Your job contains 1 sequence.
>015540
MRRAVKREAGSSSRGRVDDSSEQLLRTVKREKLSRNGADENLDNESTRTNQPQDTVQRRV
LRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEALLDITST
LVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVGLAVSPFLS
ACHGCSTMLGPMKTEVKQRKVVVRKKREKPTQTAQPEEVDDSEAVEKTDTDKNMTTMFEI
LRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPRNAPSADS
VMSGQVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRESSNALPVPQAEQASYNNTEGAS
RTTPIRKLSRNRGLVIREESVVEDSPEDDVAERSTRMLRCKRKII
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015540
(405 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026047 - symbol:AT1G51130 "AT1G51130" species... 963 6.6e-97 1
TAIR|locus:2091896 - symbol:AT3G20760 "AT3G20760" species... 807 2.2e-80 1
DICTYBASE|DDB_G0281991 - symbol:DDB_G0281991 "Non-structu... 231 1.8e-17 1
POMBASE|SPBC20F10.04c - symbol:nse4 "Smc5-6 complex non-S... 207 3.9e-15 1
ASPGD|ASPL0000073809 - symbol:AN4710 species:162425 "Emer... 157 1.4e-11 2
ZFIN|ZDB-GENE-050522-111 - symbol:nsmce4a "non-SMC elemen... 179 2.9e-11 1
UNIPROTKB|F1NV66 - symbol:NSMCE4A "Uncharacterized protei... 171 3.3e-10 1
UNIPROTKB|F1SEH7 - symbol:NSMCE4A "Uncharacterized protei... 166 9.9e-10 2
UNIPROTKB|Q2TBI1 - symbol:NSMCE4A "Non-structural mainten... 166 1.2e-09 1
CGD|CAL0005775 - symbol:orf19.4161 species:5476 "Candida ... 160 5.4e-09 1
UNIPROTKB|Q59SL1 - symbol:QRI2 "Putative uncharacterized ... 160 5.4e-09 1
UNIPROTKB|Q9NXX6 - symbol:NSMCE4A "Non-structural mainten... 154 2.8e-08 1
MGI|MGI:1913591 - symbol:Eid3 "EP300 interacting inhibito... 99 3.1e-06 2
UNIPROTKB|F1PL35 - symbol:NSMCE4A "Uncharacterized protei... 133 3.3e-06 1
UNIPROTKB|I3L6I0 - symbol:LOC100514406 "Uncharacterized p... 98 3.7e-06 2
RGD|1597206 - symbol:Eid3 "EP300 interacting inhibitor of... 95 1.2e-05 2
UNIPROTKB|A6QPC8 - symbol:EID3 "EP300-interacting inhibit... 121 0.00014 1
UNIPROTKB|A5LFW4 - symbol:EID3 "EP300-interacting inhibit... 93 0.00076 2
UNIPROTKB|Q8N140 - symbol:EID3 "EP300-interacting inhibit... 93 0.00088 2
>TAIR|locus:2026047 [details] [associations]
symbol:AT1G51130 "AT1G51130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR014854 Pfam:PF08743 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC079828 PANTHER:PTHR16140
eggNOG:NOG266777 EMBL:BT004096 EMBL:BT006087 IPI:IPI00548182
PIR:G96548 RefSeq:NP_175525.1 UniGene:At.37881 PaxDb:Q9C689
PRIDE:Q9C689 EnsemblPlants:AT1G51130.1 GeneID:841536
KEGG:ath:AT1G51130 TAIR:At1g51130 HOGENOM:HOG000070621
InParanoid:Q9C689 OMA:RRSFAQT PhylomeDB:Q9C689
ProtClustDB:CLSN2682941 Genevestigator:Q9C689 Uniprot:Q9C689
Length = 403
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 207/409 (50%), Positives = 274/409 (66%)
Query: 1 MRRAVKREAXXXXXXXXXXXXEQLLRTVKREKLSRNGADENLDNESTRTNQPQDTVQ-RR 59
MR+ VKRE+ + LR+VK+EK + AD +E + + + RR
Sbjct: 1 MRKTVKRESEATGGKREADDEPEKLRSVKKEKQRKTEADSVRPDEPPPPQEEEQGISDRR 60
Query: 60 VLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEALLDITS 119
+LRSKYL++ ++I D +DDL ++DS KF+ I+ V+NLH+ V+KPREQ+ADAEALLDI +
Sbjct: 61 ILRSKYLSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEALLDIAN 120
Query: 120 TLVTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVGLAV-SPF 178
TL++SVKSQS GV+P +FV+ L++ FG+ + L + AQ+S+ WKD+G AV S
Sbjct: 121 TLMSSVKSQSAHGVSPAEFVNALISGFGQGS---LGIDTDETAQVSLKWKDLGFAVCSTV 177
Query: 179 LSACHGCSTMLGPMXXXXXXXXXXXXXXXXXPTQTAQPEEVDDSEAVEKTDTDKNMTTMF 238
L +C GCSTMLGPM P + +P+EVDDS++ EKTDTDKNMT MF
Sbjct: 178 LVSC-GCSTMLGPMDTELKQRKRAPNRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTIMF 236
Query: 239 EILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPRNAPSA 298
IL +KK V+LE+L+LNRRSFAQTVENLFALSFL KDGRVEI V++ G H PRNAP A
Sbjct: 237 NILGKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSHFAMPRNAPDA 296
Query: 299 DSVMSGQVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRES---SNALPVPQAEQASYNN 355
+ VMSG+V Y+HFVFR DFKDWKLM ++VP GEELMPHR++ S++ P A AS +
