTFCGSPP- 178
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
Y APE+ G ++ P D+WS+G IL L SG F
Sbjct: 179 -----------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
Query: 287 THENLEHLAMMERVL 301
+NL+ L ERVL
Sbjct: 216 G-QNLKELR--ERVL 227
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 81/229 (35%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL S +K+ D+ + + P S
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADF----------GWSVHAPSSRRTT 169
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
L T Y PE+I G + DLWS+G + E G F+ H
Sbjct: 170 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
E + RV P + GAR
Sbjct: 214 TYQETYRRISRVEFTFP------------DFVTEGAR----------------------- 238
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++ ++RL E L HP+ + +P+
Sbjct: 239 ---------------DLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 34/121 (28%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q LE + ++H R++H D+K +N+LL S DGS+
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLL-----------------SSDGSH---------AA 207
Query: 229 LIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L DFG D Y+ T + APEV+LG + D+WS C+++ + +
Sbjct: 208 LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 281 G 281
G
Sbjct: 268 G 268
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 34/121 (28%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q LE + ++H R++H D+K +N+LL S DGS+
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLL-----------------SSDGSH---------AA 226
Query: 229 LIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L DFG D Y+ T + APEV+LG + D+WS C+++ + +
Sbjct: 227 LCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
Query: 281 G 281
G
Sbjct: 287 G 287
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 24/99 (24%)
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
++H DLKP N+ L + VK+ D+ + D S+ K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF-------------------- 176
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
V T +Y +PE + + +N D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 51/248 (20%)
Query: 156 RSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
+ P +++ ++ +L +A++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 109 KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV------- 161
Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
+ +LID + +F V TR Y APE + G ++ D+WS+G
Sbjct: 162 -----------SGQLIDSMANSF--------VGTRSYMAPERLQGTHYSVQSDIWSMGLS 202
Query: 275 LVELCSGEALFQTHENLEHLAMMER--VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 332
LVEL G + E A+ R V G I R G +D
Sbjct: 203 LVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMD----- 257
Query: 333 TSRDSMRAVWKLL---------RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA 383
SR +M A+++LL +LPN + D + + L +PAER +
Sbjct: 258 -SRPAM-AIFELLDYIVNEPPPKLPNGVF------TPDFQEFVNKCLIKNPAERADLKML 309
Query: 384 LRHPFFTR 391
H F R
Sbjct: 310 TNHTFIKR 317
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 27/128 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
FP + + ++ ++ ++H +I+ DLKPENILL
Sbjct: 103 FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL----------------------- 139
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
K+ IK+ DFG + + T Y APEV+ +N D WS G ++ E
Sbjct: 140 ----DKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE 195
Query: 278 LCSGEALF 285
+ +G F
Sbjct: 196 MLAGYTPF 203
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 147/375 (39%), Gaps = 88/375 (23%)
Query: 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQV---VECFDNEKKELVAIK-IVRSINKYRE 133
KD ++ L+ ++I K+GEGTF V +E +A+K ++ + + R
Sbjct: 7 KDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRI 66
Query: 134 AAMIEIDVLQRLARHD-IGGTRY------------------------RSFPIDLVRELGR 168
AA E+ L D + G +Y S VRE
Sbjct: 67 AA--ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYML 124
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
L +++ +H+ ++H D+KP N L ++ Y + G++ + I+
Sbjct: 125 NLFKALKRIHQFGIVHRDVKPSNFLYNR----RLKKYALVDFGLAQGTH------DTKIE 174
Query: 229 LIDFGSTTFEH----QDHSYVVSTRH-----------YRAPEVILGL-GWNYPCDLWSVG 272
L+ F + + Q+ + +R +RAPEV+ D+WS G
Sbjct: 175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234
Query: 273 CILVELCSGE-ALFQTHENLEHLAMMERVLGPLPHHMVIRADR---RAEKYFRRGARLDW 328
I + L SG ++ ++L LA + M IR R +A K F G +
Sbjct: 235 VIFLSLLSGRYPFYKASDDLTALAQI----------MTIRGSRETIQAAKTF--GKSILC 282
Query: 329 PDGATSRDSMRAVWKLLR--------LPNLIMQHVDHSAG------DLIDLLQGLLRYDP 374
++D +R + + LR L + I H + G + DLL LL +P
Sbjct: 283 SKEVPAQD-LRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNP 341
Query: 375 AERLKAREALRHPFF 389
A R+ A EAL HPFF
Sbjct: 342 ASRITAEEALLHPFF 356
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 80/230 (34%), Gaps = 78/230 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L ++++ H R+IH D+KPEN+LL S + +K
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGS---------------------------NGELK 152
Query: 229 LIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
+ DFG S + T Y PE+I G + DLWS+G + E G F+
Sbjct: 153 IADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
H E + RV P + GAR
Sbjct: 213 HTYQETYRRISRVEFTFP------------DFVTEGAR---------------------- 238
Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
DL+ LL+++ ++RL E L HP+ + +P+
Sbjct: 239 ----------------DLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 27/121 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSA 226
+Q+LE + ++H+ +++H D+K +N+L+ + V K+ D+ R
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR---------------- 172
Query: 227 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEAL 284
+ I+ + TF T Y APE+I G+ D+WS+GC ++E+ +G+
Sbjct: 173 LAGINPCTETF--------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
Query: 285 F 285
F
Sbjct: 225 F 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 145 LARHDIGGTRYRSFPID--LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 202
+ +H + ++S +D + + R++LE + ++H+ IH D+K NILL V++
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 157
Query: 203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-G 261
D+ + + G +N + TF V T + APEV+ + G
Sbjct: 158 ADFGVSAFLATGGDITRNKVRK-----------TF--------VGTPCWMAPEVMEQVRG 198
Query: 262 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
+++ D+WS G +EL +G A + + ++ L +
Sbjct: 199 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 233
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 145 LARHDIGGTRYRSFPID--LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 202
+ +H + ++S +D + + R++LE + ++H+ IH D+K NILL V++
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162
Query: 203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-G 261
D+ + + G +N + TF V T + APEV+ + G
Sbjct: 163 ADFGVSAFLATGGDITRNKVRK-----------TF--------VGTPCWMAPEVMEQVRG 203
Query: 262 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
+++ D+WS G +EL +G A + + ++ L +
Sbjct: 204 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 238
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 27/121 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSA 226
+Q+LE + ++H+ +++H D+K +N+L+ + V K+ D+ S
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG----------------TSKR 158
Query: 227 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEAL 284
+ I+ + TF T Y APE+I G+ D+WS+GC ++E+ +G+
Sbjct: 159 LAGINPCTETF--------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
Query: 285 F 285
F
Sbjct: 211 F 211
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 60/236 (25%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQR----- 144
+ IL +G G FG+V ++ A+KI+ + A E DVL
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 145 ----------------LARHDIGG---TRYRSFPIDLVRELGR----QLLESVAFMHELR 181
+ + +GG T F L E+ R +++ ++ +H+L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
+H D+KP+NIL+ ++++ D+ S +KL++ G+
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADF------------------GSCLKLMEDGTV-----Q 232
Query: 242 HSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHENLE 292
S V T Y +PE++ + + CD WS+G + E+ GE F +E
Sbjct: 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 162 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
++H DLKP N+ L + VK+ D+ + D + K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-------------------- 176
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
V T +Y +PE + + +N D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 60/210 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF- 158
+G G FG V C + + VAIK + S ++ R+A ++E+ L R+ +I
Sbjct: 17 VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 159 PIDLVRELGR---------------------------QLLESVAFMHELR---LIHTDLK 188
P+ LV E Q + VA++H ++ LIH DLK
Sbjct: 74 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 133
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
P N+LLV+ + +K+ DFG+ + +
Sbjct: 134 PPNLLLVAG--------------------------GTVLKICDFGTACDIQTHMTNNKGS 167
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ APEV G ++ CD++S G IL E+
Sbjct: 168 AAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 60/210 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF- 158
+G G FG V C + + VAIK + S ++ R+A ++E+ L R+ +I
Sbjct: 16 VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 159 PIDLVRELGR---------------------------QLLESVAFMHELR---LIHTDLK 188
P+ LV E Q + VA++H ++ LIH DLK
Sbjct: 73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
P N+LLV+ + +K+ DFG+ + +
Sbjct: 133 PPNLLLVAG--------------------------GTVLKICDFGTACDIQTHMTNNKGS 166
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ APEV G ++ CD++S G IL E+
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 113/284 (39%), Gaps = 82/284 (28%)
Query: 48 GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--YRILSKMGEGTF 105
GN G+ C + ++P S P +P +KD + PR ++ K+G G F
Sbjct: 151 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 195
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---------------- 149
G+V N K VA+K ++ + EA + E +V++ L +HD
Sbjct: 196 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVTKEPIYI 253
Query: 150 -------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 196
+ P+ + + Q+ E +AF+ + IH DL+ NIL+ +
Sbjct: 254 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 313
Query: 197 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEV 256
+ K+ D+ ++ G+ F K +A + I+FGS T +
Sbjct: 314 SLVCKIADFGL----ARVGAKFP--IKWTAPEAINFGSFTIK------------------ 349
Query: 257 ILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
D+WS G +L+E+ + G + N E + +ER
Sbjct: 350 ---------SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 384
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 65
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 159
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 87/218 (39%), Gaps = 64/218 (29%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARH---- 148
L ++G G+FG V D E+VAIK + + N+ + + E+ LQ+L RH
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTI 117
Query: 149 DIGGTRYRSFPIDLVRE--LGRQ----------------------LLESVAFMHELRLIH 184
G R LV E LG L+ +A++H +IH
Sbjct: 118 QYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
D+K NIL L + +KL DFGS + + +
Sbjct: 178 RDVKAGNIL---------------------------LSEPGLVKLGDFGSASIMAPANXF 210
Query: 245 VVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELC 279
V T ++ APEVIL + ++ D+WS+G +EL
Sbjct: 211 -VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 92/240 (38%), Gaps = 82/240 (34%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
R + RQ++ +VA++H H DLKPEN+L EY K
Sbjct: 110 TRVVFRQIVSAVAYVHSQGYAHRDLKPENLLF--DEYHK--------------------- 146
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVST----RHYRAPEVILGLGW-NYPCDLWSVGCILVE 277
+KLIDFG + Y + T Y APE+I G + D+WS+G +L
Sbjct: 147 ----LKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYV 202
Query: 278 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 337
L G F ++ +A+ ++++ RG + D P +
Sbjct: 203 LMCG---FLPFDDDNVMALYKKIM--------------------RG-KYDVPKWLS---- 234
Query: 338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
P+ I+ LLQ +L+ DP +R+ + L HP+ +D P
Sbjct: 235 ----------PSSIL------------LLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPV 272
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 59/217 (27%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
+GEG FG+V + C+D + E+VA+K +++ ++R EID+L+ L I
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI--I 96
Query: 154 RYRS----------------FPIDLVRE--------------LGRQLLESVAFMHELRLI 183
+Y+ P+ +R+ +Q+ E +A++H I
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYI 156
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H DL N+LL + VK+ D+ L+++ +G + + D S F
Sbjct: 157 HRDLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEXYRVRE-------DGDSPVF------ 202
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE + + Y D+WS G L EL +
Sbjct: 203 -------WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 56/231 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLAR-- 147
+ L +G+G+FG+V+ +EL AIKI++ + E M+E VL L +
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 148 -----HDIGGTRYRSFPI-------DL---VRELGR-----------QLLESVAFMHELR 181
H T R + + DL ++++G+ ++ + F+H+
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
+I+ DLK +N++L S ++K+ D+ D G TT E
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD------------------GVTTRE--- 179
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
T Y APE+I + D W+ G +L E+ +G+ F + E
Sbjct: 180 ---FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 87/218 (39%), Gaps = 64/218 (29%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARH---- 148
L ++G G+FG V D E+VAIK + + N+ + + E+ LQ+L RH
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTI 78
Query: 149 DIGGTRYRSFPIDLVRE--LGRQ----------------------LLESVAFMHELRLIH 184
G R LV E LG L+ +A++H +IH
Sbjct: 79 QYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
D+K NIL L + +KL DFGS + + +
Sbjct: 139 RDVKAGNIL---------------------------LSEPGLVKLGDFGSASIMAPANXF 171
Query: 245 VVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELC 279
V T ++ APEVIL + ++ D+WS+G +EL
Sbjct: 172 -VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 59/215 (27%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
+GEG FG+V + C+D + E+VA+K +++ ++R EID+L+ L I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI--I 79
Query: 154 RYRS----------------FPIDLVRE--------------LGRQLLESVAFMHELRLI 183
+Y+ P+ +R+ +Q+ E +A++H I
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYI 139
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H +L N+LL + VK+ D+ L+++ +G + + + D S F
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF------ 185
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ APE + + Y D+WS G L EL
Sbjct: 186 -------WYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 88/241 (36%), Gaps = 84/241 (34%)
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
L+ + RQ+ ++ ++H + H D+KPEN L +
Sbjct: 169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN------------------------ 204
Query: 222 PKSSAIKLIDFG-STTF------EHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVG 272
KS IKL+DFG S F E+ + T ++ APEV+ +Y CD WS G
Sbjct: 205 -KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 273 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 332
+L HL +M V P P G
Sbjct: 264 VLL-----------------HLLLMGAV--PFP-------------------------GV 279
Query: 333 TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI--DLLQGLLRYDPAERLKAREALRHPFFT 390
D++ V L ++ +++ + DLL LL + ER A AL+HP+ +
Sbjct: 280 NDADTISQVLN----KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335
Query: 391 R 391
+
Sbjct: 336 Q 336
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG +G+V + +E VA+KIV R+++ E EI + L ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 117/334 (35%), Gaps = 109/334 (32%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM------IEIDVLQR--- 144
+ I+ +G+G FG V + + K ++A+K++ +E IEI R
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 145 -LARHDIGGTRYRSFPI-------DLVRELGR--------------QLLESVAFMHELRL 182
L ++ R R + + +L +EL + +L +++ + HE ++
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQD 241
IH D+KPEN+L+ YK +K+ DFG S
Sbjct: 136 IHRDIKPENLLM---------GYK------------------GELKIADFGWSVHAPSLR 168
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
+ T Y PE+I G + DLW G + E G F + + E
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--------- 219
Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
H ++ D + + G++
Sbjct: 220 ---THRRIVNVDLKFPPFLSDGSK------------------------------------ 240
Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
DL+ LLRY P +RL + + HP+ + RR
Sbjct: 241 --DLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 59/215 (27%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
+GEG FG+V + C+D + E+VA+K +++ ++R EID+L+ L I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI--I 79
Query: 154 RYRS----------------FPIDLVRE--------------LGRQLLESVAFMHELRLI 183
+Y+ P+ +R+ +Q+ E +A++H I
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYI 139
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H +L N+LL + VK+ D+ L+++ +G + + + D S F
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF------ 185
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ APE + + Y D+WS G L EL
Sbjct: 186 -------WYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
D++R L +Q+LE V ++H+ ++H DLKP+NILL S
Sbjct: 132 DVIR-LIKQILEGVYYLHQNNIVHLDLKPQNILLSS------------------------ 166
Query: 221 LPKSSAIKLIDFG-STTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ IK++DFG S H + ++ T Y APE++ D+W++G I L
Sbjct: 167 IYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYML 226
Query: 279 CSGEALFQTHENLEHLAMMERV 300
+ + F +N E + +V
Sbjct: 227 LTHTSPFVGEDNQETYLNISQV 248
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 56/231 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLAR-- 147
+ L +G+G+FG+V+ EL A+KI++ + E M+E VL +
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 148 -----HDIGGTRYRSFPI-------DL---VRELGR-----------QLLESVAFMHELR 181
H T R + + DL ++++GR ++ + F+
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
+I+ DLK +N++L S ++K+ D+ + DG K
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF-------------------- 502
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
T Y APE+I + D W+ G +L E+ +G+A F+ + E
Sbjct: 503 ----CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 59/215 (27%)
Query: 99 KMGEGTFGQVVECFDNEK----------------KELVAI------KIVRSINKYREAAM 136
++G G+FG+V D + +ELVA +IV RE
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 138
Query: 137 IEIDVLQRLARHDIGG--TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 194
+ I ++ L +G + P D Q LE + ++H R++H D+K +N+LL
Sbjct: 139 VNI-FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 197
Query: 195 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--------SYVV 246
S DGS L DFG D Y+
Sbjct: 198 -----------------SSDGSR---------AALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
T + APEV++G + D+WS C+++ + +G
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 84/234 (35%), Gaps = 66/234 (28%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
+ + ++ F+H + H DLKPENIL VK+ D+ S +G P S
Sbjct: 118 QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS---PIS 174
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELC 279
+ L GS Y APEV+ ++ CDLWS+G IL L
Sbjct: 175 TPELLTPCGSA--------------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG F R G+ W G
Sbjct: 221 SGYPPF---------------------------------VGRCGSDCGWDRGEACPACQN 247
Query: 340 AVWKLLR-----LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
+++ ++ P+ H+ +A DLI LL D +RL A + L+HP+
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLI---SKLLVRDAKQRLSAAQVLQHPW 298
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 56/231 (24%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLAR-- 147
+ L +G+G+FG+V+ EL A+KI++ + E M+E VL +
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 148 -----HDIGGTRYRSFPI-------DL---VRELGR-----------QLLESVAFMHELR 181
H T R + + DL ++++GR ++ + F+
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
+I+ DLK +N++L S ++K+ D+ + DG K
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF-------------------- 181
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
T Y APE+I + D W+ G +L E+ +G+A F+ + E
Sbjct: 182 ----CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 61/140 (43%), Gaps = 49/140 (35%)
Query: 161 DLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
D V ++ Q +V MH + +IH DLK EN+LL S G+
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL-----------------SNQGT-- 176
Query: 219 KNLPKSSAIKLIDFGS-TTFEHQ-DHSYVV-------------STRHYRAPEVILGLGWN 263
IKL DFGS TT H D+S+ +T YR PE+I L N
Sbjct: 177 --------IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII-DLYSN 227
Query: 264 YPC----DLWSVGCILVELC 279
+P D+W++GCIL LC
Sbjct: 228 FPIGEKQDIWALGCILYLLC 247
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 84/234 (35%), Gaps = 66/234 (28%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
+ + ++ F+H + H DLKPENIL VK+ D+ S +G P S
Sbjct: 118 QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS---PIS 174
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELC 279
+ L GS Y APEV+ ++ CDLWS+G IL L
Sbjct: 175 TPELLTPCGSA--------------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
SG F R G+ W G
Sbjct: 221 SGYPPF---------------------------------VGRCGSDCGWDRGEACPACQN 247
Query: 340 AVWKLLR-----LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
+++ ++ P+ H+ +A DLI LL D +RL A + L+HP+
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 34/121 (28%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q LE + ++H R++H D+K +N+LL S DGS
