Query 015544
Match_columns 405
No_of_seqs 378 out of 3158
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 07:18:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015544.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015544hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1838 Alpha/beta hydrolase [ 100.0 1.8E-71 4E-76 521.2 30.6 362 21-399 3-368 (409)
2 COG0429 Predicted hydrolase of 100.0 4.8E-55 1E-59 396.2 27.6 291 92-396 18-314 (345)
3 PLN02511 hydrolase 100.0 1.3E-50 2.8E-55 395.5 35.1 320 67-398 18-340 (388)
4 PRK10985 putative hydrolase; P 100.0 4.4E-44 9.6E-49 342.3 32.9 294 91-399 2-297 (324)
5 PLN02298 hydrolase, alpha/beta 99.9 9.9E-23 2.2E-27 195.6 19.3 139 118-272 30-171 (330)
6 PLN02385 hydrolase; alpha/beta 99.9 2.1E-22 4.5E-27 194.8 18.3 137 118-271 59-198 (349)
7 PHA02857 monoglyceride lipase; 99.9 6.5E-22 1.4E-26 184.9 20.7 129 124-271 4-133 (276)
8 COG2267 PldB Lysophospholipase 99.9 8.4E-21 1.8E-25 178.3 20.0 249 120-396 9-270 (298)
9 PRK13604 luxD acyl transferase 99.9 6.8E-21 1.5E-25 176.3 16.9 134 121-273 10-144 (307)
10 PRK00870 haloalkane dehalogena 99.9 1.6E-20 3.5E-25 178.0 16.9 133 114-269 13-149 (302)
11 KOG1455 Lysophospholipase [Lip 99.9 2.4E-20 5.2E-25 168.1 16.5 235 117-375 24-265 (313)
12 PRK10749 lysophospholipase L2; 99.9 2.7E-20 5.8E-25 178.6 17.8 144 103-271 18-167 (330)
13 PLN02652 hydrolase; alpha/beta 99.8 4.3E-19 9.3E-24 173.1 21.8 135 121-272 111-247 (395)
14 PRK03592 haloalkane dehalogena 99.8 9E-20 2E-24 172.2 16.4 101 160-269 27-127 (295)
15 PLN02824 hydrolase, alpha/beta 99.8 1.9E-19 4.2E-24 169.9 17.3 102 160-270 29-137 (294)
16 TIGR02240 PHA_depoly_arom poly 99.8 1.7E-19 3.7E-24 168.7 16.0 104 159-271 24-127 (276)
17 TIGR01607 PST-A Plasmodium sub 99.8 1.4E-19 3.1E-24 173.4 14.7 132 125-272 2-187 (332)
18 PRK05077 frsA fermentation/res 99.8 1.5E-18 3.3E-23 170.6 21.3 134 118-271 166-301 (414)
19 TIGR03343 biphenyl_bphD 2-hydr 99.8 2.7E-19 5.9E-24 167.5 14.7 103 160-269 30-135 (282)
20 TIGR03611 RutD pyrimidine util 99.8 4.3E-19 9.4E-24 162.7 14.5 105 158-271 11-116 (257)
21 PLN02679 hydrolase, alpha/beta 99.8 2.5E-18 5.4E-23 166.9 19.9 103 159-270 87-191 (360)
22 TIGR02427 protocat_pcaD 3-oxoa 99.8 4.4E-19 9.5E-24 161.5 13.6 104 159-271 12-115 (251)
23 PF12697 Abhydrolase_6: Alpha/ 99.8 7.4E-19 1.6E-23 157.2 13.4 215 163-400 1-219 (228)
24 PRK10673 acyl-CoA esterase; Pr 99.8 6.7E-19 1.5E-23 162.3 13.3 220 157-401 13-239 (255)
25 PRK10349 carboxylesterase BioH 99.8 7.4E-19 1.6E-23 162.4 13.4 219 160-401 13-240 (256)
26 TIGR03056 bchO_mg_che_rel puta 99.8 4.3E-18 9.4E-23 158.5 17.8 104 159-271 27-131 (278)
27 TIGR01250 pro_imino_pep_2 prol 99.8 1.8E-17 3.9E-22 154.3 21.6 107 159-271 24-132 (288)
28 PLN03087 BODYGUARD 1 domain co 99.8 3.7E-18 8E-23 169.0 17.3 107 159-271 200-310 (481)
29 TIGR01738 bioH putative pimelo 99.8 8.2E-19 1.8E-23 159.3 11.6 97 160-270 4-100 (245)
30 PRK03204 haloalkane dehalogena 99.8 1.7E-17 3.7E-22 156.0 20.7 103 160-270 34-136 (286)
31 KOG4178 Soluble epoxide hydrol 99.8 2.2E-18 4.9E-23 157.8 14.2 235 157-402 41-305 (322)
32 PLN02578 hydrolase 99.8 3.3E-18 7.1E-23 165.7 16.3 102 160-270 86-187 (354)
33 PRK06489 hypothetical protein; 99.8 4.4E-18 9.6E-23 165.3 16.8 108 160-269 69-188 (360)
34 COG1647 Esterase/lipase [Gener 99.8 4.5E-19 9.7E-24 152.5 8.3 204 161-397 16-223 (243)
35 TIGR03695 menH_SHCHC 2-succiny 99.8 1.4E-18 2.9E-23 157.9 12.0 107 160-272 1-107 (251)
36 PLN02872 triacylglycerol lipas 99.8 2.2E-18 4.8E-23 167.6 12.5 158 100-270 25-197 (395)
37 PLN02965 Probable pheophorbida 99.8 2.8E-18 6.1E-23 158.6 11.7 101 162-269 5-106 (255)
38 PRK11126 2-succinyl-6-hydroxy- 99.8 4.8E-18 1E-22 155.4 13.1 102 160-271 2-103 (242)
39 TIGR01249 pro_imino_pep_1 prol 99.8 5.6E-17 1.2E-21 154.0 19.4 126 121-270 5-130 (306)
40 PRK07581 hypothetical protein; 99.7 5.3E-17 1.1E-21 156.5 16.3 109 159-271 40-160 (339)
41 KOG4409 Predicted hydrolase/ac 99.7 3E-16 6.4E-21 144.4 19.0 155 93-268 37-193 (365)
42 TIGR03100 hydr1_PEP hydrolase, 99.7 4.9E-16 1.1E-20 145.1 19.7 124 128-271 9-135 (274)
43 PLN03084 alpha/beta hydrolase 99.7 4.3E-16 9.4E-21 151.3 19.6 105 158-271 125-233 (383)
44 PLN02894 hydrolase, alpha/beta 99.7 1.3E-15 2.7E-20 149.8 21.6 107 158-269 103-210 (402)
45 KOG1454 Predicted hydrolase/ac 99.7 1.3E-16 2.8E-21 151.5 13.8 137 121-272 26-168 (326)
46 PLN02211 methyl indole-3-aceta 99.7 2.6E-16 5.6E-21 146.9 15.2 106 158-269 16-121 (273)
47 PRK08775 homoserine O-acetyltr 99.7 1.5E-16 3.2E-21 153.6 12.3 87 178-271 85-174 (343)
48 TIGR03101 hydr2_PEP hydrolase, 99.7 1.6E-15 3.5E-20 139.6 17.5 111 159-272 24-136 (266)
49 TIGR00976 /NonD putative hydro 99.7 5E-16 1.1E-20 158.9 15.4 133 125-274 1-136 (550)
50 PRK05855 short chain dehydroge 99.7 9.6E-16 2.1E-20 158.2 17.4 125 122-269 4-130 (582)
51 TIGR01392 homoserO_Ac_trn homo 99.7 3.3E-16 7.2E-21 151.6 12.9 112 159-272 30-164 (351)
52 PRK10566 esterase; Provisional 99.7 1.3E-15 2.9E-20 140.0 16.2 105 158-267 25-138 (249)
53 KOG4391 Predicted alpha/beta h 99.7 3.1E-15 6.7E-20 128.0 16.5 129 117-268 51-182 (300)
54 PRK14875 acetoin dehydrogenase 99.7 4.3E-15 9.2E-20 144.8 18.9 104 158-270 129-232 (371)
55 TIGR01836 PHA_synth_III_C poly 99.7 5.5E-16 1.2E-20 150.0 11.8 109 160-273 62-174 (350)
56 PF00561 Abhydrolase_1: alpha/ 99.6 4.7E-16 1E-20 140.3 9.4 200 190-400 1-218 (230)
57 KOG1552 Predicted alpha/beta h 99.6 5.6E-15 1.2E-19 131.0 15.5 181 123-384 38-221 (258)
58 PRK00175 metX homoserine O-ace 99.6 6E-15 1.3E-19 144.2 16.4 107 159-271 47-183 (379)
59 KOG2382 Predicted alpha/beta h 99.6 2E-15 4.3E-20 138.6 10.4 225 157-402 49-298 (315)
60 COG1506 DAP2 Dipeptidyl aminop 99.6 1.7E-14 3.6E-19 149.3 18.3 225 117-398 362-596 (620)
61 PF12695 Abhydrolase_5: Alpha/ 99.6 1.4E-14 3E-19 121.5 12.2 92 162-268 1-93 (145)
62 PF06500 DUF1100: Alpha/beta h 99.6 1.1E-14 2.3E-19 139.3 12.2 135 118-273 163-299 (411)
63 PRK11071 esterase YqiA; Provis 99.6 4.3E-14 9.3E-19 124.5 14.1 92 161-272 2-95 (190)
64 PLN02980 2-oxoglutarate decarb 99.6 2.3E-13 4.9E-18 153.7 22.6 106 159-269 1370-1479(1655)
65 TIGR01838 PHA_synth_I poly(R)- 99.6 6.1E-14 1.3E-18 140.5 15.6 111 159-274 187-306 (532)
66 TIGR01840 esterase_phb esteras 99.5 2.7E-13 5.9E-18 121.7 17.0 110 158-270 11-130 (212)
67 COG2945 Predicted hydrolase of 99.5 9.6E-14 2.1E-18 117.2 12.4 110 157-271 25-138 (210)
68 KOG2624 Triglyceride lipase-ch 99.5 8.7E-14 1.9E-18 133.9 12.9 139 117-270 45-199 (403)
69 PRK10115 protease 2; Provision 99.5 5.8E-13 1.3E-17 138.8 17.7 202 119-373 415-623 (686)
70 KOG4667 Predicted esterase [Li 99.5 5.1E-13 1.1E-17 114.5 14.0 112 158-273 31-142 (269)
71 PF00326 Peptidase_S9: Prolyl 99.5 8.3E-14 1.8E-18 125.1 9.7 173 179-396 4-187 (213)
72 KOG2984 Predicted hydrolase [G 99.5 3.8E-14 8.3E-19 120.1 6.9 214 161-400 43-261 (277)
73 PF02129 Peptidase_S15: X-Pro 99.5 5E-14 1.1E-18 131.4 8.3 130 129-274 1-140 (272)
74 PLN02442 S-formylglutathione h 99.5 4.4E-12 9.5E-17 118.9 18.6 129 129-272 28-180 (283)
75 KOG2564 Predicted acetyltransf 99.4 6.8E-13 1.5E-17 118.1 11.4 107 158-268 72-180 (343)
76 PRK06765 homoserine O-acetyltr 99.4 2.6E-12 5.7E-17 125.2 16.4 112 158-271 54-197 (389)
77 COG4757 Predicted alpha/beta h 99.4 9.4E-13 2E-17 114.2 7.8 125 123-268 8-136 (281)
78 PRK07868 acyl-CoA synthetase; 99.4 7.4E-12 1.6E-16 136.6 15.8 108 158-273 65-180 (994)
79 TIGR02821 fghA_ester_D S-formy 99.4 3.4E-11 7.4E-16 112.5 17.8 130 129-272 23-175 (275)
80 TIGR03230 lipo_lipase lipoprot 99.4 6.4E-12 1.4E-16 122.6 13.2 112 157-270 38-154 (442)
81 COG3458 Acetyl esterase (deace 99.4 4.2E-12 9E-17 112.8 10.6 200 119-374 55-277 (321)
82 PRK11460 putative hydrolase; P 99.4 1.6E-11 3.5E-16 111.7 14.6 107 157-267 13-135 (232)
83 cd00707 Pancreat_lipase_like P 99.4 3E-12 6.4E-17 119.3 9.8 114 157-272 33-149 (275)
84 PF06342 DUF1057: Alpha/beta h 99.3 1.1E-10 2.4E-15 105.3 18.7 127 124-270 10-137 (297)
85 COG2936 Predicted acyl esteras 99.3 2.3E-11 5E-16 120.3 14.2 253 118-391 17-286 (563)
86 PRK10162 acetyl esterase; Prov 99.3 3.5E-10 7.5E-15 107.9 18.6 128 121-272 58-197 (318)
87 COG0412 Dienelactone hydrolase 99.3 3.1E-10 6.7E-15 103.2 17.1 126 122-267 4-143 (236)
88 COG0596 MhpC Predicted hydrola 99.3 1E-10 2.2E-15 105.9 13.9 102 160-271 21-124 (282)
89 PF05448 AXE1: Acetyl xylan es 99.3 3E-10 6.5E-15 107.7 17.2 135 117-270 53-209 (320)
90 PLN00021 chlorophyllase 99.2 9E-11 1.9E-15 111.1 13.0 116 132-270 38-166 (313)
91 PF08538 DUF1749: Protein of u 99.2 1.3E-10 2.8E-15 107.1 13.2 109 159-274 32-152 (303)
92 PF01738 DLH: Dienelactone hyd 99.2 3.3E-11 7.1E-16 108.6 8.6 106 158-268 12-130 (218)
93 TIGR01839 PHA_synth_II poly(R) 99.1 5.1E-10 1.1E-14 111.4 13.1 109 159-274 214-332 (560)
94 TIGR03502 lipase_Pla1_cef extr 99.1 4.9E-10 1.1E-14 116.0 12.0 112 159-272 448-603 (792)
95 PRK05371 x-prolyl-dipeptidyl a 99.1 7.1E-10 1.5E-14 116.7 12.0 181 180-373 270-472 (767)
96 PF12146 Hydrolase_4: Putative 99.1 4.1E-10 8.8E-15 83.8 7.0 46 159-206 15-60 (79)
97 COG3571 Predicted hydrolase of 99.0 5.6E-09 1.2E-13 85.7 13.2 112 159-272 13-126 (213)
98 PF02273 Acyl_transf_2: Acyl t 99.0 1.1E-09 2.5E-14 96.1 9.5 235 122-400 4-240 (294)
99 KOG2931 Differentiation-relate 99.0 9.5E-08 2.1E-12 86.4 20.2 227 120-372 22-262 (326)
100 COG2021 MET2 Homoserine acetyl 99.0 6E-09 1.3E-13 97.6 13.1 114 158-273 49-185 (368)
101 PF06821 Ser_hydrolase: Serine 99.0 4E-09 8.6E-14 90.9 11.1 88 163-270 1-91 (171)
102 PF02230 Abhydrolase_2: Phosph 99.0 7.1E-09 1.5E-13 93.3 12.9 110 156-269 10-139 (216)
103 COG0657 Aes Esterase/lipase [L 99.0 2E-08 4.4E-13 95.6 15.9 130 126-274 57-195 (312)
104 PF12715 Abhydrolase_7: Abhydr 99.0 2.9E-09 6.2E-14 100.6 9.5 129 124-269 92-259 (390)
105 PF10230 DUF2305: Uncharacteri 98.9 1.4E-07 2.9E-12 87.6 17.1 107 160-270 2-122 (266)
106 KOG2100 Dipeptidyl aminopeptid 98.8 5.7E-08 1.2E-12 102.2 14.3 182 129-373 506-699 (755)
107 PF12740 Chlorophyllase2: Chlo 98.8 4.6E-08 1E-12 88.6 11.4 105 157-270 14-131 (259)
108 PF09752 DUF2048: Uncharacteri 98.8 1.3E-07 2.9E-12 88.6 14.6 108 158-269 90-209 (348)
109 PF07819 PGAP1: PGAP1-like pro 98.8 4.8E-08 1E-12 88.2 11.4 109 160-273 4-126 (225)
110 COG0400 Predicted esterase [Ge 98.8 1E-07 2.2E-12 84.2 13.0 106 156-269 14-133 (207)
111 KOG3043 Predicted hydrolase re 98.8 2.9E-08 6.4E-13 86.3 9.1 102 161-266 40-150 (242)
