Query 015542
Match_columns 405
No_of_seqs 150 out of 1090
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 14:26:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015542.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015542hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xfg_A Endoglucanase 1; hydrol 100.0 2E-95 7E-100 742.2 28.7 368 1-402 87-463 (466)
2 1ks8_A Endo-B-1,4-glucanase; c 100.0 2.2E-95 7E-100 738.0 25.0 365 1-401 65-431 (433)
3 1ia6_A Cellulase CEL9M; cellul 100.0 1E-94 3.5E-99 734.1 29.1 357 1-403 67-431 (441)
4 1tf4_A T. fusca endo/EXO-cellu 100.0 4.2E-94 1.4E-98 754.0 29.7 369 1-401 66-443 (605)
5 2yik_A Endoglucanase; hydrolas 100.0 4.2E-94 1.5E-98 754.7 24.1 370 1-401 127-515 (611)
6 1g87_A Endocellulase 9G; endog 100.0 2.3E-92 7.7E-97 741.3 30.5 366 1-401 66-439 (614)
7 1clc_A Endoglucanase CELD; EC: 100.0 5.8E-82 2E-86 666.4 28.4 349 1-402 199-565 (639)
8 3gzk_A Cellulase; fold from GH 100.0 1.9E-82 6.4E-87 658.1 22.2 350 1-403 154-536 (537)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 1.2E-80 4.1E-85 654.2 25.7 373 1-401 187-607 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 4.8E-52 1.6E-56 429.4 19.1 332 1-397 153-563 (586)
11 3k7x_A LIN0763 protein; Q92DQ0 97.0 0.009 3.1E-07 58.2 13.9 137 9-176 95-242 (349)
12 2gz6_A N-acetyl-D-glucosamine 96.8 0.088 3E-06 51.3 19.3 116 34-176 21-144 (388)
13 2gz6_A N-acetyl-D-glucosamine 96.6 0.076 2.6E-06 51.8 17.1 144 1-175 51-200 (388)
14 3gt5_A N-acetylglucosamine 2-e 94.8 0.05 1.7E-06 53.8 7.4 139 4-175 53-201 (402)
15 2zzr_A Unsaturated glucuronyl 94.2 0.21 7.2E-06 49.3 10.2 128 21-176 130-275 (397)
16 1fp3_A N-acyl-D-glucosamine 2- 94.2 0.3 1E-05 47.9 11.3 120 26-175 15-150 (402)
17 2ahf_A Unsaturated glucuronyl 92.9 0.44 1.5E-05 46.7 9.9 134 16-176 98-250 (377)
18 3gt5_A N-acetylglucosamine 2-e 92.8 0.7 2.4E-05 45.4 11.3 119 26-176 11-141 (402)
19 1nc5_A Hypothetical protein YT 92.3 2.4 8.1E-05 41.2 14.4 73 87-177 43-117 (373)
20 3k11_A Putative glycosyl hydro 91.4 2.6 8.8E-05 42.1 13.5 129 8-164 268-415 (445)
21 1fp3_A N-acyl-D-glucosamine 2- 90.1 0.7 2.4E-05 45.2 8.0 79 88-176 250-343 (402)
22 3k7x_A LIN0763 protein; Q92DQ0 89.4 0.99 3.4E-05 43.6 8.3 71 87-176 48-121 (349)
23 2zbl_A Putative isomerase; N-a 89.3 0.77 2.6E-05 45.4 7.6 143 2-175 50-200 (421)
24 3pmm_A Putative cytoplasmic pr 89.1 17 0.00059 35.2 18.3 114 24-176 25-139 (382)
25 3k11_A Putative glycosyl hydro 87.1 4.9 0.00017 40.1 11.8 76 88-175 85-173 (445)
26 1nc5_A Hypothetical protein YT 82.6 6.1 0.00021 38.2 10.0 95 7-126 214-314 (373)
27 2ahf_A Unsaturated glucuronyl 81.6 11 0.00038 36.6 11.4 142 5-175 154-313 (377)
28 2zzr_A Unsaturated glucuronyl 77.6 24 0.00083 34.5 12.4 143 4-175 178-338 (397)
29 2zbl_A Putative isomerase; N-a 77.0 4.7 0.00016 39.6 7.2 115 26-175 13-138 (421)
30 3pmm_A Putative cytoplasmic pr 75.5 10 0.00036 36.8 9.1 88 8-126 235-332 (382)
31 3e6u_A LANC-like protein 1; al 74.6 17 0.00059 35.5 10.6 115 22-176 248-364 (411)
32 2p0v_A Hypothetical protein BT 58.8 57 0.002 32.7 10.5 94 25-126 205-319 (489)
33 2g0d_A Nisin biosynthesis prot 47.3 73 0.0025 30.6 9.2 71 88-174 282-352 (409)
34 1r76_A Pectate lyase; A-helica 46.6 84 0.0029 30.7 9.3 85 24-127 171-258 (408)
35 2v8i_A Pectate lyase; periplas 31.9 29 0.00098 34.6 3.3 24 152-175 431-454 (543)
36 1gxm_A Pectate lyase; mechanis 26.8 2.2E+02 0.0077 26.9 8.4 84 24-127 93-182 (332)
37 2kmg_A KLCA; ARDB, spectroscop 25.4 33 0.0011 28.5 2.1 87 35-128 40-133 (142)
No 1
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=2e-95 Score=742.24 Aligned_cols=368 Identities=36% Similarity=0.589 Sum_probs=325.2
Q ss_pred CchhHHHHHHHHHHhhhhhh--hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcC
Q 015542 1 MAFTTTLLSWSVIEFGSSMQ--NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVS 78 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~~~~--n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~ 78 (405)
||||+++|+|+++||++.|+ |++||||||||||+|||||| |+++|.||+|||++..||.+|++||+++.+||+|.++
T Consensus 87 ~a~t~~~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~-~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~ 165 (466)
T 2xfg_A 87 MSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKC-HPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVD 165 (466)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHT-CSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEE
T ss_pred cHHHHHHHHHHHHHhHHHHhcCCCchHHHHHHHHHHHHHHHh-ccCCCcEEEEeCCCCccccccCCcccCCCCCceeEec
Confidence 79999999999999999996 89999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchHHHHHHHH
Q 015542 79 TQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASW 158 (405)
Q Consensus 79 ~~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De~~wAAae 158 (405)
.++|+|++++++|||||+||||||++||+||++||++||++|+||++||+.|... ..+++|+|++++.||++|||+|
T Consensus 166 ~~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~---~~~~~Y~s~s~~~DEl~WAAaw 242 (466)
T 2xfg_A 166 RSSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYT---AANGFYNSWSGFYDELSWAAVW 242 (466)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCC---TTTTTSCCSSCSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCC---ccccccCCCCCCchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998432 3578999988999999999999
Q ss_pred HHHHcCChhHHHHHHHcccccCCC------CCCCccCccchhhHHHHhhcccccccch-HHHHHHHHHHHHHHHHhCCCC
Q 015542 159 LHRASQNSSYLAYIQSNGHILGAD------DDDYSFSWDDKRAGTKVLLSKGFLEKNT-QEFQLYKAHSDNYICSLIPGS 231 (405)
Q Consensus 159 Ly~aTg~~~Yl~~~~~~~~~~~~~------~~~~~~~Wd~~~~~~~~ll~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~ 231 (405)
||++|||++|+++++.+...++.. .....|+||++..++++||++. .+++ ..++.++..++.+++ +.
T Consensus 243 Ly~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~~~~~~~~~~~~~~~~~~----~~ 316 (466)
T 2xfg_A 243 LYLATNDSSYLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARI--KNDNGKYKEAIERHLDWWTT----GY 316 (466)
T ss_dssp HHHHHCCHHHHHHHHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHH--HCSSCHHHHHHHHHHHHHTT----CB
T ss_pred HHHHhCCHHHHHHHHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHh----cc
Confidence 999999999999999986554321 2245799999999999988763 2223 445555655555443 33
Q ss_pred CCCcccccCCCccccCCCChHHHHHHHHHHHHHHhhhhhcCCCccccCCCccCHHHHHHHHHhcchhhcCCCCCCcceee
Q 015542 232 SSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMV 311 (405)
Q Consensus 232 ~~~~~~~t~~g~~~~~~wg~~~~~~n~a~l~~~~a~~l~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyV~ 311 (405)
+..++++||+|+.|...||++||++|.+||+++|++++. |+ ..+.++|+++|++|||||||+| ++||||
T Consensus 317 ~~~~~~~tp~Gl~~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~Syvv 385 (466)
T 2xfg_A 317 NGERITYTPKGLAWLDQWGSLRYATTTAFLACVYSDWEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVV 385 (466)
T ss_dssp TTBCCCBCTTSCBCCCSSSHHHHHHHHHHHHHHHHTCTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBT
T ss_pred CCCccccCCccccccCCCCchHHHHHHHHHHHHHHHhcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEe
Confidence 334789999999999999999999999999999988542 31 2357899999999999999999 999999
Q ss_pred ecCCCCCCCccccCCCCCCCCCCCCccccCCCcccccCCCCCCCCcccceecCCCCCCCCccCcCccccccccccCchHH
Q 015542 312 GFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPF 391 (405)
Q Consensus 312 G~G~~~p~~pHHr~s~~~~~~~~p~~~~c~~g~~~~~~~~~~~~~~~GalvGGPn~~d~y~D~~~~y~~nE~aid~NA~~ 391 (405)
|||+|+|++||||+++||.. +..++|.|||++|+|+||||||..|+|.|+|.+|++|||||||||+|
T Consensus 386 G~G~~~p~~pHHR~ss~~~~-------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~ 452 (466)
T 2xfg_A 386 GFGENPPKRPHHRTAHGSWA-------------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGF 452 (466)
T ss_dssp TSSSSCCSCCSCHHHHTCSS-------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHH
T ss_pred ccCCCCCCCCcCchhccCcc-------------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHH
Confidence 99999999999999988753 13456889999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccC
Q 015542 392 VGAVAFFSSKT 402 (405)
Q Consensus 392 ~~~la~l~~~~ 402 (405)
|++||+|+..-
T Consensus 453 v~~la~l~~~~ 463 (466)
T 2xfg_A 453 VGLLAKMYKLY 463 (466)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99999998753
No 2
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=2.2e-95 Score=738.04 Aligned_cols=365 Identities=42% Similarity=0.725 Sum_probs=326.2
Q ss_pred CchhHHHHHHHHHHhhhhhh--hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcC
Q 015542 1 MAFTTTLLSWSVIEFGSSMQ--NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVS 78 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~~~~--n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~ 78 (405)
||||+++|+|+++||++.|+ |++||||||||||+|||||| |+.+|.||+|||++..||.+|++||+++.+|++|+++
T Consensus 65 ~a~t~~~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~-~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~ 143 (433)
T 1ks8_A 65 MAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKA-HTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKID 143 (433)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHH-CCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEEC
T ss_pred hHHHHHHHHHHHHHhHHhhhcCCchHHHHHHHHHHHHHHHHh-ccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeecc
Confidence 79999999999999999996 89999999999999999999 9899999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchHHHHHHHH
Q 015542 79 TQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASW 158 (405)
Q Consensus 79 ~~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De~~wAAae 158 (405)
.++|||++++++|||||+||||||++||+||++||++||++|+||++||+.|.++++. .+++|+| +++.||++|||+|
T Consensus 144 ~~~pgs~~a~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~-~~~~Y~s-s~~~DE~~WAAa~ 221 (433)
T 1ks8_A 144 TSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITD-ARNFYAS-ADYRDELVWAAAW 221 (433)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGG-GGGTSCC-CCTHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCc-CCCCCCC-CCcccHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999998766443 5689999 9999999999999
Q ss_pred HHHHcCChhHHHHHHHcccccCCCCCCCccCccchhhHHHHhhcccccccchHHHHHHHHHHHHHHHHhCCCCCCCcccc
Q 015542 159 LHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSSSFQAQY 238 (405)
Q Consensus 159 Ly~aTg~~~Yl~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 238 (405)
||++|||++|++++++++..++.......|+|+++..+++++|++. ...+ .+++.++.+++.++. .+.+
T Consensus 222 Ly~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~~----~~~~~~~~~~~~~~~-----~~~~ 290 (433)
T 1ks8_A 222 LYRATNDNTYLNTAESLYDEFGLQNWGGGLNWDSKVSGVQVLLAKL--TNKQ----AYKDTVQSYVNYLIN-----NQQK 290 (433)
T ss_dssp HHHHHCCHHHHHHHHHHHHHTTGGGSCCCCCSSCCHHHHHHHHHHH--HCCH----HHHHHHHHHHHHHHH-----TSCB
T ss_pred HHHHhCCHHHHHHHHHHHHhcCcCcCcCCcCccchhhHHHHHHhhc--cChH----HHHHHHHHHHHHHHh-----cCCc
Confidence 9999999999999998876554333456899999999999888753 2233 455555555555542 3457
Q ss_pred cCCCccccCCCChHHHHHHHHHHHHHHhhhhhcCCCccccCCCccCHHHHHHHHHhcchhhcCCCCCCcceeeecCCCCC
Q 015542 239 TAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYP 318 (405)
Q Consensus 239 t~~g~~~~~~wg~~~~~~n~a~l~~~~a~~l~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyV~G~G~~~p 318 (405)
||+|+.|...||++++++|.+|++++++++. .+.++|+++|++|||||||+| ++|||||||+|+|
T Consensus 291 tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~-------------~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p 355 (433)
T 1ks8_A 291 TPKGLLYIDMWGTLRHAANAAFIMLEAAELG-------------LSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPP 355 (433)
T ss_dssp CTTSCBCCCSTTHHHHHHHHHHHHHHHHHTT-------------SSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCC
T ss_pred CCCCceeecCCchhHHHHHHHHHHHHHHhcC-------------CCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCC
Confidence 8999999889999999999999999987641 357899999999999999998 7899999999999
Q ss_pred CCccccCCCCCCCCCCCCccccCCCcccccCCCCCCCCcccceecCCCCCCCCccCcCccccccccccCchHHHHHHHHh
Q 015542 319 QHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFVGAVAFF 398 (405)
Q Consensus 319 ~~pHHr~s~~~~~~~~p~~~~c~~g~~~~~~~~~~~~~~~GalvGGPn~~d~y~D~~~~y~~nE~aid~NA~~~~~la~l 398 (405)
++||||+++||.. | ..|..| +++++.|||++|+|+||||||..|+|+|+|.+|++|||||||||+||++||+|
T Consensus 356 ~~pHHR~s~~~~~---~--~~c~~~--~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l 428 (433)
T 1ks8_A 356 TRPHHRSSSCPPA---P--ATCDWN--TFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAAL 428 (433)
T ss_dssp SCCSCHHHHCCCT---T--SCCSHH--HHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHH
T ss_pred CCCcchhhcCCCc---c--cccccc--ccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHH
Confidence 9999999999864 2 478655 58889999999999999999999999999999999999999999999999999
Q ss_pred hcc
Q 015542 399 SSK 401 (405)
Q Consensus 399 ~~~ 401 (405)
...