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLL-----------------SSDGSR---------AA 191
Query: 229 LIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L DFG D Y+ T + APEV++G + D+WS C+++ + +
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 251
Query: 281 G 281
G
Sbjct: 252 G 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 34/121 (28%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q LE + ++H R++H D+K +N+LL S DGS
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLL-----------------SSDGSR---------AA 207
Query: 229 LIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L DFG D Y+ T + APEV++G + D+WS C+++ + +
Sbjct: 208 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 267
Query: 281 G 281
G
Sbjct: 268 G 268
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 62/247 (25%)
Query: 85 AIGENLTPR-----YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAA 135
IG N + R + + +G+G+FG+V+ E +L A+K+++ + E
Sbjct: 11 GIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECT 70
Query: 136 MIEIDVLQRLARHDI----------------------GG------TRYRSFPIDLVRELG 167
M E +L H GG + R F R
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
+++ ++ F+H+ +I+ DLK +N+LL + K+ D+ K+G
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM----CKEG------------ 174
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
I G TT + T Y APE++ + + D W++G +L E+ G A F+
Sbjct: 175 --ICNGVTT------ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
Query: 288 HENLEHL 294
EN + L
Sbjct: 227 -ENEDDL 232
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 62/224 (27%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
+ ++ +GEG G+V + +E VA+KIV R+++ E EI + + L ++
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
GG + D+ + QL+ V ++H + +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H D+KPEN+LL + +K+ D+ +T F + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
+++ T Y APE++ ++ P D+WS G +L + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 26 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 145 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 185
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 186 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 235
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 236 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 273
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
++ K+G G FG+V N K VA+K ++ + EA + E +V++ L +HD
Sbjct: 18 KLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKL 75
Query: 150 ------------------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
+ P+ + + Q+ E +AF+ + IH
Sbjct: 76 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 135
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ ++ K+ D+ L+R +D Y IK
Sbjct: 136 DLRAANILVSASLVCKIADFG-LARVIEDNEYTAREGAKFPIK----------------- 177
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE I + D+WS G +L+E+ + G + N E + +ER
Sbjct: 178 -----WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 227
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 141 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 181
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 182 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 231
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 232 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 85/226 (37%), Gaps = 67/226 (29%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDI-- 150
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 151 --------GG-----TRY-----------RSFPIDLVRELGR------------QLLESV 174
GG T Y R DL +E GR Q+ + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
AF+ IH D+ N+LL + K+ D+ D +Y +K
Sbjct: 174 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK------ 227
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE I + D+WS G +L E+ S
Sbjct: 228 ----------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 85/226 (37%), Gaps = 67/226 (29%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDI-- 150
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H+
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 151 --------GG-----TRY-----------RSFPIDLVRELGR------------QLLESV 174
GG T Y R DL +E GR Q+ + +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
AF+ IH D+ N+LL + K+ D+ D +Y +K
Sbjct: 166 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK------ 219
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE I + D+WS G +L E+ S
Sbjct: 220 ----------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 21 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 140 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 180
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 181 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 230
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 231 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 268
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P ++ ++ +++ + ++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 163 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------- 213
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
+ +LID + +F V TR Y +PE + G ++ D+WS+G LV
Sbjct: 214 ---------SGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 256
Query: 277 ELCSG 281
E+ G
Sbjct: 257 EMAVG 261
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 135 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 175
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 225
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 226 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
+H + LIH D+KP+N+LL ++K+ D+ + +K+ + G
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADF------------------GTCMKMDETGMV- 230
Query: 237 FEHQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 285
H D + V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 231 --HCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 87/231 (37%), Gaps = 54/231 (23%)
Query: 98 SKMGEGTFGQVV--------------------ECFDNEKKELVAIKIVRSINKYREAAMI 137
+++G G+FG V E F + E+ ++ R +N +
Sbjct: 42 TRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 138 EIDVLQRLARHDIGGTRYR-------SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE 190
D L + + G + Y+ F + + ++ RQ + + ++H +IH D+K
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSN 161
Query: 191 NILLVSAEYVKVPDYKFLSRSSK-DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
NI L VK+ D+ + S+ GS P S +
Sbjct: 162 NIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL---------------------- 199
Query: 250 HYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
+ APEVI N + D++S G +L EL +GE + N + + M
Sbjct: 200 -WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 11 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 130 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 170
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 171 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 220
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 221 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 258
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 114/328 (34%), Gaps = 109/328 (33%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM------IEIDVLQR----LARHD 149
+G+G FG V + + K ++A+K++ +E IEI R L ++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 150 IGGTRYRSFPI-------DLVRELGR--------------QLLESVAFMHELRLIHTDLK 188
R R + + +L +EL + +L +++ + HE ++IH D+K
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 142
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHSYVVS 247
PEN+L+ YK +K+ DFG S +
Sbjct: 143 PENLLM---------GYK------------------GELKIADFGWSVHAPSLRRRXMCG 175
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHH 307
T Y PE+I G + DLW G + E G F + + E H
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------------THR 223
Query: 308 MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ 367
++ D + + G++ DL+
Sbjct: 224 RIVNVDLKFPPFLSDGSK--------------------------------------DLIS 245
Query: 368 GLLRYDPAERLKAREALRHPFFTRDVRR 395
LLRY P +RL + + HP+ + RR
Sbjct: 246 KLLRYHPPQRLPLKGVMEHPWVKANSRR 273
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 114/328 (34%), Gaps = 109/328 (33%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM------IEIDVLQR----LARHD 149
+G+G FG V + + K ++A+K++ +E IEI R L ++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 150 IGGTRYRSFPI-------DLVRELGR--------------QLLESVAFMHELRLIHTDLK 188
R R + + +L +EL + +L +++ + HE ++IH D+K
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHSYVVS 247
PEN+L+ YK +K+ DFG S +
Sbjct: 142 PENLLM---------GYK------------------GELKIADFGWSVHAPSLRRRXMCG 174
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHH 307
T Y PE+I G + DLW G + E G F + + E H
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------------THR 222
Query: 308 MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ 367
++ D + + G++ DL+
Sbjct: 223 RIVNVDLKFPPFLSDGSK--------------------------------------DLIS 244
Query: 368 GLLRYDPAERLKAREALRHPFFTRDVRR 395
LLRY P +RL + + HP+ + RR
Sbjct: 245 KLLRYHPPQRLPLKGVMEHPWVKANSRR 272
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P ++ ++ +++ + ++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 176
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
+ +LID + +F V TR Y +PE + G ++ D+WS+G LV
Sbjct: 177 -------GVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 221
Query: 277 ELCSG 281
E+ G
Sbjct: 222 EMAVG 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P ++ ++ +++ + ++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 120 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 168
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
+ +LID + +F V TR Y +PE + G ++ D+WS+G LV
Sbjct: 169 -------GVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 213
Query: 277 ELCSG 281
E+ G
Sbjct: 214 EMAVG 218
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 43/154 (27%)
Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
D++ ++ +D+ P R +++ ++ +H + IH D+KP+N+LL
Sbjct: 155 DLVNLMSNYDV--------PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----- 201
Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPE 255
KS +KL DFG+ +++ V T Y +PE
Sbjct: 202 ----------------------DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 239
Query: 256 VILGLG----WNYPCDLWSVGCILVELCSGEALF 285
V+ G + CD WSVG L E+ G+ F
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 41/209 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDI---GGTRY 155
+G+G FGQ ++ E E++ +K ++R + + + E+ V++ L ++ G Y
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 156 RSFPIDLVRE-------------------------LGRQLLESVAFMHELRLIHTDLKPE 190
+ ++ + E + + +A++H + +IH DL
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSH 137
Query: 191 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS-SAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ + V V D+ L+R D K P+ ++K D + VV
Sbjct: 138 NCLVRENKNVVVADFG-LARLMVDE---KTQPEGLRSLKKPD-------RKKRYTVVGNP 186
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
++ APE+I G ++ D++S G +L E+
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 35/150 (23%)
Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
D++ ++ +D+ P R +++ ++ +H + IH D+KP+N+LL + +
Sbjct: 160 DLVNLMSNYDV--------PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH 211
Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG 259
+K+ D+ + +K+G + + V T Y +PEV+
Sbjct: 212 LKLADFGTCMKMNKEG-----MVRCDT------------------AVGTPDYISPEVLKS 248
Query: 260 LG----WNYPCDLWSVGCILVELCSGEALF 285
G + CD WSVG L E+ G+ F
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 35/150 (23%)
Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
D++ ++ +D+ P R +++ ++ +H + IH D+KP+N+LL + +
Sbjct: 160 DLVNLMSNYDV--------PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH 211
Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG 259
+K+ D+ + +K+G + + V T Y +PEV+
Sbjct: 212 LKLADFGTCMKMNKEG-----MVRCDT------------------AVGTPDYISPEVLKS 248
Query: 260 LG----WNYPCDLWSVGCILVELCSGEALF 285
G + CD WSVG L E+ G+ F
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 60/235 (25%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
PI L+R Q+ VA +H L++IH DLKP+NIL+ ++ +F +
Sbjct: 135 PISLLR----QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENL 183
Query: 219 KNLPKSSAI-KLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCI 274
+ L + K +D G F + + T +RAPE++ D++S+GC+
Sbjct: 184 RILISDFGLCKKLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV 242
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
+ S G P +KY R + G S
Sbjct: 243 FYYILSK--------------------GKHPF---------GDKYSRESNII---RGIFS 270
Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
D M+ + H + DL+ ++ +DP +R A + LRHP F
Sbjct: 271 LDEMKCL------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 60/235 (25%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
PI L+R Q+ VA +H L++IH DLKP+NIL+ ++ +F +
Sbjct: 135 PISLLR----QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENL 183
Query: 219 KNLPKSSAI-KLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCI 274
+ L + K +D G F ++ T +RAPE++ D++S+GC+
Sbjct: 184 RILISDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV 242
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
+ S G P +KY R + G S
Sbjct: 243 FYYILSK--------------------GKHPF---------GDKYSRESNII---RGIFS 270
Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
D M+ + H + DL+ ++ +DP +R A + LRHP F
Sbjct: 271 LDEMKCL------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 64/239 (26%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
PI L+R Q+ VA +H L++IH DLKP+NIL+ ++ +F +
Sbjct: 117 PISLLR----QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENL 165
Query: 219 KNLPKSSAI-KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-------WNYPCDLWS 270
+ L + K +D G ++F + + T +RAPE++ D++S
Sbjct: 166 RILISDFGLCKKLDSGQSSF-RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
+GC+ + S G P +KY R +
Sbjct: 225 MGCVFYYILSK--------------------GKHPF---------GDKYSRESNII---R 252
Query: 331 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
G S D M+ + H + DL+ ++ +DP +R A + LRHP F
Sbjct: 253 GIFSLDEMKCL------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R +++ + MH +++ DLKP NILL +V++ D + K P
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKP 347
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSG 281
+S V T Y APEV+ G+ ++ D +S+GC+L +L G
Sbjct: 348 HAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 282 EALFQTHEN 290
+ F+ H+
Sbjct: 388 HSPFRQHKT 396
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R +++ + MH +++ DLKP NILL +V++ D + K P
Sbjct: 293 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKP 346
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSG 281
+S V T Y APEV+ G+ ++ D +S+GC+L +L G
Sbjct: 347 HAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
Query: 282 EALFQTHEN 290
+ F+ H+
Sbjct: 387 HSPFRQHKT 395
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P ++ ++ +++ + ++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------- 151
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
+ +LID + +F V TR Y +PE + G ++ D+WS+G LV
Sbjct: 152 ---------SGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
E+ G
Sbjct: 195 EMAVG 199
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P ++ ++ +++ + ++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------- 151
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
+ +LID + +F V TR Y +PE + G ++ D+WS+G LV
Sbjct: 152 ---------SGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
E+ G
Sbjct: 195 EMAVG 199
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ N EA + E V+++L RH+
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQEAQVMKKL-RHEKLVQL 245
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 246 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 305
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L R +D Y IK
Sbjct: 306 DLRAANILVGENLVCKVADFG-LGRLIEDNEYTARQGAKFPIK----------------- 347
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 348 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P ++ ++ +++ + ++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------- 151
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
+ +LID + +F V TR Y +PE + G ++ D+WS+G LV
Sbjct: 152 ---------SGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
E+ G
Sbjct: 195 EMAVG 199
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R +++ + MH +++ DLKP NILL +V++ D + K P
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKP 347
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSG 281
+S V T Y APEV+ G+ ++ D +S+GC+L +L G
Sbjct: 348 HAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 282 EALFQTHEN 290
+ F+ H+
Sbjct: 388 HSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+R +++ + MH +++ DLKP NILL +V++ D + K P
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKP 347
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSG 281
+S V T Y APEV+ G+ ++ D +S+GC+L +L G
Sbjct: 348 HAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 282 EALFQTHEN 290
+ F+ H+
Sbjct: 388 HSPFRQHKT 396
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P ++ ++ +++ + ++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 149
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
+ +LID + +F V TR Y +PE + G ++ D+WS+G LV
Sbjct: 150 -------GVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
E+ G
Sbjct: 195 EMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P ++ ++ +++ + ++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 149
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
+ +LID + +F V TR Y +PE + G ++ D+WS+G LV
Sbjct: 150 -------GVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
E+ G
Sbjct: 195 EMAVG 199
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 108/314 (34%), Gaps = 112/314 (35%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
L H IGG T Y + DL+ L R
Sbjct: 81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
Q+ + +AF+ IH DL NILL K+ D+ L+R K+
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN- 197
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
D +YVV + APE I + + D+WS
Sbjct: 198 -------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 232
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
G L EL S LG P+ + D + K + G R+ P+
Sbjct: 233 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 271
Query: 331 GATSR--DSMRAVW 342
A + D M+ W
Sbjct: 272 HAPAEMYDIMKTCW 285
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 61/234 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA-----MIEIDVLQRLARH 148
++ LS++G G++G+V + E L A+K RS++ +R + E+ +++ +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 149 ----------DIGGTRY------------------RSFPIDLVRELGRQLLESVAFMHEL 180
+ GG Y S P V R L ++A +H
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
L+H D+KP NI L K+ D+ L ++L G+ +
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLL------------------VELGTAGAGEVQEG 218
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
D Y+ APE++ G + D++S+G ++E+ L E + L
Sbjct: 219 DPRYM-------APELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 102/267 (38%), Gaps = 67/267 (25%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
+GEG FG+V + C+D + E+VA+K ++ + R EI++L+ L I
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI--V 74
Query: 154 RYRSF-------PIDLVRE-----------------------LGRQLLESVAFMHELRLI 183
+Y+ + LV E +Q+ E +A++H I
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYI 134
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H L N+LL + VK+ D+ L+++ +G + + + D S F
Sbjct: 135 HRALAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF------ 180
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
+ APE + + Y D+WS G L EL L N ++G
Sbjct: 181 -------WYAPECLKECKFYYASDVWSFGVTLYEL-----LTYCDSNQSPHTKFTELIGH 228
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPD 330
M + R + RG RL PD
Sbjct: 229 TQGQMTV---LRLTELLERGERLPRPD 252
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 108/314 (34%), Gaps = 112/314 (35%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 39 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 98
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
L H IGG T Y + DL+ L R
Sbjct: 99 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 157
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
Q+ + +AF+ IH DL NILL K+ D+ L+R K+
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN- 215
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
D +YVV + APE I + + D+WS
Sbjct: 216 -------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 250
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
G L EL S LG P+ + D + K + G R+ P+
Sbjct: 251 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 289
Query: 331 GATSR--DSMRAVW 342
A + D M+ W
Sbjct: 290 HAPAEMYDIMKTCW 303
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 108/314 (34%), Gaps = 112/314 (35%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 37 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 96
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
L H IGG T Y + DL+ L R
Sbjct: 97 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 155
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
Q+ + +AF+ IH DL NILL K+ D+ L+R K+
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN- 213
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
D +YVV + APE I + + D+WS
Sbjct: 214 -------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 248
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
G L EL S LG P+ + D + K + G R+ P+
Sbjct: 249 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 287