Sbjct: 297 NVVMSGEVIYNHFVFRLDFKDWKLMSEMVPLGEELMPHRQTAVASSSCPAASAP-ASADF 355
Query: 356 TEGASRTTPIRKLSRNRGLVIRXXXXXXXXXXXXXXXRSTRMLRCKRKI 404
T+ ++TTPIRKLSRNRGLV++ TR RCKR++
Sbjct: 356 TQD-TQTTPIRKLSRNRGLVVQEETVVEDTPDKEGD--GTRR-RCKRRL 400
>TAIR|locus:2091896 [details] [associations]
symbol:AT3G20760 "AT3G20760" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR014854 Pfam:PF08743 EMBL:CP002686
PANTHER:PTHR16140 OMA:NRKSFAQ IPI:IPI00546829 RefSeq:NP_188712.4
UniGene:At.53407 PRIDE:F4JET1 EnsemblPlants:AT3G20760.1
GeneID:821624 KEGG:ath:AT3G20760 Uniprot:F4JET1
Length = 383
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 169/349 (48%), Positives = 232/349 (66%)
Query: 1 MRRAVKREAXXXXXXXXXXXXEQLLRT---VKREKLSRNG-ADENLDNESTRTNQPQDTV 56
MR +VK E ++ T VK+EK S+ A + + Q
Sbjct: 1 MRNSVKWETELTGDRSRRREADESSETPKIVKKEKRSKTVIASLRPQQPPIQEEEEQGIA 60
Query: 57 QRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEALLD 116
RR +RS+YLA+ KI+D +DDLT++DS KFN+I+ EV+NLH+ V+KPREQ+ADAEALLD
Sbjct: 61 DRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQIADAEALLD 120
Query: 117 ITSTLVTSVKSQS-NEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSINWKDVGLAV 175
+T+++V+SVKSQS + GV+P +FV+ L+ FG+++ L + N Q+S+ WKD+G V
Sbjct: 121 LTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTS---LRIDADENTQVSMKWKDLGFTV 177
Query: 176 -SPFLSACHGCSTMLGPMXXXXXXXXXXXXXXXXX-PTQTAQPEEVDDSEAVEKTDTDKN 233
S L +C GC+TM+GPM P +PEEVDD+EA +K+DTD N
Sbjct: 178 CSTVLVSC-GCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEAEKKSDTDNN 236
Query: 234 MTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPR 293
M MF ILR+ K V++E+L+LNR+SFAQT EN+FALSFLVKDGRVEI V+ +G H V PR
Sbjct: 237 MAVMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNGSHFVEPR 296
Query: 294 NAPSADSVMSGQVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRESSNA 342
NAP+A+ V+SG+V Y+HFV R+D+KDW+ M +V GEELMP RE+ A
Sbjct: 297 NAPAANLVLSGEVAYNHFVLRFDYKDWEPMSKMVAVGEELMPLRETKVA 345
>DICTYBASE|DDB_G0281991 [details] [associations]
symbol:DDB_G0281991 "Non-structural maintenance of
chromosomes element 4 homolog A" species:44689 "Dictyostelium
discoideum" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR014854 Pfam:PF08743
dictyBase:DDB_G0281991 EMBL:AAFI02000044 PANTHER:PTHR16140
eggNOG:COG5125 RefSeq:XP_640395.1 EnsemblProtists:DDB0205075
GeneID:8623350 KEGG:ddi:DDB_G0281991 InParanoid:Q54T56 OMA:PEEKDYQ
ProtClustDB:CLSZ2732380 Uniprot:Q54T56
Length = 367
Score = 231 (86.4 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 75/295 (25%), Positives = 121/295 (41%)
Query: 39 DENLDNESTRTNQPQDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLH 98
DE+ +++ Q Q +RR LR KY ++ + + +L S LK+ NL+
Sbjct: 41 DESPNSKKVVKKQQQTIGERRELRKKYRTLIQDVSGNKSELILPSSDGLLRSLKKADNLY 100
Query: 99 RDVQKPREQVADAEALLDITSTLVTSVKSQSNEGVTPTDFVSC-LLTMFGESNSNRLSSQ 157
+V + RE V D+E LL + S V+ V+ F S L+ + E +
Sbjct: 101 NNVLQAREAVLDSE-LLALASQF--GVEQAQKFKVSLNGFDSFGLVNRYKERLTFYTDEN 157
Query: 158 GNNNAQMS-INWKDVGLAVSPFLSACHGCSTMLGPMXXXXXXXXXXX---XXXXXXPTQT 213
NNN+ ++ W+ + M GP+ P
Sbjct: 158 NNNNSTINKTGWEKLSQLYHTHFHTVPDFDFMYGPINFEPEEKKVRAPRKLTQKDQPVGA 217
Query: 214 AQPEE--VDDSEAVEKTDTDKNMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSF 271
A+ E D S VE T + M + + + L+++ SFAQTVEN+F SF
Sbjct: 218 AKHAEKITDTSNQVESETTSSRVQVMKQYIEKNPGKSFIDLVVDETSFAQTVENIFYFSF 277
Query: 272 LVKDGRVEIAVNEHGFHLVAPRNAPSADSVMSGQVKYSHFVFRYDFKDWKLMKDV 326
L+KDG V+IA + ++ P S + +H V + DF W +KD+
Sbjct: 278 LLKDGHVKIAKDNEEM-IIQTTLPPEEKDYQSKNAQLTHSVVKLDFNTWNDLKDI 331
>POMBASE|SPBC20F10.04c [details] [associations]
symbol:nse4 "Smc5-6 complex non-SMC subunit Nse4"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006302 "double-strand break repair"
evidence=IGI;IMP] [GO:0030915 "Smc5-Smc6 complex" evidence=IDA]
[GO:0043596 "nuclear replication fork" evidence=TAS] [GO:0048478
"replication fork protection" evidence=IC] InterPro:IPR014854
Pfam:PF08743 PomBase:SPBC20F10.04c GO:GO:0007126 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0000790 GO:GO:0043596 GO:GO:0000724