T Consensus 429 ~~~ 431 (433)
T 1ks8_A 429 VAL 431 (433)
T ss_dssp HHT
T ss_pred Hhc
Confidence 764
No 3
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=1e-94 Score=734.09 Aligned_cols=357 Identities=32% Similarity=0.546 Sum_probs=315.4
Q ss_pred CchhHHHHHHHHHHhhhhhh--hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcce-EEc
Q 015542 1 MAFTTTLLSWSVIEFGSSMQ--NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNV-YKV 77 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~~~~--n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~-~~~ 77 (405)
||||+++|+|+++||++.|+ +++||||||||||+|||||| |+++|.||+|||++..||.+|++||+|+.+|++ |.+
T Consensus 67 ~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~D~llk~-~~~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~ 145 (441)
T 1ia6_A 67 QGYSAAILGWSLYEFKESFDATGNTTKMLQQLKYFTDYFLKS-HPNSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKA 145 (441)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHT-CCSTTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEE
T ss_pred hHHHHHHHHHHHHHhHHHHhhcCcHHHHHHHHHHHHHHHHHh-ccCCCcEEEEeCCCCccccccCChhhCCCCCceeeEe
Confidence 79999999999999999995 89999999999999999999 999999999999999999999999999999999 999
Q ss_pred CCCCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchHHHHHHH
Q 015542 78 STQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGAS 157 (405)
Q Consensus 78 ~~~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De~~wAAa 157 (405)
+.++|+|++++++|||||+||||||++||+||++||++||++|+||++||+.+. .+++|+| +++.||++|||+
T Consensus 146 ~~~~p~sd~a~~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~------~~~~Y~s-s~~~DE~~WAAa 218 (441)
T 1ia6_A 146 DPSSPASDILSETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN------GQSFYQA-TSFGDDLAWAAT 218 (441)
T ss_dssp BTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC------CTTTSCC-CCSHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC------CCCCCCC-CCchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998643 4689999 999999999999
Q ss_pred HHHHHcCChhHHHHHHHcccccC---C--CCCCCccCccchhhHHHHhhcccccccchHHHHHHHHHHHHHHHHhCCCCC
Q 015542 158 WLHRASQNSSYLAYIQSNGHILG---A--DDDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSS 232 (405)
Q Consensus 158 eLy~aTg~~~Yl~~~~~~~~~~~---~--~~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 232 (405)
|||++|||++|+++++++..... . ......|+||++..++.+||++. .+++. +++.++.+++.++
T Consensus 219 ~Ly~aTgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~~~----~~~~~~~~~~~~~---- 288 (441)
T 1ia6_A 219 WLYTATNDSTYITDAEQFITLGNTMNENKMQDKWTMCWDDMYVPAALRLAQI--TGKQI----YKDAIEFNFNYWK---- 288 (441)
T ss_dssp HHHHHHCCTHHHHHHHHHTTC------CGGGCSSCSSSSCCHHHHHHHHHHH--HCCHH----HHHHHHHHHHHHH----
T ss_pred HHHHHhCCHHHHHHHHHHHhhhhhcccccccCCCcCCccchHHHHHHHHHhc--cCcHH----HHHHHHHHHHHHH----
Confidence 99999999999999998753210 0 01345799999999999888763 23333 4444444443332
Q ss_pred CCcccccCCCccccCCCChHHHHHHHHHHHHHHhhhhhcCCCccccCCCccCHHHHHHHHHhcchhhcCCCCCCcceeee
Q 015542 233 SFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVG 312 (405)
Q Consensus 233 ~~~~~~t~~g~~~~~~wg~~~~~~n~a~l~~~~a~~l~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyV~G 312 (405)
.++++||+|+.|...||+++|++|.+||+++|++++ ..++|+++|++|||||||+||+++|||||
T Consensus 289 -~~~~~tp~Gl~~~~~WGs~~~~~~~a~l~~~~~~~~--------------~~~~y~~~A~~qldYiLG~NP~~~SyvvG 353 (441)
T 1ia6_A 289 -TQVTTTPGGLKWLSNWGVLRYAAAESMVMLVYCKQN--------------PDQSLLDLAKKQVDYILGDNPANMSYIIG 353 (441)
T ss_dssp -HTSCBCTTSCBCCCSTTHHHHHHHHHHHHHHHHHHS--------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTT
T ss_pred -hhcccCCCCceecCCcchHHHHHHHHHHHHHHHhhc--------------CHHHHHHHHHHHHHHhcCCCCCCceeEEe
Confidence 256789999999899999999999999999998753 35799999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCccccCCCcccccCCCCCCCCcccceecCCCCCCCCccCcCccccccccccCchHHH
Q 015542 313 FGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFV 392 (405)
Q Consensus 313 ~G~~~p~~pHHr~s~~~~~~~~p~~~~c~~g~~~~~~~~~~~~~~~GalvGGPn~~d~y~D~~~~y~~nE~aid~NA~~~ 392 (405)
||+|+|++||||+++|+.. ++.+.|.|||++|+|+||||||..|+|+|+|.+|++|||||||||+||
T Consensus 354 ~G~~~p~~pHHR~s~~~~~-------------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v 420 (441)
T 1ia6_A 354 YGSNWCIHPHHRAANGYTY-------------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLV 420 (441)
T ss_dssp SSSSCCSCCBCHHHHCCCC-------------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHH
T ss_pred cCCCCCCCCcChhhccCCc-------------cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHH
Confidence 9999999999999988742 235678899999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCC
Q 015542 393 GAVAFFSSKTT 403 (405)
Q Consensus 393 ~~la~l~~~~~ 403 (405)
++||+|...-+
T Consensus 421 ~~la~l~~~~~ 431 (441)
T 1ia6_A 421 GVLAGAIKFFG 431 (441)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhcC
Confidence 99999987543
No 4
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=4.2e-94 Score=753.96 Aligned_cols=369 Identities=41% Similarity=0.704 Sum_probs=331.3
Q ss_pred CchhHHHHHHHHHHhhhhhh--hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcC
Q 015542 1 MAFTTTLLSWSVIEFGSSMQ--NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVS 78 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~~~~--n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~ 78 (405)
||||+++|+|+++||++.|+ |++||||||||||+|||||| |++++.||.|||++..||.+|++||+++.+||+|.++
T Consensus 66 ~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk~-~~~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~ 144 (605)
T 1tf4_A 66 MAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKA-HPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVD 144 (605)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHT-CSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEB
T ss_pred hHHHHHHHHHHHHHhHHHHhhcCCcccHHHHHHHHHHHHHHh-ccCCCeEEEEeCCCCcCccccCChhhCCCCCceeEec
Confidence 79999999999999999995 89999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchHHHHHHHH
Q 015542 79 TQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASW 158 (405)
Q Consensus 79 ~~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De~~wAAae 158 (405)
.++|+|++++++|||||+||||||++||+||++||++||++|+||++||+.|.++.. .+++|+|++++.||++|||+|
T Consensus 145 ~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~--~~~~Y~s~s~~~DEl~WAAaw 222 (605)
T 1tf4_A 145 PSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP--AGAFYNSWSGYQDELVWGAYW 222 (605)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST--THHHHCCSSCSHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC--ccccccCCCCCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987654 678999988999999999999
Q ss_pred HHHHcCChhHHHHHHHcccccCCCC------CCCccCccchhhHHHHhhcccccccchHHHHHHHHHHHHHHHHhCCCCC
Q 015542 159 LHRASQNSSYLAYIQSNGHILGADD------DDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSS 232 (405)
Q Consensus 159 Ly~aTg~~~Yl~~~~~~~~~~~~~~------~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 232 (405)
||+||||++|+++++.++..++... ..+.++|+++..++.+||++. .++ +.+++.++.+++.++.+..
T Consensus 223 Ly~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~----~~y~~~a~~~~~~~~~~~~ 296 (605)
T 1tf4_A 223 LYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKE--TGK----QKYIDDANRWLDYWTVGVN 296 (605)
T ss_dssp HHHHHCCHHHHHHHHHHGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHH--HCC----HHHHHHHHHHHHHTTTCBT
T ss_pred HHHHhCCHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHhc--cCh----HHHHHHHHHHHHHHhcccC
Confidence 9999999999999999876554321 125799999999999888752 222 4688889999887765433
Q ss_pred CCcccccCCCccccCCCChHHHHHHHHHHHHHHhhhhhcCCCccccCCCccCHHHHHHHHHhcchhhcCCCCCCcceeee
Q 015542 233 SFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVG 312 (405)
Q Consensus 233 ~~~~~~t~~g~~~~~~wg~~~~~~n~a~l~~~~a~~l~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyV~G 312 (405)
.+++++||+|+.|...||+++|++|.+||+++|++++.. ....++|+++|++|||||||+||+++|||||
T Consensus 297 ~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~a~~~~~----------~~~~~~y~~~A~~qidYiLG~Np~~~SyvvG 366 (605)
T 1tf4_A 297 GQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVG 366 (605)
T ss_dssp TBCCCBCTTSCBCCCSSSHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTT
T ss_pred CCccccCCCcceecCCccHHHHHHHHHHHHHHHHHhccc----------cccHHHHHHHHHHHHHHhcCCCCCCcceEec
Confidence 347899999999988999999999999999999987642 1246899999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCccccCCCcccccCCCCCCCCcccceecCCCC-CCCCccCcCccccccccccCchHH
Q 015542 313 FGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDN-RDNFADDRNNYQQSEPATYINAPF 391 (405)
Q Consensus 313 ~G~~~p~~pHHr~s~~~~~~~~p~~~~c~~g~~~~~~~~~~~~~~~GalvGGPn~-~d~y~D~~~~y~~nE~aid~NA~~ 391 (405)
||+|+|++||||+++|+.. +.+++|.|||++|+|+||||||. .|+|.|+|.+|++|||||||||+|
T Consensus 367 ~G~~~p~~pHHR~ss~~~~-------------~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~l 433 (605)
T 1tf4_A 367 FGNNPPRNPHHRTAHGSWT-------------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGF 433 (605)
T ss_dssp SSSSCCSCCSCHHHHTCSS-------------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHH
T ss_pred CCCCCCCCCcccccccCcc-------------ccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHH
Confidence 9999999999999887431 23456788999999999999998 999999999999999999999999
Q ss_pred HHHHHHhhcc
Q 015542 392 VGAVAFFSSK 401 (405)
Q Consensus 392 ~~~la~l~~~ 401 (405)
|++||+|...
T Consensus 434 v~~lA~l~~~ 443 (605)
T 1tf4_A 434 SSALAMLVEE 443 (605)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999764
No 5
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=4.2e-94 Score=754.71 Aligned_cols=370 Identities=30% Similarity=0.463 Sum_probs=323.1
Q ss_pred CchhHHHHHHHHHHhhhhhh--hhHHHHHHHHHHHHHHHHHcc----cCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcce
Q 015542 1 MAFTTTLLSWSVIEFGSSMQ--NHLENAKAAIRWGTDYLLKAS----TATPGALYVQVGDPNMDHHCWERPEDMDTPRNV 74 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~~~~--n~~pdiLdeikwg~D~llk~q----~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~ 74 (405)
||||+++|+|+++||++.|+ +++||||||||||+||||||| |+++|.||+|||++..||.+|++||+++.+||+
T Consensus 127 ~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~~g~~y~qVgdg~~Dh~~w~~Pe~~~~~R~~ 206 (611)
T 2yik_A 127 EAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGNVVAFCHQVGDGDIDHAFWGAPENDTMFRRG 206 (611)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSCEEEEEEEESCHHHHTTCCSCGGGCCSCCCE
T ss_pred hHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCCCCcEEEEeCCCCccccCCCChhhCCCCCcc
Confidence 79999999999999999995 899999999999999999996 899999999999999999999999999999999
Q ss_pred EEcCCCCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchHHHH
Q 015542 75 YKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLW 154 (405)
Q Consensus 75 ~~~~~~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De~~w 154 (405)
|.++.++|||++++++|||||+||||||++||+||++||++||++|+||++||+.|.++.. ..+++|+| +++.||++|
T Consensus 207 y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~-~~~~~Y~s-s~~~DEl~W 284 (611)
T 2yik_A 207 WFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGED-GPKGYYGS-SKWQDDYCW 284 (611)
T ss_dssp EEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGG-TTTTTSCC-CCSHHHHHH
T ss_pred eeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCc-ccCcCCCC-CCcccHHHH
Confidence 9999899999999999999999999999999999999999999999999999999976533 36799999 999999999
Q ss_pred HHHHHHHHcCChhHHHHHHHcccccCCCCCCCccCccchhhHHHHhhcccccc---cchHHHHHHHHHHHHH--------
Q 015542 155 GASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLSKGFLE---KNTQEFQLYKAHSDNY-------- 223 (405)
Q Consensus 155 AAaeLy~aTg~~~Yl~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~ll~~~~~~---~~~~~~~~~~~~a~~~-------- 223 (405)
||+|||++|||++|+++++++...++ ...+.++|+++..|+++||++.... ......+.+++.++..
T Consensus 285 AAawLy~ATgd~~Yl~~a~~~~~~~~--~~~~~~~Wd~~~~g~~~lLa~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 362 (611)
T 2yik_A 285 AAAWLYLATQNEHYLDEAFKYYDYYA--PPGWIHCWNDVWSGTACILAEINDLYDKDSQNFEDRYKRASNKNQWEQIDFW 362 (611)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHCCTTS--TTTSCSBTTBCHHHHHHHHHHHHHHHSTTSSHHHHHHHHHTTCCTTSCCCTT
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhc--cCCccCccccchHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999865443 2345799999999999988763210 0112244566655442
Q ss_pred --HHHhCCCCCCCcccccCCCccccCCCChHHHHHHHHHHHHHHhhhhhcCCCccccCCCccCHHHHHHHHHhcchhhcC
Q 015542 224 --ICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILG 301 (405)
Q Consensus 224 --~~~~~~~~~~~~~~~t~~g~~~~~~wg~~~~~~n~a~l~~~~a~~l~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG 301 (405)
+|+.+++....++++||+|+.|...||+++|++|.+|++++|++++. ...++|+++|++|||||||
T Consensus 363 ~~i~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~~~afl~~~ya~~~~------------~~~~~y~~~A~~qidYiLG 430 (611)
T 2yik_A 363 KPIQDLLDKWSGGGITVTPGGYVFLNQWGSARYNTAAQLIALVYDKHHG------------DTPSKYANWARSQMDYLLG 430 (611)
T ss_dssp HHHHHHHHHHHTTSSCBCTTSCBCSCSTTHHHHHHHHHHHHHHHHHTTT------------SSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHhccCCCCceeccCCccccccCCCchHHHHHHHHHHHHHHHHhcC------------ccHHHHHHHHHHhHHhhcC
Confidence 12211111123788999999998899999999999999999988543 1356899999999999999
Q ss_pred CCCCCcceeeecCCCCCCCccccCCCCCCCCCCCCccccCCCcccccCCCCCCCCcccceecCCCCCCCCccCcCccccc
Q 015542 302 DNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQS 381 (405)
Q Consensus 302 ~Np~~~SyV~G~G~~~p~~pHHr~s~~~~~~~~p~~~~c~~g~~~~~~~~~~~~~~~GalvGGPn~~d~y~D~~~~y~~n 381 (405)
+||+++|||||||+|+|++||||+++||.. .+.|.|||++|+|+||||||..|+|.|+|.+|++|
T Consensus 431 ~NP~~~SyvvG~G~~~p~~pHHR~a~~~~~---------------~~~p~p~~~vl~GaLVGGPd~~d~y~D~~~~y~~n 495 (611)
T 2yik_A 431 KNPLNRCYVVGYSSNSVKYPHHRAASGLKD---------------ANDSSPHKYVLYGALVGGPDASDQHVDRTNDYIYN 495 (611)
T ss_dssp CSTTCCBSBTTSSTTBCCCCBCHHHHCCSC---------------TTCCSCCSSCCTTCBCSCCCTTSCCCCCTTCTTTT
T ss_pred CCCCCcceEeccCCCCCCCCcchhhcCccc---------------ccCCCCCCCCCCceeecCCCcccCcCCCCcceeec
Confidence 999999999999999999999999988742 34578999999999999999999999999999999
Q ss_pred cccccCchHHHHHHHHhhcc
Q 015542 382 EPATYINAPFVGAVAFFSSK 401 (405)
Q Consensus 382 E~aid~NA~~~~~la~l~~~ 401 (405)
||||||||+||++||+|...