Query: 331 GATSR--DSMRAVW 342
A + D M+ W
Sbjct: 288 HAPAEMYDIMKTCW 301
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 104/314 (33%), Gaps = 112/314 (35%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
L H IGG T Y + DL+ L R
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
Q+ + +AF+ IH DL NILL K+
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI------------- 209
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
DFG D +YVV + APE I + + D+WS
Sbjct: 210 --------------CDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
G L EL S LG P+ + D + K + G R+ P+
Sbjct: 256 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 294
Query: 331 GATSR--DSMRAVW 342
A + D M+ W
Sbjct: 295 HAPAEMYDIMKTCW 308
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + + ++ RQ + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-- 174
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCI 274
GS FE S + + APEVI N + D+++ G +
Sbjct: 175 ---------------GSHQFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIV 214
Query: 275 LVELCSGEALFQTHENLEHLAMM 297
L EL +G+ + N + + M
Sbjct: 215 LYELMTGQLPYSNINNRDQIIEM 237
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 108/314 (34%), Gaps = 112/314 (35%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
PR R+ +G G FG+VVE ++ VA+K+++ REA M E+ VL
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
L H IGG T Y + DL+ L R
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
Q+ + +AF+ IH DL NILL K+ D+ L+R K+
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN- 220
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
D +YVV + APE I + + D+WS
Sbjct: 221 -------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
G L EL S LG P+ + D + K + G R+ P+
Sbjct: 256 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 294
Query: 331 GATSR--DSMRAVW 342
A + D M+ W
Sbjct: 295 HAPAEMYDIMKTCW 308
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 124/344 (36%), Gaps = 103/344 (29%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
+ L +Y I +G G FG V C + K+ K V+ + EI +L +AR
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILN-IAR 59
Query: 148 HDIGGTRYRSFP--------------IDLVRELG---------------RQLLESVAFMH 178
H + SF +D+ + Q+ E++ F+H
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-TF 237
+ H D++PENI+ + +R +SS IK+I+FG
Sbjct: 120 SHNIGHFDIRPENII-------------YQTR------------RSSTIKIIEFGQARQL 154
Query: 238 EHQDHSYVVSTR-HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
+ D+ ++ T Y APEV + D+WS+G ++ L SG F N + +
Sbjct: 155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ---I 211
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
+E ++ A + + A S+ A
Sbjct: 212 IENIM---------------------NAEYTFDEEAFKEISIEA---------------- 234
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 400
+D + LL + R+ A EAL+HP+ + + R + V
Sbjct: 235 ------MDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS--------- 186
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 187 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 234 QLPYSNINNRDQIIFM 249
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 63/252 (25%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
+GE+ +R+L G G FG+V C +L A K + + + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRL-------------ARHDI---------GGTRYRSFPIDLVRE---------LGRQL 170
L ++ + D+ G RY + +D Q+
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
+ + +H+ +I+ DLKPEN+LL V++ D L+ K G
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG--------------- 342
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-E 289
+ + Y T + APE++LG +++ D +++G L E+ + F+ E
Sbjct: 343 -------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Query: 290 NLEHLAMMERVL 301
+E+ + +RVL
Sbjct: 395 KVENKELKQRVL 406
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 102/267 (38%), Gaps = 67/267 (25%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
+GEG FG+V + C+D + E+VA+K ++ + R EI++L+ L I
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI--V 73
Query: 154 RYRSF-------PIDLVRE-----------------------LGRQLLESVAFMHELRLI 183
+Y+ + LV E +Q+ E +A++H I
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYI 133
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H L N+LL + VK+ D+ L+++ +G + + + D S F
Sbjct: 134 HRALAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF------ 179
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
+ APE + + Y D+WS G L EL L N ++G
Sbjct: 180 -------WYAPECLKECKFYYASDVWSFGVTLYEL-----LTYCDSNQSPHTKFTELIGH 227
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPD 330
M + R + RG RL PD
Sbjct: 228 TQGQMTV---LRLTELLERGERLPRPD 251
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + + ++ RQ + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-- 174
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCI 274
GS FE S + + APEVI N + D+++ G +
Sbjct: 175 ---------------GSHQFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIV 214
Query: 275 LVELCSGEALFQTHENLEHLAMM 297
L EL +G+ + N + + M
Sbjct: 215 LYELMTGQLPYSNINNRDQIIEM 237
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 12 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH +
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D Y IK
Sbjct: 131 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 171
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 172 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 221
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 222 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 259
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 128 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS--------- 178
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 179 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 226 QLPYSNINNRDQIIFM 241
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 63/252 (25%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
+GE+ +R+L G G FG+V C +L A K + + + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRL-------------ARHDI---------GGTRYRSFPIDLVRE---------LGRQL 170
L ++ + D+ G RY + +D Q+
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
+ + +H+ +I+ DLKPEN+LL V++ D L+ K G
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG--------------- 342
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-E 289
+ + Y T + APE++LG +++ D +++G L E+ + F+ E
Sbjct: 343 -------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Query: 290 NLEHLAMMERVL 301
+E+ + +RVL
Sbjct: 395 KVENKELKQRVL 406
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 63/252 (25%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
+GE+ +R+L G G FG+V C +L A K + + + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRL-------------ARHDI---------GGTRYRSFPIDLVRE---------LGRQL 170
L ++ + D+ G RY + +D Q+
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
+ + +H+ +I+ DLKPEN+LL V++ D L+ K G
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG--------------- 342
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-E 289
+ + Y T + APE++LG +++ D +++G L E+ + F+ E
Sbjct: 343 -------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Query: 290 NLEHLAMMERVL 301
+E+ + +RVL
Sbjct: 395 KVENKELKQRVL 406
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 63/252 (25%)
Query: 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
+GE+ +R+L G G FG+V C +L A K + + + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRL-------------ARHDI---------GGTRYRSFPIDLVRE---------LGRQL 170
L ++ + D+ G RY + +D Q+
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
+ + +H+ +I+ DLKPEN+LL V++ D L+ K G
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG--------------- 342
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-E 289
+ + Y T + APE++LG +++ D +++G L E+ + F+ E
Sbjct: 343 -------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Query: 290 NLEHLAMMERVL 301
+E+ + +RVL
Sbjct: 395 KVENKELKQRVL 406
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 156 RSFPIDLVRELGRQLLESVAFMHE---LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 212
+ P D++ Q+ + ++H+ + +IH DLK NIL++ +
Sbjct: 100 KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL--------------QKV 145
Query: 213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRH-YRAPEVILGLGWNYPCDLWSV 271
++G + +K+ DFG H+ + + + APEVI ++ D+WS
Sbjct: 146 ENGDLSNKI-----LKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSY 200
Query: 272 GCILVELCSGEALFQTHENL--EHLAMMERVLGPLP 305
G +L EL +GE F+ + L + M ++ P+P
Sbjct: 201 GVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 124 IVRSINKYR-EAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
IVR I + EA M+ +++ H + P+ V EL Q+ + ++ E
Sbjct: 72 IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H DL N+LLV+ Y K+ D+ D SY+ SA K
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY---TARSAGKW------------- 175
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE I ++ D+WS G + E S G+ ++ + E +A +E+
Sbjct: 176 -----PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 17/232 (7%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG----- 151
L +MG GT GQV + + ++A+K +R E I +D+ L HD
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 152 -GTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 210
GT + + + EL E + + + L + +V A Y + + R
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 211 SSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQDHSYVVSTRHYRAPEVI-----LGLGWN 263
K + L + IKL DFG + + + Y APE I ++
Sbjct: 150 DVKPSNIL--LDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD 207
Query: 264 YPCDLWSVGCILVELCSGEALFQT-HENLEHLAMMERVLGP-LPHHMVIRAD 313
D+WS+G LVEL +G+ ++ + E L + + P LP HM D
Sbjct: 208 IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 244
Query: 150 -----------IGGTRYRSFPIDLVR-------------ELGRQLLESVAFMHELRLIHT 185
+G + +D ++ ++ Q+ +A++ + +H
Sbjct: 245 YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 305 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 346
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 347 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
P ++ ++ +++ + ++ E +++H D+KP NIL+ S +K+ D+
Sbjct: 104 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 152
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
+ +LID + F V TR Y +PE + G ++ D+WS+G LV
Sbjct: 153 -------GVSGQLIDEMANEF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 197
Query: 277 ELCSG 281
E+ G
Sbjct: 198 EMAVG 202
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 104/259 (40%), Gaps = 77/259 (29%)
Query: 66 PRTGSPPWRPDDKDGHYVFAIG--------ENLTPRYRILSKMGEGTFGQVVECFDNEKK 117
P+T S P P D D +IG ++L P + ++G G +G V +
Sbjct: 23 PQTSSTP--PRDLDSKACISIGNQNFEVKADDLEP----IMELGRGAYGVVEKMRHVPSG 76
Query: 118 ELVAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTRY-------------------- 155
+++A+K +R+ +E ++++D+ R T Y
Sbjct: 77 QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSL 136
Query: 156 -----------RSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVP 203
++ P D++ ++ +++++ +H +L +IH D+KP N+L+ + VK+
Sbjct: 137 DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMC 196
Query: 204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI----LG 259
D+ Y + S K ID G + Y APE I
Sbjct: 197 DFGI-------SGYLVD----SVAKTIDAG--------------CKPYMAPERINPELNQ 231
Query: 260 LGWNYPCDLWSVGCILVEL 278
G++ D+WS+G ++EL
Sbjct: 232 KGYSVKSDIWSLGITMIEL 250
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 327
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 387
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 388 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 429
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 430 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 90/239 (37%), Gaps = 64/239 (26%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
PI L+R Q+ VA +H L++IH DLKP+NIL+ ++ +F +
Sbjct: 117 PISLLR----QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENL 165
Query: 219 KNLPKSSAI-KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-------WNYPCDLWS 270
+ L + K +D G F ++ T +RAPE++ D++S
Sbjct: 166 RILISDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
+GC+ + S G P +KY R +
Sbjct: 225 MGCVFYYILSK--------------------GKHPF---------GDKYSRESNII---R 252
Query: 331 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
G S D M+ + H + DL+ ++ +DP +R A + LRHP F
Sbjct: 253 GIFSLDEMKCL------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 471 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-- 528
Query: 223 KSSAIKLIDFGSTTFEHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS- 280
Q H + V + APE I ++ D+WS G ++ E S
Sbjct: 529 -----------------QTHGKWPVK---WYAPECINYYKFSSKSDVWSFGVLMWEAFSY 568
Query: 281 GEALFQTHENLEHLAMMER 299
G+ ++ + E AM+E+
Sbjct: 569 GQKPYRGMKGSEVTAMLEK 587
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS--------- 158
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 159 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 206 QLPYSNINNRDQIIFM 221
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 135 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 185
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 186 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 233 QLPYSNINNRDQIIFM 248
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 80/232 (34%)
Query: 94 YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
Y++ S+ +G G G+V++ F+ +E A+K+++ K R + +D
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 78
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
V + L R + GG + ++F E+ + + E++ ++H + +
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
H D+KPEN+L S K P+ + +KL DFG TT E
Sbjct: 139 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTGEK 174
Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
D S CD+WS+G I+ L G F ++ L
Sbjct: 175 YDKS----------------------CDMWSLGVIMYILLCGYPPFYSNHGL 204
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 472 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-- 529
Query: 223 KSSAIKLIDFGSTTFEHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS- 280
Q H + V + APE I ++ D+WS G ++ E S
Sbjct: 530 -----------------QTHGKWPVK---WYAPECINYYKFSSKSDVWSFGVLMWEAFSY 569
Query: 281 GEALFQTHENLEHLAMMER 299
G+ ++ + E AM+E+
Sbjct: 570 GQKPYRGMKGSEVTAMLEK 588
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 186
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 187 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 234 QLPYSNINNRDQIIFM 249
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 25 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D IK
Sbjct: 144 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 184
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 185 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 234
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 235 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 272
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D IK
Sbjct: 141 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 181
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 182 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 231
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 232 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 269
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 244
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 305 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 346
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 347 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + + ++ RQ + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 105 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS-- 162
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCI 274
GS FE S + + APEVI N + D+++ G +
Sbjct: 163 ---------------GSHQFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIV 202
Query: 275 LVELCSGEALFQTHENLEHLAMM 297
L EL +G+ + N + + M
Sbjct: 203 LYELMTGQLPYSNINNRDQIIEM 225
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D IK
Sbjct: 135 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 175
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 225
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 226 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 23/108 (21%)
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
+ F+HE IH D+K NILL A K+ D+ S K F
Sbjct: 146 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FA 187
Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
T S +V T Y APE + G D++S G +L+E+ +G
Sbjct: 188 QTVMX----SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 24 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D IK
Sbjct: 143 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 183
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 184 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 233
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 234 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 244
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 305 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 346
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 347 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 79 YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 10 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 67
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 68 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 128 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 169
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 170 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 12 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 69
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 70 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 130 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 171
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 172 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 14 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 71
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 72 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 131
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 132 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 173
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 174 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 124 IVRSINKYR-EAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
IVR I + EA M+ +++ H + P+ V EL Q+ + ++ E
Sbjct: 398 IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
+H +L N+LLV+ Y K+ D+ D SY+ SA K
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT---ARSAGKW------------- 501
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE I ++ D+WS G + E S G+ ++ + E +A +E+
Sbjct: 502 -----PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 163
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 164 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 211 QLPYSNINNRDQIIFM 226
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 75
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 136 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 177
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 178 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 185
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
Q H + APE I ++ D+WS G ++ E S G
Sbjct: 186 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 282 EALFQTHENLEHLAMMER 299
+ ++ + E AM+E+
Sbjct: 228 QKPYRGMKGSEVTAMLEK 245
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 185
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
Q H + APE I ++ D+WS G ++ E S G
Sbjct: 186 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 282 EALFQTHENLEHLAMMER 299
+ ++ + E AM+E+
Sbjct: 228 QKPYRGMKGSEVTAMLEK 245
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 127 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 183
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
Q H + APE I ++ D+WS G ++ E S G
Sbjct: 184 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 225
Query: 282 EALFQTHENLEHLAMMER 299
+ ++ + E AM+E+
Sbjct: 226 QKPYRGMKGSEVTAMLEK 243
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 18 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D IK
Sbjct: 137 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 177
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 178 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 227
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 228 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 265
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 169
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
Q H + APE I ++ D+WS G ++ E S G
Sbjct: 170 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
Query: 282 EALFQTHENLEHLAMMER 299
+ ++ + E AM+E+
Sbjct: 212 QKPYRGMKGSEVTAMLEK 229
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 79 YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 163
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 164 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 211 QLPYSNINNRDQIIFM 226
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 119 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 175
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
Q H + APE I ++ D+WS G ++ E S G
Sbjct: 176 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 217
Query: 282 EALFQTHENLEHLAMMER 299
+ ++ + E AM+E+
Sbjct: 218 QKPYRGMKGSEVTAMLEK 235
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 110 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 160
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 161 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 208 QLPYSNINNRDQIIFM 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 163