GO:GO:0048478 GO:GO:0030915 PANTHER:PTHR16140 eggNOG:COG5125
EMBL:AB158548 RefSeq:NP_001018837.1 IntAct:Q6BDR8 STRING:Q6BDR8
EnsemblFungi:SPBC20F10.04c.1 GeneID:3361330 KEGG:spo:SPBC20F10.04c
OMA:NRKSFAQ OrthoDB:EOG4MD18R NextBio:20811400 Uniprot:Q6BDR8
Length = 300
Score = 207 (77.9 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 68/286 (23%), Positives = 128/286 (44%)
Query: 55 TVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEAL 114
++ +R LR +Y +++K+Q+ R +L ++ + +L V P E DA L
Sbjct: 3 SIDKRDLRKRYRNLINKVQESRLELVDEENNNLYETITTANDLFSSVDAPTEATLDA--L 60
Query: 115 LDITSTL-VTSVKSQSNEGVTPTDFVSCLLTMFGESNSNRLSSQGNNNAQMSIN--WKDV 171
L +T T+ + S+K++ P + L T + N +S N I+ W +
Sbjct: 61 L-LTKTVDLASIKARQLHIGRPKFNIE-LFTKNIKQFLNYPTSHSNVTRIQEIDTAWSRL 118
Query: 172 GLAVSPFLSACHGCSTMLGPMXXXXXXXXXXXXXXXX-XPTQTAQPEEVDDSE-AVEKTD 229
G S + M+GP+ P QP +++ ++ +
Sbjct: 119 GKLASNCEKQPASLNLMVGPLSFRKKERNIQRRERLQKAPNVLTQPTMLNERNITTQENN 178
Query: 230 TDKNMTTMFEILRRKKSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHL 289
T KN+ + +L+ + V I N +S+ QTVENLF +SFL K+G+ + NE G +
Sbjct: 179 TTKNVLHISRLLQAHQPVNFLKFITNPQSYPQTVENLFYVSFLFKEGKAALVENESGILM 238
Query: 290 VAPRNAPSADSVMSGQVKYSHFVFR-----YD--FKDWKLMKDVVP 328
+ R P+ D V++G+++ V Y+ K++ + + ++P
Sbjct: 239 LETRIPPTDDQVVAGEIRNIQLVLDMTMDLYENIIKEYNIKESIIP 284
>ASPGD|ASPL0000073809 [details] [associations]
symbol:AN4710 species:162425 "Emericella nidulans"
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA]
InterPro:IPR014854 Pfam:PF08743 EMBL:BN001303 PANTHER:PTHR16140
OMA:RLPILEP EnsemblFungi:CADANIAT00005720 HOGENOM:HOG000174004
Uniprot:C8VAW6
Length = 439
Score = 157 (60.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 40/94 (42%), Positives = 53/94 (56%)
Query: 247 VRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPRN--APSADSVMSG 304
V L + +N +SF Q+VENLF LSFLV+DG V I+ + G + P APS ++ G
Sbjct: 336 VPLANFCINPKSFGQSVENLFYLSFLVRDGTVGISTDSRGLPTLHPTKPLAPS-EAQRRG 394
Query: 305 QVKYSHFVFRYDFKDWKLMKDVVPAGEELMPHRE 338
K+ VF DF WK M D E ++PHRE
Sbjct: 395 VQKHQS-VFSLDFDTWKDMIDAYNIKECIIPHRE 427
Score = 70 (29.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 24/106 (22%), Positives = 46/106 (43%)
Query: 46 STRTNQP-QDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKP 104
ST+ P QD +RR +R + + D R++ + + + + RDV++
Sbjct: 73 STKYYDPDQDAAERRRVRKGLRDLTRDLNDSRNEYLQPGNTGIKDTFLKANEIFRDVKQT 132
Query: 105 REQVADAEALL---DIT-STLVTSVKSQSNEGVTPTDFVS-CLLTM 145
+ D+ L+ D++ T +S G+ +FVS C+ M
Sbjct: 133 SDATIDSRLLVNAADLSYKKAATLALGESGVGIDVDEFVSKCISFM 178
>ZFIN|ZDB-GENE-050522-111 [details] [associations]
symbol:nsmce4a "non-SMC element 4 homolog A (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0030915 "Smc5-Smc6
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR014854
Pfam:PF08743 ZFIN:ZDB-GENE-050522-111 HOVERGEN:HBG107841
PANTHER:PTHR16140 CTD:54780 EMBL:BC095037 IPI:IPI00487047
RefSeq:NP_001018359.1 UniGene:Dr.88456 GeneID:553544
KEGG:dre:553544 NextBio:20880287 Uniprot:Q504G2
Length = 346
Score = 179 (68.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 68/303 (22%), Positives = 129/303 (42%)
Query: 49 TNQPQDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQV 108
+ + D +RR +RSKY +++++Q R+D+ + K +L+E L +V++ RE
Sbjct: 48 SQEDDDPSRRREIRSKYRDLINEVQQNREDMLNPANNKLTDVLEEANKLFANVRQAREAA 107
Query: 109 ADAEALLDITSTLVTSVKSQSN-EGVT--PTDFVSCLLTMFGESN--SNRLSSQGNNNAQ 163
DA+ LL + + L SQ + EG + P+ F LL+ F + N + + GN
Sbjct: 108 LDAQ-LLVLATDLGKEKASQLHAEGSSFDPSAFAEHLLS-FMDLNRLEDESGTDGNLGGY 165
Query: 164 MSIN-WKDVGLAVSPFLSACHGCSTMLGPMXXXXXXXXXXXXXXXXXPTQTAQ---PEEV 219
+ W + MLG P++ + P ++
Sbjct: 166 LPGGAWLKLAKRAENCFRTAPAFHYMLGSFLAEPPPPRQRVERQRRVPSREEKRIMPTQL 225
Query: 220 DDSEAVEKTDTDKNMTTMFEILRR------KKSVRLESLILNRRSFAQTVENLFALSFLV 273
E + T+K + + L+R ++ + +++ SF++TVEN+F +SFL+
Sbjct: 226 KKMEESHQEATEKEVERILGCLQRYFKDDSEEPISYYEFVIDPNSFSRTVENIFHMSFLI 285