T Consensus 496 Evai~~NA~lv~~la~l~~~ 515 (611)
T 2yik_A 496 EVAIDYNAAFVGACAGLYRF 515 (611)
T ss_dssp BCCHHHHHHHHHHHHHHHHH
T ss_pred cceecCccHHHHHHHHHHHh
Confidence 99999999999999999874
No 6
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=2.3e-92 Score=741.29 Aligned_cols=366 Identities=36% Similarity=0.590 Sum_probs=325.2
Q ss_pred CchhHHHHHHHHHHhhhhhh--hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcC
Q 015542 1 MAFTTTLLSWSVIEFGSSMQ--NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVS 78 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~~~~--n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~ 78 (405)
||||+++|+|+++||++.|+ |++||||||||||+|||||| |+++|.||+|||++..||.+|++||+|+.+||+|.++
T Consensus 66 ~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk~-~~~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~ 144 (614)
T 1g87_A 66 MSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKC-NPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVD 144 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-CCSTTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEEC
T ss_pred cHHHHHHHHHHHHHhHHHHhhCCChHHHHHHHHHHHHHHHHh-ccCCCcEEEEecCCCcCccccCCcccCCCCCcceEec
Confidence 79999999999999999996 89999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchHHHHHHHH
Q 015542 79 TQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASW 158 (405)
Q Consensus 79 ~~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De~~wAAae 158 (405)
.++|||++++++|||||+||||||++||+||++||++||++|+||++||+.+... ..+++|+| +++.||++|||+|
T Consensus 145 ~~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~---~~~~~Y~s-s~~~DEl~WAAaw 220 (614)
T 1g87_A 145 ASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYT---AASGYYSS-SSFYDDLSWAAVW 220 (614)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCC---TTTTTSCC-SCSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCC---cCcCCcCC-CCchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987432 25789999 9999999999999
Q ss_pred HHHHcCChhHHHHHHHcccccCCC------CCCCccCccchhhHHHHhhcccccccchHHHHHHHHHHHHHHHHhCCCCC
Q 015542 159 LHRASQNSSYLAYIQSNGHILGAD------DDDYSFSWDDKRAGTKVLLSKGFLEKNTQEFQLYKAHSDNYICSLIPGSS 232 (405)
Q Consensus 159 Ly~aTg~~~Yl~~~~~~~~~~~~~------~~~~~~~Wd~~~~~~~~ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 232 (405)
||+||||++|+++++.+...++.. .....|+||++..++++||++. .++ +.+++.++.+++.++.+..
T Consensus 221 Ly~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~----~~~~~~~~~~~~~~~~~~~ 294 (614)
T 1g87_A 221 LYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKL--TNK----QLYKDSIEMNLDFWTTGVN 294 (614)
T ss_dssp HHHHHCCHHHHHHHHHTGGGSCBCTTSSSBCCSSCCBTTBCHHHHHHHHHHH--HCC----HHHHHHHHHHHHHHTTCBT
T ss_pred HHHHhCCHHHHHHHHHHHHhhccccccccccccCCcCccchHHHHHHHHHhc--cCc----HHHHHHHHHHHHHhhhccC
Confidence 999999999999999987655321 1245799999999999998763 222 2456666666655555444
Q ss_pred CCcccccCCCccccCCCChHHHHHHHHHHHHHHhhhhhcCCCccccCCCccCHHHHHHHHHhcchhhcCCCCCCcceeee
Q 015542 233 SFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVG 312 (405)
Q Consensus 233 ~~~~~~t~~g~~~~~~wg~~~~~~n~a~l~~~~a~~l~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyV~G 312 (405)
..++++||+|+.|...||++||++|.+||+++|++++. |+ ....++|+++|++|||||||+| ++|||||
T Consensus 295 ~~~~~~tp~Gl~~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~n--~~SyvvG 363 (614)
T 1g87_A 295 GTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEG-------CT--PSKVSVYKDFLKSQIDYALGST--GRSFVVG 363 (614)
T ss_dssp TBCCEECTTSCEECCSSSHHHHHHHHHHHHHHHHHSTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTT
T ss_pred CCccccCCCCceeccCCCcHHHHHHHHHHHHHHHHhhC-------CC--ccCHHHHHHHHHHHHHHhcCCC--CcceEec
Confidence 45889999999999999999999999999999988542 31 2347899999999999999998 7899999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCccccCCCcccccCCCCCCCCcccceecCCCCCCCCccCcCccccccccccCchHHH
Q 015542 313 FGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFV 392 (405)
Q Consensus 313 ~G~~~p~~pHHr~s~~~~~~~~p~~~~c~~g~~~~~~~~~~~~~~~GalvGGPn~~d~y~D~~~~y~~nE~aid~NA~~~ 392 (405)
||+|+|++||||+++||.. +..+.|.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||
T Consensus 364 ~G~~~p~~pHHR~ss~~~~-------------~~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEvai~~NA~lv 430 (614)
T 1g87_A 364 YGVNPPQHPHHRTAHGSWT-------------DQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFT 430 (614)
T ss_dssp SSSSCCSCCBCHHHHTCSS-------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCCHHHHHHHH
T ss_pred cCCCCCCCCcchhhccCcc-------------ccccCCCCCCCCccccEeeCCCcccCccccccchhhcCCccccchHHH
Confidence 9999999999999988753 134568899999999999999999999999999999999999999999
Q ss_pred HHHHHhhcc
Q 015542 393 GAVAFFSSK 401 (405)
Q Consensus 393 ~~la~l~~~ 401 (405)
++||+|...
T Consensus 431 ~~lA~l~~~ 439 (614)
T 1g87_A 431 GALAKMYKH 439 (614)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
No 7
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=5.8e-82 Score=666.37 Aligned_cols=349 Identities=18% Similarity=0.227 Sum_probs=296.8
Q ss_pred CchhHHHHHHHHHHhhhhhh----------hhHHHHHHHHHHHHHHHHHcccCCC-CcEEEEeCCCCCCCCCCCCCCCCC
Q 015542 1 MAFTTTLLSWSVIEFGSSMQ----------NHLENAKAAIRWGTDYLLKASTATP-GALYVQVGDPNMDHHCWERPEDMD 69 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~~~~----------n~~pdiLdeikwg~D~llk~q~~~~-g~~y~qVg~~~~dh~~W~~Pe~~~ 69 (405)
||||+++|+|++++|++.|+ |++||||||||||+|||||||++++ |.+|+|||++.+||. .+||+++
T Consensus 199 ~a~t~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~--~~Pe~~~ 276 (639)
T 1clc_A 199 AGITVGSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGF--IMPENEH 276 (639)
T ss_dssp HHHHHHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCS--CCGGGCC
T ss_pred HHHHHHHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCC--CCchhcC
Confidence 79999999999999999883 6899999999999999999977788 999999999888885 9999999
Q ss_pred CCcceEEcCCCCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCC-CCCCCCcccccccCCCcc
Q 015542 70 TPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSY-SDSLNSVVCPFYCSYSGY 148 (405)
Q Consensus 70 ~~R~~~~~~~~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y-~~~~~~~~~~~Y~s~~~~ 148 (405)
.+|++++ |+|++++++|||||+||||||++||+||++||++||++|+||++||+.+ .++ .+..+++|+| +++
T Consensus 277 ~~R~~~~-----~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~-~~~~~g~Y~s-s~~ 349 (639)
T 1clc_A 277 DERFFVP-----WSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQ-SGFSTGEYAT-VSD 349 (639)
T ss_dssp SCCEEEE-----ECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCC-TTCCSCCCCC-SCS
T ss_pred CCceEec-----CCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCC-ccccccccCC-CCc
Confidence 9999887 4689999999999999999999999999999999999999999999984 544 3346789999 999
Q ss_pred chHHHHHHHHHHHHcCChhHHHHHHHcccccCCCCCCCccCccchhhHHHHhhc---cccccc--chHHHHHHHHHHHHH
Q 015542 149 LDELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKVLLS---KGFLEK--NTQEFQLYKAHSDNY 223 (405)
Q Consensus 149 ~De~~wAAaeLy~aTg~~~Yl~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~ll~---~~~~~~--~~~~~~~~~~~a~~~ 223 (405)
.||++|||+|||++|||++|+++++++++.++. .....|+|+++..++.++|+ +..+.+ .+.+++.+++.++.+
T Consensus 350 ~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~-~~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~ 428 (639)
T 1clc_A 350 ADDRLWAAAEMWETLGDEEYLRDFENRAAQFSK-KIEADFDWDNVANLGMFTYLLSERPGKNPALVQSIKDSLLSTADSI 428 (639)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHTCSS-SCCSSCCTTCCHHHHHHHHHHCCCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcc-ccCCCCCchhhHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988655432 12233599999988877665 222221 245677788888998
Q ss_pred HHHhCCCCCCCcccccCCCccccCCCChHHHHHHHHHHHHHHhhhhhcCCCccccCCCccCHHHHHHHHHhcchhhcCCC
Q 015542 224 ICSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDN 303 (405)
Q Consensus 224 ~~~~~~~~~~~~~~~t~~g~~~~~~wg~~~~~~n~a~l~~~~a~~l~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~N 303 (405)
++.. +.+|+ +++++ +...||++++++|.+|+++++.+ +. +.++|+++|++|||||||+|
T Consensus 429 ~~~~-~~~~~-g~~~~-----~~~~WGsn~~~~~~a~~~~~a~~-l~-------------~~~~~~~~A~~qidYiLG~N 487 (639)
T 1clc_A 429 VRTS-QNHGY-GRTLG-----TTYYWGCNGTVVRQTMILQVANK-IS-------------PNNDYVNAALDAISHVFGRN 487 (639)
T ss_dssp HHHH-HTSTT-CCTTT-----TCCCTTHHHHHHHTHHHHHHHHH-HS-------------CCHHHHHHHHHHHHHHHTCS
T ss_pred HHhc-cCCCC-CcccC-----CCCCCchHHHHHHHHHHHHHHHh-cC-------------CHHHHHHHHHHHHhhccCCC
Confidence 8544 55665 45543 33457999999999998887654 43 35799999999999999999
Q ss_pred CCCcceeeecCCCCCCCccccCCCCCCCCCCCCccccCCCcccccCCCCCCCCcccceecCCCC-CCCCccCcCcccccc
Q 015542 304 PAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDN-RDNFADDRNNYQQSE 382 (405)
Q Consensus 304 p~~~SyV~G~G~~~p~~pHHr~s~~~~~~~~p~~~~c~~g~~~~~~~~~~~~~~~GalvGGPn~-~d~y~D~~~~y~~nE 382 (405)
|+++|||||||.|+|++||||.++++. .|++++|+||||||. .|+|.|+|.+|++||
T Consensus 488 P~~~SyvvG~G~~~p~~pHHR~s~~~~----------------------~~~~~~GalVGGP~~~~d~y~D~r~~y~~nE 545 (639)
T 1clc_A 488 YYNRSYVTGLGINPPMNPHDRRSGADG----------------------IWEPWPGYLVGGGWPGPKDWVDIQDSYQTNE 545 (639)
T ss_dssp TTCCCSBTTSSSSCCSSCBCHHHHHSS----------------------CSSCCSSCBCCCCCSSTTCCCCCTTCTTTSB
T ss_pred CCCceEEEecCCCCCCCCcchhhccCC----------------------CCCCCCeeeecCCCccccccccCcccceecc
Confidence 999999999999999999999654321 135689999999999 999999999999999
Q ss_pred ccccCchHHHHHHHHhhccC
Q 015542 383 PATYINAPFVGAVAFFSSKT 402 (405)
Q Consensus 383 ~aid~NA~~~~~la~l~~~~ 402 (405)
|+|||||+|+++++++...+
T Consensus 546 ~~~~~nA~~v~~la~~~~~~ 565 (639)
T 1clc_A 546 IAINWNAALIYALAGFVNYN 565 (639)
T ss_dssp CCHHHHHHHHHHHHTTTTCC
T ss_pred ccccchHHHHHHHHHhhhcc
Confidence 99999999999999987643
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=1.9e-82 Score=658.06 Aligned_cols=350 Identities=21% Similarity=0.291 Sum_probs=294.8
Q ss_pred CchhHHHHHHHHHHhhhhhh---------hh--HHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCC
Q 015542 1 MAFTTTLLSWSVIEFGSSMQ---------NH--LENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMD 69 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~~~~---------n~--~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~ 69 (405)
||||+++|+|++++|++.|. |+ +||||||||||+|||||||.+++|.+|+|||+..+. ..|.+||+++
T Consensus 154 ~a~t~~~L~~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w~-g~~~~Pe~~~ 232 (537)
T 3gzk_A 154 AAKAVADLLLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFP-PLDTRPEDDD 232 (537)
T ss_dssp HHHHHHHHHHHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSCC-CTTCCGGGCC
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCcC-CCCcCcccCC
Confidence 78999999999999999883 67 999999999999999999434779999999974221 1248999999
Q ss_pred CCcceEEcCCCCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccc
Q 015542 70 TPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYL 149 (405)
Q Consensus 70 ~~R~~~~~~~~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~ 149 (405)
.+|++++++ +..++++|||||+||||||++||+||++||++||++|+|+++||+.+..+..+...++|++ +++.