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
Q H + APE I ++ D+WS G ++ E S G
Sbjct: 164 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 205
Query: 282 EALFQTHENLEHLAMMER 299
+ ++ + E AM+E+
Sbjct: 206 QKPYRGMKGSEVTAMLEK 223
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 158
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 159 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 206 QLPYSNINNRDQIIFM 221
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
++ RQ + + ++H +IH DLK NI L VK+ D+ + S+
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 158
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
GS FE S + + APEVI N + D+++ G +L EL +G
Sbjct: 159 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 282 EALFQTHENLEHLAMM 297
+ + N + + M
Sbjct: 206 QLPYSNINNRDQIIFM 221
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D IK
Sbjct: 135 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 175
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 225
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 226 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
+++ ++G G FG+V + N + VA+K ++ + +A + E +++++L +
Sbjct: 17 KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
T Y I+ + ++ Q+ E +AF+ E IH D
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L+ NIL+ K+ D+ L+R +D IK
Sbjct: 136 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 176
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
+ APE I + D+WS G +L E+ + G + N E + +ER
Sbjct: 177 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 226
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
+ ++R D E+ ++ RL W P+ + D +R+V
Sbjct: 227 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 264
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D +Y+K
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 165
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
Q H + APE I ++ D+WS G ++ E S G
Sbjct: 166 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 207
Query: 282 EALFQTHENLEHLAMMER 299
+ ++ + E AM+E+
Sbjct: 208 QKPYRGMKGSEVTAMLEK 225
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V++++ RH+
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKI-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 88/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL NIL+ KV D+ L+R +D Y IK
Sbjct: 139 DLAAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 79 YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D Y IK
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 58/220 (26%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 I---GGTRYRS-----------FP--------------IDLVR--ELGRQLLESVAFMHE 179
I G Y + P ID ++ + Q+ + + ++
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGSTTFE 238
R IH DL NIL+ + VK+ D+ +D +FK P S I
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI----------- 181
Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ APE + ++ D+WS G +L EL
Sbjct: 182 -----------FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 68/226 (30%)
Query: 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQR---------- 144
L ++G G +G V + +++A+K +RS K ++ ++++DV+ R
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 145 ---LARH-------DIGGTRYRSFPI-------DLVRE--LGRQLLESVAFMH----ELR 181
L R ++ T + F D++ E LG+ L +V ++ L+
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEH 239
+IH D+KP NIL L +S IKL DFG + +
Sbjct: 147 IIHRDIKPSNIL---------------------------LDRSGNIKLCDFGISGQLVDS 179
Query: 240 QDHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSG 281
+ R Y APE I G++ D+WS+G L EL +G
Sbjct: 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 34/186 (18%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I+ + ++ Q+ E +AF+ E IH DL+ NIL+ K+ D+ L+R +D
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-LARLIEDAEXTA 166
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
IK + APE I + D+WS G +L E+
Sbjct: 167 REGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 280 S-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSR 335
+ G + N E + +ER + ++R D E+ ++ RL W P+ +
Sbjct: 205 THGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTF 257
Query: 336 DSMRAV 341
D +R+V
Sbjct: 258 DYLRSV 263
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 51/226 (22%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
++R+ K+G G+FG++ + + E VAIK+ K+ + ++ + R+ + G
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ--LLYESKIYRILQGGTGI 65
Query: 153 TRYRSFPID-----------------------------LVRELGRQLLESVAFMHELRLI 183
R F ++ V L Q++ V F+H +
Sbjct: 66 PNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 125
Query: 184 HTDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
H D+KP+N L+ A V + D+ L++ +D S +++P ++
Sbjct: 126 HRDIKPDNFLMGLGRRANQVYIIDFG-LAKKYRDTSTHQHIP----------------YR 168
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
++ + T Y + LG+ + DL S+G +L+ G +Q
Sbjct: 169 ENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 23/108 (21%)
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
+ F+HE IH D+K NILL A K+ D+ S K F
Sbjct: 146 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FA 187
Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
T + +V T Y APE + G D++S G +L+E+ +G
Sbjct: 188 QTVMXXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 30/111 (27%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
++L +++++H + L++ DLKPENI+L + +K
Sbjct: 190 EILPALSYLHSIGLVYNDLKPENIMLTEEQ----------------------------LK 221
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
LID G+ + Y+ T ++APE++ G D+++VG L L
Sbjct: 222 LIDLGAVS-RINSFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 47/224 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK------------IVRSINKYREAAM---- 136
RYR+ K+G G+FG + D E VAIK I I K + +
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT 67
Query: 137 ---------IEIDVLQRL--ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
+ V++ L + D+ R F + V L Q++ + ++H IH
Sbjct: 68 IRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR 127
Query: 186 DLKPENILL---VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
D+KP+N L+ V + D+ L++ +D +++P ++++
Sbjct: 128 DVKPDNFLMGLGKKGNLVYIIDFG-LAKKYRDARTHQHIP----------------YREN 170
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
+ T Y + LG+ + DL S+G +L+ G +Q
Sbjct: 171 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 47/224 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIK------------IVRSINKYREAAM---- 136
RYR+ K+G G+FG + D E VAIK I I K + +
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT 69
Query: 137 ---------IEIDVLQRL--ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
+ V++ L + D+ R F + V L Q++ + ++H IH
Sbjct: 70 IRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR 129
Query: 186 DLKPENILL---VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
D+KP+N L+ V + D+ L++ +D +++P ++++
Sbjct: 130 DVKPDNFLMGLGKKGNLVYIIDFG-LAKKYRDARTHQHIP----------------YREN 172
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
+ T Y + LG+ + DL S+G +L+ G +Q
Sbjct: 173 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 74 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 126
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD Y S + A
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYEL 211
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 154 RYRSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
+ R F +DL + QL ++A++ R +H D+ N+L+ S + VK+ D+ LSR
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-LSRY 540
Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 271
+D +Y+K IK + APE I + D+W
Sbjct: 541 MEDSTYYKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMF 578
Query: 272 G-CILVELCSGEALFQTHENLEHLAMME 298
G C+ L G FQ +N + + +E
Sbjct: 579 GVCMWEILMHGVKPFQGVKNNDVIGRIE 606
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 75
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D + IK
Sbjct: 136 DLRAANILVGENLVCKVADFG-LARLIEDNEWTARQGAKFPIK----------------- 177
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 178 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 154 RYRSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
+ R F +DL + QL ++A++ R +H D+ N+L+ + + VK+ D+ LSR
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG-LSRY 540
Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 271
+D +Y+K IK + APE I + D+W
Sbjct: 541 MEDSTYYKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMF 578
Query: 272 G-CILVELCSGEALFQTHENLEHLAMME 298
G C+ L G FQ +N + + +E
Sbjct: 579 GVCMWEILMHGVKPFQGVKNNDVIGRIE 606
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 81/230 (35%), Gaps = 71/230 (30%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARH---- 148
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 149 DIGGTRYRSFPIDLVRE--------------------------------------LGRQL 170
++ G P+ ++ E Q+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
+ +AF+ IH D+ N+LL + K+ D+ D +Y +K
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-- 231
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE I + D+WS G +L E+ S
Sbjct: 232 --------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 81/230 (35%), Gaps = 71/230 (30%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARH---- 148
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 149 DIGGTRYRSFPIDLVRE--------------------------------------LGRQL 170
++ G P+ ++ E Q+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
+ +AF+ IH D+ N+LL + K+ D+ D +Y +K
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-- 231
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE I + D+WS G +L E+ S
Sbjct: 232 --------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 83/240 (34%), Gaps = 74/240 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 146 ARH-----------DIGG-------------------------TRYRSFPIDLVREL--- 166
H GG Y+ P DL ++
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 167 ------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
Q+ + + F+ + IH DL NILL VK+ D+ KD Y +
Sbjct: 150 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 210 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 113/314 (35%), Gaps = 92/314 (29%)
Query: 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYR 132
K GH+ GE + +L ++G+G+FG V E E + VA+K V R
Sbjct: 2 KKGHHHHHHGEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 61
Query: 133 E--AAMIEIDVLQRLARHDIG---GTRYRSFPIDLVREL--------------------- 166
E + E V++ H + G + P +V EL
Sbjct: 62 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 121
Query: 167 GR-------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
GR ++ + +A+++ + +H DL N ++ VK+ D+ ++R
Sbjct: 122 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTRDIY 180
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
+ Y++ K ++ R + APE + + D+WS G
Sbjct: 181 ETDYYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGV 219
Query: 274 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 332
+L E+ S E +Q N E+VL K+ G LD PD
Sbjct: 220 VLWEITSLAEQPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNC 256
Query: 333 TSR--DSMRAVWKL 344
R D MR W+
Sbjct: 257 PERVTDLMRMCWQF 270
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 154 RYRSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
+ R F +DL + QL ++A++ R +H D+ N+L+ + + VK+ D+ LSR
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG-LSRY 160
Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 271
+D +Y+K IK + APE I + D+W
Sbjct: 161 MEDSTYYKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMF 198
Query: 272 G-CILVELCSGEALFQTHENLEHLAMME 298
G C+ L G FQ +N + + +E
Sbjct: 199 GVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 88/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 11 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 68
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 69 YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 128
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D IK
Sbjct: 129 DLRAANILVGENLVCKVADFG-LARLIEDNEXTARQGAKFPIK----------------- 170
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 171 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 41/152 (26%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q++ ++ H ++H D+K ENIL+ +L + A K
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILI-------------------------DLRRGCA-K 180
Query: 229 LIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQ 286
LIDFGS H + ++ TR Y PE I ++ P +WS+G +L ++ G+ F+
Sbjct: 181 LIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
Query: 287 -------------THENLEHLAMMERVLGPLP 305
H + + A++ R L P P
Sbjct: 241 RDQEILEAELHFPAHVSPDCCALIRRCLAPKP 272
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 107/283 (37%), Gaps = 67/283 (23%)
Query: 100 MGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDI--- 150
+GEG FG+V C +D E E VA+K ++ + A + EI++L+ L +I
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 151 --------------------GGTRYRSFP-----IDLVREL--GRQLLESVAFMHELRLI 183
G+ P I+L ++L Q+ + + ++ + +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H DL N+L+ S VK+ D+ + AI+ T + +D
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGL----------------TKAIETDKEXXTVKDDRD-- 190
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
S + APE ++ + D+WS G L EL L + +A+ +++GP
Sbjct: 191 ---SPVFWYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSDSSPMALFLKMIGP 242
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 344
M + R + G RL P MR W+
Sbjct: 243 THGQMTV---TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 282
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 92/236 (38%), Gaps = 57/236 (24%)
Query: 95 RILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
+++ ++G G FG+V + ++ K VAIK ++ E+ + E ++++L +HD
Sbjct: 12 QLIKRLGNGQFGEVWMGTWNGNTK--VAIKTLKPGTMSPESFLEEAQIMKKL-KHDKLVQ 68
Query: 154 RYRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIH 184
Y PI +V E + Q+ +A++ + IH
Sbjct: 69 LYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIH 128
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DL+ NIL+ + K+ D+ L+R +D IK
Sbjct: 129 RDLRSANILVGNGLICKIADFG-LARLIEDNEXTARQGAKFPIK---------------- 171
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 172 ------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 83/240 (34%), Gaps = 74/240 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARH-----------DIGG-------------------------TRYRSFPIDLVREL--- 166
H GG Y+ P DL ++
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 167 ------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
Q+ + + F+ + IH DL NILL VK+ D+ KD Y +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 208 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 83/240 (34%), Gaps = 74/240 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH-----------DIGG-------------------------TRYRSFPIDLVREL--- 166
H GG Y+ P DL ++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 167 ------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
Q+ + + F+ + IH DL NILL VK+ D+ KD Y +
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 199 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
+ F+HE IH D+K NILL A K+ D+ L+R+S+ +
Sbjct: 137 INFLHENHHIHRDIKSANILLDEAFTAKISDFG-LARASEKFA----------------- 178
Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
+ S +V T Y APE + G D++S G +L+E+ +G
Sbjct: 179 ----QXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 65/239 (27%)
Query: 74 RPDDKDGHYVFAIGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY 131
+P DKD + PR +++ ++G G FG+V + N + VA+K ++
Sbjct: 1 KPWDKDAWEI--------PRESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMS 51
Query: 132 REAAMIEIDVLQRLARHD----IGGTRYRSFPIDLVRE---------------------- 165
+A + E ++++ L +HD + R PI ++ E
Sbjct: 52 VQAFLEEANLMKTL-QHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP 110
Query: 166 ----LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
Q+ E +A++ IH DL+ N+L+ + K+ D+ L+R +D Y
Sbjct: 111 KLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG-LARVIEDNEYTARE 169
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
IK + APE I + D+WS G +L E+ +
Sbjct: 170 GAKFPIK----------------------WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 107/283 (37%), Gaps = 67/283 (23%)
Query: 100 MGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDI--- 150
+GEG FG+V C +D E E VA+K ++ + A + EI++L+ L +I
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 151 --------------------GGTRYRSFP-----IDLVREL--GRQLLESVAFMHELRLI 183
G+ P I+L ++L Q+ + + ++ + +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H DL N+L+ S VK+ D+ + AI+ T + +D
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGL----------------TKAIETDKEXXTVKDDRD-- 178
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
S + APE ++ + D+WS G L EL L + +A+ +++GP
Sbjct: 179 ---SPVFWYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSDSSPMALFLKMIGP 230
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 344
M + R + G RL P MR W+
Sbjct: 231 THGQMTV---TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 270
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 90/238 (37%), Gaps = 62/238 (26%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREA----------- 134
+ IL +G G F +V + ++ A+KI+ ++ +RE
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 135 ------AMIEIDVLQRLARHDIGG---TRYRSF----PIDLVRELGRQLLESVAFMHELR 181
A + + L + + +GG T F P ++ R +++ ++ +H L
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
+H D+KP+NILL ++++ D+ GS K + L+
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADF---------GSCLKLRADGTVRSLV----------- 222
Query: 242 HSYVVSTRHYRAPEVILGLGWNY-------PCDLWSVGCILVELCSGEALFQTHENLE 292
V T Y +PE++ +G CD W++G E+ G+ F E
Sbjct: 223 ---AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 25/119 (21%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+++ ++ +H+L +I+ D+K ENILL S +V + D+ K +
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDF----------GLSKEFVADETER 216
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALF 285
DF T Y AP+++ G G + D WS+G ++ EL +G + F
Sbjct: 217 AYDFCGTI-------------EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 83/240 (34%), Gaps = 74/240 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 146 ARH-----------DIGG-------------------------TRYRSFPIDLVREL--- 166
H GG Y+ P DL ++
Sbjct: 125 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 167 ------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
Q+ + + F+ + IH DL NILL VK+ D+ KD Y +
Sbjct: 185 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 245 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 83/240 (34%), Gaps = 74/240 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH-----------DIGG-------------------------TRYRSFPIDLVREL--- 166
H GG Y+ P DL ++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 167 ------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
Q+ + + F+ + IH DL NILL VK+ D+ KD Y +
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 199 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 154 RYRSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
+ R + +DL + QL ++A++ R +H D+ N+L+ S + VK+ D+ LSR
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-LSRY 165
Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 271
+D +Y+K IK + APE I + D+W
Sbjct: 166 MEDSTYYKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMF 203
Query: 272 G-CILVELCSGEALFQTHENLEHLAMME 298
G C+ L G FQ +N + + +E
Sbjct: 204 GVCMWEILMHGVKPFQGVKNNDVIGRIE 231
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 81/232 (34%), Gaps = 73/232 (31%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARH---- 148
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 149 DIGGTRYRSFPIDLVRE----------------------------------------LGR 168
++ G P+ ++ E
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + +AF+ IH D+ N+LL + K+ D+ D +Y +K
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 233
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE I + D+WS G +L E+ S
Sbjct: 234 ----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 154 RYRSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
+ R + +DL + QL ++A++ R +H D+ N+L+ S + VK+ D+ LSR
Sbjct: 105 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-LSRY 163
Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 271
+D +Y+K IK + APE I + D+W
Sbjct: 164 MEDSTYYKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMF 201
Query: 272 G-CILVELCSGEALFQTHENLEHLAMME 298
G C+ L G FQ +N + + +E
Sbjct: 202 GVCMWEILMHGVKPFQGVKNNDVIGRIE 229
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 26/146 (17%)
Query: 156 RSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
R + +DL + QL ++A++ R +H D+ N+L+ S + VK+ D+ LSR +
Sbjct: 132 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYME 190
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG- 272
D +Y+K IK + APE I + D+W G
Sbjct: 191 DSTYYKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMFGV 228
Query: 273 CILVELCSGEALFQTHENLEHLAMME 298
C+ L G FQ +N + + +E
Sbjct: 229 CMWEILMHGVKPFQGVKNNDVIGRIE 254
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 154 RYRSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
+ R + +DL + QL ++A++ R +H D+ N+L+ S + VK+ D+ LSR
Sbjct: 104 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-LSRY 162
Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 271
+D +Y+K IK + APE I + D+W
Sbjct: 163 MEDSTYYKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMF 200
Query: 272 G-CILVELCSGEALFQTHENLEHLAMME 298
G C+ L G FQ +N + + +E
Sbjct: 201 GVCMWEILMHGVKPFQGVKNNDVIGRIE 228
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 91/242 (37%), Gaps = 59/242 (24%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +K+ VAIK ++ + R + E ++ + +