112 PF07859 Abhydrolase_3: alpha/ 98.8 1.4E-08 2.9E-13 90.9 6.9 102 163-272 1-112 (211)
113 PF03096 Ndr: Ndr family; Int 98.8 2.1E-07 4.5E-12 85.2 14.5 225 158-394 21-256 (283)
114 PF10503 Esterase_phd: Esteras 98.7 1.2E-07 2.7E-12 84.7 12.1 109 158-269 14-131 (220)
115 TIGR01849 PHB_depoly_PhaZ poly 98.7 5.3E-08 1.2E-12 94.4 10.2 108 160-274 102-212 (406)
116 PF05728 UPF0227: Uncharacteri 98.7 3.2E-07 7E-12 80.0 13.9 90 163-272 2-93 (187)
117 COG4188 Predicted dienelactone 98.7 2.4E-07 5.3E-12 87.1 13.4 97 158-256 69-182 (365)
118 KOG2281 Dipeptidyl aminopeptid 98.7 1.2E-07 2.6E-12 93.6 10.8 141 114-269 604-761 (867)
119 PF05677 DUF818: Chlamydia CHL 98.6 2E-06 4.3E-11 79.9 17.2 107 158-267 135-251 (365)
120 PLN02733 phosphatidylcholine-s 98.6 2.2E-07 4.7E-12 91.6 11.0 98 174-274 106-205 (440)
121 PF06028 DUF915: Alpha/beta hy 98.6 1.7E-07 3.6E-12 85.7 9.0 113 158-273 10-146 (255)
122 PF01674 Lipase_2: Lipase (cla 98.6 2.7E-08 6E-13 88.7 3.3 89 163-253 4-95 (219)
123 PF03583 LIP: Secretory lipase 98.6 2.3E-06 5E-11 80.4 15.4 99 177-280 14-123 (290)
124 COG4099 Predicted peptidase [G 98.6 2.2E-06 4.8E-11 77.6 14.4 125 128-271 169-305 (387)
125 PF00975 Thioesterase: Thioest 98.6 5E-07 1.1E-11 81.8 10.6 103 162-271 2-105 (229)
126 COG3545 Predicted esterase of 98.6 3.8E-07 8.2E-12 76.7 8.7 92 161-270 3-94 (181)
127 PF00151 Lipase: Lipase; Inte 98.5 5.5E-08 1.2E-12 92.6 4.1 110 157-272 68-189 (331)
128 PF06057 VirJ: Bacterial virul 98.5 3.1E-07 6.7E-12 78.9 8.2 102 162-270 4-107 (192)
129 COG3208 GrsT Predicted thioest 98.5 1.9E-06 4E-11 76.7 13.3 101 158-268 5-110 (244)
130 COG3509 LpqC Poly(3-hydroxybut 98.5 9.4E-07 2E-11 80.4 11.2 125 129-270 43-179 (312)
131 KOG1515 Arylacetamide deacetyl 98.5 3.3E-06 7.1E-11 80.2 14.4 133 123-273 64-210 (336)
132 COG3243 PhaC Poly(3-hydroxyalk 98.5 4.3E-07 9.3E-12 86.4 8.2 113 160-275 107-222 (445)
133 PF07224 Chlorophyllase: Chlor 98.5 6.1E-07 1.3E-11 80.0 8.2 106 157-271 43-158 (307)
134 KOG4627 Kynurenine formamidase 98.5 2.7E-07 5.8E-12 79.1 5.8 106 158-272 65-174 (270)
135 PF05990 DUF900: Alpha/beta hy 98.4 2.1E-06 4.5E-11 78.0 11.3 115 157-272 15-139 (233)
136 PF03403 PAF-AH_p_II: Platelet 98.4 4.6E-07 9.9E-12 88.1 7.2 106 158-268 98-260 (379)
137 COG1770 PtrB Protease II [Amin 98.4 2.2E-06 4.7E-11 85.7 11.8 227 122-401 421-663 (682)
138 KOG1553 Predicted alpha/beta h 98.3 4.8E-06 1E-10 76.9 11.2 135 117-272 211-347 (517)
139 KOG3847 Phospholipase A2 (plat 98.3 4.2E-06 9.2E-11 76.3 9.9 107 157-268 115-273 (399)
140 COG4814 Uncharacterized protei 98.3 3.9E-06 8.5E-11 74.5 8.9 110 159-271 45-177 (288)
141 KOG4840 Predicted hydrolases o 98.2 2.4E-05 5.2E-10 68.1 11.3 108 159-273 35-147 (299)
142 PF00756 Esterase: Putative es 98.2 5.1E-06 1.1E-10 76.3 7.8 114 157-272 21-152 (251)
143 cd00312 Esterase_lipase Estera 98.1 7.6E-06 1.6E-10 83.0 8.9 126 131-271 77-214 (493)
144 KOG2565 Predicted hydrolases o 98.1 1.2E-05 2.7E-10 75.0 9.3 117 129-263 132-257 (469)
145 PF03959 FSH1: Serine hydrolas 98.1 2.1E-05 4.5E-10 70.5 10.0 107 159-269 3-144 (212)
146 COG3319 Thioesterase domains o 98.1 2.6E-05 5.7E-10 71.2 10.6 102 161-271 1-104 (257)
147 PF05057 DUF676: Putative seri 98.0 1.2E-05 2.7E-10 72.2 7.0 40 233-272 78-127 (217)
148 KOG2237 Predicted serine prote 98.0 1.4E-05 3.1E-10 79.5 7.8 139 121-272 442-586 (712)
149 PF12048 DUF3530: Protein of u 97.9 0.00044 9.4E-09 65.6 15.2 115 157-273 84-232 (310)
150 PTZ00472 serine carboxypeptida 97.9 0.00032 6.9E-09 70.3 15.0 113 157-272 74-218 (462)
151 PF05577 Peptidase_S28: Serine 97.8 0.0002 4.4E-09 71.4 12.7 111 159-272 28-150 (434)
152 PRK10439 enterobactin/ferric e 97.8 0.00025 5.4E-09 69.9 12.8 107 158-270 207-323 (411)
153 COG4782 Uncharacterized protei 97.8 0.00017 3.8E-09 67.7 10.0 114 158-272 114-236 (377)
154 PF08840 BAAT_C: BAAT / Acyl-C 97.8 2.6E-05 5.7E-10 69.8 4.2 53 217-272 4-58 (213)
155 PRK10252 entF enterobactin syn 97.7 0.00016 3.5E-09 82.1 11.3 98 160-268 1068-1169(1296)
156 COG1075 LipA Predicted acetylt 97.7 0.00011 2.3E-09 70.6 8.4 105 162-274 61-168 (336)
157 KOG3101 Esterase D [General fu 97.7 0.0001 2.3E-09 63.7 6.9 129 131-272 26-181 (283)
158 KOG3975 Uncharacterized conser 97.7 0.00097 2.1E-08 59.4 12.9 109 158-268 27-145 (301)
159 COG2272 PnbA Carboxylesterase 97.7 0.00011 2.4E-09 71.8 7.4 114 157-271 91-218 (491)
160 PF00135 COesterase: Carboxyle 97.6 0.00011 2.4E-09 75.2 7.4 124 131-268 107-243 (535)
161 PF11339 DUF3141: Protein of u 97.6 0.0015 3.2E-08 64.3 13.6 102 158-274 67-179 (581)
162 KOG3967 Uncharacterized conser 97.6 0.0009 1.9E-08 58.1 10.4 115 158-272 99-229 (297)
163 PF02450 LCAT: Lecithin:choles 97.5 0.00015 3.3E-09 71.0 6.2 87 177-272 66-162 (389)
164 PRK04940 hypothetical protein; 97.5 0.00074 1.6E-08 58.1 9.2 35 233-272 60-94 (180)
165 KOG3253 Predicted alpha/beta h 97.5 0.00015 3.3E-09 71.8 5.5 107 158-272 174-288 (784)
166 PLN02606 palmitoyl-protein thi 97.4 0.0055 1.2E-07 56.9 14.3 105 159-271 26-133 (306)
167 smart00824 PKS_TE Thioesterase 97.3 0.0024 5.3E-08 56.1 11.2 84 179-268 16-100 (212)
168 PF10340 DUF2424: Protein of u 97.3 0.0021 4.6E-08 61.6 10.4 109 159-272 121-237 (374)
169 cd00741 Lipase Lipase. Lipase 97.1 0.0016 3.4E-08 55.0 7.0 56 217-272 12-69 (153)
170 KOG2541 Palmitoyl protein thio 97.1 0.0095 2E-07 53.9 11.9 103 160-271 24-129 (296)
171 PF11144 DUF2920: Protein of u 97.1 0.01 2.3E-07 57.2 13.0 109 157-267 32-216 (403)
172 PLN02633 palmitoyl protein thi 97.0 0.0075 1.6E-07 56.1 11.1 105 159-271 25-132 (314)
173 PF05705 DUF829: Eukaryotic pr 97.0 0.021 4.6E-07 52.0 14.1 103 163-272 2-114 (240)
174 KOG3724 Negative regulator of 96.9 0.0018 4E-08 66.3 6.6 103 160-272 89-222 (973)
175 PF01764 Lipase_3: Lipase (cla 96.8 0.0034 7.4E-08 51.9 6.5 37 217-253 48-84 (140)
176 PF04083 Abhydro_lipase: Parti 96.7 0.004 8.7E-08 43.8 5.3 49 118-175 10-58 (63)
177 PF07082 DUF1350: Protein of u 96.7 0.009 1.9E-07 53.8 8.8 98 159-267 16-122 (250)
178 KOG2551 Phospholipase/carboxyh 96.7 0.044 9.6E-07 48.3 12.7 106 159-268 4-145 (230)
179 COG0627 Predicted esterase [Ge 96.7 0.0049 1.1E-07 58.3 7.4 114 157-272 51-189 (316)
180 PLN02517 phosphatidylcholine-s 96.6 0.0023 5.1E-08 64.3 4.6 93 178-272 158-265 (642)
181 cd00519 Lipase_3 Lipase (class 96.6 0.0046 9.9E-08 56.0 6.1 53 217-270 112-167 (229)
182 KOG2183 Prolylcarboxypeptidase 96.5 0.015 3.3E-07 55.7 8.7 107 160-270 81-202 (492)
183 KOG2369 Lecithin:cholesterol a 96.4 0.0022 4.8E-08 62.4 2.8 92 176-272 124-227 (473)
184 PF06259 Abhydrolase_8: Alpha/ 96.4 0.069 1.5E-06 46.1 11.7 110 159-270 18-144 (177)
185 PF01083 Cutinase: Cutinase; 96.3 0.0075 1.6E-07 52.4 5.6 55 217-271 65-123 (179)
186 COG1505 Serine proteases of th 96.3 0.0042 9.1E-08 62.1 4.1 160 99-273 372-538 (648)
187 PF11187 DUF2974: Protein of u 96.2 0.011 2.4E-07 53.2 6.2 53 217-270 69-123 (224)
188 PF00450 Peptidase_S10: Serine 96.2 0.041 8.9E-07 54.4 10.6 136 122-273 13-184 (415)
189 PF02089 Palm_thioest: Palmito 96.0 0.016 3.4E-07 53.4 6.1 107 159-271 5-117 (279)
190 KOG2182 Hydrolytic enzymes of 95.9 0.06 1.3E-06 53.0 9.9 111 158-271 84-208 (514)
191 COG1073 Hydrolases of the alph 95.9 0.028 6E-07 52.2 7.7 95 158-255 47-154 (299)
192 COG2819 Predicted hydrolase of 95.8 0.39 8.4E-06 43.9 14.2 43 225-269 127-171 (264)
193 KOG2112 Lysophospholipase [Lip 95.8 0.071 1.5E-06 46.6 8.9 104 160-267 3-125 (206)
194 COG3150 Predicted esterase [Ge 95.8 0.097 2.1E-06 44.1 9.2 50 216-270 42-91 (191)
195 PF11288 DUF3089: Protein of u 95.8 0.027 5.8E-07 49.7 6.4 85 184-269 41-135 (207)
196 PLN02454 triacylglycerol lipas 95.8 0.023 5E-07 55.3 6.5 37 217-253 210-248 (414)
197 PLN00413 triacylglycerol lipas 95.7 0.029 6.2E-07 55.3 6.9 53 218-270 269-327 (479)
198 PF04301 DUF452: Protein of un 95.6 0.33 7.1E-06 43.2 12.8 76 160-268 11-88 (213)
199 PLN02162 triacylglycerol lipas 95.6 0.031 6.7E-07 54.9 6.8 53 218-270 263-321 (475)
200 KOG1551 Uncharacterized conser 95.5 0.069 1.5E-06 48.2 8.1 117 130-267 99-227 (371)
201 KOG4540 Putative lipase essent 95.5 0.029 6.3E-07 51.1 5.7 56 215-275 258-313 (425)
202 COG5153 CVT17 Putative lipase 95.5 0.029 6.3E-07 51.1 5.7 56 215-275 258-313 (425)
203 COG4947 Uncharacterized protei 95.3 0.049 1.1E-06 45.9 6.0 49 221-272 89-138 (227)
204 PLN02934 triacylglycerol lipas 95.3 0.045 9.7E-07 54.4 6.7 53 218-270 306-364 (515)
205 PLN03016 sinapoylglucose-malat 95.3 0.34 7.3E-06 48.2 12.9 115 157-271 63-211 (433)
206 COG2382 Fes Enterochelin ester 95.1 0.05 1.1E-06 50.3 6.0 110 157-272 95-214 (299)
207 PLN02209 serine carboxypeptida 94.7 0.59 1.3E-05 46.5 13.0 114 157-272 65-214 (437)
208 COG3946 VirJ Type IV secretory 94.6 0.099 2.1E-06 50.2 6.7 81 162-249 262-342 (456)
209 KOG4372 Predicted alpha/beta h 94.5 0.073 1.6E-06 51.2 5.7 85 158-249 78-166 (405)
210 PLN02408 phospholipase A1 94.4 0.064 1.4E-06 51.5 5.1 53 217-269 182-239 (365)
211 KOG1516 Carboxylesterase and r 94.4 0.075 1.6E-06 54.7 6.1 109 160-269 112-231 (545)
212 PF05576 Peptidase_S37: PS-10 94.3 0.072 1.6E-06 51.4 5.2 108 157-272 60-171 (448)
213 PLN02571 triacylglycerol lipas 94.2 0.071 1.5E-06 52.0 5.1 37 217-253 208-246 (413)
214 KOG4569 Predicted lipase [Lipi 94.1 0.078 1.7E-06 50.9 5.2 61 210-270 148-212 (336)
215 PLN02324 triacylglycerol lipas 93.5 0.12 2.5E-06 50.4 5.1 37 217-253 197-235 (415)
216 KOG1282 Serine carboxypeptidas 93.3 1.1 2.4E-05 44.6 11.6 134 122-271 46-214 (454)
217 PLN02847 triacylglycerol lipas 93.2 0.17 3.6E-06 51.3 5.8 36 218-253 236-271 (633)
218 PLN02719 triacylglycerol lipas 92.9 0.15 3.3E-06 50.7 5.0 37 217-253 277-318 (518)
219 PLN02802 triacylglycerol lipas 92.8 0.17 3.7E-06 50.4 5.0 38 217-254 312-351 (509)
220 KOG4388 Hormone-sensitive lipa 92.6 0.33 7.1E-06 48.7 6.6 102 158-270 394-508 (880)
221 PLN02310 triacylglycerol lipas 92.2 0.16 3.6E-06 49.4 4.1 53 217-270 189-248 (405)
222 PLN02761 lipase class 3 family 92.2 0.22 4.7E-06 49.8 5.0 36 217-252 272-313 (527)
223 PLN02753 triacylglycerol lipas 92.2 0.22 4.7E-06 49.8 5.0 36 217-252 291-331 (531)
224 COG2939 Carboxypeptidase C (ca 92.0 1.2 2.5E-05 44.4 9.7 95 157-254 98-219 (498)
225 PLN03037 lipase class 3 family 91.3 0.22 4.8E-06 49.7 4.0 36 218-253 299-338 (525)
226 PF08237 PE-PPE: PE-PPE domain 90.7 1.7 3.7E-05 39.1 8.8 84 189-272 2-91 (225)