Query: 274 KDGRVEIAVNEHGFHLVAPRNAPSADSVMSGQVKYSH-FVFRYDFKDWKLMKDVVPAGEE 332
+DG + + E+G +AP + G H V + W+ + D +
Sbjct: 286 RDGLARMYL-ENGLPYIAP---VEEGEIQPGGAAIRHQCVISISQESWREIIDAFDIKQA 341
Query: 333 LMP 335
L+P
Sbjct: 342 LIP 344
>UNIPROTKB|F1NV66 [details] [associations]
symbol:NSMCE4A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] InterPro:IPR014854 Pfam:PF08743 PANTHER:PTHR16140
GeneTree:ENSGT00390000011476 OMA:ESEGIDQ EMBL:AADN02030999
IPI:IPI00583562 Ensembl:ENSGALT00000015470 Uniprot:F1NV66
Length = 386
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 62/277 (22%), Positives = 112/277 (40%)
Query: 39 DENLDNESTRTNQPQ------DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILK 92
D+ + ES R P D RR++R++Y ++ +Q R+D+ S + L+
Sbjct: 58 DDGEEPESERPRPPGSSEGGGDERHRRLIRNQYRELICSVQQNREDMLSSKSNRLTEALE 117
Query: 93 EVQNLHRDVQKPREQVADAEALLDITSTLVTSVKSQSNEGVTPTD---FVSCLLTMFG-- 147
E L V + RE DA+ L+ + S L ++ +T D F LLT G
Sbjct: 118 EANQLFSGVSRAREAALDAQFLV-LASNLGKEKANELRSEITTFDSLTFAEDLLTFMGIN 176
Query: 148 --ESNSNRLSSQGNNNAQMSIN-WKDVGLAVSPFLSACHGCSTMLGPMXXXXXXXXXXXX 204
E+ N S+ + + N W +G + MLG
Sbjct: 177 RTETEGNDSDSESMSGGYLPSNAWYKLGEEAEKYFRRAPSFHYMLGSFKSEPPMPRQRIE 236
Query: 205 XXXXXP---TQTAQPEEVDDSEAVEKTDTDKNMTTMFEILRRK------KSVRLESLILN 255
P + A P ++ E + T K + + +L+ + L+++
Sbjct: 237 RQRKAPGGEEKRAMPAQLKKMEESHQEATAKEVERILGLLQTHFRNDPCTPIFFFDLVVD 296
Query: 256 RRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAP 292
SFA+TVEN+F +SF+++DG + +++ ++ P
Sbjct: 297 PNSFARTVENIFHVSFILRDGLARLKLDDDKLPVIEP 333
>UNIPROTKB|F1SEH7 [details] [associations]
symbol:NSMCE4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR014854 Pfam:PF08743
GO:GO:2001022 GO:GO:0030915 PANTHER:PTHR16140 CTD:54780
GeneTree:ENSGT00390000011476 OMA:ESEGIDQ EMBL:CT990604
EMBL:CU694242 RefSeq:XP_001925740.1 UniGene:Ssc.17330
Ensembl:ENSSSCT00000011706 GeneID:100153999 KEGG:ssc:100153999
Uniprot:F1SEH7
Length = 377
Score = 166 (63.5 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 63/304 (20%), Positives = 126/304 (41%)
Query: 36 NGADENLDNESTRTNQPQDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQ 95
+ DE +D S R +R +Y A+++ +Q R+D+ S K +L+E
Sbjct: 60 DSGDELMDPASLEAETDHGLC--RQIRHQYRALINSVQQNREDILNA-SDKLTQVLEEAN 116
Query: 96 NLHRDVQKPREQVADAEALL---DITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGES--N 150
L V + RE V DA L+ D+ ++S N +V LLT G +
Sbjct: 117 TLFNGVSRAREAVLDAHFLVLASDLGKEKAKQLRSDLNS-FDMLRYVETLLTHMGVNPLE 175
Query: 151 SNRL-SSQGNNNAQMSI--NWKDVGLAVSPFLSACHGCSTMLGPMXXXXXX---XXXXXX 204
+ L + +++ + + +WK G + H +LG +
Sbjct: 176 AEELVRDEDSSDFEFIVYDSWKISGKTAENTFNKTHTFHFLLGSIQGEGPVPKPRIDRPK 235
Query: 205 XXXXXPTQTAQPEEVDDSEAVEKTDTDKNMTTMFEILRR------KKSVRLESLILNRRS 258
+ A P E+ E + T+K + + +L+ + +++ S
Sbjct: 236 KARMIEEKQAMPAELKRMEQSHQEATEKEVERILGLLQTYFQEDPDTPMSFFDFVVDPHS 295
Query: 259 FAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPRNAPSADSV-MSGQVKYSHFVFRYDF 317
F +TVEN+F +SF+++DG I +++ ++ P N +D + + Q++ + V +
Sbjct: 296 FPRTVENIFHVSFIIRDGFARIRLDQDRLPVIEPVNINESDGIDQNTQIR-NQAVIALSY 354
Query: 318 KDWK 321
++W+
Sbjct: 355 REWE 358
Score = 39 (18.8 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 29 KREKLSRNGADENLDNESTRTNQPQDTVQRR 59
+R + G D + D +R+ P V RR
Sbjct: 8 RRSEGRGRGRDPHRDRTRSRSRSPLSPVSRR 38
>UNIPROTKB|Q2TBI1 [details] [associations]
symbol:NSMCE4A "Non-structural maintenance of chromosomes
element 4 homolog A" species:9913 "Bos taurus" [GO:0030915
"Smc5-Smc6 complex" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR014854
Pfam:PF08743 GO:GO:0005634 GO:GO:0006281 GO:GO:0006310
GO:GO:0000781 GO:GO:2001022 HOVERGEN:HBG107841 GO:GO:0030915
PANTHER:PTHR16140 EMBL:BC110171 IPI:IPI00688387
RefSeq:NP_001033767.1 UniGene:Bt.30543 PRIDE:Q2TBI1
Ensembl:ENSBTAT00000025508 GeneID:527312 KEGG:bta:527312 CTD:54780
eggNOG:COG5125 GeneTree:ENSGT00390000011476 HOGENOM:HOG000088652
InParanoid:Q2TBI1 OMA:ESEGIDQ OrthoDB:EOG44TP8K NextBio:20874557
Uniprot:Q2TBI1
Length = 382