T Consensus 233 ~~R~~~~~~-----t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~-~~~~ 306 (537)
T 3gzk_A 233 APLVLSPIS-----YAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGD-AELR 306 (537)
T ss_dssp SCEEECCBC-----HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCC-SCCH
T ss_pred CcceEeecC-----CcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCC-Cccc
Confidence 999998864 5789999999999999999999999999999999999999999998644333446789999 9999
Q ss_pred hHHHHHHHHHHHHcCChhHHHHHHHcccccCCCCCCCccCccchhhHHHH--hhccccc-c--cchHHHHHHHHHHHHHH
Q 015542 150 DELLWGASWLHRASQNSSYLAYIQSNGHILGADDDDYSFSWDDKRAGTKV--LLSKGFL-E--KNTQEFQLYKAHSDNYI 224 (405)
Q Consensus 150 De~~wAAaeLy~aTg~~~Yl~~~~~~~~~~~~~~~~~~~~Wd~~~~~~~~--ll~~~~~-~--~~~~~~~~~~~~a~~~~ 224 (405)
||++|||+|||++|||.+|+++++++... . ....|+||++..++.+ |+++... . ..+.+++.+++.++.++
T Consensus 307 Del~wAA~~Ly~aTgd~~Yl~~a~~~~~~-~---~~~~~~Wd~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ad~~~ 382 (537)
T 3gzk_A 307 DELLWASCALLRMTGDSAWARVCEPLLDL-D---LPWELGWADVALYGVMDYLRTPRAAVSDDVRNKVKSRLLRELDALA 382 (537)
T ss_dssp HHHHHHHHHHHHHHCCGGGHHHHHHHHHS-C---CCCCCSSSCCHHHHHHHHHTSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHhhhc-c---CCCccchHHhHHHHHHHHHhCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987642 1 2357999999887654 5555321 1 12456777888888886
Q ss_pred HHhCCCCCCCcccccCCCccccCCCChHHHHHHHHHHHHHHhhhhhcCCCccccCCCccCHHHHHHHH-HhcchhhcCCC
Q 015542 225 CSLIPGSSSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALA-KKQVDYILGDN 303 (405)
Q Consensus 225 ~~~~~~~~~~~~~~t~~g~~~~~~wg~~~~~~n~a~l~~~~a~~l~~~~~~~~~~~~~~~~~~y~~~a-~~ql~YiLG~N 303 (405)
..++.+|+ ++.++++++. ||++++++|.+|+++++.+ ++ ++.+|++++ ++|||||||+|
T Consensus 383 -~~~~~~~~-g~~~~~~~~~----WGsn~~~~n~a~~l~~a~~-~~-------------~~~~y~~~aa~~qidYiLG~N 442 (537)
T 3gzk_A 383 -AMAESHPF-GIPMRDDDFI----WGSNMVLLNRAMAFLLAEG-VG-------------VLHPAAHTVAQRAADYLFGAN 442 (537)
T ss_dssp -HHHHHSTT-CCSCCGGGCC----TTHHHHHHHHHHHHHHHGG-GT-------------CCCTTHHHHHHHHHHHHBTCS
T ss_pred -HhccCCCC-ceeecCCCCc----ccchHHHHHHHHHHHHHhh-cc-------------CCHHHHHHHHHHhHHHhcCCC
Confidence 44456665 7788888776 5899999999999887765 32 235789999 99999999999
Q ss_pred CCCcceeeecCCCCCCCccccCCCCCCCCCCCCccccCCCcccccCCCCCCCCcccceecCCCCC---------------
Q 015542 304 PAKMSYMVGFGERYPQHVHHRGSSLPSIHAHPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNR--------------- 368 (405)
Q Consensus 304 p~~~SyV~G~G~~~p~~pHHr~s~~~~~~~~p~~~~c~~g~~~~~~~~~~~~~~~GalvGGPn~~--------------- 368 (405)
|+++|||||||+|+|++||||.++++. +++++||+||||||..
T Consensus 443 P~~~SyVvG~G~~~p~~pHHR~s~~~~----------------------~~~p~~GalVGGPn~~~~D~~~~~~~~~~~~ 500 (537)
T 3gzk_A 443 PLGQCYVTGFGQRPVRHPHHRPSVADD----------------------VDHPVPGMVVGGPNRHLQDEIARAQLAGRPA 500 (537)
T ss_dssp TTCCBCBBTCSSSCBCSCBCHHHHHHC----------------------TTSCCTTCBCCCCCTTCCSHHHHHHCTTCCG
T ss_pred CCCceeEecCCCCCCCCCcchhhhcCC----------------------CCCCCCCCCccCCCcccccchhhhcccCCCc
Confidence 999999999999999999999876532 1367999999999976
Q ss_pred -CCCccCcCccccccccccCchHHHHHHHHhhccCC
Q 015542 369 -DNFADDRNNYQQSEPATYINAPFVGAVAFFSSKTT 403 (405)
Q Consensus 369 -d~y~D~~~~y~~nE~aid~NA~~~~~la~l~~~~~ 403 (405)
|+|.|+|.+|++|||||||||+||++||+|.+..+
T Consensus 501 ~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~g 536 (537)
T 3gzk_A 501 MEAYIDHQDSYSTNEVAVYWNSPAVFVIAALLEARG 536 (537)
T ss_dssp GGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHSCCC
T ss_pred ccCcCCCCccccccccchHHHHHHHHHHHHHHHhcC
Confidence 79999999999999999999999999999998765
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=1.2e-80 Score=654.23 Aligned_cols=373 Identities=19% Similarity=0.224 Sum_probs=305.8
Q ss_pred CchhHHHHHHHHHHhhh-------hh----------hhhHHHHHHHHHHHHHHHHHcccCCCC---cEEEEeCCCCCCCC
Q 015542 1 MAFTTTLLSWSVIEFGS-------SM----------QNHLENAKAAIRWGTDYLLKASTATPG---ALYVQVGDPNMDHH 60 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~-------~~----------~n~~pdiLdeikwg~D~llk~q~~~~g---~~y~qVg~~~~dh~ 60 (405)
||||+++|++.|+.|++ .| .|++||||||||||+|||||| |..+| .+|.||+++..||.
T Consensus 187 ~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~-q~~~g~~~~~~g~v~~~~~D~~ 265 (609)
T 1ut9_A 187 GGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKM-QVTEKEDPSIAGMVHHKIHDFR 265 (609)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHH-BCCTTTCGGGTTCEECEEEESS
T ss_pred hHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHh-ccCCCCcceEEEEecCCCCCcc
Confidence 78999888888887642 23 177999999999999999999 66666 78889998888997
Q ss_pred CC---CCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCC--
Q 015542 61 CW---ERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLN-- 135 (405)
Q Consensus 61 ~W---~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~-- 135 (405)
+| .+||+++.+|++. .|+|++++++|||||+||||||++||+||++||++||++|+||++||+.|.+..+
T Consensus 266 w~g~~~~Pe~~~~~R~~~-----~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~ 340 (609)
T 1ut9_A 266 WTALGMLPHEDPQPRYLR-----PVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGS 340 (609)
T ss_dssp CCCSSCCGGGCCSBEEEC-----CEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSS
T ss_pred cCCCCCChhhCCCceeec-----CCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCccccccccccc
Confidence 66 4899999999863 5899999999999999999999999999999999999999999999999977632
Q ss_pred -CcccccccCCCccchHHHHHHHHHHHHcCChhHHHHHHHccc------ccCC--------CCCCCccCccchhhHHHHh
Q 015542 136 -SVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNGH------ILGA--------DDDDYSFSWDDKRAGTKVL 200 (405)
Q Consensus 136 -~~~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~~~~~~~------~~~~--------~~~~~~~~Wd~~~~~~~~l 200 (405)
...+++|+| +++.||++|||+|||+||||++|+++++++.. .++. ......|+||++..+++++
T Consensus 341 ~~~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~Wd~~~~~~~~l 419 (609)
T 1ut9_A 341 GGPGGGPYND-DYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFTWGTTQGLGTIT 419 (609)
T ss_dssp SSCBSCCCCB-SCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCCSSCCHHHHHHH
T ss_pred CccCCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccchhhhHHHHHHH
Confidence 345789999 99999999999999999999999999998754 2220 1223479999999999988
Q ss_pred hcc--ccccc--chHHHHHHHHHHHHHHHHhCCCC---CCCcccccCCCccccCCCChHHHHHHHHHHHHHHhhhhhcCC
Q 015542 201 LSK--GFLEK--NTQEFQLYKAHSDNYICSLIPGS---SSFQAQYTAGGLFYKASESNLQYVTTTAFLLLTYAKYLSSNG 273 (405)
Q Consensus 201 l~~--~~~~~--~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~t~~g~~~~~~wg~~~~~~n~a~l~~~~a~~l~~~~ 273 (405)
|+. ..+.+ .+..++.++..++.|+|...... ++....+||+|+. ||+++|++|.+|+++++.+ ++
T Consensus 420 la~~~~~l~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~~----WGs~~~~~n~a~~~~~a~~-~~--- 491 (609)
T 1ut9_A 420 LALVENGLPATDIQKARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGYP----WGSNSFILNQMIVMGYAYD-FT--- 491 (609)
T ss_dssp HHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSCC----TTHHHHHHHHHHHHHHHHH-HH---
T ss_pred HHhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCccccccccCCCCcc----cccCHHHHHHHHHHHHHHH-hc---
Confidence 863 22322 24567788999999998764432 2333445678885 6899999999999877655 33
Q ss_pred CccccCCCccCHHHHHHHHHhcchhhcCCCCCCcceeeecCCCCCCCccccCCCCCCCCCCC-CccccCCCcccccCCCC
Q 015542 274 GVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHAHP-DHIACNDGFQYLYSRSP 352 (405)
Q Consensus 274 ~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyV~G~G~~~p~~pHHr~s~~~~~~~~p-~~~~c~~g~~~~~~~~~ 352 (405)
+..+|+++|++|||||||+||+++|||||||+|+|++||||+++.+.....| .+..|..|. .++..|
T Consensus 492 ----------~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l~Gg--p~~~~~ 559 (609)
T 1ut9_A 492 ----------GDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGIISGG--PNSRFE 559 (609)
T ss_dssp ----------CCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCBCCC--CCTTCC
T ss_pred ----------ChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCCCCC--CCCCCC
Confidence 3568999999999999999999999999999999999999986654322222 336787774 444556
Q ss_pred CCCCcccceecCCCCCCCCccCcCccccccccccCchHHHHHHHHhhcc
Q 015542 353 NPNVLTGAILGGPDNRDNFADDRNNYQQSEPATYINAPFVGAVAFFSSK 401 (405)
Q Consensus 353 ~~~~~~GalvGGPn~~d~y~D~~~~y~~nE~aid~NA~~~~~la~l~~~ 401 (405)
||++ .|+|||||+..|+|.|+|.+|++|||||||||+||++||+|...
T Consensus 560 dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 560 DPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp SHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred Cccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 6666 89999999999999999999999999999999999999999753
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=4.8e-52 Score=429.41 Aligned_cols=332 Identities=18% Similarity=0.245 Sum_probs=235.7
Q ss_pred CchhH-------HHHHHHHHHhhhhhh-------hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCC
Q 015542 1 MAFTT-------TLLSWSVIEFGSSMQ-------NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPE 66 (405)
Q Consensus 1 ~a~t~-------t~L~w~~~~f~~~~~-------n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe 66 (405)
||||+ ++|+|+++++.+.+. .++||||||||||+|||||| |+.+|.||+||||+ |..+
T Consensus 153 ~a~t~~~npqQ~~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm-~~~~g~~y~qVgd~------W~~d- 224 (586)
T 3h7l_A 153 LSYANYLNPQQTPMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRM-QNEKGFFYMTVFDK------WSKD- 224 (586)
T ss_dssp CGGGSSCCCCCHHHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHT-BCTTSCBBCEEECT------TCCC-
T ss_pred hhhhhhcccchhhHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhc-ccCCCeEEEEecCC------CCCC-
Confidence 78998 699999998888774 24999999999999999999 88999999999984 6432
Q ss_pred CCCCCcce--EEcCCCCC-------chHHHHHHHHHHHHhhhhcccCChHH-HHHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 015542 67 DMDTPRNV--YKVSTQNP-------GSDVAAETAAALAAASVVFKDSDPSY-STKLLKTAMKVFDFADKYRGSYSDSLNS 136 (405)
Q Consensus 67 ~~~~~R~~--~~~~~~~p-------~s~~~~~~AAalA~as~vfk~~D~~y-A~~~L~~A~~~~~~a~~~pg~y~~~~~~ 136 (405)
..+|.+ |.+....| .+..++.+|||||+|||||+ |++| +++||++|+++|+|+++||+.|.++
T Consensus 225 --~~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~--d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~--- 297 (586)
T 3h7l_A 225 --TAQREICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASRLGV--HGEYDQQKYRNAAENGYWHLKEHNTQYLND--- 297 (586)
T ss_dssp --GGGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSS--CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT---
T ss_pred --CCccccccccCCCCCCCcceecCCCCcHHHHHHHHHHHhcccC--CCCcChHHHHHHHHHHHHHHHhcCccccCC---
Confidence 345644 32221111 12346779999999999998 7899 8999999999999999999877542
Q ss_pred cccccccCCCccchHH--HHHHHHHHHHcCChhHHHHHHHcccccCC---CCCCCccCccc-----------hhhHHH-H
Q 015542 137 VVCPFYCSYSGYLDEL--LWGASWLHRASQNSSYLAYIQSNGHILGA---DDDDYSFSWDD-----------KRAGTK-V 199 (405)
Q Consensus 137 ~~~~~Y~s~~~~~De~--~wAAaeLy~aTg~~~Yl~~~~~~~~~~~~---~~~~~~~~Wd~-----------~~~~~~-~ 199 (405)
++ +++.||+ +|||+|||++||+.+||++++.+...+.. ......+.|.. ...++. +
T Consensus 298 ------g~-~~~~De~~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~i 370 (586)
T 3h7l_A 298 ------GE-ENIIDEYCALLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTI 370 (586)
T ss_dssp ------SC-CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHH
T ss_pred ------CC-ccchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCcccCCcccccccccHHHHH
Confidence 13 6789999 99999999999999999999886543321 11234577864 122222 2
Q ss_pred hhcc--cccc---cchHHHHHHHHHHHHHHHHhC--CCCCC-----------------CcccccC-CCccccCCC-ChHH
Q 015542 200 LLSK--GFLE---KNTQEFQLYKAHSDNYICSLI--PGSSS-----------------FQAQYTA-GGLFYKASE-SNLQ 253 (405)
Q Consensus 200 ll~~--~~~~---~~~~~~~~~~~~a~~~~~~~~--~~~~~-----------------~~~~~t~-~g~~~~~~w-g~~~ 253 (405)
-|++ .... ..+.+++.+++.++.++ .+. ..+|+ +++++.+ +|+. | |+++
T Consensus 371 aLl~l~~~~~d~~~~~~a~~~i~~~~d~~l-~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~----WqGsN~ 445 (586)
T 3h7l_A 371 ALCEYLAIEDDSVQTESVKCIVNRACEFEI-KISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYW----WQGENA 445 (586)
T ss_dssp HHHHHHHHCCSTTTTHHHHHHHHHHHHHHH-HHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSC----CCCCHH
T ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhhhh-hhcccccCccccHHHHhhhhccccccccccccCCCCCCe----eeChHH
Confidence 1211 1111 13456666777777544 211 11221 1334433 3443 7 7888
Q ss_pred HHHHHHHHHHHHhhhhhcCCCccccCCCccCHHHHHHHHHhcchhhcCCCCCCcceeeecCCCCCCCccccCCCCCCCCC
Q 015542 254 YVTTTAFLLLTYAKYLSSNGGVATCGSSTVKAENLIALAKKQVDYILGDNPAKMSYMVGFGERYPQHVHHRGSSLPSIHA 333 (405)
Q Consensus 254 ~~~n~a~l~~~~a~~l~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyV~G~G~~~p~~pHHr~s~~~~~~~ 333 (405)
+++|.|++++++.+.+.. ....++|+++|++|||||||+||+++|||||||+|+|+ ||.+.