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 150 I---GGTRYRSFPIDLVRE-------------------------LGRQLLESVAFMHELR 181
I G S P+ ++ E + R + + ++ E+
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 182 LIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+H DL NIL+ S KV D+ +FL +S D +Y +L I+
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR---------- 186
Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM 297
+ APE I + D WS G ++ E+ S GE + N + + +
Sbjct: 187 ------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 234
Query: 298 ER 299
E+
Sbjct: 235 EQ 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 96/289 (33%), Gaps = 91/289 (31%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R + +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHD-----IGGTRYRSFPIDLVRELGR-------------------------------- 168
H +G P+ ++ E +
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 169 ----QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
Q+ + + F+ + IH DL NILL VK+ D+ KD Y +
Sbjct: 148 XYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
+K + APE I + D+WS G +L E+ S
Sbjct: 208 LPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS---- 241
Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT 333
LG P+ V + D + + G R+ PD T
Sbjct: 242 ----------------LGASPYPGV-KIDEEFXRRLKEGTRMRAPDYTT 273
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 85/239 (35%), Gaps = 80/239 (33%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDI-- 150
+G G FG+VVE F K++ V A+K+++S +EA M E+ ++ L +H+
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 151 --------GG-----TRYRSF------------------------PIDLVRELGR----- 168
GG T Y + P L +E GR
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 169 -------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
Q+ + +AF+ IH D+ N+LL + K+ D+ D +Y
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 218
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 219 NARLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 154 RYRSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
+ R + +DL + QL ++A++ R +H D+ N+L+ S + VK+ D+ LSR
Sbjct: 99 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-LSRY 157
Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTF 237
+D +Y+K IK + S F
Sbjct: 158 MEDSTYYKASKGKLPIKWMAPESINF 183
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 26/146 (17%)
Query: 156 RSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
R + +DL + QL ++A++ R +H D+ N+L+ S + VK+ D+ LSR +
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYME 162
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG- 272
D +Y+K IK + APE I + D+W G
Sbjct: 163 DSTYYKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMFGV 200
Query: 273 CILVELCSGEALFQTHENLEHLAMME 298
C+ L G FQ +N + + +E
Sbjct: 201 CMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 23/108 (21%)
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
+ F+HE IH D+K NILL A K+ D+ S K F
Sbjct: 140 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FA 181
Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
+ +V T Y APE + G D++S G +L+E+ +G
Sbjct: 182 QXVMXXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 26/146 (17%)
Query: 156 RSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
R + +DL + QL ++A++ R +H D+ N+L+ S + VK+ D+ LSR +
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-LSRYME 162
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG- 272
D +Y+K IK + APE I + D+W G
Sbjct: 163 DSTYYKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMFGV 200
Query: 273 CILVELCSGEALFQTHENLEHLAMME 298
C+ L G FQ +N + + +E
Sbjct: 201 CMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
+ EL Q+ + ++ E +H DL N+LLV+ Y K+ D+ D + +K
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK--- 169
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
Q H + APE I ++ D+WS G ++ E S G
Sbjct: 170 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
Query: 282 EALFQTHENLEHLAMMER 299
+ ++ + E AM+E+
Sbjct: 212 QKPYRGMKGSEVTAMLEK 229
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 54/210 (25%)
Query: 108 VVECFDNEKKELVAIKI------------------VRSINKYREAAMI------EID--- 140
V E D ++ +VA+K+ R+ + +E ++ EID
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQL 109
Query: 141 -VLQRLARH-DIGGTRYRSFPIDLVRELG--RQLLESVAFMHELRLIHTDLKPENILLVS 196
V RL D+ R P+ R + RQ+ ++ H H D+KPENIL+ +
Sbjct: 110 YVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA 169
Query: 197 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEV 256
++ + D+ S ++ + KL G+T V T +Y APE
Sbjct: 170 DDFAYLVDFGIASATTDE-------------KLTQLGNT----------VGTLYYXAPER 206
Query: 257 ILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
Y D++++ C+L E +G +Q
Sbjct: 207 FSESHATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 76/227 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
+L +++ + H ++IH D+KPEN+LL +K+ D+ + + +L + +
Sbjct: 131 ELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGW-------SVHAPSLRRKTMCG 183
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
+D Y PE+I G N DLW +G + EL G F++
Sbjct: 184 TLD-------------------YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESA 224
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
+ E +RR ++D L+ P
Sbjct: 225 SHNE--------------------------TYRRIVKVD-----------------LKFP 241
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
+ DL+ LLR++P+ERL + HP+ + RR
Sbjct: 242 ASVPTGAQ-------DLISKLLRHNPSERLPLAQVSAHPWVRANSRR 281
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 88/235 (37%), Gaps = 55/235 (23%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
R+ K+G+G FG+V N VAIK ++ EA + E V+++L RH+
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
Y PI +V E + Q+ +A++ + +H
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
DL+ NIL+ KV D+ L+R +D IK
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEXTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
+ APE L + D+WS G +L EL + G + N E L +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + ++++ ++RL+H DL N+L+ S +VK+ D+ +
Sbjct: 127 QIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGL-------------------AR 167
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+D T + H D V + A E IL + + D+WS G + EL +
Sbjct: 168 LLDIDETEY-HADGGKV--PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 81/236 (34%), Gaps = 70/236 (29%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R + +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHD-----IGGTRYRSFPIDLVRELGR-------------------------------- 168
H +G P+ ++ E +
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 169 ----QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
Q+ + + F+ + IH DL NILL VK+ D+ KD Y +
Sbjct: 148 CYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 208 LPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 88/234 (37%), Gaps = 59/234 (25%)
Query: 90 LTPRYRILSKMGEGTFGQVVECFDNE-------------------------KKELVAIKI 124
L +Y + +GEG++G+V E D+E KKE+ ++
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 125 VRSINKYREAAMIEIDVLQRL----------ARHDIGGTRYRSFPIDLVRELGRQLLESV 174
+R N + ++ + Q++ + + + FP+ QL++ +
Sbjct: 63 LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGL 122
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
++H ++H D+KP N+LL + +K+ L + A+
Sbjct: 123 EYLHSQGIVHKDIKPGNLLLTTGGTLKI----------------SALGVAEALHPFAADD 166
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGW--NYPCDLWSVGCILVELCSGEALFQ 286
T Q + ++ PE+ GL + D+WS G L + +G F+
Sbjct: 167 TCRTSQ------GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
L DLL+G+L Y+PA+R R+ +H +F +
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 108/299 (36%), Gaps = 92/299 (30%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIG---GTRYRSFPIDLVREL---------------------GR------------- 168
H + G + P +V EL GR
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
++ + +A+++ + +H DL N ++ VK+ D+ ++R + +Y++ K
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTRDIYETAYYRKGGKG---- 192
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQT 287
++ R + APE + + D+WS G +L E+ S E +Q
Sbjct: 193 ----------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG 235
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 344
N E+VL K+ G LD PD R D MR W+
Sbjct: 236 LSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRMCWQF 271
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 47/224 (20%)
Query: 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKI-------------------------VRS 127
+YR+ K+G G+FG + + E VAIK+ + S
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPS 69
Query: 128 INKYREAAMIEIDVLQRL--ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
I + V++ L + D+ R F + V L Q++ + ++H IH
Sbjct: 70 IKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR 129
Query: 186 DLKPENILL---VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
D+KP+N L+ V + D+ L++ +D +++P ++++
Sbjct: 130 DVKPDNFLMGLGKKGNLVYIIDFG-LAKKYRDARTHQHIP----------------YREN 172
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
+ T Y + LG+ + DL S+G +L+ G +Q
Sbjct: 173 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 145 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 182
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 183 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 242 CPEKVYELMRA 252
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 89/240 (37%), Gaps = 59/240 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 143
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 144 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 181
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 182 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 240
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 145 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 182
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 183 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 242 CPEKVYELMRA 252
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 89/240 (37%), Gaps = 59/240 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 145 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 182
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 183 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ +++A++ + +H D+ NIL+ S E VK+ D+ LSR +D Y+K IK
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG-LSRYIEDEDYYKASVTRLPIK 191
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
+ S F R A +V W + +W + L G+ F
Sbjct: 192 WMSPESINFR----------RFTTASDV-----WMFAVCMWEI------LSFGKQPFFWL 230
Query: 289 ENLEHLAMMER 299
EN + + ++E+
Sbjct: 231 ENKDVIGVLEK 241
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 140 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 177
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 178 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 237 CPEKVYELMRA 247
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 38/185 (20%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----I 150
+++ K+G G FG+V + N + VA+K ++ +A + E ++++ L +HD +
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRL 72
Query: 151 GGTRYRSFPIDLVREL--------------------------GRQLLESVAFMHELRLIH 184
+ PI ++ E Q+ E +A++ IH
Sbjct: 73 YAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 132
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF----KNLP-KSSAIKLIDFGSTTFEH 239
DL+ N+L+ + K+ D+ L+R +D Y P K +A + I+FG T +
Sbjct: 133 RDLRAANVLVSESLMCKIADFG-LARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 240 QDHSY 244
S+
Sbjct: 192 NVWSF 196
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 140 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 177
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 178 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 237 CPEKVYELMRA 247
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 140 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 177
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 178 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 237 CPEKVYELMRA 247
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 96/251 (38%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR + G T H + +
Sbjct: 145 RNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFPIK-- 182
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 183 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 242 CPEKVYELMRA 252
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ +++A++ + +H D+ NIL+ S E VK+ D+ LSR +D Y+K IK
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG-LSRYIEDEDYYKASVTRLPIK 179
Query: 229 LIDFGSTTF 237
+ S F
Sbjct: 180 WMSPESINF 188
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 92/242 (38%), Gaps = 59/242 (24%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +++ VAIK ++S K R + E ++ + +
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 150 I---GGTRYRSFPIDLVRE-------------------------LGRQLLESVAFMHELR 181
+ G +S P+ ++ E + R + + ++ ++
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 155
Query: 182 LIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+H DL NIL+ S KV D+ +FL + D +Y L I+
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR---------- 205
Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM 297
+ APE I + D+WS G ++ E+ S GE + N + + +
Sbjct: 206 ------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
Query: 298 ER 299
E+
Sbjct: 254 EQ 255
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ +++A++ + +H D+ NIL+ S E VK+ D+ LSR +D Y+K IK
Sbjct: 117 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG-LSRYIEDEDYYKASVTRLPIK 175
Query: 229 LIDFGSTTF 237
+ S F
Sbjct: 176 WMSPESINF 184
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 142 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 179
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 180 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 239 CPEKVYELMRA 249
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 30/128 (23%)
Query: 156 RSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
++ P D++ ++ +++++ +H +L +IH D+KP N+L+ + VK+ D+
Sbjct: 104 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI------S 157
Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI----LGLGWNYPCDLWS 270
G ++ K ID G + Y APE I G++ D+WS
Sbjct: 158 GYLVDDVAKD-----IDAG--------------CKPYMAPERINPELNQKGYSVKSDIWS 198
Query: 271 VGCILVEL 278
+G ++EL
Sbjct: 199 LGITMIEL 206
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 25/214 (11%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ +S++G+G FG V C + LVA+K ++ S + EI +L+ L H
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HS 71
Query: 150 IGGTRYRSFPIDLVRELGRQLLE---SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 206
+YR R+ R ++E S L+ L +LL S++ K +Y
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 131
Query: 207 FLSRS-SKDGSYFKNLPKSSA-IKLIDFGSTTFEHQDHSYVV------STRHYRAPEVIL 258
R +D + L +S A +K+ DFG D Y V S + APE +
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 259 GLGWNYPCDLWSVGCILVEL-------CSGEALF 285
++ D+WS G +L EL CS A F
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 225
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 142 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 179
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 180 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 239 CPEKVYELMRA 249
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 152
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 153 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 190
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 191 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 249
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 250 CPEKVYELMRA 260
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 145 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 182
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 183 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 242 CPEKVYELMRA 252
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 140 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 177
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 178 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 237 CPEKVYELMRA 247
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 25/214 (11%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ +S++G+G FG V C + LVA+K ++ S + EI +L+ L H
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HS 83
Query: 150 IGGTRYRSFPIDLVRELGRQLLE---SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 206
+YR R+ R ++E S L+ L +LL S++ K +Y
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 143
Query: 207 FLSRS-SKDGSYFKNLPKSSA-IKLIDFGSTTFEHQDHSYVV------STRHYRAPEVIL 258
R +D + L +S A +K+ DFG D Y V S + APE +
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 259 GLGWNYPCDLWSVGCILVEL-------CSGEALF 285
++ D+WS G +L EL CS A F
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 237
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 140 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 177
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 178 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 237 CPEKVYELMRA 247
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 25/214 (11%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ +S++G+G FG V C + LVA+K ++ S + EI +L+ L H
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HS 70
Query: 150 IGGTRYRSFPIDLVRELGRQLLE---SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 206
+YR R+ R ++E S L+ L +LL S++ K +Y
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 207 FLSRS-SKDGSYFKNLPKSSA-IKLIDFGSTTFEHQDHSYVV------STRHYRAPEVIL 258
R +D + L +S A +K+ DFG D Y V S + APE +
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 259 GLGWNYPCDLWSVGCILVEL-------CSGEALF 285
++ D+WS G +L EL CS A F
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 224
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 140 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 177
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 178 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 237 CPEKVYELMRA 247
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + E+ + + E++ ++ + +H DL N L+ VKV D+ LSR D Y
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEY 175
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
++ ++ + PEV++ ++ D+W+ G ++ E
Sbjct: 176 TSSVGSKFPVR----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWE 213
Query: 278 LCSGEAL----FQTHENLEHLAMMERVLGP 303
+ S + F E EH+A R+ P
Sbjct: 214 IYSLGKMPYERFTNSETAEHIAQGLRLYRP 243
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + E+ + + E++ ++ + +H DL N L+ VKV D+ LSR D Y
Sbjct: 108 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEY 166
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
++ ++ + PEV++ ++ D+W+ G ++ E
Sbjct: 167 TSSVGSKFPVR----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWE 204
Query: 278 LCSGEAL----FQTHENLEHLAMMERVLGP 303
+ S + F E EH+A R+ P
Sbjct: 205 IYSLGKMPYERFTNSETAEHIAQGLRLYRP 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 116/312 (37%), Gaps = 102/312 (32%)
Query: 88 ENLTPRYRILSKMGEGTFGQVVECFD--NEKKELVAIKIVRSINKYREAAMIEIDVLQRL 145
E + IL K+ ++VE D NE + ++V + ++E+ L+ L
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVN------QGPVMEVPTLKPL 134
Query: 146 ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 205
+ D R + L++ + ++H ++IH D+KP N+L+
Sbjct: 135 SE-------------DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV----------- 170
Query: 206 KFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDH--SYVVSTRHYRAPEVIL---G 259
+DG IK+ DFG S F+ D S V T + APE +
Sbjct: 171 ------GEDGH----------IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRK 214
Query: 260 LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKY 319
+ D+W++G L G+ F M ER+ M + + +++
Sbjct: 215 IFSGKALDVWAMGVTLYCFVFGQCPF----------MDERI-------MCLHSKIKSQA- 256
Query: 320 FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK 379
L++PD P++ A DL DL+ +L +P R+
Sbjct: 257 ------LEFPDQ----------------PDI--------AEDLKDLITRMLDKNPESRIV 286
Query: 380 AREALRHPFFTR 391
E HP+ TR
Sbjct: 287 VPEIKLHPWVTR 298
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 96/251 (38%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 140
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR + G T H + +
Sbjct: 141 RNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFPIK-- 178
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 179 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 237
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 238 CPEKVYELMRA 248
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + E+ + + E++ ++ + +H DL N L+ VKV D+ LSR D Y
Sbjct: 101 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEY 159
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
++ ++ + PEV++ ++ D+W+ G ++ E
Sbjct: 160 TSSVGSKFPVR----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWE 197
Query: 278 LCSGEAL----FQTHENLEHLAMMERVLGP 303
+ S + F E EH+A R+ P
Sbjct: 198 IYSLGKMPYERFTNSETAEHIAQGLRLYRP 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 107/299 (35%), Gaps = 92/299 (30%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIG---GTRYRSFPIDLVREL---------------------GR------------- 168
H + G + P +V EL GR
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
++ + +A+++ + +H DL N ++ VK+ D+ ++R + Y++ K
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTRDIYETDYYRKGGKG---- 192
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQT 287
++ R + APE + + D+WS G +L E+ S E +Q
Sbjct: 193 ----------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG 235
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 344
N E+VL K+ G LD PD R D MR W+