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 66/325 (20%), Positives = 133/325 (40%)
Query: 36 NGADENLDNESTRTNQPQDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQ 95
+ DE +D S + D R +R +Y A+++ +Q R+D+ S K +L+E
Sbjct: 62 DSGDEMIDPASLE--EETDPSLCRQIRHQYRALINSVQQNREDILNA-SDKLTEVLEEAN 118
Query: 96 NLHRDVQKPREQVADAEALL---DITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESN-- 150
L V + RE V DA L+ D+ ++S N +V LLT G +
Sbjct: 119 TLFNGVSRAREAVLDAHFLVLASDLGKEKAKQLRSDLNS-FDMLRYVETLLTHMGVNPLE 177
Query: 151 -SNRLSSQGNNNAQMSI--NWKDVGLAVSPFLSACHGCSTMLGPMXXXXXX---XXXXXX 204
+ + +++ + + +WK G + H +LG +
Sbjct: 178 AEELIRDEDSSDLEFIVYDSWKISGKTAENTFNKTHTFHFLLGSIQGECPVPKPRIERPR 237
Query: 205 XXXXXPTQTAQPEEVDDSEAVEKTDTDKNMTTMFEILRR------KKSVRLESLILNRRS 258
Q A P ++ E + T+K + + +L+ + +++ S
Sbjct: 238 KVRMIEEQQAMPAQLKRMEESHQEATEKEVERILGLLQTYFQEDPDTPMSFFDFVVDPHS 297
Query: 259 FAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPRNAPSADSVMSGQVKYSHFVFRYDFK 318
F +TVEN+F +SF+++DG I ++ ++ P N + +S + Q++ + + ++
Sbjct: 298 FPRTVENIFHVSFIIRDGFARIRLDRDRLPVIEPVNI-NEESGGNTQIR-NQAIIALSYR 355
Query: 319 DWKLMKDVVPAGEELMPHRESSNAL 343
DW+ + E ++ +S L
Sbjct: 356 DWEEIVRTFEISEPVITSSQSQQRL 380
>CGD|CAL0005775 [details] [associations]
symbol:orf19.4161 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR014854 Pfam:PF08743
CGD:CAL0005775 EMBL:AACQ01000151 EMBL:AACQ01000146
PANTHER:PTHR16140 eggNOG:COG5125 RefSeq:XP_712615.1
RefSeq:XP_712765.1 GeneID:3645594 GeneID:3645757
KEGG:cal:CaO19.11637 KEGG:cal:CaO19.4161 Uniprot:Q59SL1
Length = 371
Score = 160 (61.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 212 QTAQPEEVDDSEAVEKTDTDKNMTTMFEILRRK---KSVRLESLILNRRSFAQTVENLFA 268
+TA+ + D ++ +T + ++++ K V L +N RSF Q+VENLF
Sbjct: 208 KTARQVQASDISGNQEQNTANMVKSVYQTYIEKYDGNGVNLFKFFINPRSFGQSVENLFY 267
Query: 269 LSFLVKDGRVEIAVNEHGFHLVAPRNAPSADSVMSGQVKY-----SHFVFRYDFKDWKLM 323
SFLVKDGR+++ VN G + S+D + Q++ SH + +++K WK
Sbjct: 268 TSFLVKDGRLKLYVNNDGVPCI---QRVSSDEIREAQLESNKIFASHHIASFNYKAWKKY 324
Query: 324 KDVVPAGEELMPHRESSNALPVPQAEQASYNNTE 357
+ E + HR+ +P + YN+ E
Sbjct: 325 TQLYNIREAFLGHRDEPED-QMPPEDIIDYNDEE 357
>UNIPROTKB|Q59SL1 [details] [associations]
symbol:QRI2 "Putative uncharacterized protein QRI2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR014854 Pfam:PF08743
CGD:CAL0005775 EMBL:AACQ01000151 EMBL:AACQ01000146
PANTHER:PTHR16140 eggNOG:COG5125 RefSeq:XP_712615.1
RefSeq:XP_712765.1 GeneID:3645594 GeneID:3645757
KEGG:cal:CaO19.11637 KEGG:cal:CaO19.4161 Uniprot:Q59SL1
Length = 371
Score = 160 (61.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 212 QTAQPEEVDDSEAVEKTDTDKNMTTMFEILRRK---KSVRLESLILNRRSFAQTVENLFA 268
+TA+ + D ++ +T + ++++ K V L +N RSF Q+VENLF
Sbjct: 208 KTARQVQASDISGNQEQNTANMVKSVYQTYIEKYDGNGVNLFKFFINPRSFGQSVENLFY 267
Query: 269 LSFLVKDGRVEIAVNEHGFHLVAPRNAPSADSVMSGQVKY-----SHFVFRYDFKDWKLM 323
SFLVKDGR+++ VN G + S+D + Q++ SH + +++K WK
Sbjct: 268 TSFLVKDGRLKLYVNNDGVPCI---QRVSSDEIREAQLESNKIFASHHIASFNYKAWKKY 324
Query: 324 KDVVPAGEELMPHRESSNALPVPQAEQASYNNTE 357
+ E + HR+ +P + YN+ E
Sbjct: 325 TQLYNIREAFLGHRDEPED-QMPPEDIIDYNDEE 357
>UNIPROTKB|Q9NXX6 [details] [associations]
symbol:NSMCE4A "Non-structural maintenance of chromosomes
element 4 homolog A" species:9606 "Homo sapiens" [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:2001022 "positive
regulation of response to DNA damage stimulus" evidence=IMP]
[GO:0030915 "Smc5-Smc6 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR014854 Pfam:PF08743
GO:GO:0005634 GO:GO:0006281 GO:GO:0006310 EMBL:AL731566
GO:GO:0000781 GO:GO:2001022 HOVERGEN:HBG107841 GO:GO:0030915
PANTHER:PTHR16140 CTD:54780 HOGENOM:HOG000088652 OMA:ESEGIDQ
OrthoDB:EOG44TP8K EMBL:AK000010 EMBL:AK222487 EMBL:BC005212
EMBL:BC062427 EMBL:AF258584 IPI:IPI00014367 IPI:IPI00029356
RefSeq:NP_001161337.1 RefSeq:NP_060085.2 UniGene:Hs.258798
ProteinModelPortal:Q9NXX6 IntAct:Q9NXX6 STRING:Q9NXX6
PhosphoSite:Q9NXX6 DMDM:68565328 PaxDb:Q9NXX6 PeptideAtlas:Q9NXX6