T Consensus 446 ~~an~a~~~~~a~~~~~~----------~~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~------ 506 (586)
T 3h7l_A 446 RLGSLATMAYLAQPHIAS----------QEIQQQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQY------ 506 (586)
T ss_dssp HHHHHHHHHHHSGGGCCC----------HHHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGG------
T ss_pred HHHHHHHHHHHHHHhcCC----------chhHHHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCccc------
Confidence 899999999888764421 01248999999999999999999999999999999876 67421
Q ss_pred CCCccccCCCcccccCCCCCCCCcccceecCCCCC--C----------CCccCcCccccccccccCchHHHHHHHH
Q 015542 334 HPDHIACNDGFQYLYSRSPNPNVLTGAILGGPDNR--D----------NFADDRNNYQQSEPATYINAPFVGAVAF 397 (405)
Q Consensus 334 ~p~~~~c~~g~~~~~~~~~~~~~~~GalvGGPn~~--d----------~y~D~~~~y~~nE~aid~NA~~~~~la~ 397 (405)
+ -| .+||.|+|||+.. | +..|...+|.-+|--|=--|=|..+++.
T Consensus 507 ---------~-------~~---~~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~a~~~ 563 (586)
T 3h7l_A 507 ---------G-------FF---NAKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAIMS 563 (586)
T ss_dssp ---------T-------BC---CCTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHHHHHH
T ss_pred ---------C-------CC---CCCccccCCCCCCcCChhhHhcCccccccccccCcccHhhccchHHHHHHHHHH
Confidence 1 11 2789999999754 2 3346677999999888766666555543
No 11
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.01 E-value=0.009 Score=58.22 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=84.9
Q ss_pred HHHHHHhhhhhh-hhHHHHHHHHHHHHHHH-HHcccCC-CCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchH
Q 015542 9 SWSVIEFGSSMQ-NHLENAKAAIRWGTDYL-LKASTAT-PGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSD 85 (405)
Q Consensus 9 ~w~~~~f~~~~~-n~~pdiLdeikwg~D~l-lk~q~~~-~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~ 85 (405)
+|-.+.+-..|+ .+-|..|+.++-..++| .+-+++. .|+++-++. +..|+. +-
T Consensus 95 a~~~la~~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~------------------~~~~kn------ai 150 (349)
T 3k7x_A 95 LWNALAAYRLYKATGKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP------------------QMYYKN------TP 150 (349)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT------------------EEEEEE------HH
T ss_pred HHHHHHHHHHHHHHCCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC------------------Cccccc------hh
Confidence 344455556665 56688999999999998 5553432 356654431 122432 23
Q ss_pred HHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHc---C-CCCCCCCCCcccccccCC-Cccc---hHHHHHHH
Q 015542 86 VAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKY---R-GSYSDSLNSVVCPFYCSY-SGYL---DELLWGAS 157 (405)
Q Consensus 86 ~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~---p-g~y~~~~~~~~~~~Y~s~-~~~~---De~~wAAa 157 (405)
..+.++.++|..++++. |+ ++|+.|+++|+|.+++ + +.+.++..... .-+... ..|. --++.+++
T Consensus 151 sN~~~~~~la~l~~~tg--d~----~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~-~g~~~~~~~~tYnqg~~l~g~~ 223 (349)
T 3k7x_A 151 VNAPFIILSCWLYNELN--ET----KYLEWAMKTYEWQTKVLVREDGFVEDGINRLE-DGTIDYEWKFTYNQGVYIGANL 223 (349)
T ss_dssp HHHHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHHHHBCTTSCBCCEECTTS-SSCBCTTCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHhcCCCCCCeEecCCccCC-CCccCCcCeeeHHHHHHHHHHH
Confidence 45677788888888886 33 5899999999999884 2 22333211000 001110 1121 13788999
Q ss_pred HHHHHcCChhHHHHHHHcc
Q 015542 158 WLHRASQNSSYLAYIQSNG 176 (405)
Q Consensus 158 eLy~aTg~~~Yl~~~~~~~ 176 (405)
+||++||+++|++.+++..
T Consensus 224 ~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 224 ELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp HHHHHHCCHHHHHHHHHHH
T ss_pred HHHHhhCcHHHHHHHHHHH
Confidence 9999999999999887753
No 12
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.80 E-value=0.088 Score=51.33 Aligned_cols=116 Identities=10% Similarity=-0.024 Sum_probs=70.4
Q ss_pred HHHH-HHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhh-cccCChHHHHH
Q 015542 34 TDYL-LKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVV-FKDSDPSYSTK 111 (405)
Q Consensus 34 ~D~l-lk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~v-fk~~D~~yA~~ 111 (405)
+.|. .+++++ .|+||+.++. |.. ..|. .+.....+.++.++|.|+++ ++ +| .
T Consensus 21 l~fw~~~~~D~-~GGf~~~~~~---d~~--~~~~--------------eK~l~~nar~i~~~a~a~~~~~~--~~----~ 74 (388)
T 2gz6_A 21 LPFWENHSLDS-EGGYFTCLDR---QGK--VYDT--------------DKFIWLQNRQVWTFSMLCNQLEK--RE----N 74 (388)
T ss_dssp HHHHHHHCBCT-TSSBCCEEBT---TSC--EEEC--------------CEEHHHHHHHHHHHHHHHHHTCC--CH----H
T ss_pred HHHHHhcCCCC-CCCEEeEECC---CCC--cCCc--------------chhHHHHHHHHHHHHHHHHHhcC--CH----H
Confidence 3444 567555 8888888864 211 1121 12335578999999999998 66 44 5
Q ss_pred HHHHHHHHHHHHHHc----CCCCCCCCCCcccccccCCCccchH--HHHHHHHHHHHcCChhHHHHHHHcc
Q 015542 112 LLKTAMKVFDFADKY----RGSYSDSLNSVVCPFYCSYSGYLDE--LLWGASWLHRASQNSSYLAYIQSNG 176 (405)
Q Consensus 112 ~L~~A~~~~~~a~~~----pg~y~~~~~~~~~~~Y~s~~~~~De--~~wAAaeLy~aTg~~~Yl~~~~~~~ 176 (405)
+++.|++..+|..++ .|.+.......+...-.. ....|. +++|.+++|++||++.|++.+++..
T Consensus 75 ~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~-~~~~~~af~i~al~~~y~~tg~~~~l~~A~~~~ 144 (388)
T 2gz6_A 75 WLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQP-YNIFSDCFAAMAFSQYALASGEEWAKDVAMQAY 144 (388)
T ss_dssp HHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCC-CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCC-cchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 788999999999986 222211100000000001 111122 4678899999999999999887754
No 13
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.60 E-value=0.076 Score=51.80 Aligned_cols=144 Identities=13% Similarity=0.127 Sum_probs=85.3
Q ss_pred CchhHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCC
Q 015542 1 MAFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQ 80 (405)
Q Consensus 1 ~a~t~t~L~w~~~~f~~~~~n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~ 80 (405)
|.+.-..++|++.+-.... -+-|..++.++-+++||++--...+|++|+.+.. | +.|.+. ++.+
T Consensus 51 ~l~~nar~i~~~a~a~~~~-~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~---d----g~~~~~--~~~~------ 114 (388)
T 2gz6_A 51 FIWLQNRQVWTFSMLCNQL-EKRENWLKIARNGAKFLAQHGRDDEGNWYFALTR---G----GEPLVQ--PYNI------ 114 (388)
T ss_dssp EHHHHHHHHHHHHHHHHHT-CCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECT---T----SCBCCC--CCCH------
T ss_pred hHHHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC---C----CCcccC--Ccch------
Confidence 3455667777766522210 1457899999999999998523446888887641 2 112111 1211
Q ss_pred CCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCcccccccCCCccch--HHHH
Q 015542 81 NPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYR----GSYSDSLNSVVCPFYCSYSGYLD--ELLW 154 (405)
Q Consensus 81 ~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~p----g~y~~~~~~~~~~~Y~s~~~~~D--e~~w 154 (405)
..-+-++.+|+.++++.. |+ ++|+.|++++++..++- +.+....+. . ..+. +..+ -++.
T Consensus 115 ----~~~af~i~al~~~y~~tg--~~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~-~-~~~~---~~~~~~~~~~ 179 (388)
T 2gz6_A 115 ----FSDCFAAMAFSQYALASG--EE----WAKDVAMQAYNNVLRRKDNPKGKYTKTYPG-T-RPMK---ALAVPMILAN 179 (388)
T ss_dssp ----HHHHHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHTC---------------C-CCCE---ETHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHHHhcCCCcccCcccCC-C-CCCC---CCCHHHHHHH
Confidence 234556778888888876 44 56888888888887752 222111000 0 1111 1112 2567
Q ss_pred HHHHHHHHcCChhHHHHHHHc
Q 015542 155 GASWLHRASQNSSYLAYIQSN 175 (405)
Q Consensus 155 AAaeLy~aTg~~~Yl~~~~~~ 175 (405)
|.+.||++|++..|++.+.+.
T Consensus 180 all~l~~~t~d~~~~~~A~~~ 200 (388)
T 2gz6_A 180 LTLEMEWLLPQETLENVLAAT 200 (388)
T ss_dssp HHHHTGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHH
Confidence 889999999999999987765
No 14
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=94.82 E-value=0.05 Score=53.75 Aligned_cols=139 Identities=15% Similarity=0.117 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHHHHc-ccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCC
Q 015542 4 TTTLLSWSVIEFGSSMQ-NHLENAKAAIRWGTDYLLKA-STATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQN 81 (405)
Q Consensus 4 t~t~L~w~~~~f~~~~~-n~~pdiLdeikwg~D~llk~-q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~ 81 (405)
.-..++|++-+ .|. -+.|+.|+.++-+++||++- .+++.|++|..+-+ +.|.+ ..+.+|
T Consensus 53 ~n~r~i~~~a~---a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~d--------G~~~~--~~~~ly------ 113 (402)
T 3gt5_A 53 SSTRFVFNYAM---AYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCD--------DRVED--DTNHCY------ 113 (402)
T ss_dssp HHHHHHHHHHH---HHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEET--------TEEEE--CCEEHH------
T ss_pred HHHHHHHHHHH---HHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeC--------CCCCc--CCcchH------
Confidence 34555665443 332 35689999999999999984 23333888877722 11211 012222
Q ss_pred CchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHc---C--CCCCCCCCCcc-cccccCCCccchH--HH
Q 015542 82 PGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKY---R--GSYSDSLNSVV-CPFYCSYSGYLDE--LL 153 (405)
Q Consensus 82 p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~---p--g~y~~~~~~~~-~~~Y~s~~~~~De--~~ 153 (405)
+. +-++-||+.+. +..|+. .|+.|++++++.+++ | |.|.+...... ...|.+ ..+- ++
T Consensus 114 ---d~-Af~i~al~~~~---~tgd~~----~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~---~n~~m~l~ 179 (402)
T 3gt5_A 114 ---GL-AFVMLAYSCGL---KVGIKQ----AREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRG---QNANMHMC 179 (402)
T ss_dssp ---HH-HHHHHHHHHHH---HTTCTT----HHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEE---HHHHHHHH
T ss_pred ---HH-HHHHHHHHHHH---HhCChh----HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCC---CCHHHHHH
Confidence 22 22233343322 233544 677888899888875 1 33321100000 011111 1122 45
Q ss_pred HHHHHHHHHcCChhHHHHHHHc
Q 015542 154 WGASWLHRASQNSSYLAYIQSN 175 (405)
Q Consensus 154 wAAaeLy~aTg~~~Yl~~~~~~ 175 (405)
-|.+.|+++||++.|++.+.+.
T Consensus 180 eall~L~~~tgd~~~~~~a~~l 201 (402)
T 3gt5_A 180 EAMLAAYEASGEQRYLERALVL 201 (402)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCHHHHHHHHHH
Confidence 6799999999999999987764
No 15
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=94.23 E-value=0.21 Score=49.30 Aligned_cols=128 Identities=17% Similarity=0.115 Sum_probs=72.5
Q ss_pred hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhh
Q 015542 21 NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVV 100 (405)
Q Consensus 21 n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~v 100 (405)
.+-++.++.+.=.+|+|+.-.++..|.+ ...+. .+.|. +.++ .|+ +.+...+|+-|+++
T Consensus 130 tg~~~~~~~~~~aA~~L~~r~~~~~g~i-qsw~~-------~~~~~----~~~~-iID--------~~mni~~L~~A~~~ 188 (397)
T 2zzr_A 130 NGDVKALEATIKAADKLMERYQEKGGFI-QAWGE-------LGYKE----HYRL-IID--------CLLNIQLLFFAYEQ 188 (397)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETTTTEE-CCSSS-------TTCGG----GCEE-ETT--------HHHHTHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHhCcCCCEE-Eeccc-------CCCCC----CCce-eec--------hHhHHHHHHHHHHH
Confidence 3456788888999999987634433333 22221 01121 1222 343 34578899999999
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHcC----CC-CC----CCCCCcccccccCCCccchH---------HHHHHHHHHHH
Q 015542 101 FKDSDPSYSTKLLKTAMKVFDFADKYR----GS-YS----DSLNSVVCPFYCSYSGYLDE---------LLWGASWLHRA 162 (405)
Q Consensus 101 fk~~D~~yA~~~L~~A~~~~~~a~~~p----g~-y~----~~~~~~~~~~Y~s~~~~~De---------~~wAAaeLy~a 162 (405)
+. ||.| ++.|++..++..++- +. |. +...+.......- .++.|+ .++|.++||++
T Consensus 189 ~g--d~~y----~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~-qGy~dds~WaRGqAw~i~gl~~lY~~ 261 (397)
T 2zzr_A 189 TG--DEKY----RQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTR-QGYSDESSWARGQAWGIYGIPLSYRK 261 (397)
T ss_dssp HC--CHHH----HHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECT-TSSSTTSCBHHHHHHHHHHHHHHHHH
T ss_pred hC--CHHH----HHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcc-cccCcchhhHHHHHHHHHHHHHHHHH
Confidence 97 5665 455555555554431 21 11 1000000000011 345555 46788999999
Q ss_pred cCChhHHHHHHHcc
Q 015542 163 SQNSSYLAYIQSNG 176 (405)
Q Consensus 163 Tg~~~Yl~~~~~~~ 176 (405)
|+|..||+.+++..
T Consensus 262 T~d~~yL~~A~~la 275 (397)
T 2zzr_A 262 MKDYQQIILFKGMT 275 (397)
T ss_dssp HCCHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHH
Confidence 99999999887653
No 16
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=94.17 E-value=0.3 Score=47.88 Aligned_cols=120 Identities=13% Similarity=0.064 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHH-HcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhhc--c
Q 015542 26 AKAAIRWGTDYLL-KASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVF--K 102 (405)
Q Consensus 26 iLdeikwg~D~ll-k~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~vf--k 102 (405)
+..|+.-.+.+++ ++.++..|+|+..++. |. .|.. . ++ .....+.++.++|.|++++ .