227 PF10142 PhoPQ_related: PhoPQ- 89.1 5.6 0.00012 38.6 11.5 113 231-377 170-283 (367)
228 PLN02213 sinapoylglucose-malat 88.5 1.8 3.9E-05 41.3 7.7 78 191-268 3-94 (319)
229 PF05277 DUF726: Protein of un 86.6 1.7 3.7E-05 41.7 6.2 43 231-273 218-263 (345)
230 COG3673 Uncharacterized conser 85.9 6.3 0.00014 37.1 9.1 97 157-253 28-142 (423)
231 PF06309 Torsin: Torsin; Inte 84.0 1.7 3.8E-05 35.1 4.2 34 157-190 49-82 (127)
232 PF09994 DUF2235: Uncharacteri 83.0 9.2 0.0002 35.6 9.3 41 214-254 72-113 (277)
233 COG0529 CysC Adenylylsulfate k 81.6 10 0.00023 32.6 8.0 43 157-199 19-61 (197)
234 PF03283 PAE: Pectinacetyleste 78.2 3.5 7.6E-05 40.0 4.9 35 217-251 138-174 (361)
235 PF08386 Abhydrolase_4: TAP-li 77.4 1.7 3.7E-05 33.8 2.1 36 355-391 33-68 (103)
236 KOG1202 Animal-type fatty acid 75.7 9.2 0.0002 42.3 7.3 98 157-270 2120-2219(2376)
237 PF01583 APS_kinase: Adenylyls 72.1 7.2 0.00016 32.9 4.6 40 160-199 1-40 (156)
238 COG4822 CbiK Cobalamin biosynt 71.7 16 0.00036 32.2 6.7 56 157-229 135-191 (265)
239 PF06441 EHN: Epoxide hydrolas 70.1 6.8 0.00015 31.0 3.8 33 128-175 75-107 (112)
240 COG4553 DepA Poly-beta-hydroxy 69.2 24 0.00053 32.9 7.5 109 159-274 102-213 (415)
241 KOG1283 Serine carboxypeptidas 68.3 41 0.0009 31.8 8.9 94 157-253 28-142 (414)
242 KOG2521 Uncharacterized conser 65.9 26 0.00057 33.7 7.5 89 158-251 37-127 (350)
243 PF03205 MobB: Molybdopterin g 65.5 12 0.00026 30.8 4.7 46 163-208 2-47 (140)
244 PRK05282 (alpha)-aspartyl dipe 65.4 44 0.00095 30.3 8.6 93 159-252 30-131 (233)
245 TIGR03709 PPK2_rel_1 polyphosp 62.4 10 0.00022 35.0 4.0 41 158-198 53-93 (264)
246 KOG2385 Uncharacterized conser 61.6 17 0.00037 36.4 5.5 44 230-273 444-490 (633)
247 PF09949 DUF2183: Uncharacteri 60.2 51 0.0011 25.5 6.9 81 179-264 14-96 (100)
248 TIGR03707 PPK2_P_aer polyphosp 59.9 11 0.00024 34.0 3.7 41 158-198 28-68 (230)
249 PF07519 Tannase: Tannase and 58.5 10 0.00022 38.3 3.6 89 183-274 53-154 (474)
250 cd03146 GAT1_Peptidase_E Type 57.9 88 0.0019 27.7 9.1 87 159-249 30-129 (212)
251 KOG1532 GTPase XAB1, interacts 55.5 18 0.0004 33.4 4.2 99 156-254 14-146 (366)
252 KOG2029 Uncharacterized conser 54.5 9.8 0.00021 38.8 2.6 54 219-272 510-574 (697)
253 TIGR02069 cyanophycinase cyano 54.3 66 0.0014 29.4 7.9 91 159-251 27-133 (250)
254 KOG2170 ATPase of the AAA+ sup 52.0 22 0.00048 33.4 4.3 33 157-189 106-138 (344)
255 COG5192 BMS1 GTP-binding prote 50.5 2.5E+02 0.0055 29.0 11.4 100 157-265 65-171 (1077)
256 PRK10824 glutaredoxin-4; Provi 48.1 1.4E+02 0.003 23.7 7.8 83 158-256 13-95 (115)
257 PRK00889 adenylylsulfate kinas 48.0 37 0.0008 28.8 5.0 37 161-197 4-40 (175)
258 PF12242 Eno-Rase_NADH_b: NAD( 46.8 25 0.00054 25.7 3.0 43 214-256 18-63 (78)
259 PF03976 PPK2: Polyphosphate k 46.7 8.4 0.00018 34.7 0.7 40 159-198 29-68 (228)
260 cd01841 NnaC_like NnaC (CMP-Ne 46.3 97 0.0021 25.9 7.4 75 161-239 23-97 (174)
261 PRK10751 molybdopterin-guanine 46.2 44 0.00095 28.7 5.0 43 160-202 5-47 (173)
262 TIGR00176 mobB molybdopterin-g 46.0 35 0.00075 28.7 4.3 38 164-201 2-39 (155)
263 PF10081 Abhydrolase_9: Alpha/ 45.8 1.3E+02 0.0029 27.9 8.3 37 234-272 110-149 (289)
264 PF01580 FtsK_SpoIIIE: FtsK/Sp 45.5 77 0.0017 27.6 6.8 64 165-228 42-113 (205)
265 cd04951 GT1_WbdM_like This fam 44.5 1.3E+02 0.0029 28.1 8.8 38 162-199 2-39 (360)
266 cd04502 SGNH_hydrolase_like_7 44.5 78 0.0017 26.5 6.4 75 162-240 23-97 (171)
267 TIGR03712 acc_sec_asp2 accesso 44.2 77 0.0017 31.9 6.9 102 155-270 284-389 (511)
268 PRK07933 thymidylate kinase; V 44.0 51 0.0011 29.3 5.3 41 163-203 2-42 (213)
269 COG3340 PepE Peptidase E [Amin 43.4 25 0.00053 31.2 3.0 90 158-248 30-132 (224)
270 PRK03846 adenylylsulfate kinas 42.8 1.3E+02 0.0027 26.2 7.6 40 158-197 21-60 (198)
271 cd05312 NAD_bind_1_malic_enz N 42.4 21 0.00045 33.2 2.6 84 163-253 27-126 (279)
272 PF09419 PGP_phosphatase: Mito 42.4 73 0.0016 27.2 5.7 53 185-243 36-88 (168)
273 CHL00175 minD septum-site dete 41.4 60 0.0013 30.0 5.6 40 159-198 14-53 (281)
274 PF08484 Methyltransf_14: C-me 40.9 65 0.0014 27.2 5.2 47 217-267 55-101 (160)
275 COG2240 PdxK Pyridoxal/pyridox 40.2 1.2E+02 0.0027 28.1 7.2 92 165-269 10-112 (281)
276 COG1087 GalE UDP-glucose 4-epi 39.5 52 0.0011 31.0 4.7 64 179-242 14-84 (329)
277 PF01656 CbiA: CobQ/CobB/MinD/ 39.1 40 0.00087 28.8 3.9 34 165-198 3-36 (195)
278 COG1763 MobB Molybdopterin-gua 39.1 59 0.0013 27.6 4.6 40 162-201 3-42 (161)
279 COG4088 Predicted nucleotide k 38.9 35 0.00075 30.4 3.2 35 163-197 3-37 (261)
280 COG3727 Vsr DNA G:T-mismatch r 38.9 72 0.0016 25.9 4.7 15 181-195 100-114 (150)
281 COG1073 Hydrolases of the alph 38.5 2.5 5.5E-05 38.8 -4.2 89 159-252 87-179 (299)
282 cd01983 Fer4_NifH The Fer4_Nif 37.9 52 0.0011 24.0 3.9 32 165-196 3-34 (99)
283 TIGR01425 SRP54_euk signal rec 37.8 54 0.0012 32.6 4.8 39 159-197 98-136 (429)
284 TIGR03708 poly_P_AMP_trns poly 37.6 50 0.0011 33.5 4.6 42 158-199 37-78 (493)
285 COG1089 Gmd GDP-D-mannose dehy 37.3 1.1E+02 0.0024 28.7 6.3 67 163-233 4-81 (345)
286 cd01828 sialate_O-acetylestera 37.3 1.4E+02 0.003 24.8 6.9 72 163-239 23-94 (169)
287 PF04084 ORC2: Origin recognit 36.5 1.6E+02 0.0035 28.1 7.7 100 164-268 57-177 (326)
288 COG0552 FtsY Signal recognitio 36.4 2.4E+02 0.0051 27.1 8.5 92 165-266 198-292 (340)
289 PRK13230 nitrogenase reductase 35.6 62 0.0013 29.9 4.7 41 162-203 3-43 (279)
290 PF10686 DUF2493: Protein of u 34.8 83 0.0018 22.6 4.2 33 159-195 30-63 (71)
291 KOG1610 Corticosteroid 11-beta 33.9 1.4E+02 0.0029 28.4 6.5 72 163-238 31-110 (322)
292 cd02036 MinD Bacterial cell di 32.9 75 0.0016 26.6 4.5 35 164-198 3-37 (179)
293 PF01972 SDH_sah: Serine dehyd 32.8 2.7E+02 0.0059 25.9 8.1 61 187-248 46-106 (285)
294 PF11713 Peptidase_C80: Peptid 32.7 22 0.00048 30.0 1.1 51 194-245 58-116 (157)
295 TIGR00455 apsK adenylylsulfate 32.4 3.1E+02 0.0068 23.2 9.2 39 159-197 16-54 (184)
296 PF14606 Lipase_GDSL_3: GDSL-l 32.2 88 0.0019 27.0 4.6 25 216-240 77-101 (178)
297 cd01833 XynB_like SGNH_hydrola 32.0 1.3E+02 0.0027 24.7 5.7 70 166-239 17-86 (157)
298 PF01935 DUF87: Domain of unkn 31.9 68 0.0015 28.5 4.2 35 165-199 27-62 (229)
299 TIGR03371 cellulose_yhjQ cellu 31.9 80 0.0017 28.3 4.8 40 162-201 3-42 (246)
300 cd03129 GAT1_Peptidase_E_like 31.7 1.4E+02 0.003 26.2 6.2 90 159-250 28-130 (210)
301 TIGR00365 monothiol glutaredox 31.6 2.3E+02 0.005 21.4 8.3 82 158-256 10-92 (97)
302 PRK06696 uridine kinase; Valid 31.2 84 0.0018 27.9 4.7 39 158-196 19-57 (223)
303 cd01836 FeeA_FeeB_like SGNH_hy 31.2 1.6E+02 0.0034 25.0 6.4 74 161-239 40-113 (191)
304 PRK00652 lpxK tetraacyldisacch 31.0 2E+02 0.0043 27.5 7.4 33 171-204 61-93 (325)
305 PTZ00062 glutaredoxin; Provisi 30.9 3.5E+02 0.0075 23.9 8.4 82 158-256 111-193 (204)
306 PLN02924 thymidylate kinase 30.3 1.2E+02 0.0026 27.0 5.5 42 158-199 13-54 (220)
307 cd07198 Patatin Patatin-like p 30.3 82 0.0018 26.7 4.3 33 221-254 15-47 (172)
308 PRK13768 GTPase; Provisional 30.2 80 0.0017 28.9 4.4 35 163-197 4-38 (253)
309 cd02037 MRP-like MRP (Multiple 30.0 95 0.0021 26.1 4.6 36 163-198 2-37 (169)
310 cd01521 RHOD_PspE2 Member of t 29.8 1.3E+02 0.0028 23.1 5.1 34 158-195 63-96 (110)
311 KOG0780 Signal recognition par 29.5 80 0.0017 30.9 4.3 38 158-195 98-135 (483)
312 KOG4389 Acetylcholinesterase/B 29.2 43 0.00094 33.6 2.5 105 162-270 137-255 (601)
313 PRK06171 sorbitol-6-phosphate 29.1 2.9E+02 0.0063 24.8 8.1 64 163-231 11-76 (266)
314 COG0552 FtsY Signal recognitio 29.1 93 0.002 29.7 4.6 38 158-195 136-173 (340)
315 PRK13700 conjugal transfer pro 28.8 81 0.0018 33.5 4.6 36 164-199 188-223 (732)
316 cd02067 B12-binding B12 bindin 28.5 2.8E+02 0.0062 21.5 7.8 33 162-196 2-34 (119)
317 COG3007 Uncharacterized paraqu 28.4 1.6E+02 0.0035 27.6 5.9 58 214-271 19-80 (398)
318 cd03028 GRX_PICOT_like Glutare 28.4 2.5E+02 0.0054 20.8 8.6 81 158-255 6-87 (90)
319 PRK00771 signal recognition pa 28.4 1E+02 0.0022 30.9 5.0 40 159-198 93-132 (437)
320 KOG1199 Short-chain alcohol de 28.2 3E+02 0.0065 23.7 7.0 69 159-231 7-82 (260)
321 PRK06523 short chain dehydroge 28.1 3.4E+02 0.0073 24.2 8.3 65 163-232 11-77 (260)
322 PRK10867 signal recognition pa 28.0 1E+02 0.0022 30.8 4.9 39 159-197 98-137 (433)
323 cd01523 RHOD_Lact_B Member of 27.9 1.1E+02 0.0024 22.9 4.3 34 158-199 60-93 (100)
324 PF00101 RuBisCO_small: Ribulo 27.9 2.9E+02 0.0062 21.3 7.7 64 178-241 16-83 (99)
325 PF02606 LpxK: Tetraacyldisacc 27.9 2.1E+02 0.0045 27.4 6.9 35 171-206 47-81 (326)
326 cd07212 Pat_PNPLA9 Patatin-lik 27.8 88 0.0019 29.7 4.4 32 221-252 16-51 (312)
327 COG0541 Ffh Signal recognition 27.7 1.2E+02 0.0025 30.2 5.1 45 151-195 90-134 (451)
328 TIGR02884 spore_pdaA delta-lac 27.5 62 0.0014 28.9 3.2 35 161-196 187-221 (224)
329 cd07225 Pat_PNPLA6_PNPLA7 Pata 27.3 88 0.0019 29.6 4.3 33 221-254 32-64 (306)
330 TIGR02759 TraD_Ftype type IV c 27.3 90 0.002 32.4 4.6 36 164-199 179-214 (566)
331 PRK05541 adenylylsulfate kinas 26.8 1E+02 0.0023 26.0 4.4 38 159-196 5-42 (176)
332 PHA02519 plasmid partition pro 26.3 1.7E+02 0.0036 28.8 6.1 45 159-203 104-150 (387)
333 COG3181 Uncharacterized protei 26.3 1.2E+02 0.0026 28.8 4.9 47 157-203 25-72 (319)
334 PRK13973 thymidylate kinase; P 25.9 1.5E+02 0.0032 26.2 5.3 39 161-199 3-41 (213)
335 cd07218 Pat_iPLA2 Calcium-inde 25.6 1.1E+02 0.0025 27.8 4.5 34 221-254 17-51 (245)
336 PRK05568 flavodoxin; Provision 25.5 3.1E+02 0.0068 22.0 6.9 79 162-241 4-91 (142)
337 TIGR03708 poly_P_AMP_trns poly 25.5 83 0.0018 31.9 3.9 74 158-246 296-370 (493)
338 TIGR03018 pepcterm_TyrKin exop 25.5 1.8E+02 0.004 25.4 5.8 40 159-198 34-74 (207)
339 cd02027 APSK Adenosine 5'-phos 25.4 87 0.0019 25.9 3.5 35 163-197 1-35 (149)
340 PRK09004 FMN-binding protein M 25.4 3.6E+02 0.0079 22.1 7.2 36 163-198 4-39 (146)
341 cd03115 SRP The signal recogni 25.4 1.2E+02 0.0026 25.5 4.5 36 163-198 2-37 (173)
342 cd07561 Peptidase_S41_CPP_like 25.3 2.7E+02 0.0059 25.5 7.0 40 162-202 67-106 (256)
343 PF02492 cobW: CobW/HypB/UreG, 25.3 83 0.0018 26.9 3.5 33 163-196 2-34 (178)
344 cd02032 Bchl_like This family 25.2 1.2E+02 0.0025 27.8 4.7 35 168-202 7-41 (267)
345 PRK07053 glutamine amidotransf 25.1 5.1E+02 0.011 23.3 9.0 83 161-253 4-102 (234)
346 PF10412 TrwB_AAD_bind: Type I 25.1 73 0.0016 31.2 3.4 36 164-199 18-53 (386)
347 TIGR01007 eps_fam capsular exo 25.0 1.8E+02 0.0039 25.2 5.7 39 160-198 17-55 (204)