PRIDE:Q9NXX6 Ensembl:ENST00000369017 Ensembl:ENST00000369023
GeneID:54780 KEGG:hsa:54780 UCSC:uc001lfs.3 UCSC:uc001lfu.2
GeneCards:GC10M123709 HGNC:HGNC:25935 HPA:HPA037459 MIM:612987
neXtProt:NX_Q9NXX6 PharmGKB:PA162398205 eggNOG:NOG266777
InParanoid:Q9NXX6 PhylomeDB:Q9NXX6 GenomeRNAi:54780 NextBio:57441
ArrayExpress:Q9NXX6 Bgee:Q9NXX6 CleanEx:HS_NSMCE4A
Genevestigator:Q9NXX6 GermOnline:ENSG00000107672 Uniprot:Q9NXX6
Length = 385
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 62/305 (20%), Positives = 124/305 (40%)
Query: 36 NGADENLDNESTRTNQPQDTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQ 95
+ DE +D S Q R +R +Y A+++ +Q R+D+ K +L+E
Sbjct: 62 DSGDEMMDPASLEAEADQGLC--RQIRHQYRALINSVQQNREDILNAGDK-LTEVLEEAN 118
Query: 96 NLHRDVQKPREQVADAEALL---DITSTLVTSVKSQSNEGVTPTDFVSCLLTMFGESN-- 150
L +V + RE V DA L+ D+ ++S + +V LLT G +
Sbjct: 119 TLFNEVSRAREAVLDAHFLVLASDLGKEKAKQLRSDLSS-FDMLRYVETLLTHMGVNPLE 177
Query: 151 -SNRLSSQGNNNAQMSI--NWKDVGLAVSPFLSACHGCSTMLGPMXXXXXXXXXXXXXXX 207
+ + + + + + +WK G + H +LG +
Sbjct: 178 AEELIRDEDSPDFEFIVYDSWKITGRTAENTFNKTHTFHFLLGSIYGECPVPKPRVDRPR 237
Query: 208 XXPT---QTAQPEEVDDSEAVEKTDTDKNMTTMFEIL----RRKKSVRLE--SLILNRRS 258
P + A P ++ E + T+K + + +L R + +++ S
Sbjct: 238 KVPVIQEERAMPAQLRRMEESHQEATEKEVERILGLLQTYFREDPDTPMSFFDFVVDPHS 297
Query: 259 FAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPR--NAPSADSVMSGQVKYSHFVFRYD 316
F +TVEN+F +SF+++DG I +++ ++ P N + + QV+ + +
Sbjct: 298 FPRTVENIFHVSFIIRDGFARIRLDQDRLPVIEPVSINEENEGFEHNTQVR-NQGIIALS 356
Query: 317 FKDWK 321
++DW+
Sbjct: 357 YRDWE 361
>MGI|MGI:1913591 [details] [associations]
symbol:Eid3 "EP300 interacting inhibitor of differentiation
3" species:10090 "Mus musculus" [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030915 "Smc5-Smc6 complex"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
InterPro:IPR014854 Pfam:PF08743 MGI:MGI:1913591 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0006281 GO:GO:0006351
GO:GO:0006310 GO:GO:0000781 CTD:493861 HOVERGEN:HBG107841
GO:GO:0030915 PANTHER:PTHR16140 EMBL:AK006438 EMBL:AK007194
EMBL:AK132745 EMBL:AK161275 EMBL:AK161307 EMBL:BC099545
IPI:IPI00229176 RefSeq:NP_079775.2 UniGene:Mm.443284 IntAct:Q3V124
PhosphoSite:Q3V124 PRIDE:Q3V124 GeneID:66341 KEGG:mmu:66341
UCSC:uc007gkc.1 NextBio:321379 CleanEx:MM_EID3
Genevestigator:Q3V124 Uniprot:Q3V124
Length = 375
Score = 99 (39.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 253 ILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPRNAPSADSVMSGQVKY--SH 310
+++ SF++TVEN+F +SF+++DG I +++ ++ P N D S Y
Sbjct: 289 VIDPNSFSRTVENIFYVSFIIRDGFARIRLDQDRLPILEPTNVSQVDDE-SDSYSYCRKQ 347
Query: 311 FVFRYDFKDWK 321
V +DWK
Sbjct: 348 GVISLSLQDWK 358
Score = 80 (33.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 26/97 (26%), Positives = 41/97 (42%)
Query: 54 DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEA 113
D + R +R +Y ++ +Q R+D+ S + L+E L V + RE DA+
Sbjct: 76 DREKCRKIRRQYRQLIYTVQQNREDIVNTASDTLSEALEEANVLFDGVSRTREAALDAQF 135
Query: 114 LLDITSTLVTSVKSQSNEGVT---PTDFVSCLLTMFG 147
L+ + S L Q N + P F LL G
Sbjct: 136 LV-LASDLGKEKAKQLNTDMNFFNPIAFCDLLLLFVG 171
>UNIPROTKB|F1PL35 [details] [associations]
symbol:NSMCE4A "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR014854 Pfam:PF08743 GO:GO:2001022 GO:GO:0030915
PANTHER:PTHR16140 GeneTree:ENSGT00390000011476 OMA:ESEGIDQ
EMBL:AAEX03015598 Ensembl:ENSCAFT00000019721 Uniprot:F1PL35
Length = 283
Score = 133 (51.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 53/269 (19%), Positives = 110/269 (40%)
Query: 74 DQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEALL---DITSTLVTSVKSQSN 130
+ R+D+ S K +L+E L V + RE V DA+ L+ D+ ++S N
Sbjct: 1 ENREDILNA-SDKLTEVLEEANTLFNGVSRAREAVLDAQFLVLASDLGKEKAKQLRSDLN 59
Query: 131 EGVTPTDFVSCLLTMFGESN---SNRLSSQGNNNAQMSI--NWKDVGLAVSPFLSACHGC 185
+V LLT G + + + +++ + + +WK G + H
Sbjct: 60 S-FDMLRYVETLLTHMGVNPLEAEELIRDEDSSDFEFIVYDSWKISGKTAENTFNKTHTF 118