T Consensus 15 l~~~~~~~l~~w~~~~~D~~~GGf~~~~~~---dg----~~~~-~-~k----------~l~~nar~l~~~a~a~~~~~~~ 75 (402)
T 1fp3_A 15 VGQELDRVMAFWLEHSHDREHGGFFTCLGR---DG----RVYD-D-LK----------YVWLQGRQVWMYCRLYRKLERF 75 (402)
T ss_dssp HHHHHHHHHHHHHHHSBCTTTSSBCCCBCT---TS----CBSC-C-CE----------EHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHhhccCCCCCCCCEeeEECC---CC----CCCC-C-cc----------chhhhHHHHHHHHHHHHHhccc
Confidence 4455566677888 6756677888887763 21 1221 1 11 2345688899999999998 2
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCccc-ccccCC----------Cccch--HHHHHHHHHHHHcCChhHH
Q 015542 103 DSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVC-PFYCSY----------SGYLD--ELLWGASWLHRASQNSSYL 169 (405)
Q Consensus 103 ~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~-~~Y~s~----------~~~~D--e~~wAAaeLy~aTg~~~Yl 169 (405)
+ +| ++++.|++..+|..++= +... .+ ++|.+. ....| -+++|.++||++||+..|+
T Consensus 76 ~-~~----~~l~~A~~~~~fl~~~~--~d~~----gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~ 144 (402)
T 1fp3_A 76 H-RP----ELLDAAKAGGEFLLRHA--RVAP----PEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQ 144 (402)
T ss_dssp C-CH----HHHHHHHHHHHHHHHHT--BSST----TSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred C-CH----HHHHHHHHHHHHHHHhc--cCcC----CCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHH
Confidence 2 33 58899999999998851 1110 11 222110 11112 3578999999999999999
Q ss_pred HHHHHc
Q 015542 170 AYIQSN 175 (405)
Q Consensus 170 ~~~~~~ 175 (405)
+.+.+.
T Consensus 145 ~~A~~l 150 (402)
T 1fp3_A 145 SEAVDM 150 (402)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877665
No 17
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=92.90 E-value=0.44 Score=46.66 Aligned_cols=134 Identities=15% Similarity=0.060 Sum_probs=75.2
Q ss_pred hhhhh-hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHH
Q 015542 16 GSSMQ-NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAAL 94 (405)
Q Consensus 16 ~~~~~-n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAal 94 (405)
...|+ .+-+..++.+.=.+++|+.- .+..+++....+. .+.|+. ..+ ..|+ +.+...+|
T Consensus 98 ~~~y~ltg~~~~~~~~~~aA~~L~~r-~~~~~g~i~sw~~-------~~~~~~---~~~-~iID--------~mmni~~L 157 (377)
T 2ahf_A 98 KAQWIVEKDESARKLALDAADVLMRR-WRADAGIIQAWGP-------KGDPEN---GGR-IIID--------CLLNLPLL 157 (377)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHTT-EETTTTEECCBSS-------TTCTTT---TTE-EEGG--------GGGGHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHh-CCCCCCeEEeccC-------CCCCCC---Cce-EEec--------hHHHHHHH
Confidence 33443 34457888888899999987 3333333221221 011221 112 3354 34558899
Q ss_pred HHhhhhcccCChHHHHHHHHHHHHHHHHHHHcC----CC-CCCCCCCcccccc----cCCCccchH---------HHHHH
Q 015542 95 AAASVVFKDSDPSYSTKLLKTAMKVFDFADKYR----GS-YSDSLNSVVCPFY----CSYSGYLDE---------LLWGA 156 (405)
Q Consensus 95 A~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~p----g~-y~~~~~~~~~~~Y----~s~~~~~De---------~~wAA 156 (405)
+-|++++. ||. +++.|++..++..++- +. +.....+..+|.- .- .++.|+ .+++.
T Consensus 158 ~~A~~~~g--d~~----y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~-qG~~dds~WaRGqAw~i~gl 230 (377)
T 2ahf_A 158 LWAGEQTG--DPE----YRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTH-QGNTDGSTWTRGQAWGIYGF 230 (377)
T ss_dssp HHHHHHHC--CTH----HHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECS-SSSSTTSCBHHHHHHHHHHH
T ss_pred HHHHHHhC--CHH----HHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCc-CCcCCcchhHHHHHHHHHHH
Confidence 99999997 555 5555666555555541 21 1100000001111 12 355555 46788
Q ss_pred HHHHHHcCChhHHHHHHHcc
Q 015542 157 SWLHRASQNSSYLAYIQSNG 176 (405)
Q Consensus 157 aeLy~aTg~~~Yl~~~~~~~ 176 (405)
++||+.|++..||+.+++..
T Consensus 231 ~~ly~~T~d~~yL~~A~~la 250 (377)
T 2ahf_A 231 ALNSRYLGNADLLETAKRMA 250 (377)
T ss_dssp HHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHCChHHHHHHHHHH
Confidence 99999999999999888754
No 18
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=92.77 E-value=0.7 Score=45.39 Aligned_cols=119 Identities=8% Similarity=0.050 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHH-HcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhhcccC
Q 015542 26 AKAAIRWGTDYLL-KASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDS 104 (405)
Q Consensus 26 iLdeikwg~D~ll-k~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~vfk~~ 104 (405)
+..|+.--+.|.+ ++++ ..|+||..++. |. .|.+. . .+..-..+.++.++|.|++++.
T Consensus 11 l~~~~~~~l~fw~~~~~D-~~GGf~~~l~~---dg----~~~~~-~----------~k~l~~n~r~i~~~a~a~~~~g-- 69 (402)
T 3gt5_A 11 LRTHISDTMAFYHPRCID-SAGGFFHYFRD---DG----SIYNA-T----------HRHLVSSTRFVFNYAMAYLQFG-- 69 (402)
T ss_dssp HHHHHHHHHHHHTTTTBC-TTSSBCCEECT---TS----CEEES-S----------EEEHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhcCCC-CCcCeeeEECC---CC----CCCCC-C----------chhHHHHHHHHHHHHHHHHhhC--
Confidence 5677777788775 5634 67899877753 21 11110 0 1223457899999999999986
Q ss_pred ChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCC--------CccchH---HHHHHHHHHHHcCChhHHHHHH
Q 015542 105 DPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSY--------SGYLDE---LLWGASWLHRASQNSSYLAYIQ 173 (405)
Q Consensus 105 D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~--------~~~~De---~~wAAaeLy~aTg~~~Yl~~~~ 173 (405)
+| .+++.|+++.+|..++ .+... .+++|-+. ..+.++ .++|.++ |.+||++.|++.++
T Consensus 70 ~~----~~l~~A~~~~~fl~~~--~~d~~----~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~l~~A~ 138 (402)
T 3gt5_A 70 TA----EYLDAVHHGLSYVRDV--HRNPA----TGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQAREWMD 138 (402)
T ss_dssp CH----HHHHHHHHHHHHHHHT--TBCTT----TSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTHHHHHH
T ss_pred Ch----HHHHHHHHHHHHHHHh--CccCC----CCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhCChhHHHHHH
Confidence 33 5789999999999885 11110 01222110 111222 4578899 88899999999887
Q ss_pred Hcc
Q 015542 174 SNG 176 (405)
Q Consensus 174 ~~~ 176 (405)
+..
T Consensus 139 ~l~ 141 (402)
T 3gt5_A 139 ETW 141 (402)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 19
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=92.34 E-value=2.4 Score=41.16 Aligned_cols=73 Identities=10% Similarity=-0.002 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchH--HHHHHHHHHHHcC
Q 015542 87 AAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDE--LLWGASWLHRASQ 164 (405)
Q Consensus 87 ~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De--~~wAAaeLy~aTg 164 (405)
.|-+..+|+.++++.+ |+ ++++.|++..++.....+. .. |.. .. .|+ +.++.++||+.||
T Consensus 43 ~G~~~~gl~~~y~~tg--d~----~y~~~a~~~~~~~~~~~g~--------l~--~~~-~~-lDd~~~g~~ll~lY~~Tg 104 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATG--EK----RYFEYAKAYADLLIDDNGN--------LL--FRR-DE-LDAIQAGLILFPLYEQTK 104 (373)
T ss_dssp HHHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHBCTTCC--------BC--CCT-TC-GGGTGGGGGHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHhCCCCc--------cc--CCC-CC-cchHHHHHHHHHHHHHhC
Confidence 3566778999999987 44 5667777777765421111 11 221 11 232 4678999999999
Q ss_pred ChhHHHHHHHccc
Q 015542 165 NSSYLAYIQSNGH 177 (405)
Q Consensus 165 ~~~Yl~~~~~~~~ 177 (405)
+++|++.+....+
T Consensus 105 d~~yl~~a~~la~ 117 (373)
T 1nc5_A 105 DERYVKAAKRLRS 117 (373)
T ss_dssp CHHHHHHHHHHHG
T ss_pred CHHHHHHHHHHHH
Confidence 9999998887653
No 20
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.44 E-value=2.6 Score=42.14 Aligned_cols=129 Identities=14% Similarity=0.088 Sum_probs=81.9
Q ss_pred HHHHHHHhhhhhh------hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCC
Q 015542 8 LSWSVIEFGSSMQ------NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQN 81 (405)
Q Consensus 8 L~w~~~~f~~~~~------n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~ 81 (405)
.+|.+..+.+.++ .+.+.+++.+|=-++.|++. |+++| ++++|=|. |+ .|.
T Consensus 268 nGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~-Q~~~G-~W~~vld~---------~~-------~y~----- 324 (445)
T 3k11_A 268 NGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTAL-QSGEG-FWHQLLDC---------ND-------SYL----- 324 (445)
T ss_dssp HHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTT-CCTTS-CEESBTTC---------TT-------SCE-----
T ss_pred chHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHh-CCCCC-chhhccCC---------CC-------CCC-----
Confidence 5677777776664 46788999999999999999 55555 66665431 21 122
Q ss_pred CchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcC---CCCCCC--CCCc--ccccccCCCc-cch---
Q 015542 82 PGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYR---GSYSDS--LNSV--VCPFYCSYSG-YLD--- 150 (405)
Q Consensus 82 p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~p---g~y~~~--~~~~--~~~~Y~s~~~-~~D--- 150 (405)
-|++++.+|.+|+.+.+. .-.| ++.++..|+++|+-+..+- |....- ..+. ...+|.+... ..|
T Consensus 325 -EsSaTAmfaygllkgvr~-G~Ld---~~~Y~~~A~ka~~~L~~~i~~dG~l~~v~~gtg~g~d~~~Y~~~p~~~~d~~G 399 (445)
T 3k11_A 325 -ETSATAIYVYCLAHAINK-GWID---AIAYGPVAQLGWHAVAGKINEEGQVEGTCVGTGMAFDPAFYYYRPVNVYAAHG 399 (445)
T ss_dssp -EHHHHHHHHHHHHHHHHH-TSSC---HHHHHHHHHHHHHHHHTTBCTTSCBCSCBCCCCCCSSHHHHHTCCBCTTCGGG
T ss_pred -CccHHHHHHHHHHHHHHc-CCCC---HHHHHHHHHHHHHHHHHhCCCCCCEeceeeccCCCCCchhhccCcccCCCCcc
Confidence 267889999999998874 2224 3478999999999998752 211100 0000 0123333111 112
Q ss_pred --HHHHHHHHHHHHcC
Q 015542 151 --ELLWGASWLHRASQ 164 (405)
Q Consensus 151 --e~~wAAaeLy~aTg 164 (405)
.++||++||.+..+
T Consensus 400 ~G~fllA~~E~~~l~~ 415 (445)
T 3k11_A 400 YGPVLWAGAEMIRLLN 415 (445)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 38999999999854
No 21
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=90.11 E-value=0.7 Score=45.18 Aligned_cols=79 Identities=14% Similarity=0.012 Sum_probs=50.1
Q ss_pred HHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHH-HHc---C--C-CCCC-CCCCcccccccCCCccch-------HH
Q 015542 88 AETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFA-DKY---R--G-SYSD-SLNSVVCPFYCSYSGYLD-------EL 152 (405)
Q Consensus 88 ~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a-~~~---p--g-~y~~-~~~~~~~~~Y~s~~~~~D-------e~ 152 (405)
.+.+-.|+.+++++. |+ ++++.|+++++|+ .++ + | .+.. ...+....++. +.+ |.
T Consensus 250 ie~~wlL~~a~~~~~--~~----~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~----d~~~~~W~qaea 319 (402)
T 1fp3_A 250 LEAGWFLLRHSSRSG--DA----KLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLE----WAMKLWWPHSEA 319 (402)
T ss_dssp HHHHHHHHHHHHHTT--CH----HHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTT----TTCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHcC--Ch----HHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCc----CCCcCcHHHHHH
Confidence 445557889999985 44 5788899999888 553 1 2 2211 00000011111 122 67
Q ss_pred HHHHHHHHHHcCChhHHHHHHHcc
Q 015542 153 LWGASWLHRASQNSSYLAYIQSNG 176 (405)
Q Consensus 153 ~wAAaeLy~aTg~~~Yl~~~~~~~ 176 (405)
+.|++.||++||+..|++.+++..
T Consensus 320 ~~a~l~ly~~tgd~~yl~~a~~~~ 343 (402)
T 1fp3_A 320 MIAFLMGYSESGDPALLRLFYQVA 343 (402)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999999877653
No 22
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=89.39 E-value=0.99 Score=43.62 Aligned_cols=71 Identities=24% Similarity=0.229 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchHHHH---HHHHHHHHc
Q 015542 87 AAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLW---GASWLHRAS 163 (405)
Q Consensus 87 ~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De~~w---AAaeLy~aT 163 (405)
.+.+..+|.-++++.. |+ ++++.|+++..+.......+. . .++.||..| |.+.+|++|
T Consensus 48 ~a~~~~~l~d~~~~tg--d~----~y~~~a~~~~~~~~~~~~~~~------------~-~~~~DD~a~~~la~~~aye~t 108 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTK--KQ----ADLEVAEKTYLHNKNRNGGTL------------I-HDFYDDMLWNALAAYRLYKAT 108 (349)
T ss_dssp HHHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHHHTTSSS------------C-CSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHhcCCCCC------------C-ccCccHHHHHHHHHHHHHHHH
Confidence 3444588889999876 44 467777887777766321111 1 334566544 899999999
Q ss_pred CChhHHHHHHHcc
Q 015542 164 QNSSYLAYIQSNG 176 (405)
Q Consensus 164 g~~~Yl~~~~~~~ 176 (405)
|+++||+.+++..