348 PRK13705 plasmid-partitioning 24.9 1.5E+02 0.0033 29.0 5.6 43 161-203 107-150 (388)
349 PRK06179 short chain dehydroge 24.7 2.8E+02 0.0061 24.9 7.2 65 163-231 6-72 (270)
350 cd02028 UMPK_like Uridine mono 24.7 2.5E+02 0.0054 24.0 6.4 37 163-199 1-37 (179)
351 PLN02289 ribulose-bisphosphate 24.5 4.5E+02 0.0097 22.5 9.5 80 158-241 65-160 (176)
352 cd07207 Pat_ExoU_VipD_like Exo 24.4 1.1E+02 0.0024 26.3 4.1 32 221-253 16-47 (194)
353 PRK10279 hypothetical protein; 24.4 1.1E+02 0.0024 28.9 4.3 33 221-254 22-54 (300)
354 TIGR00959 ffh signal recogniti 24.2 1.4E+02 0.003 29.8 5.2 39 159-197 97-136 (428)
355 PF06866 DUF1256: Protein of u 24.2 3.4E+02 0.0074 23.0 6.7 73 159-245 24-99 (163)
356 PRK06731 flhF flagellar biosyn 24.1 5.8E+02 0.013 23.6 9.2 76 179-266 143-219 (270)
357 PRK09435 membrane ATPase/prote 24.1 1.5E+02 0.0032 28.5 5.1 39 159-197 54-92 (332)
358 PF05673 DUF815: Protein of un 24.0 1.2E+02 0.0025 27.8 4.2 35 164-198 55-89 (249)
359 PRK06114 short chain dehydroge 24.0 2.8E+02 0.0062 24.7 7.0 33 163-199 10-42 (254)
360 PTZ00445 p36-lilke protein; Pr 24.0 5.3E+02 0.011 23.1 9.9 90 178-269 31-142 (219)
361 PRK14489 putative bifunctional 24.0 1.3E+02 0.0028 29.2 4.8 43 160-202 204-246 (366)
362 TIGR01969 minD_arch cell divis 23.9 1.4E+02 0.0031 26.6 5.0 37 163-199 3-39 (251)
363 TIGR02764 spore_ybaN_pdaB poly 23.7 62 0.0013 27.9 2.4 35 162-196 153-188 (191)
364 TIGR01281 DPOR_bchL light-inde 23.6 1.3E+02 0.0029 27.4 4.7 35 168-202 7-41 (268)
365 TIGR03282 methan_mark_13 putat 23.5 1.7E+02 0.0036 28.1 5.2 73 161-247 19-91 (352)
366 PRK14494 putative molybdopteri 23.4 1.4E+02 0.0031 26.9 4.6 40 163-202 3-42 (229)
367 TIGR03453 partition_RepA plasm 23.2 1.6E+02 0.0034 28.8 5.4 42 161-202 105-146 (387)
368 COG3967 DltE Short-chain dehyd 23.1 1.5E+02 0.0033 26.4 4.5 57 179-235 19-81 (245)
369 smart00245 TSPc tail specific 22.9 2E+02 0.0044 24.9 5.5 55 162-228 31-85 (192)
370 cd03116 MobB Molybdenum is an 22.9 1.8E+02 0.0038 24.5 4.9 40 163-202 3-42 (159)
371 cd07208 Pat_hypo_Ecoli_yjju_li 22.8 1.2E+02 0.0027 27.7 4.3 36 221-256 15-50 (266)
372 TIGR01968 minD_bact septum sit 22.8 1.6E+02 0.0035 26.5 5.1 38 162-199 3-40 (261)
373 cd02042 ParA ParA and ParB of 22.6 1.6E+02 0.0036 22.1 4.4 28 171-198 10-37 (104)
374 PRK14974 cell division protein 22.4 1.6E+02 0.0034 28.3 5.0 38 159-196 138-175 (336)
375 COG0331 FabD (acyl-carrier-pro 22.4 1.1E+02 0.0023 29.1 3.8 30 223-252 74-104 (310)
376 cd04910 ACT_AK-Ectoine_1 ACT d 22.2 3E+02 0.0066 19.7 6.0 53 177-235 17-69 (71)
377 PRK13235 nifH nitrogenase redu 22.2 1.4E+02 0.003 27.4 4.6 38 163-201 4-41 (274)
378 KOG0781 Signal recognition par 22.1 4.8E+02 0.01 26.5 8.1 73 164-249 442-514 (587)
379 cd01822 Lysophospholipase_L1_l 22.1 4.5E+02 0.0098 21.6 7.7 73 161-239 36-108 (177)
380 cd07210 Pat_hypo_W_succinogene 22.1 1.5E+02 0.0032 26.5 4.5 31 222-253 18-48 (221)
381 cd03145 GAT1_cyanophycinase Ty 22.0 4.2E+02 0.0091 23.5 7.4 91 159-251 28-134 (217)
382 cd03818 GT1_ExpC_like This fam 22.0 1.8E+02 0.004 28.1 5.6 38 163-204 2-39 (396)
383 cd02034 CooC The accessory pro 21.7 1.6E+02 0.0034 23.3 4.1 33 165-197 3-35 (116)
384 PRK06398 aldose dehydrogenase; 21.7 3.9E+02 0.0084 24.0 7.4 63 163-232 8-72 (258)
385 PF13721 SecD-TM1: SecD export 21.6 1.3E+02 0.0028 23.3 3.5 25 29-53 3-27 (101)
386 cd07227 Pat_Fungal_NTE1 Fungal 21.6 1.4E+02 0.0029 27.8 4.3 33 221-254 27-59 (269)
387 PRK01906 tetraacyldisaccharide 21.5 2E+02 0.0043 27.7 5.4 33 171-204 68-100 (338)
388 PRK08220 2,3-dihydroxybenzoate 21.4 3.5E+02 0.0075 23.9 7.0 53 179-232 22-76 (252)
389 COG0278 Glutaredoxin-related p 21.4 1.9E+02 0.0041 22.4 4.2 74 158-248 13-88 (105)
390 PF08248 Tryp_FSAP: Tryptophyl 21.4 55 0.0012 14.6 0.8 7 91-97 2-8 (12)
391 PF06024 DUF912: Nucleopolyhed 21.3 62 0.0013 25.0 1.6 24 30-53 64-87 (101)
392 PF13191 AAA_16: AAA ATPase do 21.2 1.1E+02 0.0024 25.7 3.4 43 158-200 21-63 (185)
393 PRK07952 DNA replication prote 21.0 1.4E+02 0.003 27.2 4.2 34 163-196 101-134 (244)
394 cd07209 Pat_hypo_Ecoli_Z1214_l 21.0 1.4E+02 0.003 26.4 4.1 33 222-255 16-48 (215)
395 cd02040 NifH NifH gene encodes 21.0 2E+02 0.0043 26.1 5.3 40 163-203 4-43 (270)
396 PF00004 AAA: ATPase family as 20.8 1.3E+02 0.0028 23.5 3.6 35 164-201 1-35 (132)
397 PRK08116 hypothetical protein; 20.8 1.4E+02 0.0031 27.5 4.2 35 163-197 116-150 (268)
398 TIGR00128 fabD malonyl CoA-acy 20.7 1.2E+02 0.0026 27.9 3.9 21 232-252 82-102 (290)
399 TIGR00682 lpxK tetraacyldisacc 20.7 1.9E+02 0.0042 27.4 5.2 45 159-205 27-73 (311)
400 cd07224 Pat_like Patatin-like 20.6 1.5E+02 0.0033 26.6 4.3 34 221-254 16-50 (233)
401 PLN02335 anthranilate synthase 20.4 5E+02 0.011 23.1 7.6 87 159-252 17-109 (222)
402 PF09757 Arb2: Arb2 domain; I 20.4 34 0.00073 29.5 0.0 42 158-199 97-149 (178)
403 PRK05506 bifunctional sulfate 20.4 1.5E+02 0.0032 31.3 4.7 38 159-196 458-495 (632)
404 cd03811 GT1_WabH_like This fam 20.3 6.4E+02 0.014 22.7 10.6 39 162-200 2-40 (353)
405 cd02033 BchX Chlorophyllide re 20.3 2.1E+02 0.0045 27.4 5.3 37 162-198 32-68 (329)
406 TIGR02841 spore_YyaC putative 20.2 4.5E+02 0.0097 21.7 6.3 29 217-245 47-75 (140)
407 PF13207 AAA_17: AAA domain; P 20.2 1.2E+02 0.0027 23.4 3.3 31 163-197 1-32 (121)
408 PRK13869 plasmid-partitioning 20.1 2.4E+02 0.0053 27.8 6.0 42 161-202 122-163 (405)
409 PRK12745 3-ketoacyl-(acyl-carr 20.1 4.1E+02 0.0089 23.5 7.2 66 163-232 4-80 (256)
410 cd01838 Isoamyl_acetate_hydrol 20.0 3.3E+02 0.0071 22.9 6.3 78 162-240 33-115 (199)
No 1
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=1.8e-71 Score=521.23 Aligned_cols=362 Identities=41% Similarity=0.741 Sum_probs=331.7
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHhhhheeeecccccccccCCCeEEEeCCCchhHHHHhhccccccCCccCCCCCC
Q 015544 21 ALLFNALRLIPISHYVLALSLLFVIVIYNFLEFHFVEDLFSGFRGSPVRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLS 100 (405)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~l~~~y~p~~w~~ 100 (405)
.++++.....+...+++.+++.+.+++|.+.++++ ..+++.+.+. ++++.++++++||.++++|.|++|++
T Consensus 3 ~l~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~l~~~-~~~f~~~l~~~~~~l~~~y~p~~w~~ 73 (409)
T KOG1838|consen 3 LLLFQSLLGPVLSPVLLGLLIGVAVVLYAFLYLKS--------PPRKPSLFCG-DSGFARFLVPKCPLLEEKYLPTLWLF 73 (409)
T ss_pred cccccccccccccHHHHHHhhhhheeeeecceeec--------cCCCCeeecC-chHHHHHHHhhccccccccccceeec
Confidence 45666666777787888877887888899999888 4556666555 57899999999999999999999999
Q ss_pred cccHHhHhhhhhCCCCCCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHH
Q 015544 101 SPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH 180 (405)
Q Consensus 101 ~~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~ 180 (405)
+||+||++..+++++|.+.|+|++++++|||++++||+.+++..+. ..+++.|+||++||++|+|++.|+++
T Consensus 74 ~ghlQT~~~~~~~~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~--------~~~~~~P~vvilpGltg~S~~~YVr~ 145 (409)
T KOG1838|consen 74 SGHLQTLLLSFFGSKPPVEYTREIIKTSDGGTVTLDWVENPDSRCR--------TDDGTDPIVVILPGLTGGSHESYVRH 145 (409)
T ss_pred CCeeeeeehhhcCCCCCCcceeEEEEeCCCCEEEEeeccCcccccC--------CCCCCCcEEEEecCCCCCChhHHHHH
Confidence 9999999999999999999999999999999999999987763110 12467899999999999999999999
Q ss_pred HHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCc
Q 015544 181 LVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPV 260 (405)
Q Consensus 181 ~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v 260 (405)
++..++++||+||++|+||+|+++.+++++|+++|++|+++++++++++||++|++++|+||||+++++|++|.++++++
T Consensus 146 lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l 225 (409)
T KOG1838|consen 146 LVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPL 225 (409)
T ss_pred HHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcc-cccccCCHHHHhcCCCHHHHhhhcccccCCCCCH
Q 015544 261 AGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEP-RYSRLANWEGIKKSRSIRDFDSHATCLVGKFETV 339 (405)
Q Consensus 261 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~ 339 (405)
.|++++|+|||.....+.+.+...+++|+++++.++++++..|++ .+.+..+++.+.++++++|||+.+|++++||+++
T Consensus 226 ~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~ 305 (409)
T KOG1838|consen 226 IAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSV 305 (409)
T ss_pred eeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcH
Confidence 999999999999888888999999999999999999999999988 6667789999999999999999999999999999
Q ss_pred HHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcCCcEEEEeec---cCccccc
Q 015544 340 DTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSNCSIHAIVSI---FTSFYVP 399 (405)
Q Consensus 340 ~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~t~---~~~~~~~ 399 (405)
++||+++|+.+++++|++|+|+||+.|||++|++++|++++++|||+.+++|. |.+|..+
T Consensus 306 deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 306 DEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred HHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 99999999999999999999999999999999999999999999999999994 4444443
No 2
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=100.00 E-value=4.8e-55 Score=396.16 Aligned_cols=291 Identities=32% Similarity=0.522 Sum_probs=267.3
Q ss_pred CccC-CCCCCcccHHhHhh--hhhCCCCCCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCC
Q 015544 92 RYLV-TPWLSSPHIQTAFL--HFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPG 168 (405)
Q Consensus 92 ~y~p-~~w~~~~~~qt~~~--~~~~~~~~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG 168 (405)
.|.| ++|++|||+||++. ..+++.+.+.|+||++.++||+.+.+||..++. +..+|.||++||
T Consensus 18 ~f~p~~~~L~ng~lqTl~~~~~~frr~~~~~~~re~v~~pdg~~~~ldw~~~p~--------------~~~~P~vVl~HG 83 (345)
T COG0429 18 PFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRERLETPDGGFIDLDWSEDPR--------------AAKKPLVVLFHG 83 (345)
T ss_pred cCCCCcccccCcchhhhhhhHHHhhcccccccceEEEEcCCCCEEEEeeccCcc--------------ccCCceEEEEec
Confidence 5677 78999999999998 667889999999999999999999999998754 457799999999
Q ss_pred CCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHH
Q 015544 169 LTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILV 248 (405)
Q Consensus 169 ~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~ 248 (405)
++|++.+.|++.+++.+.++||.||++|.|||+++..+++++|+.|+++|++.++++++++++..|++++|+|+||+++.
T Consensus 84 L~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa 163 (345)