Query: 186 STMLGPMXXXXXXXXXXXXXXXXXPT---QTAQPEEVDDSEAVEKTDTDKNMTTMFEIL- 241
+LG + PT + P+++ + E + T+K + + +L
Sbjct: 119 HFLLGSIQGEFPVPKPRSERPRKGPTTEEKKTMPDQLSEMEESHQEATEKEVERILGLLQ 178
Query: 242 ---RRKKSVRLE--SLILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPR--- 293
R + +++ SF +TVEN+F +SF+++DG I +++ ++
Sbjct: 179 TYFREDPDTPMSFFDFVVDPHSFPRTVENIFHVSFIIRDGFARIKLDQDRLPIIETEPVN 238
Query: 294 -NAPSADSVMSGQVKYSHFVFRYDFKDWK 321
N S + Q++ + + ++DW+
Sbjct: 239 INEESEGIDQNTQIR-NQGIIALSYRDWE 266
>UNIPROTKB|I3L6I0 [details] [associations]
symbol:LOC100514406 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR014854 Pfam:PF08743 PANTHER:PTHR16140
OMA:RLPILEP GeneTree:ENSGT00390000011476 EMBL:FP565370
EMBL:CU633317 RefSeq:XP_003126689.2 RefSeq:XP_003126690.1
Ensembl:ENSSSCT00000024747 Ensembl:ENSSSCT00000030740
GeneID:100514233 GeneID:100514406 KEGG:ssc:100514233
KEGG:ssc:100514406 Uniprot:I3L6I0
Length = 365
Score = 98 (39.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 29/118 (24%), Positives = 57/118 (48%)
Query: 210 PTQTAQPEEVDDSEAVEKTDTDKNMTTMFEILRRKKSVRLE--SLILNRRSFAQTVENLF 267
PT+ + + + EA EK + ++ + + R+ + +++ SF++TVEN+F
Sbjct: 235 PTKLRKLDLSSNQEATEK-EVERILGLLQTYFRKYPDTPVSYFEFVIDPNSFSRTVENIF 293
Query: 268 ALSFLVKDGRVEIAVNEHGFHLVAPRNAPSADSVMSGQVKYSHF----VFRYDFKDWK 321
+SF+++DG I +++ ++ P N + V G SH V +DWK
Sbjct: 294 YVSFIIRDGFARIRLDQDRLPILEPINM---NQVGEGNDPSSHGRKQGVISLSLQDWK 348
Score = 80 (33.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 54 DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEA 113
D + R +R +Y ++ +Q RDD+ S L+E L V + RE DA+
Sbjct: 65 DEEKCRSIRKQYRQLIYNVQQNRDDIVNTASDSLTEALEEANVLFDAVSRTREAALDAQF 124
Query: 114 LLDITSTLVTSVKSQSNEGVT 134
L+ + S L Q N ++
Sbjct: 125 LV-LASDLGKEKAKQLNSDMS 144
>RGD|1597206 [details] [associations]
symbol:Eid3 "EP300 interacting inhibitor of differentiation 3"
species:10116 "Rattus norvegicus" [GO:0000781 "chromosome,
telomeric region" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0030915 "Smc5-Smc6 complex" evidence=ISO;ISS]
[GO:0042802 "identical protein binding" evidence=ISO]
InterPro:IPR014854 Pfam:PF08743 RGD:1597206 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0006281 GO:GO:0006351
GO:GO:0006310 GO:GO:0000781 CTD:493861 HOVERGEN:HBG107841
GO:GO:0030915 PANTHER:PTHR16140 EMBL:BC097404 IPI:IPI00786828
RefSeq:NP_001037769.2 UniGene:Rn.206488 PRIDE:Q4V8G2 GeneID:691688
KEGG:rno:691688 UCSC:RGD:1597206 InParanoid:Q4V8G2 NextBio:743582
Genevestigator:Q4V8G2 Uniprot:Q4V8G2
Length = 387
Score = 95 (38.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 253 ILNRRSFAQTVENLFALSFLVKDGRVEIAVNEHGFHLVAPRNAPSADSVMSGQVKY--SH 310
+++ SF++TVEN+F +SF+++DG I +++ ++ P N D + Y
Sbjct: 301 VIDPNSFSRTVENIFYVSFIIRDGFARIRLDQDRLPILEPTNVNQVDEE-NDSCSYCRKQ 359
Query: 311 FVFRYDFKDWK 321
V +DWK
Sbjct: 360 GVISLSLQDWK 370
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 54 DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEA 113
D + R +R +Y ++ +Q R+D+ S L+E L V + RE DA+
Sbjct: 88 DREKCRSIRRQYRQLIYTVQQNREDIVNTASDSLTEALEEANVLFDGVSRTREAALDAQF 147
Query: 114 LLDITSTLVTSVKSQSNEGVTPTDFVS-C-LLTMF 146
L+ + S L Q N ++ + V+ C LL +F
Sbjct: 148 LV-LASDLGKEKAKQLNSDMSFFNHVAFCELLLVF 181
>UNIPROTKB|A6QPC8 [details] [associations]
symbol:EID3 "EP300-interacting inhibitor of differentiation
3" species:9913 "Bos taurus" [GO:0030915 "Smc5-Smc6 complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR014854 Pfam:PF08743 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0006310
GO:GO:0000781 EMBL:BC149257 IPI:IPI00686272 RefSeq:NP_001093782.1
UniGene:Bt.91633 GeneID:507232 KEGG:bta:507232 CTD:493861
HOVERGEN:HBG107841 NextBio:20867968 GO:GO:0030915 PANTHER:PTHR16140
Uniprot:A6QPC8
Length = 379
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 56/286 (19%), Positives = 110/286 (38%)
Query: 54 DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEA 113
D + R +R +Y ++ +Q RDD+ S L+E L V + RE D++
Sbjct: 79 DEEKCRSIRKQYRQLIYTVQQNRDDIVNTASDSLTEALEEANVLFDAVSRTREAALDSQF 138