T Consensus 109 ~~~~yL~~A~~l~ 121 (349)
T 3k7x_A 109 GKSIYLEDAQLVW 121 (349)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHH
Confidence 9999999887654
No 23
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=89.31 E-value=0.77 Score=45.40 Aligned_cols=143 Identities=13% Similarity=0.037 Sum_probs=81.3
Q ss_pred chhHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccCC-CCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCC
Q 015542 2 AFTTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTAT-PGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQ 80 (405)
Q Consensus 2 a~t~t~L~w~~~~f~~~~~n~~pdiLdeikwg~D~llk~q~~~-~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~ 80 (405)
.+.-..++|++-+-.- -+-|+.++.++-+++||++-.... .|++|..|.. | |..|+ ....|
T Consensus 50 ~~~nar~i~~~a~a~~---~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~---d---g~~~~----~k~ly----- 111 (421)
T 2zbl_A 50 LWITARMLHVYSVAAS---MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND---Q---GVVDA----SKQGY----- 111 (421)
T ss_dssp HHHHHHHHHHHHHHHH---TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET---T---EEEEC----CEEHH-----
T ss_pred HHHHHHHHHHHHHHHH---cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC---C---CCcCC----chhHH-----
Confidence 4556677777766532 345789999999999999762333 4788866631 1 22222 11111
Q ss_pred CCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHc---C--CCCCCCCCCcccccccCCCccchH--HH
Q 015542 81 NPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKY---R--GSYSDSLNSVVCPFYCSYSGYLDE--LL 153 (405)
Q Consensus 81 ~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~---p--g~y~~~~~~~~~~~Y~s~~~~~De--~~ 153 (405)
+ -+.++.+++. +++.. ++ ..++.|++++++.+++ | |.|.........+.-.. ..+... ++
T Consensus 112 ----d-~Af~i~al~~-~~~tg--~~----~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~-~~~n~~m~~~ 178 (421)
T 2zbl_A 112 ----Q-HFFALLGAAS-AVTTG--HP----EARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDY-RGGNANMHAV 178 (421)
T ss_dssp ----H-HHHHHHHHHH-HHTTT--CT----THHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSC-EEHHHHHHHH
T ss_pred ----H-HHHHHHHHHH-HHHhC--Cc----cHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCccccc-CCCcHHHHHH
Confidence 2 2455556666 56654 33 4577788888888874 2 22211100000000000 112232 36
Q ss_pred HHHHHHHHHcCChhHHHHHHHc
Q 015542 154 WGASWLHRASQNSSYLAYIQSN 175 (405)
Q Consensus 154 wAAaeLy~aTg~~~Yl~~~~~~ 175 (405)
-|.+.|+++||+..|++.+++.
T Consensus 179 ~al~~l~~~tgd~~~~~~A~~~ 200 (421)
T 2zbl_A 179 EAFLIVYDVTHDKKWLDRALRI 200 (421)
T ss_dssp HHHHHHHHTTCCTHHHHHHHHH
T ss_pred HHHHHHHHhhCCHHHHHHHHHH
Confidence 6888999999999999876654
No 24
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=89.08 E-value=17 Score=35.22 Aligned_cols=114 Identities=11% Similarity=0.076 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCC-CCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhhcc
Q 015542 24 ENAKAAIRWGTDYLLKASTATPGALYVQVGDPN-MDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFK 102 (405)
Q Consensus 24 pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~-~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~vfk 102 (405)
.+|.+.|+-.++-|+.+ ...+|.|-.++-++. .|. ....++-|+ .|-+..+|..++++.+
T Consensus 25 ~~~~~~l~~~~~~l~~~-~~~~~~f~~~~~~~~~~d~--------k~~~~W~Wt----------~G~~~~gl~~~ye~Tg 85 (382)
T 3pmm_A 25 SELQALIRNVTQNLVNI-KDESGQFLLRLDDGRVIDT--------KGWAGWEWT----------HGVGLYGIYQYYQQTG 85 (382)
T ss_dssp HHHHHHHHHHHHHHHHC-CCTTCTTCEECTTSCEECS--------SSTTSCSHH----------HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhc-cCccccccccCCccccccC--------CCCcCcccc----------HHHHHHHHHHHHHHHC
Confidence 35666677777788888 555666666554321 111 111233332 2456778888888887
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchHHHHHHHHHHHHcCChhHHHHHHHcc
Q 015542 103 DSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNG 176 (405)
Q Consensus 103 ~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~~~~~~ 176 (405)
|+. +++.|++.++......+... .. ..+ -...+.++||+.||+++|++.+....
T Consensus 86 --d~~----y~~~a~~~~~~~~~~~~~~~-n~-----D~~--------~~~~~l~~lY~~Tgd~~Yl~~a~~~a 139 (382)
T 3pmm_A 86 --DIE----MRDIIDRWFADRFAEGATTK-NV-----NTM--------APFLTLAYRFEETGRMAYLPWLESWA 139 (382)
T ss_dssp --CHH----HHHHHHHHHHHHHHHCCCCC-CT-----TTT--------TTHHHHHHHHHHHCCGGGHHHHHHHH
T ss_pred --CHH----HHHHHHHHHHHHHcCCCCcC-cc-----cch--------HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 444 55555555443332211110 00 001 12346799999999999999886543
No 25
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=87.06 E-value=4.9 Score=40.06 Aligned_cols=76 Identities=18% Similarity=0.135 Sum_probs=49.4
Q ss_pred HHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHc-C---------CCCCCCCCCcccccccCCCccchH---HHH
Q 015542 88 AETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKY-R---------GSYSDSLNSVVCPFYCSYSGYLDE---LLW 154 (405)
Q Consensus 88 ~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~-p---------g~y~~~~~~~~~~~Y~s~~~~~De---~~w 154 (405)
|-+..+|+.+++++++ + ++++.|++..+|..++ | +..... ...+ + . .++.|+ ++|
T Consensus 85 Gv~l~gl~~ay~~Tgd--~----kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~---~r~~-~-~-~~~LDD~g~~~~ 152 (445)
T 3k11_A 85 GVTYSALIAAAETTGD--K----RYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQ---LLQI-L-T-PHALDDAGAVCT 152 (445)
T ss_dssp HHHHHHHHHHHHHHCC--H----HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHH---HHHH-H-S-CCSGGGTHHHHH
T ss_pred HHHHHHHHHHHHHHCC--H----HHHHHHHHHHHHHHhccchhhhhhhccCCeecc---cccc-c-C-CCcchhHHHHHH
Confidence 6778899999999985 3 5677777777766542 1 111000 0001 1 1 334455 458
Q ss_pred HHHHHHHHcCChhHHHHHHHc
Q 015542 155 GASWLHRASQNSSYLAYIQSN 175 (405)
Q Consensus 155 AAaeLy~aTg~~~Yl~~~~~~ 175 (405)
+-++||++|++.+|++.+...
T Consensus 153 ~Li~lY~~T~d~~yl~~a~~~ 173 (445)
T 3k11_A 153 AMIKLRLKDESLPVDGLIQNY 173 (445)
T ss_dssp HHHHHHHHCTTCCCHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHH
Confidence 999999999999999988755
No 26
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=82.55 E-value=6.1 Score=38.19 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=64.2
Q ss_pred HHHHHHHHhhhhhh------hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCC
Q 015542 7 LLSWSVIEFGSSMQ------NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQ 80 (405)
Q Consensus 7 ~L~w~~~~f~~~~~------n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~ 80 (405)
-.+|.+.-+.+-+. .+.+.+++.++=-+++|++.|++++| ++++|=|. |+.... |
T Consensus 214 g~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG-~W~~~ld~---------~~~~~~----~----- 274 (373)
T 1nc5_A 214 SIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETG-LWYQIVDK---------GDRSDN----W----- 274 (373)
T ss_dssp HHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTS-CCBSBTTC---------TTSTTC----C-----
T ss_pred hHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCCC-ceeeecCC---------CCCCCC----C-----
Confidence 35787777777775 36788999999999999999554566 45554321 211111 1
Q ss_pred CCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHc
Q 015542 81 NPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKY 126 (405)
Q Consensus 81 ~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~ 126 (405)
+-|++++.++.+|+.+.+. .-.| ++++..|+++|+.+.++
T Consensus 275 -~EsSatA~~ay~l~~g~~~-g~l~----~~Y~~~a~k~~~~l~~~ 314 (373)
T 1nc5_A 275 -LESSGSCLYMYAIAKGINK-GYLD----RAYETTLLKAYQGLIQH 314 (373)
T ss_dssp -BCHHHHHHHHHHHHHHHHH-TSSC----GGGHHHHHHHHHHHHHH
T ss_pred -ccccHHHHHHHHHHHHHHC-CCCc----HHHHHHHHHHHHHHHHh
Confidence 1257788899999887654 1123 26889999999988663
No 27
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=81.59 E-value=11 Score=36.62 Aligned_cols=142 Identities=14% Similarity=0.037 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeC----CCCCCCCCCCCCCCCCCCcceEEcCCC
Q 015542 5 TTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVG----DPNMDHHCWERPEDMDTPRNVYKVSTQ 80 (405)
Q Consensus 5 ~t~L~w~~~~f~~~~~n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg----~~~~dh~~W~~Pe~~~~~R~~~~~~~~ 80 (405)
+..|+|+...+++ |+.+++++=-++++++-....+|.+||.+- ++..-| .|..+---.+..++
T Consensus 154 i~~L~~A~~~~gd------~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~-~~t~qG~~dds~Wa------ 220 (377)
T 2ahf_A 154 LPLLLWAGEQTGD------PEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIR-GGTHQGNTDGSTWT------ 220 (377)
T ss_dssp HHHHHHHHHHHCC------THHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEE-EECSSSSSTTSCBH------
T ss_pred HHHHHHHHHHhCC------HHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeee-CCCcCCcCCcchhH------
Confidence 5678888777664 568999999999999982344688888765 221111 01111000011111
Q ss_pred CCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHc-CC--C-CCCCCCCcccccccCCCccchH-----
Q 015542 81 NPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKY-RG--S-YSDSLNSVVCPFYCSYSGYLDE----- 151 (405)
Q Consensus 81 ~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~-pg--~-y~~~~~~~~~~~Y~s~~~~~De----- 151 (405)
-.-+-++-+++..+++-+ | .++|+.|+++-++..++ |. . |.+...+.. . ...+|.
T Consensus 221 ----RGqAw~i~gl~~ly~~T~--d----~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~-----~-~~~~d~Sa~ai 284 (377)
T 2ahf_A 221 ----RGQAWGIYGFALNSRYLG--N----ADLLETAKRMARHFLARVPEDGVVYWDFEVPQE-----P-SSYRDSSASAI 284 (377)
T ss_dssp ----HHHHHHHHHHHHHHHHHT--C----HHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCC-----T-TSCBCHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHC--C----hHHHHHHHHHHHHHHHhhHHhCCcccccCCCcc-----C-CCccCCCHHHH
Confidence 112334555666666654 3 35799999999998886 21 1 221100000 0 122332
Q ss_pred HHHHHHHHHHHcC-----ChhHHHHHHHc
Q 015542 152 LLWGASWLHRASQ-----NSSYLAYIQSN 175 (405)
Q Consensus 152 ~~wAAaeLy~aTg-----~~~Yl~~~~~~ 175 (405)
.+.+-++|.+.|+ +..|++.+.+.
T Consensus 285 aA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~ 313 (377)
T 2ahf_A 285 TACGLLEIASQLDESDPERQRFIDAAKTT 313 (377)
T ss_dssp HHHHHHHHHHTSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCccccchHHHHHHHHHH
Confidence 4556678888886 56688766654
No 28
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=77.56 E-value=24 Score=34.46 Aligned_cols=143 Identities=10% Similarity=-0.035 Sum_probs=77.7
Q ss_pred hHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeC----CCCCCCCCCCCCCCCCCCcceEEcCC
Q 015542 4 TTTLLSWSVIEFGSSMQNHLENAKAAIRWGTDYLLKASTATPGALYVQVG----DPNMDHHCWERPEDMDTPRNVYKVST 79 (405)
Q Consensus 4 t~t~L~w~~~~f~~~~~n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg----~~~~dh~~W~~Pe~~~~~R~~~~~~~ 79 (405)
.+..|+|+...+++ |+.+++++=-++++++-...++|.+||.+- ++..-|. +..+---.+..++
T Consensus 178 ni~~L~~A~~~~gd------~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~-~t~qGy~dds~Wa----- 245 (397)
T 2zzr_A 178 NIQLLFFAYEQTGD------EKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKG-VTRQGYSDESSWA----- 245 (397)
T ss_dssp HTHHHHHHHHHHCC------HHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEE-ECTTSSSTTSCBH-----
T ss_pred HHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccC-CcccccCcchhhH-----
Confidence 46678888766654 679999999999999882345788888765 2211100 0001000001111
Q ss_pred CCCchHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHc-CC--C-CCCCCCCcccccccCCCccchH----
Q 015542 80 QNPGSDVAAETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKY-RG--S-YSDSLNSVVCPFYCSYSGYLDE---- 151 (405)
Q Consensus 80 ~~p~s~~~~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~-pg--~-y~~~~~~~~~~~Y~s~~~~~De---- 151 (405)
-.-+-++-+++..++.=+ | .++|+.|+++.++..++ |. . |.+...+. .. ...+|.
T Consensus 246 -----RGqAw~i~gl~~lY~~T~--d----~~yL~~A~~la~~~l~~~~~d~~pywdt~~~~-----~~-~~~~D~Sa~a 308 (397)
T 2zzr_A 246 -----RGQAWGIYGIPLSYRKMK--D----YQQIILFKGMTNYFLNRLPEDKVSYWDLIFTD-----GS-GQPRDTSATA 308 (397)
T ss_dssp -----HHHHHHHHHHHHHHHHHC--C----HHHHHHHHHHHHHHHHTCCTTSCCBSBTTCCT-----TS-CCCBCHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHC--C----HHHHHHHHHHHHHHHHhhHHhCCccccCCCCC-----CC-CCcCCCCHHH
Confidence 111233444445445433 3 35899999999999887 21 1 22111000 01 223443
Q ss_pred -HHHHHHHHHHHcCC---hh--HHHHHHHc
Q 015542 152 -LLWGASWLHRASQN---SS--YLAYIQSN 175 (405)
Q Consensus 152 -~~wAAaeLy~aTg~---~~--Yl~~~~~~ 175 (405)
.+.+-++|.+.|++ .+ |++.+.+.
T Consensus 309 iaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~ 338 (397)
T 2zzr_A 309 TAVCGIHEMLKYLPEVDPDKETYKYAMHTM 338 (397)
T ss_dssp HHHHHHHHHHTTSCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccchhhHHHHHHHHHH
Confidence 34455677777886 67 88877654
No 29
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=77.02 E-value=4.7 Score=39.62 Aligned_cols=115 Identities=9% Similarity=-0.007 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhhcccCC
Q 015542 26 AKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVFKDSD 105 (405)
Q Consensus 26 iLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~vfk~~D 105 (405)
+.+++.--++|.+++.++. +| +.+.. | |.+ -... + ...-..+.++.++|.|++ +++
T Consensus 13 l~~~~~~ll~f~~~~~d~~--GF-~~ld~---~---g~~-~~~~-~----------k~~~~nar~i~~~a~a~~-~g~-- 68 (421)
T 2zbl_A 13 LEQETDRIFNFGKNAVVPT--GF-GWLGN---K---GQI-KEEM-G----------THLWITARMLHVYSVAAS-MGR-- 68 (421)
T ss_dssp HHHHHHHHHHHHGGGEETT--EE-CCBCT---T---SCB-CGGG-C----------EEHHHHHHHHHHHHHHHH-TTC--
T ss_pred HHHHHHHHHHHHHhCcCCC--Cc-ceECC---C---CCC-CCCc-h----------hhHHHHHHHHHHHHHHHH-cCC--
Confidence 5667777778888885555 44 23332 2 221 1110 1 123567899999999997 653
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCC-C-------cc-ch--HHHHHHHHHHHHcCChhHHHHHHH
Q 015542 106 PSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSY-S-------GY-LD--ELLWGASWLHRASQNSSYLAYIQS 174 (405)
Q Consensus 106 ~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~-~-------~~-~D--e~~wAAaeLy~aTg~~~Yl~~~~~ 174 (405)
| ++++.|++..+|..++ .+... .+++|-+. . .. .| .+++|.++ |++||++.|++.+.+
T Consensus 69 ~----~~l~~A~~~~~fl~~~--~~D~~----~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~l~~a~~ 137 (421)
T 2zbl_A 69 P----GAYDLVDHGIKAMNGA--LRDKK----YGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEARKLLDY 137 (421)
T ss_dssp T----THHHHHHHHHHHHTTT--TBCTT----TSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTHHHHHHH
T ss_pred h----hHHHHHHHHHHHHHHh--ccCcC----CCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccHHHHHHH
Confidence 3 4788999999999886 33211 12444221 0 11 11 46789999 999999999988765
Q ss_pred c
Q 015542 175 N 175 (405)
Q Consensus 175 ~ 175 (405)
.