T COG0429 84 LEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLA 163 (345)
T ss_pred cCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCceEEEEEcCCCChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccc-c-CC-HHHHhcCCCHHHH
Q 015544 249 KYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR-L-AN-WEGIKKSRSIRDF 325 (405)
Q Consensus 249 ~yl~~~~~~~~v~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~f 325 (405)
+|+++.++++++.+++.+|.|+|+..+...+.+.+..++|++.+...+++.+..+...+.. . .+ .+.+++.++++||
T Consensus 164 ~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eF 243 (345)
T COG0429 164 NYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREF 243 (345)
T ss_pred HHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhc
Confidence 9999999999999999999999999999998887655899999999998887776655522 1 22 5678889999999
Q ss_pred hhhcccccCCCCCHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcCCcEEEEeeccCcc
Q 015544 326 DSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSNCSIHAIVSIFTSF 396 (405)
Q Consensus 326 d~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~t~~~~~ 396 (405)
|+.+|.+.+||.++++||+++|+...|++|++|+|+||+.|||+++++.+|...+..||++.++.|.+-+|
T Consensus 244 D~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGH 314 (345)
T COG0429 244 DDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGH 314 (345)
T ss_pred cceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCce
Confidence 99999999999999999999999999999999999999999999999999998888999999999955444
No 3
>PLN02511 hydrolase
Probab=100.00 E-value=1.3e-50 Score=395.46 Aligned_cols=320 Identities=36% Similarity=0.638 Sum_probs=268.0
Q ss_pred CeEEEeCCCchhHHHHhhccccccCCccCCCCCCcccHHhHhhhhhCCCCCCCcceEEEEcCCCCEEEEEeccCCCCCCC
Q 015544 67 PVRLTFNSSSPIYDGVVSKCKIVHGRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGD 146 (405)
Q Consensus 67 ~~~l~~~~~~~~~~~~~~~~p~l~~~y~p~~w~~~~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~ 146 (405)
++..+++.....+++++++||.|.++|.|+||++|||+||++..++++.+.+.|+|+.+.++||+++.+||..+...
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re~l~~~DG~~~~ldw~~~~~~--- 94 (388)
T PLN02511 18 REHSSLEVIGGGRDSFLPKFKSLERPYDAFPLLGNRHVETIFASFFRSLPAVRYRRECLRTPDGGAVALDWVSGDDR--- 94 (388)
T ss_pred CCccceeeccchHHHHHHhhhhhcCCccCCccCCCccHHHhhHHHhcCCCCCceeEEEEECCCCCEEEEEecCcccc---
Confidence 34444444445689999999999999999999999999999999998888899999999999999999999864321
Q ss_pred ccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHH
Q 015544 147 VFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYL 226 (405)
Q Consensus 147 ~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l 226 (405)
...+++|+||++||++|++.+.|++.++..+.++||+|+++|+||||+|+.+.++.+..++++|+.++++++
T Consensus 95 --------~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l 166 (388)
T PLN02511 95 --------ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHV 166 (388)
T ss_pred --------cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHH
Confidence 023467999999999998888788889988889999999999999999998878888889999999999999
Q ss_pred HHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhccc
Q 015544 227 HHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPR 306 (405)
Q Consensus 227 ~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 306 (405)
+.++++.+++++||||||+++++|++++++..+|++++++++|+++......+... ...+|+..+...+++....+...
T Consensus 167 ~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~-~~~~y~~~~~~~l~~~~~~~~~~ 245 (388)
T PLN02511 167 AGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG-FNNVYDKALAKALRKIFAKHALL 245 (388)
T ss_pred HHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999889999999999999999999999855699999999999975554444443 24567777766666655443332
Q ss_pred ccc---cCCHHHHhcCCCHHHHhhhcccccCCCCCHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcC
Q 015544 307 YSR---LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSN 383 (405)
Q Consensus 307 ~~~---~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~ 383 (405)
+.. ..+...+.+.+++++|++.++.+..||.+.++||+.+++...+++|++|+|+|+|+||+++|.+..+...++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~ 325 (388)
T PLN02511 246 FEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN 325 (388)
T ss_pred HhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC
Confidence 221 23556677789999999999999999999999999999999999999999999999999999988777778889
Q ss_pred CcEEEEeeccCcccc
Q 015544 384 CSIHAIVSIFTSFYV 398 (405)
Q Consensus 384 ~~~~l~~t~~~~~~~ 398 (405)
|++.++++...+|..
T Consensus 326 p~~~l~~~~~gGH~~ 340 (388)
T PLN02511 326 PNCLLIVTPSGGHLG 340 (388)
T ss_pred CCEEEEECCCcceec
Confidence 999999985554443
No 4
>PRK10985 putative hydrolase; Provisional
Probab=100.00 E-value=4.4e-44 Score=342.32 Aligned_cols=294 Identities=27% Similarity=0.406 Sum_probs=245.6
Q ss_pred CCccCCCCCCcccHHhHhhhhhCCCCCCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCC
Q 015544 91 GRYLVTPWLSSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT 170 (405)
Q Consensus 91 ~~y~p~~w~~~~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~ 170 (405)
.+|.||||+.|+|+||++..++++.+.++++++.++++||+.+.++|...+. ..+.+|+||++||++
T Consensus 2 ~~~~p~~~~~~~h~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~l~w~~~~~-------------~~~~~p~vll~HG~~ 68 (324)
T PRK10985 2 AEFTPMRGASNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAWSEDPA-------------QARHKPRLVLFHGLE 68 (324)
T ss_pred CCCCCCcCCCCCcHHHhhHHHhcCCCCCCcceeEEECCCCCEEEEecCCCCc-------------cCCCCCEEEEeCCCC
Confidence 4799999999999999999999888889999999999999999999975433 134679999999999
Q ss_pred CCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHH
Q 015544 171 SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 250 (405)
Q Consensus 171 g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~y 250 (405)
|++.+.|++.++..+.++||+|+++|+||||+++...++.+..++.+|+.+++++++++++..+++++||||||++++.|
T Consensus 69 g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~ 148 (324)
T PRK10985 69 GSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACL 148 (324)
T ss_pred CCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHH
Confidence 88778888889999999999999999999999877666777778899999999999999888899999999999999999
Q ss_pred HhhcCCCCCceEEEEEcCCCChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccc--cCCHHHHhcCCCHHHHhhh
Q 015544 251 LGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR--LANWEGIKKSRSIRDFDSH 328 (405)
Q Consensus 251 l~~~~~~~~v~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~fd~~ 328 (405)
+++++++.+++++|++++|++...+...+.+. ..++|++.+...+++........+.. ..+.+.+.+.+++++||+.
T Consensus 149 ~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 227 (324)
T PRK10985 149 LAKEGDDLPLDAAVIVSAPLMLEACSYRMEQG-FSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDL 227 (324)
T ss_pred HHhhCCCCCccEEEEEcCCCCHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhh
Confidence 99987754699999999999987766555543 34567776666666544333222222 2355677888999999999
Q ss_pred cccccCCCCCHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcCCcEEEEeeccCccccc
Q 015544 329 ATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSNCSIHAIVSIFTSFYVP 399 (405)
Q Consensus 329 ~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~t~~~~~~~~ 399 (405)
++.+.+||.+..+||...+....+++|++|+|+|+|++|++++.+..+. ..+.++++.++++...+|...
T Consensus 228 ~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~GH~~~ 297 (324)
T PRK10985 228 ITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPK-PESLPPNVEYQLTEHGGHVGF 297 (324)
T ss_pred heeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChH-HHHhCCCeEEEECCCCCceee
Confidence 9999999999999999999889999999999999999999999887665 346778988888755555443
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=9.9e-23 Score=195.57 Aligned_cols=139 Identities=15% Similarity=0.178 Sum_probs=106.9
Q ss_pred CCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 118 ~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
+++++..++..||.++.+..+.+++ ..+.+++||++||++++. .++...++..++++||+|+++|+
T Consensus 30 ~~~~~~~~~~~dg~~l~~~~~~~~~-------------~~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D~ 95 (330)
T PLN02298 30 IKGSKSFFTSPRGLSLFTRSWLPSS-------------SSPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALDL 95 (330)
T ss_pred CccccceEEcCCCCEEEEEEEecCC-------------CCCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEecC
Confidence 5667888999999999986544432 124568999999996543 33346778889999999999999
Q ss_pred CCCCCCCCCCCCccc-CCChhHHHHHHHHHHHh--CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 198 RGLGGVSITSDCFYN-AGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 198 rG~G~s~~~~~~~~~-~~~~~Dl~~~l~~l~~~--~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
||||.|+........ ....+|+.+++++++.. ++..+++++||||||++++.++.++|+ +++++|++++....
T Consensus 96 rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~ 171 (330)
T PLN02298 96 EGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKI 171 (330)
T ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccC
Confidence 999998743221111 23468999999999764 345689999999999999999998887 79999999986543
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.89 E-value=2.1e-22 Score=194.78 Aligned_cols=137 Identities=14% Similarity=0.152 Sum_probs=99.9
Q ss_pred CCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 118 ~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
+.+++..+..+||.++....+.|++ .+.+|+||++||++++ ...|++.++..++++||+|+++|+
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~--------------~~~~~~iv~lHG~~~~-~~~~~~~~~~~l~~~g~~v~~~D~ 123 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPEN--------------SRPKAAVCFCHGYGDT-CTFFFEGIARKIASSGYGVFAMDY 123 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCC--------------CCCCeEEEEECCCCCc-cchHHHHHHHHHHhCCCEEEEecC
Confidence 3344444555666665544332321 2456899999999654 344557889999989999999999
Q ss_pred CCCCCCCCCCCCccc-CCChhHHHHHHHHHHHh--CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 198 RGLGGVSITSDCFYN-AGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 198 rG~G~s~~~~~~~~~-~~~~~Dl~~~l~~l~~~--~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
||||.|+.......+ ..+.+|+.++++.+..+ ++..+++++||||||.+++.++.++|+ +++++|++++...