Sbjct: 236 LSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRMCWQF 271
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + F+ + IH DL NILL VK+ D+ KD Y + +K
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE I + D+WS G +L E+ S
Sbjct: 266 ----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + E+ + + E++ ++ + +H DL N L+ VKV D+ LSR D Y
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEY 160
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
++ ++ + PEV++ ++ D+W+ G ++ E
Sbjct: 161 TSSVGSKFPVR----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWE 198
Query: 278 LCSGEAL----FQTHENLEHLAMMERVLGP 303
+ S + F E EH+A R+ P
Sbjct: 199 IYSLGKMPYERFTNSETAEHIAQGLRLYRP 228
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 79 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 131
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 91 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 143
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + F+ + IH DL NILL VK+ D+ KD Y + +K
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE I + D+WS G +L E+ S
Sbjct: 268 ----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 58/220 (26%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 I---GGTRYRS-----------FPIDLVRE----------------LGRQLLESVAFMHE 179
I G Y + P +RE Q+ + + ++
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGSTTFE 238
R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----------- 184
Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ APE + ++ D+WS G +L EL
Sbjct: 185 -----------FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + E+ + + E++ ++ + +H DL N L+ VKV D+ LSR D Y
Sbjct: 97 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEY 155
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
++ ++ + PEV++ ++ D+W+ G ++ E
Sbjct: 156 TSSVGSKFPVR----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWE 193
Query: 278 LCSGEAL----FQTHENLEHLAMMERVLGP 303
+ S + F E EH+A R+ P
Sbjct: 194 IYSLGKMPYERFTNSETAEHIAQGLRLYRP 223
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 78 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 130
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYEL 215
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ E++L+H DL NIL+ +K+ D+ ++ SY K +K
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK 217
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ S DH Y + D+WS G +L E+ +
Sbjct: 218 WMAIESLF----DHIYTTQS------------------DVWSFGVLLWEIVT 247
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 76 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 128
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 80 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 132
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 91 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 143
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 77 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 129
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + F+ + IH DL NILL VK+ D+ KD Y + +K
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE I + D+WS G +L E+ S
Sbjct: 261 ----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + F+ + IH DL NILL VK+ D+ KD Y + +K
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 258
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE I + D+WS G +L E+ S
Sbjct: 259 ----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 73 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 125
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 104 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 156
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYEL 241
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 71 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 123
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 85/234 (36%), Gaps = 69/234 (29%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
PI L++ Q +A +H L ++H DLKP NIL +S + G
Sbjct: 120 PITLLQ----QTTSGLAHLHSLNIVHRDLKPHNIL--------------ISMPNAHGKIK 161
Query: 219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCIL 275
+ K + G +F + S V T + APE++ Y D++S GC+
Sbjct: 162 AMISDFGLCKKLAVGRHSFSRR--SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
Query: 276 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 335
++++ K +R A + GA S
Sbjct: 220 ------------------------------YYVISEGSHPFGKSLQRQANILL--GACSL 247
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
D + +H D A +LI + ++ DP +R A+ L+HPFF
Sbjct: 248 DCLHP-----------EKHEDVIARELI---EKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 73 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 125
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 149 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 188
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 189 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 242
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 243 VCGDIPFEHDEEI 255
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 130 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 169
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 170 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 223
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 224 VCGDIPFEHDEEI 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 82/240 (34%), Gaps = 74/240 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARH-----------DIGG-------------------------TRYRSFPIDLVREL--- 166
H GG Y+ P DL ++
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 167 ------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
Q+ + + F+ + IH DL NILL VK+ D+ KD +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 208 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 129 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 168
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 169 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 222
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 223 VCGDIPFEHDEEI 235
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 130 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 169
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 170 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 223
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 224 VCGDIPFEHDEEI 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 82/240 (34%), Gaps = 74/240 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH-----------DIGG-------------------------TRYRSFPIDLVREL--- 166
H GG Y+ P DL ++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 167 ------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
Q+ + + F+ + IH DL NILL VK+ D+ KD +
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 199 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 130 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 169
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 170 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 223
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 224 VCGDIPFEHDEEI 236
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 150 IGGTRYRSFPIDLVRELGRQLLESVAF--------MHELRLIHTDLKPENILLVSAEYVK 201
I +Y+ R + ++E + + H+ R+ H L L +++ K
Sbjct: 72 I--VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICK 124
Query: 202 VPDYKFLSRSSKDGSYFKNL--PKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRA 253
+Y R +N+ + +K+ DFG T QD S + A
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 254 PEVILGLGWNYPCDLWSVGCILVEL 278
PE + ++ D+WS G +L EL
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 115 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 154
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 155 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 209 VCGDIPFEHDEEI 221
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 129 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 168
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 169 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 222
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 223 VCGDIPFEHDEEI 235
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 115 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 154
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 155 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 209 VCGDIPFEHDEEI 221
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 84/220 (38%), Gaps = 58/220 (26%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ L ++G+G FG V C + E+VA+K ++ S ++ EI++L+ L +
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 I---GGTRYRS-----------FP--------------IDLVR--ELGRQLLESVAFMHE 179
I G Y + P ID ++ + Q+ + + ++
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGSTTFE 238
R IH DL NIL+ + VK+ D+ +D K P S I
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----------- 184
Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ APE + ++ D+WS G +L EL
Sbjct: 185 -----------FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 114 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 153
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 154 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 207
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 208 VCGDIPFEHDEEI 220
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 89/240 (37%), Gaps = 59/240 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH +L
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAA 385
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 386 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 423
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 424 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 482
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 113 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 152
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 153 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 206
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 207 VCGDIPFEHDEEI 219
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 82/240 (34%), Gaps = 74/240 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH-----------DIGG-------------------------TRYRSFPIDLVREL--- 166
H GG Y+ P DL ++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 167 ------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
Q+ + + F+ + IH DL NILL VK+ D+ KD +
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 199 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 115 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 154
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 155 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 209 VCGDIPFEHDEEI 221
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 142 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 181
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 182 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 236 VCGDIPFEHDEEI 248
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 114 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 153
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 154 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 207
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 208 VCGDIPFEHDEEI 220
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 162 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 201
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 202 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 255
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 256 VCGDIPFEHDEEI 268
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 157 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 196
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 197 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 251 VCGDIPFEHDEEI 263
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 137 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 176
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 177 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 230
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 231 VCGDIPFEHDEEI 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 142 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 181
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 182 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 236 VCGDIPFEHDEEI 248
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 89/240 (37%), Gaps = 59/240 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH +L
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAA 346
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 347 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 384
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 385 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 143 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 182
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 183 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 237 VCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 142 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 181
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 182 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 236 VCGDIPFEHDEEI 248
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 157 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 196
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 197 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 251 VCGDIPFEHDEEI 263
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 142 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 181
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 182 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 235
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 236 VCGDIPFEHDEEI 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 143 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 182
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 183 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 237 VCGDIPFEHDEEI 249
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 143 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 182
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 183 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 237 VCGDIPFEHDEEI 249
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 104/284 (36%), Gaps = 88/284 (30%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI---- 150
++L +G+G FG V+ + + VA+K +++ + +A + E V+ +L ++
Sbjct: 196 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 151 -------GG----TRY--RSFPIDLVRELGRQLL-------------ESVAFMHELRLIH 184
GG T Y + +D +R GR +L E++ ++ +H
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DL N+L+ KV D+ +S K LP
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK-------------------- 351
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 304
+ APE + ++ D+WS G +L E+ S G +
Sbjct: 352 ------WTAPEALREKKFSTKSDVWSFGILLWEIYS--------------------FGRV 385
Query: 305 PHHMVIRADR--RAEKYFRRGARLDWPDGA--TSRDSMRAVWKL 344
P+ + D R EK G ++D PDG D M+ W L
Sbjct: 386 PYPRIPLKDVVPRVEK----GYKMDAPDGCPPAVYDVMKNCWHL 425
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 157 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 196
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 197 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 251 VCGDIPFEHDEEI 263
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 110 ELARSFFWQVLEAVRHCHNXGVLHRDIKDENILID------------LNRGE-------- 149
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 150 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 204 VCGDIPFEHDEEI 216
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 143 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 182
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 183 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 236
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 237 VCGDIPFEHDEEI 249
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 110 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 149
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 150 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 204 VCGDIPFEHDEEI 216
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 89/240 (37%), Gaps = 59/240 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH +L
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAA 343
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 344 RNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 381
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 382 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 440
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 94/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 140
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y IK
Sbjct: 141 RNCLVGENHLVKVADFG-LSRLMTGDTYTAPAGAKFPIK--------------------- 178
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 179 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 237
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 238 CPEKVYELMRA 248
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 94/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y IK
Sbjct: 142 RNCLVGENHLVKVADFG-LSRLMTGDTYTAPAGAKFPIK--------------------- 179
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q +E LE MER G
Sbjct: 180 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 239 CPEKVYELMRA 249
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 28/133 (21%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
+L R Q+LE+V H ++H D+K ENIL+ L+R
Sbjct: 110 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE-------- 149
Query: 221 LPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVEL 278
+KLIDFGS + ++ TR Y PE I ++ +WS+G +L ++
Sbjct: 150 ------LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203
Query: 279 CSGEALFQTHENL 291
G+ F+ E +
Sbjct: 204 VCGDIPFEHDEEI 216
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 82/240 (34%), Gaps = 74/240 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARH-----------DIGG-------------------------TRYRSFPIDLVREL--- 166
H GG Y+ P DL ++
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 167 ------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
Q+ + + F+ + IH DL NILL VK+ D+ KD +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 208 GDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 53/226 (23%)
Query: 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI---GG 152
+L ++G G FG VV+ + + VA+K+++ + + E + +L+ + G
Sbjct: 12 LLKELGSGQFG-VVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 153 TRYRSFPIDLVREL-------------GR-----QLLE-------SVAFMHELRLIHTDL 187
+ +PI +V E G+ QLLE +AF+ + IH DL
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDL 130
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
N L+ VKV D+ ++R D Y ++ +K
Sbjct: 131 AARNCLVDRDLCVKVSDFG-MTRYVLDDQYVSSVGTKFPVK------------------- 170
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 292
+ APEV ++ D+W+ G ++ E+ S G+ + + N E
Sbjct: 171 ---WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 27/128 (21%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKI-------------------------VRSI 128
Y++ ++GEG+FG + E + + VAIK + ++
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 70
Query: 129 NKYREAAMIEIDVLQRL--ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTD 186
+ + + + V+ L + D+ R F + V +Q+L V +HE L++ D
Sbjct: 71 YYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRD 130
Query: 187 LKPENILL 194
+KP+N L+
Sbjct: 131 IKPDNFLI 138
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 21/118 (17%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E+ +QL ++ F+ E LIH ++ +NILL+ E K + F+ + S G LPK
Sbjct: 117 EVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKD 175
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSG 281
+ I + PE I N D WS G L E+CSG
Sbjct: 176 ILQERIP-------------------WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 27/128 (21%)
Query: 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKI-------------------------VRSI 128
Y++ ++GEG+FG + E + + VAIK + ++
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 71
Query: 129 NKYREAAMIEIDVLQRL--ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTD 186
+ + + + V+ L + D+ R F + V +Q+L V +HE L++ D
Sbjct: 72 YYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRD 131
Query: 187 LKPENILL 194
+KP+N L+
Sbjct: 132 IKPDNFLI 139
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 27/150 (18%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + E+ + + E++ ++ + +H DL N L+ VKV D+ LSR D Y
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEY 160
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
+ ++ + PEV++ ++ D+W+ G ++ E
Sbjct: 161 TSSRGSKFPVR----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWE 198
Query: 278 LCSGEAL----FQTHENLEHLAMMERVLGP 303
+ S + F E EH+A R+ P
Sbjct: 199 IYSLGKMPYERFTNSETAEHIAQGLRLYRP 228
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 81/238 (34%), Gaps = 72/238 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R ++ +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 146 ARHD-----IGGTRYRSFPIDLVRELGR-------------------------------- 168
H +G P+ ++ E +
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 169 ------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
Q+ + + F+ + IH DL NILL VK+ D+ KD +
Sbjct: 150 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 210 ARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 89/227 (39%), Gaps = 55/227 (24%)
Query: 96 ILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR---HDIG 151
+ ++G G FG V + + N+ K VAIK +R E + E +V+ +L+ +