T Consensus 138 ~ 138 (421)
T 2zbl_A 138 T 138 (421)
T ss_dssp H
T ss_pred H
Confidence 4
No 30
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=75.51 E-value=10 Score=36.80 Aligned_cols=88 Identities=15% Similarity=0.105 Sum_probs=64.3
Q ss_pred HHHHHHHhhhhhh--------hhHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCC
Q 015542 8 LSWSVIEFGSSMQ--------NHLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVST 79 (405)
Q Consensus 8 L~w~~~~f~~~~~--------n~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~ 79 (405)
.+|.+.-+.+.++ .+.+.+++.+|=-+++|++. |+++| +.++|=+ .|+ .|.
T Consensus 235 ~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~-q~~~G-~W~~~~d---------~~~-------~y~--- 293 (382)
T 3pmm_A 235 NSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAEC-QDDSG-LWHTLLD---------DPH-------SYL--- 293 (382)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHH-CCTTS-CEESBTT---------CTT-------SCE---
T ss_pred ccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHc-CCCCC-ChhhccC---------CCC-------CCc---
Confidence 4677766666653 46778999999999999999 55655 5666532 122 122
Q ss_pred CCCchHHHHHHHHHHHHhhh--hcccCChHHHHHHHHHHHHHHHHHHHc
Q 015542 80 QNPGSDVAAETAAALAAASV--VFKDSDPSYSTKLLKTAMKVFDFADKY 126 (405)
Q Consensus 80 ~~p~s~~~~~~AAalA~as~--vfk~~D~~yA~~~L~~A~~~~~~a~~~ 126 (405)
-|++++.+|.+|+-+.+ .. + ++++..|+++|+-+.++
T Consensus 294 ---EsSatA~~ay~ll~~~~~g~l---~----~~Y~~~a~ka~~~l~~~ 332 (382)
T 3pmm_A 294 ---EASATAGFAYGILKAVRKRYV---G----QHYAGVAEKAIRGIVQN 332 (382)
T ss_dssp ---EHHHHHHHHHHHHHHHHTTSS---C----GGGHHHHHHHHHHHHHT
T ss_pred ---cccHHHHHHHHHHHHHHcCCC---c----HHHHHHHHHHHHHHHhh
Confidence 25788999999999888 33 3 35899999999999886
No 31
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=74.58 E-value=17 Score=35.49 Aligned_cols=115 Identities=16% Similarity=0.112 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhhc
Q 015542 22 HLENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVVF 101 (405)
Q Consensus 22 ~~pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~vf 101 (405)
+.+.+++.|+=.++|+++. ...+| .|........++.+.. .-|+ ..++-++..++++|
T Consensus 248 ~~~~~~~~i~~~l~~l~~~-~~~~g--------------~wp~~~~~~~~~~~~w----ChG~---~Gi~~~l~~~~~~~ 305 (411)
T 3e6u_A 248 SQGKLHSLVKPSVDYVCQL-KFPSG--------------NYPPCIGDNRDLLVHW----CHGA---PGVIYMLIQAYKVF 305 (411)
T ss_dssp CHHHHHHTHHHHHHHHHHT-CCTTS--------------CCCSBTTCCCCCCCSS----SSSH---HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHh-hccCC--------------CCCCCCCcccCccccc----cCCc---HHHHHHHHHHHHHc
Confidence 3567889999999999999 32222 1311101111122211 1233 34566678888888
Q ss_pred ccCChHHHHHHHHHHHHHHHHHH--HcCCCCCCCCCCcccccccCCCccchHHHHHHHHHHHHcCChhHHHHHHHcc
Q 015542 102 KDSDPSYSTKLLKTAMKVFDFAD--KYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSSYLAYIQSNG 176 (405)
Q Consensus 102 k~~D~~yA~~~L~~A~~~~~~a~--~~pg~y~~~~~~~~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~~~~~~ 176 (405)
. |++|-+.+.+.++..|+... +.++... |. .+ .+..-+.||+.|+++.|++.+....
T Consensus 306 ~--~~~~~~~a~~~~~~~~~~g~~~~~~~lCh--------G~----aG----~~~~ll~~~~~t~~~~~~~~A~~~~ 364 (411)
T 3e6u_A 306 R--EEKYLCDAYQCADVIWQYGLLKKGYGLCH--------GS----AG----NAYAFLTLYNLTQDMKYLYRACKFA 364 (411)
T ss_dssp C--CHHHHHHHHHHHHHHHHHCSBTTCSCSTT--------SH----HH----HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHHhcCccCCCCceec--------Ch----HH----HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 6 67887777777777766421 1111111 11 11 4677889999999999999877653
No 32
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=58.81 E-value=57 Score=32.66 Aligned_cols=94 Identities=16% Similarity=0.072 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHcccCCC-CcEEEEe--CCCCC--------------CCCCCC--CCCCCCCCcceEEcCCCCCchH
Q 015542 25 NAKAAIRWGTDYLLKASTATP-GALYVQV--GDPNM--------------DHHCWE--RPEDMDTPRNVYKVSTQNPGSD 85 (405)
Q Consensus 25 diLdeikwg~D~llk~q~~~~-g~~y~qV--g~~~~--------------dh~~W~--~Pe~~~~~R~~~~~~~~~p~s~ 85 (405)
..++-|+-.+++|..+|+.++ -+.|.-. ++... -+..|. ||++|.. |.-|.+ -
T Consensus 205 ~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~-~yg~~i-------p 276 (489)
T 2p0v_A 205 EWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDAT-TFQFLV-------P 276 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBC-SSSEEH-------H
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcch-hcCcch-------H
Confidence 566788889999999845432 1333321 11100 122333 4665542 333443 2
Q ss_pred HHHHHHHHHHHhhhhcccC--ChHHHHHHHHHHHHHHHHHHHc
Q 015542 86 VAAETAAALAAASVVFKDS--DPSYSTKLLKTAMKVFDFADKY 126 (405)
Q Consensus 86 ~~~~~AAalA~as~vfk~~--D~~yA~~~L~~A~~~~~~a~~~ 126 (405)
..+.++++|-.++.+.+.. |+++|++|.+.|.++-+-.++|
T Consensus 277 SN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~ 319 (489)
T 2p0v_A 277 SNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKY 319 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 3567788888888887653 6789999999999988877664
No 33
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=47.26 E-value=73 Score=30.56 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=41.5
Q ss_pred HHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccccCCCccchHHHHHHHHHHHHcCChh
Q 015542 88 AETAAALAAASVVFKDSDPSYSTKLLKTAMKVFDFADKYRGSYSDSLNSVVCPFYCSYSGYLDELLWGASWLHRASQNSS 167 (405)
Q Consensus 88 ~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~~a~~~pg~y~~~~~~~~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~ 167 (405)
.-++-++..+++++. |+.|.+.+.+.++.+++. ... ..+ +. .+... . =.+.....|++.|+++.
T Consensus 282 ~Gi~~~l~~~~~~~~--d~~~~~~a~~~~~~~~~~----~~~-~~~-~~-LCHG~---a----G~~~~l~~l~~~~~~~~ 345 (409)
T 2g0d_A 282 PGISLLYLYGGLALD--NDYFVDKAEKILESAMQR----KLG-IDS-YM-ICHGY---S----GLIEICSLFKRLLNTKK 345 (409)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH----CTT-CCS-CC-TTTSH---H----HHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHh----ccC-CCC-CC-CCChH---H----HHHHHHHHHHHHhCCHH
Confidence 355677788888876 676655555555555543 111 111 11 11111 1 14677889999999999
Q ss_pred HHHHHHH
Q 015542 168 YLAYIQS 174 (405)
Q Consensus 168 Yl~~~~~ 174 (405)
|+..+..
T Consensus 346 ~~~~a~~ 352 (409)
T 2g0d_A 346 FDSYMEE 352 (409)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9887654
No 34
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=46.63 E-value=84 Score=30.73 Aligned_cols=85 Identities=18% Similarity=0.180 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhh---
Q 015542 24 ENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVV--- 100 (405)
Q Consensus 24 pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~v--- 100 (405)
+.+.+-++=|++|||.| |-.+|+. .| +| |+....... |+- +=|+++.+.-.|+....-
T Consensus 171 ~~y~~Ai~Rgl~wlL~m-Q~~nGGW-pq-----Fd------pdn~~y~~~---IpF---nDDvt~rvle~L~~~~~~~~~ 231 (408)
T 1r76_A 171 APYRDAALKGIEYLLAS-QFPNGGW-PQ-----VW------PLEGGYHDA---ITY---NDDALVHVAELLSDIAAGRDG 231 (408)
T ss_dssp HHHHHHHHHHHHHHHHH-SCTTSCC-BS-----BS------SCCCGGGGS---EEC---GGGHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHHHc-cCCCCCC-cC-----cC------ccccccccC---CCc---CcHHHHHHHHHHHHHHhccCc
Confidence 67889999999999999 4444432 11 11 222111111 111 127888888888877662
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHcC
Q 015542 101 FKDSDPSYSTKLLKTAMKVFDFADKYR 127 (405)
Q Consensus 101 fk~~D~~yA~~~L~~A~~~~~~a~~~p 127 (405)
|.-.|+++..+...+.+++-+|+.+..
T Consensus 232 ~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 232 FGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 333478888899999999999998864
No 35
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=31.91 E-value=29 Score=34.58 Aligned_cols=24 Identities=25% Similarity=0.153 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHc
Q 015542 152 LLWGASWLHRASQNSSYLAYIQSN 175 (405)
Q Consensus 152 ~~wAAaeLy~aTg~~~Yl~~~~~~ 175 (405)
++.|.+|||++|+++.|++.+...
T Consensus 431 lL~allEL~~atq~~~~l~lA~~~ 454 (543)
T 2v8i_A 431 ALFALLDLYHASQVADYRKLAEKI 454 (543)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 578999999999999999987654
No 36
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=26.77 E-value=2.2e+02 Score=26.86 Aligned_cols=84 Identities=21% Similarity=0.213 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHcccCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCCchHHHHHHHHHHHHhhhh---
Q 015542 24 ENAKAAIRWGTDYLLKASTATPGALYVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASVV--- 100 (405)
Q Consensus 24 pdiLdeikwg~D~llk~q~~~~g~~y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~as~v--- 100 (405)
+.+.+-++=|++|||.| |-.+|+. .|+ | |+....... |+- +=|+++.+.-.|+....-
T Consensus 93 ~~y~~Ai~Rgl~wlL~m-Q~~nGGW-pqF-----d------pd~~~Yl~~---IpF---nDDvtarvLelL~~~~~~~~~ 153 (332)
T 1gxm_A 93 TKYRDAVRKAANFLVNS-QYSTGAL-PQF-----Y------PLKGGYSDH---ATF---NDNGMAYALTVLDFAANKRAP 153 (332)
T ss_dssp HHHHHHHHHHHHHHHHH-CCTTSCC-BSE-----E------SCCSGGGGS---EEC---GGGHHHHHHHHHHHHHTTCTT
T ss_pred hHHHHHHHHHHHHHHhc-cCCCCCc-ccc-----C------CCccccccc---CCc---chHHHHHHHHHHHHHHhccCC
Confidence 56888999999999999 4444432 111 0 111111111 111 127889998888887542
Q ss_pred cc---cCChHHHHHHHHHHHHHHHHHHHcC
Q 015542 101 FK---DSDPSYSTKLLKTAMKVFDFADKYR 127 (405)
Q Consensus 101 fk---~~D~~yA~~~L~~A~~~~~~a~~~p 127 (405)
|. =.|+.. .+...+.+++-+|+.+.+
T Consensus 154 ~~~~~~~~~~~-~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 154 FDTDVFSDNDR-TRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp SCSTTSCHHHH-HHHHHHHHHHHHHHHHHS
T ss_pred ccccccccchh-hhhHHHHHHHHHHHHHhh
Confidence 21 014455 677788889999998864
No 37
>2kmg_A KLCA; ARDB, spectroscopy, anti-restriction, plasmid, gene regulation; NMR {Bordetella pertussis}
Probab=25.42 E-value=33 Score=28.45 Aligned_cols=87 Identities=17% Similarity=0.199 Sum_probs=50.2
Q ss_pred HHHHHcccCC-CCcE--EEEeCCCCCCCCCCCCCCCCCCCcceEEcCCC----CCchHHHHHHHHHHHHhhhhcccCChH
Q 015542 35 DYLLKASTAT-PGAL--YVQVGDPNMDHHCWERPEDMDTPRNVYKVSTQ----NPGSDVAAETAAALAAASVVFKDSDPS 107 (405)
Q Consensus 35 D~llk~q~~~-~g~~--y~qVg~~~~dh~~W~~Pe~~~~~R~~~~~~~~----~p~s~~~~~~AAalA~as~vfk~~D~~ 107 (405)
.|+-|+ -++ +|++ |.++.++. .+..|+. .+|....++.+ .-+.+++|-++..++...+.++..+..
T Consensus 40 ~~~~rl-~~dY~GG~W~f~~lsnGg----~ym~P~~--~~~~~l~~~~N~f~~evSAdAaGIi~tL~~ls~~a~~~~~~~ 112 (142)
T 2kmg_A 40 AWMRRL-CERYNGAYWHYYALSDGG----FYMAPDL--AGRLEIEVNGNGFRGELSADAAGIVATLFALGQLAAEIADTD 112 (142)
T ss_dssp HHHHHH-CTTCCCCCCEEEEETTSC----EEEECCC--CSCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHTCSCT
T ss_pred HHHHHh-CccCCCCeeEEEEecCCe----eEecCCC--CCcEEEEecCCCCCceECHHHHHHHHHHHHHHHHHHhccccc
Confidence 355666 443 5554 44666542 2334553 22433322211 234788898888888888888765321
Q ss_pred HHHHHHHHHHHHHHHHHHcCC
Q 015542 108 YSTKLLKTAMKVFDFADKYRG 128 (405)
Q Consensus 108 yA~~~L~~A~~~~~~a~~~pg 128 (405)
-.+.+.++=-+|.+|+.+||.
T Consensus 113 ~~d~l~~~y~~Lrdya~~HpE 133 (142)
T 2kmg_A 113 AADALIDRYHFLRGFAAGHPE 133 (142)
T ss_dssp TTTTTHHHHHHHHHHGGGSTT
T ss_pred ccHHHHHHHHHHHHHHHhCcc
Confidence 223444455799999999984
Done!