T Consensus 124 ~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~ 198 (349)
T PLN02385 124 PGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCK 198 (349)
T ss_pred CCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcc--hhhheeEeccccc
Confidence 999999764322212 24567888888887653 445689999999999999999999998 7999999998654
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.89 E-value=6.5e-22 Score=184.94 Aligned_cols=129 Identities=17% Similarity=0.211 Sum_probs=101.2
Q ss_pred EEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC
Q 015544 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (405)
Q Consensus 124 ~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s 203 (405)
.+..+||..+.+.++.|.+ ..+|+|+++||+++ +...| ..+++.++++||+|+++|+||||.|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~---------------~~~~~v~llHG~~~-~~~~~-~~~~~~l~~~g~~via~D~~G~G~S 66 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT---------------YPKALVFISHGAGE-HSGRY-EELAENISSLGILVFSHDHIGHGRS 66 (276)
T ss_pred eeecCCCCEEEEEeccCCC---------------CCCEEEEEeCCCcc-ccchH-HHHHHHHHhCCCEEEEccCCCCCCC
Confidence 4566799999987665532 34588888899964 44445 8899999999999999999999998
Q ss_pred CCCCCCccc-CCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 204 SITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 204 ~~~~~~~~~-~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
+........ ..+.+|+.+.++.+++.++..+++++||||||.+++.++.++++ +++++|++++..+
T Consensus 67 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~ 133 (276)
T PHA02857 67 NGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVN 133 (276)
T ss_pred CCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccc
Confidence 753211111 23457888888888777787899999999999999999999888 7999999998654
No 8
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.87 E-value=8.4e-21 Score=178.34 Aligned_cols=249 Identities=17% Similarity=0.172 Sum_probs=153.8
Q ss_pred cceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 120 ~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
..+..+...||..+.+.-+.++. +.+.+||++||+. .+...| ..+++.+..+||.|+++|+||
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~---------------~~~g~Vvl~HG~~-Eh~~ry-~~la~~l~~~G~~V~~~D~RG 71 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPE---------------PPKGVVVLVHGLG-EHSGRY-EELADDLAARGFDVYALDLRG 71 (298)
T ss_pred cccceeecCCCceEEEEeecCCC---------------CCCcEEEEecCch-HHHHHH-HHHHHHHHhCCCEEEEecCCC
Confidence 35677888899988877554432 2337899999995 456667 789999999999999999999
Q ss_pred CCCCC-CCCCCccc-CCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHH
Q 015544 200 LGGVS-ITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR 277 (405)
Q Consensus 200 ~G~s~-~~~~~~~~-~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~ 277 (405)
||.|. ......-. ..+.+|+.++++.+...++..+++++||||||.|++.|+.+++. +++++|+.+|.+.+.. .
T Consensus 72 hG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--~i~~~vLssP~~~l~~--~ 147 (298)
T COG2267 72 HGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--RIDGLVLSSPALGLGG--A 147 (298)
T ss_pred CCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--cccEEEEECccccCCh--h
Confidence 99997 33222211 24567999999999888888999999999999999999999996 8999999999877753 0
Q ss_pred HHhhhhHHHHHHHHHHHhHHHHHHh--hcccccccCCHHHHhcCCCHHHHhhhccccc--CCCCC---HHHHHHhCC--C
Q 015544 278 FIGRRLIQKIYDRALTIGLQDYAQL--HEPRYSRLANWEGIKKSRSIRDFDSHATCLV--GKFET---VDTYYRNCS--S 348 (405)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~--~g~~~---~~~yy~~~s--~ 348 (405)
.. ...........+.+.... .............+ ++.....+.....+. .+..+ +..+..... .
T Consensus 148 ~~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~ 220 (298)
T COG2267 148 IL-----RLILARLALKLLGRIRPKLPVDSNLLEGVLTDDL--SRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPA 220 (298)
T ss_pred HH-----HHHHHHHhcccccccccccccCcccccCcCcchh--hcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccc
Confidence 00 011111111111111000 00000000111111 222222222222221 22221 222222222 2
Q ss_pred ccccCcccCcEEEEeeCCCCcCC-CCC-CChHHHhcCCcEEEEeeccCcc
Q 015544 349 STYVGNVSIPLLCISSLDDPVCT-VEA-IPWDECRSNCSIHAIVSIFTSF 396 (405)
Q Consensus 349 ~~~l~~I~vP~Lii~g~dD~ivp-~~~-~~~~~~~~~~~~~l~~t~~~~~ 396 (405)
.....++++|+|+++|++|++++ .+. ..+.+....++..+.+-....+
T Consensus 221 ~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~H 270 (298)
T COG2267 221 LRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYH 270 (298)
T ss_pred hhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcch
Confidence 33467889999999999999999 453 3334556677766666544333
No 9
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=6.8e-21 Score=176.29 Aligned_cols=134 Identities=16% Similarity=0.103 Sum_probs=104.4
Q ss_pred ceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCC
Q 015544 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (405)
Q Consensus 121 ~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~ 200 (405)
..+.+.+.||.++..+|..|.+. .....++||++||+++. ... ...+++.|+++||.|+.+|.||+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~------------~~~~~~~vIi~HGf~~~-~~~-~~~~A~~La~~G~~vLrfD~rg~ 75 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKEN------------SPKKNNTILIASGFARR-MDH-FAGLAEYLSSNGFHVIRYDSLHH 75 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCccc------------CCCCCCEEEEeCCCCCC-hHH-HHHHHHHHHHCCCEEEEecCCCC
Confidence 46789999999999888776531 23567899999999774 333 48899999999999999999998
Q ss_pred -CCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChh
Q 015544 201 -GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 201 -G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
|.|++...........+|+.++++|++++. ..++.++||||||.++...+++ . +++++|+.||..++.
T Consensus 76 ~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~--~--~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 76 VGLSSGTIDEFTMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINE--I--DLSFLITAVGVVNLR 144 (307)
T ss_pred CCCCCCccccCcccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcC--C--CCCEEEEcCCcccHH
Confidence 888764332222234689999999998864 4589999999999998655542 2 489999999888763
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=1.6e-20 Score=178.00 Aligned_cols=133 Identities=17% Similarity=0.224 Sum_probs=94.1
Q ss_pred CCCCCCcceEEEEcCC--CCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCe
Q 015544 114 RPPCFSYRRQLFRLSD--GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN 191 (405)
Q Consensus 114 ~~~~~~~~r~~~~~~d--g~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~ 191 (405)
..+.+++....+.+.+ |+...+.+... ++++.|+||++||++++ ...| ..+++.|.++||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~i~y~~~---------------G~~~~~~lvliHG~~~~-~~~w-~~~~~~L~~~gy~ 75 (302)
T PRK00870 13 NLPDYPFAPHYVDVDDGDGGPLRMHYVDE---------------GPADGPPVLLLHGEPSW-SYLY-RKMIPILAAAGHR 75 (302)
T ss_pred CCcCCCCCceeEeecCCCCceEEEEEEec---------------CCCCCCEEEEECCCCCc-hhhH-HHHHHHHHhCCCE
Confidence 3455666666676664 55555554432 12345789999998653 4445 7889999888999
Q ss_pred EEEEeCCCCCCCCCCCC-Cccc-CCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 192 VVVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 192 vv~~d~rG~G~s~~~~~-~~~~-~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
|+++|+||||.|+.... ..++ ..+.+|+.++++.+ ...+++++||||||.++..++.++|+ +++++|++++.
T Consensus 76 vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 149 (302)
T PRK00870 76 VIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHPD--RFARLVVANTG 149 (302)
T ss_pred EEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhChh--heeEEEEeCCC
Confidence 99999999999965422 1222 22334555554443 44589999999999999999999988 89999999864
No 11
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.85 E-value=2.4e-20 Score=168.14 Aligned_cols=235 Identities=14% Similarity=0.118 Sum_probs=148.7
Q ss_pred CCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 117 ~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
.+.+....++.++|..+-..|+.|.. +...+..|+++||+++.+...| ..++..|+..||.|+++|
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~-------------~~~pr~lv~~~HG~g~~~s~~~-~~~a~~l~~~g~~v~a~D 89 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLS-------------GTEPRGLVFLCHGYGEHSSWRY-QSTAKRLAKSGFAVYAID 89 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCC-------------CCCCceEEEEEcCCcccchhhH-HHHHHHHHhCCCeEEEee
Confidence 45566778899999888777665543 2356778999999987655556 889999999999999999
Q ss_pred CCCCCCCCCCCCCcccC-CChhHHHHHHHHHHH--hCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChh
Q 015544 197 HRGLGGVSITSDCFYNA-GWTEDAREVIGYLHH--EYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 197 ~rG~G~s~~~~~~~~~~-~~~~Dl~~~l~~l~~--~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
++|||.|++........ ...+|+...++.++. .++..+.++.||||||.+++.++.++|. ..+|+|+++|...+.
T Consensus 90 ~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 90 YEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKIS 167 (313)
T ss_pred ccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeecccccC
Confidence 99999999765554432 345788888887654 4677899999999999999999998887 789999998866553
Q ss_pred hhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccccCCC---CCHHHHHHhCCC-c
Q 015544 274 IGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKF---ETVDTYYRNCSS-S 349 (405)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~---~~~~~yy~~~s~-~ 349 (405)
.... . .++... +...+...++..+ ........+.+.+....++....-.-...|. ++..+..+.+.. .
T Consensus 168 ~~~k--p----~p~v~~-~l~~l~~liP~wk-~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le 239 (313)
T KOG1455|consen 168 EDTK--P----HPPVIS-ILTLLSKLIPTWK-IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLE 239 (313)
T ss_pred CccC--C----CcHHHH-HHHHHHHhCCcee-ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHH
Confidence 2210 0 111111 1111112221111 1110000111111111111111100111222 233344443332 2
Q ss_pred cccCcccCcEEEEeeCCCCcCCCCCC
Q 015544 350 TYVGNVSIPLLCISSLDDPVCTVEAI 375 (405)
Q Consensus 350 ~~l~~I~vP~Lii~g~dD~ivp~~~~ 375 (405)
..++++++|.+++||++|.++.++..
T Consensus 240 ~~l~~vtvPflilHG~dD~VTDp~~S 265 (313)
T KOG1455|consen 240 KNLNEVTVPFLILHGTDDKVTDPKVS 265 (313)
T ss_pred HhcccccccEEEEecCCCcccCcHHH
Confidence 56889999999999999999998743
No 12
>PRK10749 lysophospholipase L2; Provisional
Probab=99.85 E-value=2.7e-20 Score=178.65 Aligned_cols=144 Identities=18% Similarity=0.264 Sum_probs=106.7
Q ss_pred cHHhHhhhhhCCCCCCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHH
Q 015544 103 HIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLV 182 (405)
Q Consensus 103 ~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~ 182 (405)
..|+....++. ..+...+...||..+.+..+.++ +.+++||++||+++ +...| ..++
T Consensus 18 ~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~----------------~~~~~vll~HG~~~-~~~~y-~~~~ 74 (330)
T PRK10749 18 FTMGPLLDFWR-----QREEAEFTGVDDIPIRFVRFRAP----------------HHDRVVVICPGRIE-SYVKY-AELA 74 (330)
T ss_pred HHHHHHHHHHh-----hccceEEEcCCCCEEEEEEccCC----------------CCCcEEEEECCccc-hHHHH-HHHH
Confidence 35565555541 22445666778888877644322 24578999999964 34455 7788
Q ss_pred HHHhhCCCeEEEEeCCCCCCCCCCCCC-----ccc-CCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC
Q 015544 183 FNTAKRGWNVVVSNHRGLGGVSITSDC-----FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE 256 (405)
Q Consensus 183 ~~l~~~Gy~vv~~d~rG~G~s~~~~~~-----~~~-~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~ 256 (405)
..++++||+|+++|+||||.|+...+. ... ..+.+|+.++++.+.+.++..+++++||||||.+++.++.++++
T Consensus 75 ~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~ 154 (330)
T PRK10749 75 YDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG 154 (330)
T ss_pred HHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC
Confidence 888899999999999999999753221 111 24557888888887776677899999999999999999999988
Q ss_pred CCCceEEEEEcCCCC
Q 015544 257 KTPVAGAAAICSPWD 271 (405)
Q Consensus 257 ~~~v~~~v~i~~~~~ 271 (405)
.++++|++++...
T Consensus 155 --~v~~lvl~~p~~~ 167 (330)
T PRK10749 155 --VFDAIALCAPMFG 167 (330)
T ss_pred --CcceEEEECchhc
Confidence 7999999987654
No 13
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.83 E-value=4.3e-19 Score=173.15 Aligned_cols=135 Identities=19% Similarity=0.260 Sum_probs=100.4
Q ss_pred ceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCC
Q 015544 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (405)
Q Consensus 121 ~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~ 200 (405)
....+..+||..+.+..+.|.. .+.+|+||++||++++ ...| ..+++.++++||+|+++|+|||
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~--------------~~~~~~Vl~lHG~~~~-~~~~-~~~a~~L~~~Gy~V~~~D~rGh 174 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAA--------------GEMRGILIIIHGLNEH-SGRY-LHFAKQLTSCGFGVYAMDWIGH 174 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCC--------------CCCceEEEEECCchHH-HHHH-HHHHHHHHHCCCEEEEeCCCCC
Confidence 3345566777777666444422 2456899999999653 3445 7899999999999999999999
Q ss_pred CCCCCCCCCccc-CCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC-CCCceEEEEEcCCCCh
Q 015544 201 GGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDL 272 (405)
Q Consensus 201 G~s~~~~~~~~~-~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~-~~~v~~~v~i~~~~~~ 272 (405)
|.|+........ ..+.+|+.++++++..+++..+++++||||||.+++.++. +++ ...++++|+.+|....
T Consensus 175 G~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 175 GGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRV 247 (395)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccccc
Confidence 999765332222 2335799999999998888779999999999999997764 443 2269999998876554
No 14
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.83 E-value=9e-20 Score=172.20 Aligned_cols=101 Identities=13% Similarity=0.162 Sum_probs=80.1
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
.|+||++||+.++ ...| +.+++.|.+++ +|+++|+||+|.|+.+........+.+|+.++++.+. ..+++++|
T Consensus 27 g~~vvllHG~~~~-~~~w-~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~----~~~~~lvG 99 (295)
T PRK03592 27 GDPIVFLHGNPTS-SYLW-RNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG----LDDVVLVG 99 (295)
T ss_pred CCEEEEECCCCCC-HHHH-HHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCeEEEE
Confidence 4679999999653 4444 78899998875 9999999999999865433222344567766666653 35899999
Q ss_pred EcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 240 TSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
|||||.+++.++.++|+ +++++|+++++
T Consensus 100 hS~Gg~ia~~~a~~~p~--~v~~lil~~~~ 127 (295)
T PRK03592 100 HDWGSALGFDWAARHPD--RVRGIAFMEAI 127 (295)
T ss_pred ECHHHHHHHHHHHhChh--heeEEEEECCC
Confidence 99999999999999998 89999999974
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=1.9e-19 Score=169.87 Aligned_cols=102 Identities=21% Similarity=0.295 Sum_probs=79.0
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCC------ccc-CCChhHHHHHHHHHHHhCCC
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC------FYN-AGWTEDAREVIGYLHHEYPK 232 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~------~~~-~~~~~Dl~~~l~~l~~~~~~ 232 (405)
.|+||++||+.+++ ..| +.++..+.++ |+|+++|+||+|.|+...+. .++ ..+.+|+.++++.+. .