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 152 GTRYRSFPIDLVRE-----------------------LGRQL--LESVAFMHELRLIHTD 186
G PI LV E LG L E +A++ E +IH D
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRD 128
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L N L+ + +KV D+ ++R D Y + +K
Sbjct: 129 LAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------------ 169
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 292
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 170 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 69/185 (37%), Gaps = 49/185 (26%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--------- 149
K+G G FG + F K E A +V+ + E+ QR+A+ D
Sbjct: 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERK 103
Query: 150 -----------------IGGTRYR-------------------SFPIDLVRELGRQLLES 173
G YR +F V +LG ++L+
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDV 163
Query: 174 VAFMHELRLIHTDLKPENILL--VSAEYVKVPDYKFLSRSSKDGSY--FKNLPKSSAIKL 229
+ ++HE +H D+K N+LL + + V + DY R +G++ ++ P+
Sbjct: 164 LEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGT 223
Query: 230 IDFGS 234
I+F S
Sbjct: 224 IEFTS 228
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 90/242 (37%), Gaps = 59/242 (24%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +K+ VAIK ++ + R + E ++ + +
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 150 I---GGTRYRSFPIDLVRE-------------------------LGRQLLESVAFMHELR 181
I G S P+ ++ E + R + + ++ E+
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS 138
Query: 182 LIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+H DL NIL+ S KV D+ +FL +S D + +L I+
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR---------- 188
Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM 297
+ APE I + D WS G ++ E+ S GE + N + + +
Sbjct: 189 ------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 236
Query: 298 ER 299
E+
Sbjct: 237 EQ 238
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 89/227 (39%), Gaps = 55/227 (24%)
Query: 96 ILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR---HDIG 151
+ ++G G FG V + + N+ K VAIK +R E + E +V+ +L+ +
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 152 GTRYRSFPIDLVRE-----------------------LGRQL--LESVAFMHELRLIHTD 186
G PI LV E LG L E +A++ E +IH D
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 129
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L N L+ + +KV D+ ++R D Y + +K
Sbjct: 130 LAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------------ 170
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 292
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 171 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G FG+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 137
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR + G T H + +
Sbjct: 138 RNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFPIK-- 175
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G Q +E LE MER G
Sbjct: 176 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 235 CPEKVYELMRA 245
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 107/299 (35%), Gaps = 92/299 (30%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 19 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 78
Query: 146 ARHDIG---GTRYRSFPIDLVREL---------------------GR------------- 168
H + G + P +V EL GR
Sbjct: 79 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
++ + +A+++ + +H +L N ++ VK+ D+ ++R + Y++ K
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFG-MTRDIYETDYYRKGGKG---- 193
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQT 287
++ R + APE + + D+WS G +L E+ S E +Q
Sbjct: 194 ----------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG 236
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 344
N E+VL K+ G LD PD R D MR W+
Sbjct: 237 LSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRMCWQF 272
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 107/299 (35%), Gaps = 92/299 (30%)
Query: 93 RYRILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
+ +L ++G+G+FG V E E + VA+K V RE + E V++
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIG---GTRYRSFPIDLVREL---------------------GR------------- 168
H + G + P +V EL GR
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
++ + +A+++ + +H +L N ++ VK+ D+ ++R + Y++ K
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFG-MTRDIYETDYYRKGGKG---- 192
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQT 287
++ R + APE + + D+WS G +L E+ S E +Q
Sbjct: 193 ----------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG 235
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 344
N E+VL K+ G LD PD R D MR W+
Sbjct: 236 LSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRMCWQF 271
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 26/148 (17%)
Query: 154 RYRSFPIDLVREL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
+ R F +DL + QL ++A++ R +H D+ N+L+ S + VK+ D+ LSR
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-LSRY 160
Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 271
+D + K IK + APE I + D+W
Sbjct: 161 MEDSTXXKASKGKLPIK----------------------WMAPESINFRRFTSASDVWMF 198
Query: 272 G-CILVELCSGEALFQTHENLEHLAMME 298
G C+ L G FQ +N + + +E
Sbjct: 199 GVCMWEILMHGVKPFQGVKNNDVIGRIE 226
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 30/129 (23%)
Query: 156 RSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
++ P D++ ++ +++++ +H +L +IH D+KP N+L+ + VK D+ D
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI----LGLGWNYPCDLWS 270
K ID G + Y APE I G++ D+WS
Sbjct: 191 -----------VAKDIDAG--------------CKPYXAPERINPELNQKGYSVKSDIWS 225
Query: 271 VGCILVELC 279
+G +EL
Sbjct: 226 LGITXIELA 234
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 60/216 (27%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI---- 150
++L +G+G FG V+ + + VA+K +++ + +A + E V+ +L ++
Sbjct: 15 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 151 -------GG----TRY--RSFPIDLVRELGRQLL-------------ESVAFMHELRLIH 184
GG T Y + +D +R GR +L E++ ++ +H
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 131
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DL N+L+ KV D+ +S K LP
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK-------------------- 170
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE + ++ D+WS G +L E+ S
Sbjct: 171 ------WTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 21/118 (17%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
E+ +QL ++ F+ E LIH ++ +NILL+ E K + F+ + S G LPK
Sbjct: 117 EVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKD 175
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSG 281
+ I + PE I N D WS G L E+CSG
Sbjct: 176 ILQERIP-------------------WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 153 TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 212
T + P LV ++L + +H+ +IH D+KP+N +L + FL +
Sbjct: 164 TPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNG---------FLEQDD 214
Query: 213 KD----GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 268
+D G +L +S +KL G T F + T ++ E++ WNY D
Sbjct: 215 EDDLSAGLALIDLGQSIDMKLFPKG-TIFTAK-----CETSGFQCVEMLSNKPWNYQIDY 268
Query: 269 WSVGCILVELCSG 281
+ V + + G
Sbjct: 269 FGVAATVYCMLFG 281
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 22/115 (19%)
Query: 166 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 225
+ RQ+ +A++ E + +H DL N L+ VK+ D+ LSR+ Y+K
Sbjct: 179 IARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFG-LSRNIYSADYYK------ 231
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
D + + R + PE I + D+W+ G +L E+ S
Sbjct: 232 --------------ADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 89/227 (39%), Gaps = 55/227 (24%)
Query: 96 ILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR---HDIG 151
+ ++G G FG V + + N+ K VAIK +R E + E +V+ +L+ +
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 152 GTRYRSFPIDLVRE-----------------------LGRQL--LESVAFMHELRLIHTD 186
G PI LV E LG L E +A++ E +IH D
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 131
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L N L+ + +KV D+ ++R D Y + +K
Sbjct: 132 LAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------------ 172
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 292
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 173 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 89/227 (39%), Gaps = 55/227 (24%)
Query: 96 ILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---DIG 151
+ ++G G FG V + + N+ K VAIK +R E + E +V+ +L+ +
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 152 GTRYRSFPIDLVRE-----------------------LGRQL--LESVAFMHELRLIHTD 186
G PI LV E LG L E +A++ E +IH D
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L N L+ + +KV D+ ++R D Y + +K
Sbjct: 127 LAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------------ 167
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 292
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 168 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 89/227 (39%), Gaps = 55/227 (24%)
Query: 96 ILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---DIG 151
+ ++G G FG V + + N+ K VAIK +R E + E +V+ +L+ +
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 152 GTRYRSFPIDLVRE-----------------------LGRQL--LESVAFMHELRLIHTD 186
G PI LV E LG L E +A++ E +IH D
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 128
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L N L+ + +KV D+ ++R D Y + +K
Sbjct: 129 LAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------------ 169
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 292
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 170 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 86/235 (36%), Gaps = 59/235 (25%)
Query: 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKI------------------------ 124
++ P +R+ K+G G FG++ + E VAIK+
Sbjct: 1 SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATE 60
Query: 125 -VRSINKYREAAMIEIDVLQRL--ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELR 181
V + + VL+ L + D+ R+F + V + QL+ + ++H
Sbjct: 61 GVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKS 120
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-------- 233
LI+ D+KPEN L V P K + AI +IDFG
Sbjct: 121 LIYRDVKPENFL------VGRPGTK----------------RQHAIHIIDFGLAKEYIDP 158
Query: 234 --STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
+++H + T Y + LG + DL ++G + + G +Q
Sbjct: 159 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 213
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 80/239 (33%), Gaps = 73/239 (30%)
Query: 93 RYRILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
R + +G G FGQV+E F +K VA+K+++ + E A M E+ +L +
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 88
Query: 146 ARHD-----IGGTRYRSFPIDLVRELGR-------------------------------- 168
H +G P+ ++ E +
Sbjct: 89 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 169 -------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
Q+ + + F+ + IH DL NILL VK+ D+ KD +
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+K + APE I + D+WS G +L E+ S
Sbjct: 209 DARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 174
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
D EH+ + + APE + +++ D W G L E+
Sbjct: 175 --DDHXVMQEHRKVPFA-----WCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 137
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR + G T H + +
Sbjct: 138 RNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFPIK-- 175
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G Q +E LE MER G
Sbjct: 176 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 235 CPEKVYELMRA 245
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 91/242 (37%), Gaps = 59/242 (24%)
Query: 95 RILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
+I +G G FG+V +++ VAIK ++S K R + E ++ + +
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 150 I---GGTRYRSFPIDLVRE-------------------------LGRQLLESVAFMHELR 181
+ G +S P+ ++ E + R + + ++ ++
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 182 LIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
+H L NIL+ S KV D+ +FL + D +Y L I+
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR---------- 179
Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM 297
+ APE I + D+WS G ++ E+ S GE + N + + +
Sbjct: 180 ------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 227
Query: 298 ER 299
E+
Sbjct: 228 EQ 229
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 159 PIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDY 205
PI +++ + + +L S +++H E + H D+KP NIL+ VK+ D+
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 60/216 (27%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI---- 150
++L +G+G FG V+ + + VA+K +++ + +A + E V+ +L ++
Sbjct: 24 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 151 -------GG----TRY--RSFPIDLVRELGRQLL-------------ESVAFMHELRLIH 184
GG T Y + +D +R GR +L E++ ++ +H
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DL N+L+ KV D+ +S K LP
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK-------------------- 179
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ APE + ++ D+WS G +L E+ S
Sbjct: 180 ------WTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 174
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ Q+H V + APE + +++ D W G L E+
Sbjct: 175 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 164
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
D EH+ + + APE + +++ D W G L E+
Sbjct: 165 --DDHXVMQEHRKVPFA-----WCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ Q+H V + APE + +++ D W G L E+
Sbjct: 169 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 104/284 (36%), Gaps = 88/284 (30%)
Query: 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI---- 150
++L +G+G FG V+ + + VA+K +++ + +A + E V+ +L ++
Sbjct: 9 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 151 -------GG----TRY--RSFPIDLVRELGRQLL-------------ESVAFMHELRLIH 184
GG T Y + +D +R GR +L E++ ++ +H
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 125
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
DL N+L+ KV D+ +S K LP
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK-------------------- 164
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 304
+ APE + ++ D+WS G +L E+ S G +
Sbjct: 165 ------WTAPEALREKKFSTKSDVWSFGILLWEIYS--------------------FGRV 198
Query: 305 PHHMVIRADR--RAEKYFRRGARLDWPDGA--TSRDSMRAVWKL 344
P+ + D R EK G ++D PDG + M+ W L
Sbjct: 199 PYPRIPLKDVVPRVEK----GYKMDAPDGCPPAVYEVMKNCWHL 238
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ E++L+H DL NIL+ +K+ D+ ++ S K +K
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK 217
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ S DH Y + D+WS G +L E+ +
Sbjct: 218 WMAIESLF----DHIYTTQS------------------DVWSFGVLLWEIVT 247
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ Q+H V + APE + +++ D W G L E+
Sbjct: 169 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+KN
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYKNTTNGRL-- 221
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ APE + + + D+WS G ++ E+
Sbjct: 222 -------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 164
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ Q+H V + APE + +++ D W G L E+
Sbjct: 165 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ E + ++ R IH DL N+LL + + VK+ D+ + + LP++
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 164
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
+ Q+H V + APE + +++ D W G L E+
Sbjct: 165 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 27/150 (18%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
F + E+ + + E++ ++ + +H DL N L+ VKV D+ LSR D
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEE 175
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
++ ++ + PEV++ ++ D+W+ G ++ E
Sbjct: 176 TSSVGSKFPVR----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWE 213
Query: 278 LCSGEAL----FQTHENLEHLAMMERVLGP 303
+ S + F E EH+A R+ P
Sbjct: 214 IYSLGKMPYERFTNSETAEHIAQGLRLYRP 243
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 32/141 (22%)
Query: 156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
R+F + V + QLL + ++H LI+ D+KPEN L+ + G
Sbjct: 92 RTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLI-----------------GRQG 134
Query: 216 SYFKNLPKSSAIKLIDFG----------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYP 265
+ K I +IDFG +++H + T Y + LG +
Sbjct: 135 N-----KKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 189
Query: 266 CDLWSVGCILVELCSGEALFQ 286
DL ++G + + G +Q
Sbjct: 190 DDLEALGHMFMYFLRGSLPWQ 210
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + F+ + IH DL NILL VK+ D+ K+ Y +
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK-------- 258
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
G T + + APE I ++ D+WS G +L E+ S
Sbjct: 259 ----GDTRLPLK----------WMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 60/251 (23%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRY 155
K+G G +G+V E + VA+K ++ E + E V++ + ++ G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 156 RSFP-------------IDLVRELGRQLLESVA-------------FMHELRLIHTDLKP 189
R P +D +RE RQ + +V ++ + IH DL
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 137
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR + G T H + +
Sbjct: 138 RNCLVGENHLVKVADFG-LSR-------------------LMTGDTFTAHAGAKFPIK-- 175
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G Q +E LE MER G
Sbjct: 176 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Query: 303 -PLPHHMVIRA 312
P + ++RA
Sbjct: 235 CPEKVYELMRA 245
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 49/227 (21%)
Query: 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKI-------------------------VR 126
P +R+ K+G G FG++ + E VAIK+ +
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIP 68
Query: 127 SINKYREAAMIEIDVLQRL--ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
+ + VL+ L + D+ R+F + V + QL+ + ++H LI+
Sbjct: 69 QVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIY 128
Query: 185 TDLKPENILL-----VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
D+KPEN L+ + + + + D+ L++ D K++P +
Sbjct: 129 RDVKPENFLIGRPGNKTQQVIHIIDFA-LAKEYIDPETKKHIP----------------Y 171
Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
++H + T Y + LG + DL ++G + + G +Q
Sbjct: 172 REHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 49/227 (21%)
Query: 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKI-------------------------VR 126
P +R+ K+G G FG++ + E VAIK+ +
Sbjct: 30 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIP 89
Query: 127 SINKYREAAMIEIDVLQRL--ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
+ + VL+ L + D+ R+F + V + QL+ + ++H LI+
Sbjct: 90 QVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIY 149
Query: 185 TDLKPENILL-----VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
D+KPEN L+ + + + + D+ L++ D K++P +
Sbjct: 150 RDVKPENFLIGRPGNKTQQVIHIIDFA-LAKEYIDPETKKHIP----------------Y 192
Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
++H + T Y + LG + DL ++G + + G +Q
Sbjct: 193 REHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 239
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 27/130 (20%)
Query: 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKI-------------------------VR 126
P +R+ K+G G FG++ + E VAIK+ +
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIP 68
Query: 127 SINKYREAAMIEIDVLQRL--ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
+ + VL+ L + D+ R+F + V + QL+ + ++H LI+
Sbjct: 69 QVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIY 128
Query: 185 TDLKPENILL 194
D+KPEN L+
Sbjct: 129 RDVKPENFLI 138
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 96 ILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---DIG 151
+ ++G G FG V + + N+ K VAIK ++ + + + E +V+ +L+ +
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDK--VAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 152 GTRYRSFPIDLVRE-----------------------LGRQL--LESVAFMHELRLIHTD 186
G PI LV E LG L E +A++ E +IH D
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 148
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
L N L+ + +KV D+ ++R D Y + +K
Sbjct: 149 LAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------------ 189
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 292
+ +PEV ++ D+WS G ++ E+ S G+ ++ N E
Sbjct: 190 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 25/214 (11%)
Query: 95 RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
+ +S++G+G FG V C + LVA+K ++ S + EI +L+ L H
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HS 67
Query: 150 IGGTRYRSFPIDLVRELGRQLLE---SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 206
+YR R R ++E S L+ L +LL S++ K +Y
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 207 FLSRS-SKDGSYFKNLPKSSA-IKLIDFGSTTFEHQDHSYVV------STRHYRAPEVIL 258
R +D + L +S A +K+ DFG D V S + APE +
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 259 GLGWNYPCDLWSVGCILVEL-------CSGEALF 285
++ D+WS G +L EL CS A F
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 30/144 (20%)
Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
R++ I ++R RQ+L+ + F+H +IH DLK +NI +
Sbjct: 122 RFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP-------------- 167
Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWS 270
+ ++K+ D G T + + V+ T + APE ++ D+++
Sbjct: 168 ------------TGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEX-YEEKYDESVDVYA 214
Query: 271 VGCILVELCSGEALFQTHENLEHL 294
G +E + E + +N +
Sbjct: 215 FGXCXLEXATSEYPYSECQNAAQI 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ E+ L+H DL NIL+ +K+ D+ ++ S K +K
Sbjct: 158 QISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK 217