Query: 114 LL---DITSTLVTSVKSQSN--EGVTPTDFVSCLLTM-FGESNSNRLSSQGNNNAQMSIN 167
L+ D+ + S N V DF+ + + + E + + ++N +S
Sbjct: 139 LVLASDLGKEKAKHLNSDMNFFNQVAFCDFLFIFVGLNWMEDDERDPLNNCDDNIALSF- 197
Query: 168 WKDVGLAVSPFLSACHGCSTMLGPMXXXXXXXX---------XXXXXXXXXPTQTAQPEE 218
W+ V + +S + G PT+ + +
Sbjct: 198 WETVQKEATSCISQAETFHFLFGSFKPESAARKPRRNHRRKVQKMEENGVMPTKLRKLDL 257
Query: 219 VDDSEAVEKTDTDKNMTTMFEILRRKKSVRLE--SLILNRRSFAQTVENLFALSFLVKDG 276
+ EA EK + ++ + + R+ + +++ SF++TVEN+F +SF+++DG
Sbjct: 258 SGNQEATEK-EVERILGLLQTYFRKYPDTPVSYFEFVIDPNSFSRTVENIFYVSFIIRDG 316
Query: 277 RVEIAVNEHGFHLVAPRNAPSADSVMSGQV-KYSHFVFRYDFKDWK 321
I +++ ++ P N A V +DWK
Sbjct: 317 FARIRLDQDRLPILEPININLAGEGNDPSFHSRKQGVISLSLQDWK 362
>UNIPROTKB|A5LFW4 [details] [associations]
symbol:EID3 "EP300-interacting inhibitor of differentiation
3" species:9541 "Macaca fascicularis" [GO:0030915 "Smc5-Smc6
complex" evidence=ISS] InterPro:IPR014854 Pfam:PF08743
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006281
GO:GO:0006351 GO:GO:0006310 GO:GO:0000781 HOVERGEN:HBG107841
GO:GO:0030915 PANTHER:PTHR16140 EMBL:AB168632 Uniprot:A5LFW4
Length = 371
Score = 93 (37.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 230 TDKNMTTMFEILR---RK---KSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVN 283
T+KN+ + +L+ RK V +++ SF++TVEN+F +SF+V+DG I ++
Sbjct: 255 TEKNVERILGLLQTYFRKYPDTPVSYFEFVIDPNSFSRTVENIFYVSFIVRDGFARIRLD 314
Query: 284 EHGFHLVAPRN 294
E ++ P N
Sbjct: 315 EDRLPILEPMN 325
Score = 63 (27.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 54 DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEA 113
D + R +R +Y ++ ++ R D+ + L+E L V + RE DA+
Sbjct: 71 DEEKCRSIRRQYRQLMYCVRQNRGDIVNSANNSLTEALEEANVLFDGVSRTREAALDAQF 130
Query: 114 LLDITSTLVTSVKSQSNEGVTPTDFVS-C-LLTMFGESN 150
L+ + S L Q N + + ++ C L +FG N
Sbjct: 131 LV-MASDLGKEKAKQLNSDLNFFNQLAFCDFLFLFGGLN 168
>UNIPROTKB|Q8N140 [details] [associations]
symbol:EID3 "EP300-interacting inhibitor of differentiation
3" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR014854 Pfam:PF08743 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006281 EMBL:CH471054 GO:GO:0006351
GO:GO:0006310 GO:GO:0000781 CleanEx:HS_EID3 CTD:493861
HOVERGEN:HBG107841 GO:GO:0030915 PANTHER:PTHR16140 EMBL:AK098698
EMBL:BC027612 IPI:IPI00383858 RefSeq:NP_001008395.1
UniGene:Hs.659857 ProteinModelPortal:Q8N140 IntAct:Q8N140
MINT:MINT-1443977 PhosphoSite:Q8N140 DMDM:74728487 PRIDE:Q8N140
DNASU:493861 Ensembl:ENST00000527879 GeneID:493861 KEGG:hsa:493861
UCSC:uc001tkw.3 GeneCards:GC12P104697 HGNC:HGNC:32961 MIM:612986
neXtProt:NX_Q8N140 PharmGKB:PA162384552 OMA:RLPILEP NextBio:111782
Bgee:Q8N140 Genevestigator:Q8N140 Uniprot:Q8N140
Length = 333
Score = 93 (37.8 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 230 TDKNMTTMFEILR---RK---KSVRLESLILNRRSFAQTVENLFALSFLVKDGRVEIAVN 283
T+KN+ + +L+ RK V +++ SF++TVEN+F +SF+V+DG I ++
Sbjct: 217 TEKNVERILGLLQTYFRKYPDTPVSYFEFVIDPNSFSRTVENIFYVSFIVRDGFARIRLD 276
Query: 284 EHGFHLVAPRN 294
E ++ P N
Sbjct: 277 EDRLPILEPMN 287
Score = 61 (26.5 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 54 DTVQRRVLRSKYLAVLSKIQDQRDDLTRVDSKKFNTILKEVQNLHRDVQKPREQVADAEA 113
D + R +R +Y ++ ++ R+D+ + L+E L V + RE DA
Sbjct: 33 DEEKCRSIRRQYRQLMYCVRQNREDIVSSANNSLTEALEEANVLFDGVSRTREAALDARF 92
Query: 114 LL---DITSTLVTSVKSQSN--EGVTPTDFVSCLLTM-FGESNSNRLSSQGNNNAQMSIN 167
L+ D+ + S N + DF+ + + + E + ++LS ++ A +S
Sbjct: 93 LVMASDLGKEKAKQLNSDMNFFNQLAFCDFLFLFVGLNWMEGDPDKLSDCDDSIA-LSF- 150
Query: 168 WKDV 171
WK +
Sbjct: 151 WKAI 154
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.128 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 405 361 0.00082 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 606 (64 KB)
Total size of DFA: 209 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.05u 0.13s 33.18t Elapsed: 00:00:02
Total cpu time: 33.06u 0.13s 33.19t Elapsed: 00:00:02
Start: Sat May 11 07:19:10 2013 End: Sat May 11 07:19:12 2013