T Consensus 29 ~~~vlllHG~~~~~-~~w-~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~----~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNA-DHW-RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV----G 101 (294)
T ss_pred CCeEEEECCCCCCh-hHH-HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhc----C
Confidence 47899999997654 444 7888888876 69999999999999865321 222 234456666665543 3
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 233 ~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
.+++++||||||.+++.++.++|+ +|+++|+++++.
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~~~ 137 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINISL 137 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECCCc
Confidence 589999999999999999999998 899999999754
No 16
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.82 E-value=1.7e-19 Score=168.72 Aligned_cols=104 Identities=15% Similarity=0.201 Sum_probs=80.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lv 238 (405)
..|+||++||+++++ ..| +.+++.|.+ +|+|+++|+||||.|+..........+.+|+.++++.+. ..+++++
T Consensus 24 ~~~plvllHG~~~~~-~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~Lv 96 (276)
T TIGR02240 24 GLTPLLIFNGIGANL-ELV-FPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAI 96 (276)
T ss_pred CCCcEEEEeCCCcch-HHH-HHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEE
Confidence 446789999986644 444 778888766 699999999999999754322112344567777777663 3479999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 239 G~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
||||||.+++.++.++|+ +++++|+++++..
T Consensus 97 G~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~ 127 (276)
T TIGR02240 97 GVSWGGALAQQFAHDYPE--RCKKLILAATAAG 127 (276)
T ss_pred EECHHHHHHHHHHHHCHH--HhhheEEeccCCc
Confidence 999999999999999998 8999999998754
No 17
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.82 E-value=1.4e-19 Score=173.40 Aligned_cols=132 Identities=20% Similarity=0.292 Sum_probs=97.7
Q ss_pred EEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHH------------------------HH
Q 015544 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI------------------------RH 180 (405)
Q Consensus 125 ~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~------------------------~~ 180 (405)
+...||..+....+.++ +.+.+|+++||+++++...|+ ..
T Consensus 2 ~~~~~g~~l~~~~~~~~----------------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~ 65 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK----------------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDS 65 (332)
T ss_pred ccCCCCCeEEEeeeecc----------------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHH
Confidence 34568888866544332 356799999999877654544 35
Q ss_pred HHHHHhhCCCeEEEEeCCCCCCCCCCCC-CcccC---CChhHHHHHHHHHHH-------------------hCC-CCcEE
Q 015544 181 LVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYNA---GWTEDAREVIGYLHH-------------------EYP-KAPLF 236 (405)
Q Consensus 181 ~~~~l~~~Gy~vv~~d~rG~G~s~~~~~-~~~~~---~~~~Dl~~~l~~l~~-------------------~~~-~~~i~ 236 (405)
+++.|.++||+|+++|+||||.|..... +.+.. ...+|+.++++.+++ ++| +.|++
T Consensus 66 ~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (332)
T TIGR01607 66 WIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMY 145 (332)
T ss_pred HHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCcee
Confidence 7899999999999999999999875422 22212 234688888887765 466 67999
Q ss_pred EEEEcHHHHHHHHHHhhcCCC------CCceEEEEEcCCCCh
Q 015544 237 AIGTSIGANILVKYLGEEGEK------TPVAGAAAICSPWDL 272 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~------~~v~~~v~i~~~~~~ 272 (405)
++||||||++++.++.+.+.. ..++|+|++++++.+
T Consensus 146 l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i 187 (332)
T TIGR01607 146 IIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISI 187 (332)
T ss_pred EeeccCccHHHHHHHHHhccccccccccccceEEEeccceEE
Confidence 999999999999998765431 259999999988754
No 18
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.81 E-value=1.5e-18 Score=170.60 Aligned_cols=134 Identities=20% Similarity=0.166 Sum_probs=99.8
Q ss_pred CCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 118 ~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
...++..+...||.++...++.|.. +...|+||++||+.+ ....++..++..++++||+|+++|+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~--------------~~~~P~Vli~gG~~~-~~~~~~~~~~~~La~~Gy~vl~~D~ 230 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKG--------------DGPFPTVLVCGGLDS-LQTDYYRLFRDYLAPRGIAMLTIDM 230 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCC--------------CCCccEEEEeCCccc-chhhhHHHHHHHHHhCCCEEEEECC
Confidence 3456777888888788877666542 246788888888754 3333347788899999999999999
Q ss_pred CCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 198 rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
||+|.|.... ..........++++++.... ...++.++||||||++++.++..+++ +++++|+++++.+
T Consensus 231 pG~G~s~~~~---~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~ 301 (414)
T PRK05077 231 PSVGFSSKWK---LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVH 301 (414)
T ss_pred CCCCCCCCCC---ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccc
Confidence 9999885421 11112233457788887653 34689999999999999999988887 7999999998875
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.81 E-value=2.7e-19 Score=167.48 Aligned_cols=103 Identities=10% Similarity=0.116 Sum_probs=76.2
Q ss_pred CcEEEEeCCCCCCCccHHH--HHHHHHHhhCCCeEEEEeCCCCCCCCCCCCC-cccCCChhHHHHHHHHHHHhCCCCcEE
Q 015544 160 TPIAIVIPGLTSDSAASYI--RHLVFNTAKRGWNVVVSNHRGLGGVSITSDC-FYNAGWTEDAREVIGYLHHEYPKAPLF 236 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~--~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~-~~~~~~~~Dl~~~l~~l~~~~~~~~i~ 236 (405)
.|+||++||++++.. .|- ...+..+.+.||+|+++|+||+|.|+..... .......+|+.++++.+. ..+++
T Consensus 30 ~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~----~~~~~ 104 (282)
T TIGR03343 30 GEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALD----IEKAH 104 (282)
T ss_pred CCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcC----CCCee
Confidence 467999999865433 221 2334566677999999999999999754221 111123567777666653 45899
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
++||||||.+++.++.++|+ +++++|+++++
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 135 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPD--RIGKLILMGPG 135 (282)
T ss_pred EEEECchHHHHHHHHHhChH--hhceEEEECCC
Confidence 99999999999999999988 89999999875
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.81 E-value=4.3e-19 Score=162.72 Aligned_cols=105 Identities=17% Similarity=0.202 Sum_probs=78.2
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCccc-CCChhHHHHHHHHHHHhCCCCcEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLF 236 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~l~~l~~~~~~~~i~ 236 (405)
++.|+||++||++++ ...| ...+..+.+ ||+|+++|+||+|.|....+..++ ..+.+|+.++++++ ...+++
T Consensus 11 ~~~~~iv~lhG~~~~-~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~ 83 (257)
T TIGR03611 11 ADAPVVVLSSGLGGS-GSYW-APQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIERFH 83 (257)
T ss_pred CCCCEEEEEcCCCcc-hhHH-HHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCcEE
Confidence 467899999999764 3434 666666654 799999999999999765433332 23345555555544 335799
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
++||||||.+++.++.++++ .++++|++++...
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~ 116 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPE--RLLSLVLINAWSR 116 (257)
T ss_pred EEEechhHHHHHHHHHHChH--HhHHheeecCCCC
Confidence 99999999999999999887 7999999987443
No 21
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.80 E-value=2.5e-18 Score=166.89 Aligned_cols=103 Identities=19% Similarity=0.300 Sum_probs=77.6
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCccc-CCChhHHHHHHHHHHHhCCCCcEEE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFA 237 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~l~~l~~~~~~~~i~l 237 (405)
..|+||++||++++ ...| +.++..+.+ +|+|+++|+||||.|+.+....++ ..+.+|+.++++.+ ...++++
T Consensus 87 ~gp~lvllHG~~~~-~~~w-~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~l 159 (360)
T PLN02679 87 SGPPVLLVHGFGAS-IPHW-RRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPTVL 159 (360)
T ss_pred CCCeEEEECCCCCC-HHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCeEE
Confidence 45789999999754 4444 777887766 799999999999999765332232 24455666666544 3358999
Q ss_pred EEEcHHHHHHHHHHhh-cCCCCCceEEEEEcCCC
Q 015544 238 IGTSIGANILVKYLGE-EGEKTPVAGAAAICSPW 270 (405)
Q Consensus 238 vG~S~GG~ia~~yl~~-~~~~~~v~~~v~i~~~~ 270 (405)
+||||||.+++.++.. +|+ +|+++|+++++.
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~~~ 191 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRD--LVRGLVLLNCAG 191 (360)
T ss_pred EEECHHHHHHHHHHHhcChh--hcCEEEEECCcc
Confidence 9999999999988875 577 899999999754
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.80 E-value=4.4e-19 Score=161.47 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=76.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lv 238 (405)
.+|++|++||+++ +...| +.+++.+. +||+|+++|+||||.|+..........+.+|+.++++.+ ...+++++
T Consensus 12 ~~~~li~~hg~~~-~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSLGT-DLRMW-DPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL----GIERAVFC 84 (251)
T ss_pred CCCeEEEEcCccc-chhhH-HHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCceEEE
Confidence 5789999999854 44444 67777775 589999999999999865432221122334454444433 44589999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 239 G~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
||||||.+++.++.+.++ .++++|+++++..
T Consensus 85 G~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~ 115 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPD--RVRALVLSNTAAK 115 (251)
T ss_pred EeCchHHHHHHHHHHCHH--HhHHHhhccCccc
Confidence 999999999999999887 7999998887543
No 23
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.80 E-value=7.4e-19 Score=157.24 Aligned_cols=215 Identities=19% Similarity=0.240 Sum_probs=119.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCC-Cccc-CCChhHHHHHHHHHHHhCCCCcEEEEEE
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~-~~~~-~~~~~Dl~~~l~~l~~~~~~~~i~lvG~ 240 (405)
||++||+++++ ..| ..+++.++ +||+|+++|+||+|.|+.... ..+. ..+.+|+.++++. ....+++++||
T Consensus 1 vv~~hG~~~~~-~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~lvG~ 73 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESW-DPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDA----LGIKKVILVGH 73 (228)
T ss_dssp EEEE-STTTTG-GGG-HHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHH----TTTSSEEEEEE
T ss_pred eEEECCCCCCH-HHH-HHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccc----ccccccccccc
Confidence 68999997654 444 77888884 799999999999999986543 1111 1223344444433 33368999999
Q ss_pred cHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhH--HHHhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhc
Q 015544 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGD--RFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKK 318 (405)
Q Consensus 241 S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 318 (405)
|+||.+++.++.++|+ +++++|+++++....... ... ......+...... .................+......
T Consensus 74 S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 149 (228)
T PF12697_consen 74 SMGGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSFG-PSFIRRLLAWRSR-SLRRLASRFFYRWFDGDEPEDLIR 149 (228)
T ss_dssp THHHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccccccccccccc--ccccceeeccccccccccccccc-chhhhhhhhcccc-cccccccccccccccccccccccc
Confidence 9999999999999988 899999999988764332 111 1111111111000 000000000000000000000000
Q ss_pred CCCHHHHhhhcccccCCCCCHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcCCcEEEEeeccCcccc
Q 015544 319 SRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSNCSIHAIVSIFTSFYV 398 (405)
Q Consensus 319 ~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~t~~~~~~~ 398 (405)
. ....+.+.+... +........++++++|+++++|++|++++.+.. .......+++.+.+....+|..
T Consensus 150 ~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~ 217 (228)
T PF12697_consen 150 S-SRRALAEYLRSN----------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESA-EELADKLPNAELVVIPGAGHFL 217 (228)
T ss_dssp H-HHHHHHHHHHHH----------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHH-HHHHHHSTTEEEEEETTSSSTH
T ss_pred c-cccccccccccc----------cccccccccccccCCCeEEeecCCCCCCCHHHH-HHHHHHCCCCEEEEECCCCCcc
Confidence 0 000000000000 011122355678899999999999999985432 2234457888888776666654
Q ss_pred cc
Q 015544 399 PF 400 (405)
Q Consensus 399 ~~ 400 (405)
.+
T Consensus 218 ~~ 219 (228)
T PF12697_consen 218 FL 219 (228)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 24
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.79 E-value=6.7e-19 Score=162.26 Aligned_cols=220 Identities=13% Similarity=0.081 Sum_probs=126.3
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEE
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~ 236 (405)
..++|+||++||+.+++ ..| ..++..+.+ +|+|+++|+||||.|..... .....+.+|+.++++.+ ...+++
T Consensus 13 ~~~~~~iv~lhG~~~~~-~~~-~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l----~~~~~~ 84 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSL-DNL-GVLARDLVN-DHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDAL----QIEKAT 84 (255)
T ss_pred CCCCCCEEEECCCCCch-hHH-HHHHHHHhh-CCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHc----CCCceE
Confidence 35678899999997654 344 677777765 69999999999999875432 22234556777777665 334799
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC-CChhhhHHHHhhhhHHHHHHHHHHHhH---HHHHHhhcccccccCC
Q 015544 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSP-WDLLIGDRFIGRRLIQKIYDRALTIGL---QDYAQLHEPRYSRLAN 312 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~ 312 (405)
++||||||.+++.++..+++ +|+++|+++++ ....... . ...... ......... +.........+ .
T Consensus 85 lvGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~ 154 (255)
T PRK10673 85 FIGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVRR-H--DEIFAA-INAVSEAGATTRQQAAAIMRQHL----N 154 (255)
T ss_pred EEEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccchh-h--HHHHHH-HHHhhhcccccHHHHHHHHHHhc----C
Confidence 99999999999999999888 89999999753 2221000 0 000000 000000000 00000000000 0
Q ss_pred HHHHhcCCCHHHHhh-hccccc--CCCCCHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcCCcEEEE
Q 015544 313 WEGIKKSRSIRDFDS-HATCLV--GKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSNCSIHAI 389 (405)
Q Consensus 313 ~~~~~~~~~~~~fd~-~~~~~~--~g~~~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~ 389 (405)
......+.. .+.... .+.....+.+........++++++|+|+|+|++|++++.+... ...+..|++.+.