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ S DH Y + D+WS G +L E+ +
Sbjct: 218 WMAIESLF----DHIYTTQS------------------DVWSFGVLLWEIVT 247
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ E RL+H DL N+L+ S +VK+ D+ D + IK
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ + HYR + + D+WS G + EL +
Sbjct: 185 WM--------------ALECIHYRK--------FTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ E RL+H DL N+L+ S +VK+ D+ D + IK
Sbjct: 148 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 207
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
+ + HYR + + D+WS G + EL +
Sbjct: 208 WM--------------ALECIHYRK--------FTHQSDVWSYGVTIWELMT 237
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K K++ +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK---KTTNGR 220
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
L + APE + + + D+WS G ++ E+
Sbjct: 221 L------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K K++ +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK---KTTNGR 220
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
L + APE + + + D+WS G ++ E+
Sbjct: 221 L------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K K++ +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK---KTTNGR 220
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
L + APE + + + D+WS G ++ E+
Sbjct: 221 L------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K K++ +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK---KTTNGR 220
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
L + APE + + + D+WS G ++ E+
Sbjct: 221 L------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K K++ +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK---KTTNGR 220
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
L + APE + + + D+WS G ++ E+
Sbjct: 221 L------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K K++ +
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFG-LARDINNIDYYK---KTTNGR 207
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
L + APE + + + D+WS G ++ E+
Sbjct: 208 L------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K K++ +
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK---KTTNGR 212
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
L + APE + + + D+WS G ++ E+
Sbjct: 213 L------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K K++ +
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK---KTTNGR 266
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
L + APE + + + D+WS G ++ E+
Sbjct: 267 L------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ E + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 170
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
QL + ++ + IH DL N+L+ +K+ D+ L+R + Y+K K++ +
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG-LARDINNIDYYK---KTTNGR 209
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
L + APE + + + D+WS G ++ E+
Sbjct: 210 L------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 21/120 (17%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
DL+ G Q+ + ++ E + +H DL N +L + VKV D+ L+R D Y+
Sbjct: 125 DLI-SFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFG-LARDILDREYYSV 182
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
Q H + + A E + + D+WS G +L EL +
Sbjct: 183 -------------------QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG-----S 216
L+ G Q+ + + ++ E ++H +L N+LL S V+V D+ D S
Sbjct: 116 LLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 175
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
K K A++ I FG T + SY V+
Sbjct: 176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 207
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL--VSAEYVKVPDYKFLSRSSK 213
+ F V +L ++L+ + ++HE +H D+K N+LL + + V + DY R
Sbjct: 147 KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206
Query: 214 DGSY--FKNLPKSSAIKLIDFGS 234
+G + +K PK I+F S
Sbjct: 207 EGVHKEYKEDPKRCHDGTIEFTS 229
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG-----S 216
L+ G Q+ + + ++ E ++H +L N+LL S V+V D+ D S
Sbjct: 134 LLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 193
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
K K A++ I FG T + SY V+
Sbjct: 194 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 225
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL--VSAEYVKVPDYKFLSRSSK 213
+ F V +L ++L+ + ++HE +H D+K N+LL + + V + DY R
Sbjct: 147 KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206
Query: 214 DGSY--FKNLPKSSAIKLIDFGS 234
+G + +K PK I+F S
Sbjct: 207 EGVHKEYKEDPKRCHDGTIEFTS 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 85
Query: 141 VLQRLARH----DIGGTRYRSFPIDLVRELGR--------QLLESVAFMHELRLIHTDLK 188
+++ + +H ++ G + P+ ++ E Q E + H
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN--- 142
Query: 189 PENIL----LVSAEYVKVPDYKFLSRSS---KDGSYFKNL-PKSSAIKLIDFGSTTFEHQ 240
PE L LVS Y ++L+ +D + L + + +K+ DFG H
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 241 DHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
Y +T + APE + + + D+WS G +L E+
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 85
Query: 141 VLQRLARH----DIGGTRYRSFPIDLVRELG-----RQLLESVAFMHELRLIHTDLKPEN 191
+++ + +H ++ G + P+ ++ E R+ L++ + PE
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEE 145
Query: 192 IL----LVSAEYVKVPDYKFLSRSS---KDGSYFKNL-PKSSAIKLIDFGSTTFEHQDHS 243
L LVS Y ++L+ +D + L + + +K+ DFG H
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
Query: 244 YVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
Y +T + APE + + + D+WS G +L E+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1JAL|A Chain A, Ychf Protein (Hi0393)
pdb|1JAL|B Chain B, Ychf Protein (Hi0393)
Length = 363
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Query: 104 TFGQVVECFDNEKKELVAIKI-----VRSINKYREAAMIEID----VLQRLARHDIGGTR 154
G VV CF+N+ VA KI + +IN E A+ ++D +QRL + GG +
Sbjct: 99 AIGHVVRCFENDDIVHVAGKIDPLDDIDTINT--ELALADLDSCERAIQRLQKRAKGGDK 156
Query: 155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
F + ++ ++ +LE+ + + L +L+ + S ++ + +++ ++D
Sbjct: 157 EAKFELSVMEKI-LPVLENAGMIRSVGLDKEELQA----IKSYNFLTLKPTMYIANVNED 211
Query: 215 GSYFKNLP 222
G F+N P
Sbjct: 212 G--FENNP 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 70
Query: 141 VLQRLARH----DIGGTRYRSFPIDLVRELG-----RQLLESVAFMHELRLIHTDLKPEN 191
+++ + +H ++ G + P+ ++ E R+ L++ + PE
Sbjct: 71 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEE 130
Query: 192 IL----LVSAEYVKVPDYKFLSRSS---KDGSYFKNL-PKSSAIKLIDFGSTTFEHQDHS 243
L LVS Y ++L+ +D + L + + +K+ DFG H
Sbjct: 131 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190
Query: 244 YVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
Y +T + APE + + + D+WS G +L E+
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
ID + LG LL S+A + + H D++P N+++ + ++ ++ D+ + + +D S+
Sbjct: 339 IDREKILGS-LLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397
Query: 220 NLPKS 224
NL +S
Sbjct: 398 NLVQS 402
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
ID + LG LL S+A + + H D++P N+++ + ++ ++ D+ + + +D S+
Sbjct: 339 IDREKILGS-LLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397
Query: 220 NLPKS 224
NL +S
Sbjct: 398 NLVQS 402
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 22/121 (18%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I LV L R + + ++ ++ +H DL NIL+ S KV D+ LSR +D
Sbjct: 147 IQLVGML-RGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAA 204
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
+ I + + +PE I + D+WS G +L E+
Sbjct: 205 YTTRGGKIPI--------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 280 S 280
S
Sbjct: 245 S 245
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
ID + LG LL S+A + + H D++P N+++ + ++ ++ D+ + + +D S+
Sbjct: 339 IDREKILG-SLLRSLAALEKKGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397
Query: 220 NLPKS 224
NL +S
Sbjct: 398 NLVQS 402
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 84/234 (35%), Gaps = 67/234 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR--EAAMIEIDVLQRLARHDI------- 150
+G+G V + +L AIK+ +I+ R + M E +VL++L +I
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 151 --GGTRYRSFPIDLV--------------------RELGRQLLESVAFMHELR---LIHT 185
TR++ ++ E L + V M+ LR ++H
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
++KP NI+ V E DG S KL DFG+ D +V
Sbjct: 137 NIKPGNIMRVIGE---------------DG--------QSVYKLTDFGAARELEDDEQFV 173
Query: 246 V--STRHYRAPEV----IL----GLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
T Y P++ +L + DLWS+G +G F+ E
Sbjct: 174 XLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 34/155 (21%)
Query: 128 INKYREA----AMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
+NK+ A AMI +D R A+ ++G + + + Q+ + ++ +
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELG--------LSQMLHIASQIASGMVYLASQHFV 155
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
H DL N L+ + VK+ D+ +SR Y++ G T
Sbjct: 156 HRDLATRNCLVGANLLVKIGDFG-MSRDVYSTDYYR------------VGGHT------- 195
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
++ R + PE I+ + D+WS G IL E+
Sbjct: 196 -MLPIR-WMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 169 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 175
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 176 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 89/243 (36%), Gaps = 59/243 (24%)
Query: 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG------ 152
K+G G +G+V + VA+K ++ E + E V++ + ++
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 153 --------TRYRSFP--IDLVRELGR-------------QLLESVAFMHELRLIHTDLKP 189
T Y + +D +RE R Q+ ++ ++ + IH DL
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAA 158
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
N L+ VKV D+ LSR +Y + IK
Sbjct: 159 RNCLVGENHVVKVADFG-LSRLMTGDTYTAHAGAKFPIK--------------------- 196
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMMERVLG 302
+ APE + ++ D+W+ G +L E+ + G L Q ++ LE ME+ G
Sbjct: 197 -WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEG 255
Query: 303 PLP 305
P
Sbjct: 256 CPP 258
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 180
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 166 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 131 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 171
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 172 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 166
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 167 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
P D V L Q+ + ++ ++H DL N+L+ VK+ D L R Y+
Sbjct: 127 PPDFVH-LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG-LFREVYAADYY 184
Query: 219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
K L S ++ R + APE I+ ++ D+WS G +L E+
Sbjct: 185 KLLGNS--------------------LLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
Query: 279 CS-GEALFQTHENLEHLAMM-ERVLGPLP 305
S G + + N + + M+ R + P P
Sbjct: 224 FSYGLQPYCGYSNQDVVEMIRNRQVLPCP 252
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 15 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 74
Query: 141 VLQRLARH----DIGGTRYRSFPIDLVRELG-----RQLLES---VAFMHELRLIHTDLK 188
+++ + +H ++ G + P+ ++ E R+ L++ + H
Sbjct: 75 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN--- 131
Query: 189 PENIL----LVSAEYVKVPDYKFLSRSS---KDGSYFKNL-PKSSAIKLIDFGSTTFEHQ 240
PE L LVS Y ++L+ +D + L + + +K+ DFG H
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 191
Query: 241 DHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
Y +T + APE + + + D+WS G +L E+
Sbjct: 192 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 190
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 191 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 18 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 77
Query: 141 VLQRLARH----DIGGTRYRSFPIDLVRELG-----RQLLES---VAFMHELRLIHTDLK 188
+++ + +H ++ G + P+ ++ E R+ L++ + H
Sbjct: 78 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN--- 134
Query: 189 PENIL----LVSAEYVKVPDYKFLSRSS---KDGSYFKNL-PKSSAIKLIDFGSTTFEHQ 240
PE L LVS Y ++L+ +D + L + + +K+ DFG H
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 194
Query: 241 DHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
Y +T + APE + + + D+WS G +L E+
Sbjct: 195 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 199
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 200 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 172
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 173 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 84/234 (35%), Gaps = 67/234 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR--EAAMIEIDVLQRLARHDI------- 150
+G+G V + +L AIK+ +I+ R + M E +VL++L +I
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 151 --GGTRYRSFPIDLV--------------------RELGRQLLESVAFMHELR---LIHT 185
TR++ ++ E L + V M+ LR ++H
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
++KP NI+ V E DG S KL DFG+ D +V
Sbjct: 137 NIKPGNIMRVIGE---------------DG--------QSVYKLTDFGAARELEDDEQFV 173
Query: 246 --VSTRHYRAPEV----IL----GLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
T Y P++ +L + DLWS+G +G F+ E
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 173
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 85
Query: 141 VLQRLARH----DIGGTRYRSFPIDLVRELG-----RQLLES---VAFMHELRLIHTDLK 188
+++ + +H ++ G + P+ ++ E R+ L++ + H
Sbjct: 86 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN--- 142
Query: 189 PENIL----LVSAEYVKVPDYKFLSRSS---KDGSYFKNL-PKSSAIKLIDFGSTTFEHQ 240
PE L LVS Y ++L+ +D + L + + +K+ DFG H
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 241 DHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
Y +T + APE + + + D+WS G +L E+
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 43/149 (28%)
Query: 85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYRE--- 133
A+ T + L K+G G FG V +C + AIK V N RE
Sbjct: 2 AMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYA 61
Query: 134 --------------AAMIEIDVLQRLARHDIGGT-------RYRSFPI-------DLVRE 165
+A E D + + GG+ YR DL+ +
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 166 LGRQLLESVAFMHELRLIHTDLKPENILL 194
+GR L ++H + L+H D+KP NI +
Sbjct: 122 VGRGL----RYIHSMSLVHMDIKPSNIFI 146
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 177
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 23/122 (18%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
P D V L Q+ + ++ ++H DL N+L+ VK+ D L R Y+
Sbjct: 144 PPDFVH-LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG-LFREVYAADYY 201
Query: 219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
K L S ++ R + APE I+ ++ D+WS G +L E+
Sbjct: 202 KLLGNS--------------------LLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
Query: 279 CS 280
S
Sbjct: 241 FS 242
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 19 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 78
Query: 141 VLQRLARH----DIGGTRYRSFPIDLVRELG-----RQLLES---VAFMHELRLIHTDLK 188
+++ + +H ++ G + P+ ++ E R+ L++ + H
Sbjct: 79 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN--- 135
Query: 189 PENIL----LVSAEYVKVPDYKFLSRSS---KDGSYFKNL-PKSSAIKLIDFGSTTFEHQ 240
PE L LVS Y ++L+ +D + L + + +K+ DFG H
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 195
Query: 241 DHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
Y +T + APE + + + D+WS G +L E+
Sbjct: 196 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 169
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 170 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 23/140 (16%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I LV L R + + ++ ++ +H DL NIL+ S KV D+ LSR +D
Sbjct: 124 IQLVGML-RGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAA 181
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
+ I + + APE I + D+WS G ++ E+
Sbjct: 182 YTTRGGKIPI--------------------RWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221
Query: 280 S-GEALFQTHENLEHLAMME 298
S GE + N + + +E
Sbjct: 222 SYGERPYWEMTNQDVIKAVE 241
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-------------------AK 166
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
L+ G+ E+ V + + A E IL + + D+WS G + EL +
Sbjct: 167 LL--GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 23/140 (16%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I LV L R + + ++ ++ +H DL NIL+ S KV D+ +SR +D
Sbjct: 131 IQLVGML-RGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFG-MSRVLEDDPEAA 188
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
+ I + + APE I + D+WS G ++ E+
Sbjct: 189 YTTRGGKIPI--------------------RWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
Query: 280 S-GEALFQTHENLEHLAMME 298
S GE + N + + +E
Sbjct: 229 SYGERPYWDMSNQDVIKAIE 248
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKD 214
Q+ + + ++ + RL+H DL N+L+ + ++VK+ D+ K L K+
Sbjct: 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 92 PRYRIL--SKMGEGTFGQVVEC----FDNEKKE---LVAIKIVRSINKYREAA--MIEID 140
PR R++ +GEG FGQVV D +K VA+K+++S ++ + + E++
Sbjct: 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 126
Query: 141 VLQRLARH----DIGGTRYRSFPIDLVRELG-----RQLLES---VAFMHELRLIHTDLK 188
+++ + +H ++ G + P+ ++ E R+ L++ + H
Sbjct: 127 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN--- 183
Query: 189 PENIL----LVSAEYVKVPDYKFLSRSS---KDGSYFKNL-PKSSAIKLIDFGSTTFEHQ 240
PE L LVS Y ++L+ +D + L + + +K+ DFG H
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 243
Query: 241 DHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
Y +T + APE + + + D+WS G +L E+
Sbjct: 244 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 22/121 (18%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I LV L R + + ++ ++ +H DL NIL+ S KV D+ LSR +D
Sbjct: 147 IQLVGML-RGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAA 204
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
+ I + + +PE I + D+WS G +L E+
Sbjct: 205 YTTRGGKIPI--------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 280 S 280
S
Sbjct: 245 S 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 22/121 (18%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I LV L R + + ++ ++ +H DL NIL+ S KV D+ LSR +D
Sbjct: 147 IQLVGML-RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAA 204
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
+ I + + +PE I + D+WS G +L E+
Sbjct: 205 YTTRGGKIPI--------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 280 S 280
S
Sbjct: 245 S 245
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 53/143 (37%), Gaps = 43/143 (30%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYRE--------- 133
T + L K+G G FG V +C + AIK V N RE
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 134 --------AAMIEIDVLQRLARHDIGGT-------RYRSFPI-------DLVRELGRQLL 171
+A E D + + GG+ YR DL+ ++GR L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL- 128
Query: 172 ESVAFMHELRLIHTDLKPENILL 194
++H + L+H D+KP NI +
Sbjct: 129 ---RYIHSMSLVHMDIKPSNIFI 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 53/143 (37%), Gaps = 43/143 (30%)
Query: 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYRE--------- 133
T + L K+G G FG V +C + AIK V N RE
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 134 --------AAMIEIDVLQRLARHDIGGT-------RYRSFPI-------DLVRELGRQLL 171
+A E D + + GG+ YR DL+ ++GR L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL- 126
Query: 172 ESVAFMHELRLIHTDLKPENILL 194
++H + L+H D+KP NI +
Sbjct: 127 ---RYIHSMSLVHMDIKPSNIFI 146
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 23/140 (16%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I LV L R + + ++ ++ +H DL NIL+ S KV D+ +SR +D
Sbjct: 116 IQLVGML-RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFG-MSRVLEDDPEAA 173
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
+ I + + APE I + D+WS G ++ E+
Sbjct: 174 YTTRGGKIPI--------------------RWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
Query: 280 S-GEALFQTHENLEHLAMME 298
S GE + N + + +E
Sbjct: 214 SYGERPYWDMSNQDVIKAIE 233
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 22/121 (18%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I LV L R + + ++ ++ +H DL NIL+ S KV D+ LSR +D
Sbjct: 147 IQLVGML-RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAA 204
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
+ I + + +PE I + D+WS G +L E+
Sbjct: 205 YTTRGGKIPI--------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 280 S 280
S
Sbjct: 245 S 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 22/121 (18%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I LV L R + + ++ ++ +H DL NIL+ S KV D+ LSR +D
Sbjct: 147 IQLVGML-RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAA 204
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
+ I + + +PE I + D+WS G +L E+
Sbjct: 205 YTTRGGKIPI--------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 280 S 280
S
Sbjct: 245 S 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 22/121 (18%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
I LV L R + + ++ ++ +H DL NIL+ S KV D+ LSR +D
Sbjct: 147 IQLVGML-RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAA 204
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
+ I + + +PE I + D+WS G +L E+
Sbjct: 205 YTTRGGKIPI--------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 280 S 280
S
Sbjct: 245 S 245
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,395,573
Number of Sequences: 62578
Number of extensions: 514534
Number of successful extensions: 4140
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 1095
Number of HSP's gapped (non-prelim): 1917
length of query: 405
length of database: 14,973,337
effective HSP length: 101
effective length of query: 304
effective length of database: 8,652,959
effective search space: 2630499536
effective search space used: 2630499536
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)