T Consensus 155 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~-~~~~~~~~~~~~ 227 (255)
T PRK10673 155 ------EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRD-DLLAQFPQARAH 227 (255)
T ss_pred ------CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHH-HHHHhCCCcEEE
Confidence 000000000 000000 0000111223333334567789999999999999999876433 346667888888
Q ss_pred eeccCccccccc
Q 015544 390 VSIFTSFYVPFD 401 (405)
Q Consensus 390 ~t~~~~~~~~~~ 401 (405)
+....+|+.++|
T Consensus 228 ~~~~~gH~~~~~ 239 (255)
T PRK10673 228 VIAGAGHWVHAE 239 (255)
T ss_pred EeCCCCCeeecc
Confidence 887777776554
No 25
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.79 E-value=7.4e-19 Score=162.41 Aligned_cols=219 Identities=11% Similarity=0.060 Sum_probs=120.5
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
.|+||++||++++ ...| +.++..|.+ .|+|+++|+||||.|+... .+ ..+|+.+ .+.+. ...++.++|
T Consensus 13 ~~~ivllHG~~~~-~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~---~~~~~~~---~l~~~-~~~~~~lvG 80 (256)
T PRK10349 13 NVHLVLLHGWGLN-AEVW-RCIDEELSS-HFTLHLVDLPGFGRSRGFG--AL---SLADMAE---AVLQQ-APDKAIWLG 80 (256)
T ss_pred CCeEEEECCCCCC-hhHH-HHHHHHHhc-CCEEEEecCCCCCCCCCCC--CC---CHHHHHH---HHHhc-CCCCeEEEE
Confidence 3569999998654 4444 778888876 4999999999999997432 12 1233333 23222 345899999
Q ss_pred EcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHH--HHhhhhHHHHHHHH---HHHhHHHHHHhhcccccccCCHH
Q 015544 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDR--FIGRRLIQKIYDRA---LTIGLQDYAQLHEPRYSRLANWE 314 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~ 314 (405)
|||||.+++.++.++|+ +++++|+++++........ .........+.... ....++.+..... ........
T Consensus 81 hS~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 156 (256)
T PRK10349 81 WSLGGLVASQIALTHPE--RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT--MGTETARQ 156 (256)
T ss_pred ECHHHHHHHHHHHhChH--hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH--ccCchHHH
Confidence 99999999999999888 8999999987432211000 00000001111110 0011111111000 00000000
Q ss_pred HHhcCCCHHHHhhhccc-ccCCCC---CHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcCCcEEEEe
Q 015544 315 GIKKSRSIRDFDSHATC-LVGKFE---TVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSNCSIHAIV 390 (405)
Q Consensus 315 ~~~~~~~~~~fd~~~~~-~~~g~~---~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~ 390 (405)
. ..++...... ...... ...+.+...+....+++|++|+|+|+|++|+++|.+.. ....+..++..+++
T Consensus 157 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~-~~~~~~i~~~~~~~ 229 (256)
T PRK10349 157 D------ARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVV-PMLDKLWPHSESYI 229 (256)
T ss_pred H------HHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHH-HHHHHhCCCCeEEE
Confidence 0 0011110000 000000 01122233344467889999999999999999987643 33455568888888
Q ss_pred eccCccccccc
Q 015544 391 SIFTSFYVPFD 401 (405)
Q Consensus 391 t~~~~~~~~~~ 401 (405)
...++|+...|
T Consensus 230 i~~~gH~~~~e 240 (256)
T PRK10349 230 FAKAAHAPFIS 240 (256)
T ss_pred eCCCCCCcccc
Confidence 87777766554
No 26
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.79 E-value=4.3e-18 Score=158.55 Aligned_cols=104 Identities=19% Similarity=0.221 Sum_probs=77.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCccc-CCChhHHHHHHHHHHHhCCCCcEEE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFA 237 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~l~~l~~~~~~~~i~l 237 (405)
+.|+||++||+.++ ...| +.++..+.+ +|+|+++|+||+|.|..+....++ ..+.+|+.++++ +....++++
T Consensus 27 ~~~~vv~~hG~~~~-~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~----~~~~~~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGAS-THSW-RDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCA----AEGLSPDGV 99 (278)
T ss_pred CCCeEEEEcCCCCC-HHHH-HHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHH----HcCCCCceE
Confidence 45889999998654 4445 677877765 699999999999998765432222 223344444443 334457999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 238 vG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
+||||||.+++.++..+++ +++++|++++...
T Consensus 100 vG~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~ 131 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPV--TPRMVVGINAALM 131 (278)
T ss_pred EEECccHHHHHHHHHhCCc--ccceEEEEcCccc
Confidence 9999999999999999887 7999999987654
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.79 E-value=1.8e-17 Score=154.29 Aligned_cols=107 Identities=14% Similarity=0.184 Sum_probs=78.1
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCC--cccCCChhHHHHHHHHHHHhCCCCcEE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC--FYNAGWTEDAREVIGYLHHEYPKAPLF 236 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~--~~~~~~~~Dl~~~l~~l~~~~~~~~i~ 236 (405)
..|+||++||+.|++.. ++..+...+.+.||+|+++|+||+|.|...... .++ .+++.+.+..+.+.....+++
T Consensus 24 ~~~~vl~~hG~~g~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 99 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHE-YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWT---IDYFVDELEEVREKLGLDKFY 99 (288)
T ss_pred CCCeEEEEcCCCCccHH-HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCccccccc---HHHHHHHHHHHHHHcCCCcEE
Confidence 35789999998775544 446677777767999999999999998754221 122 234444444444444455799
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
++||||||.+++.++..+++ +++++|++++...
T Consensus 100 liG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 132 (288)
T TIGR01250 100 LLGHSWGGMLAQEYALKYGQ--HLKGLIISSMLDS 132 (288)
T ss_pred EEEeehHHHHHHHHHHhCcc--ccceeeEeccccc
Confidence 99999999999999999988 7999998876543
No 28
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.78 E-value=3.7e-18 Score=169.01 Aligned_cols=107 Identities=18% Similarity=0.288 Sum_probs=77.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHh---hCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHH-HHHHHhCCCCc
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTA---KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVI-GYLHHEYPKAP 234 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~---~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l-~~l~~~~~~~~ 234 (405)
.+|+||++||+.++. ..|-..+...+. ++||+|+++|+||||.|+.+.+..|. .++..+.+ ..+.+..+..+
T Consensus 200 ~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~yt---l~~~a~~l~~~ll~~lg~~k 275 (481)
T PLN03087 200 AKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYT---LREHLEMIERSVLERYKVKS 275 (481)
T ss_pred CCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCC---HHHHHHHHHHHHHHHcCCCC
Confidence 457899999997643 444223434444 46999999999999999765433333 23333333 23444555678
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 235 i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
++++||||||.+++.++.++|+ +++++|+++++..
T Consensus 276 ~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~~~~ 310 (481)
T PLN03087 276 FHIVAHSLGCILALALAVKHPG--AVKSLTLLAPPYY 310 (481)
T ss_pred EEEEEECHHHHHHHHHHHhChH--hccEEEEECCCcc
Confidence 9999999999999999999998 8999999998654
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.78 E-value=8.2e-19 Score=159.25 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=73.1
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
.|+||++||+++ +...| +.++..+.+ +|+|+++|+||+|.|+.... .++.++++.+.... ..+++++|
T Consensus 4 ~~~iv~~HG~~~-~~~~~-~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~-~~~~~lvG 71 (245)
T TIGR01738 4 NVHLVLIHGWGM-NAEVF-RCLDEELSA-HFTLHLVDLPGHGRSRGFGP--------LSLADAAEAIAAQA-PDPAIWLG 71 (245)
T ss_pred CceEEEEcCCCC-chhhH-HHHHHhhcc-CeEEEEecCCcCccCCCCCC--------cCHHHHHHHHHHhC-CCCeEEEE
Confidence 467999999865 44445 778888865 69999999999999864321 12333444444333 35899999
Q ss_pred EcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
|||||.+++.++.++|+ +++++|++++..
T Consensus 72 ~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~ 100 (245)
T TIGR01738 72 WSLGGLVALHIAATHPD--RVRALVTVASSP 100 (245)
T ss_pred EcHHHHHHHHHHHHCHH--hhheeeEecCCc
Confidence 99999999999999988 799999987643
No 30
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.78 E-value=1.7e-17 Score=156.00 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=79.0
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
.|+||++||+.. +...| +.++..+.+ +|+|+++|+||+|.|+.+....+ ..+|..+.+..+.++....+++++|
T Consensus 34 ~~~iv~lHG~~~-~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lvG 107 (286)
T PRK03204 34 GPPILLCHGNPT-WSFLY-RDIIVALRD-RFRCVAPDYLGFGLSERPSGFGY---QIDEHARVIGEFVDHLGLDRYLSMG 107 (286)
T ss_pred CCEEEEECCCCc-cHHHH-HHHHHHHhC-CcEEEEECCCCCCCCCCCCcccc---CHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 478999999864 33334 677777765 69999999999999976533222 2356666666666666667899999
Q ss_pred EcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
|||||.+++.++..+++ +++++|+++++.
T Consensus 108 ~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~ 136 (286)
T PRK03204 108 QDWGGPISMAVAVERAD--RVRGVVLGNTWF 136 (286)
T ss_pred ECccHHHHHHHHHhChh--heeEEEEECccc
Confidence 99999999999999988 899999887653
No 31
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.78 E-value=2.2e-18 Score=157.82 Aligned_cols=235 Identities=19% Similarity=0.184 Sum_probs=139.9
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCC-CcccC-CChhHHHHHHHHHHHhCCCCc
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD-CFYNA-GWTEDAREVIGYLHHEYPKAP 234 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~-~~~~~-~~~~Dl~~~l~~l~~~~~~~~ 234 (405)
.++.|+|+++||+.-. ...| +.....++.+||+|+++|+||+|.|+.+.. ..|+. ....|+..+++++. .++
T Consensus 41 ~~~gP~illlHGfPe~-wysw-r~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~k 114 (322)
T KOG4178|consen 41 PGDGPIVLLLHGFPES-WYSW-RHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LKK 114 (322)
T ss_pred CCCCCEEEEEccCCcc-chhh-hhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----cce
Confidence 4678999999999753 3334 788999999999999999999999987655 33432 33468888888776 468
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh---hhhHHHHh---hhh----------HHHHHHHHHHHhHHH
Q 015544 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL---LIGDRFIG---RRL----------IQKIYDRALTIGLQD 298 (405)
Q Consensus 235 i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~---~~~~~~~~---~~~----------~~~~~~~~~~~~l~~ 298 (405)
++++||++||++++.++..+|+ ++++.|+++.++.. ........ +.+ ....+.+.....+..
T Consensus 115 ~~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~ 192 (322)
T KOG4178|consen 115 AFLVGHDWGAIVAWRLALFYPE--RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVK 192 (322)
T ss_pred eEEEeccchhHHHHHHHHhChh--hcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHH
Confidence 9999999999999999999999 89999999987761 11100000 000 001111111111111
Q ss_pred HHHhh-cc---cccc--cCCHHHHhcCCCHHHHhhhcccccCCCCCHHHHHHhCC-----CccccCcccCcEEEEeeCCC
Q 015544 299 YAQLH-EP---RYSR--LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCS-----SSTYVGNVSIPLLCISSLDD 367 (405)
Q Consensus 299 ~~~~~-~~---~~~~--~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s-----~~~~l~~I~vP~Lii~g~dD 367 (405)
.+... .. .... ......+ ....++-++..+ ...|+...-+||+... ....+.+|++|+++|+|+.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~w~-t~edi~~~~~~f--~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D 269 (322)
T KOG4178|consen 193 TFRTRKTPGPLIVPKQPNENPLWL-TEEDIAFYVSKF--QIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLD 269 (322)
T ss_pred hhhccccCCccccCCCCCCccchh-hHHHHHHHHhcc--ccccccccchhhHHHhhCchhccccccccccceEEEEecCc
Confidence 11100 00 0000 0000000 001111122222 2223444455555532 24567899999999999999
Q ss_pred CcCCCCCCChHHHhcCCcE-EEEeeccCccccccce
Q 015544 368 PVCTVEAIPWDECRSNCSI-HAIVSIFTSFYVPFDI 402 (405)
Q Consensus 368 ~ivp~~~~~~~~~~~~~~~-~l~~t~~~~~~~~~~~ 402 (405)
++.+....-....+.-|+. ..++..+.+|+++.|.
T Consensus 270 ~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~ 305 (322)
T KOG4178|consen 270 PVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEK 305 (322)
T ss_pred ccccchhHHHHHHHhhccccceEEecCCcccccccC
Confidence 9998762111122234444 5667788888887764
No 32
>PLN02578 hydrolase
Probab=99.78 E-value=3.3e-18 Score=165.74 Aligned_cols=102 Identities=21% Similarity=0.225 Sum_probs=77.2
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
.|.||++||++++ ...| +.++..+.+ +|+|+++|+||||.|+..........+.+|+.++++.+. ..+++++|
T Consensus 86 g~~vvliHG~~~~-~~~w-~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~----~~~~~lvG 158 (354)
T PLN02578 86 GLPIVLIHGFGAS-AFHW-RYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV----KEPAVLVG 158 (354)
T ss_pred CCeEEEECCCCCC-HHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc----cCCeEEEE
Confidence 3568899998654 4444 667777765 699999999999999765332222234456666666554 35899999
Q ss_pred EcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
||+||.+++.++.++|+ +++++|+++++.
T Consensus 159 ~S~Gg~ia~~~A~~~p~--~v~~lvLv~~~~ 187 (354)
T PLN02578 159 NSLGGFTALSTAVGYPE--LVAGVALLNSAG 187 (354)
T ss_pred ECHHHHHHHHHHHhChH--hcceEEEECCCc
Confidence 99999999999999998 899999998753
No 33
>PRK06489 hypothetical protein; Provisional
Probab=99.78 E-value=4.4e-18 Score=165.25 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=73.9
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHH-------hhCCCeEEEEeCCCCCCCCCCCCCc---ccCCChhHHH-HHHHHHHH
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNT-------AKRGWNVVVSNHRGLGGVSITSDCF---YNAGWTEDAR-EVIGYLHH 228 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l-------~~~Gy~vv~~d~rG~G~s~~~~~~~---~~~~~~~Dl~-~~l~~l~~ 228 (405)
.|+||++||+++++..++...+.+.+ ..++|+|+++|+||||.|+...... +.....+|.. +++..+.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 57899999997754443212444443 2468999999999999997543221 0001124443 33343444
Q ss_pred hCCCCcEE-EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 229 EYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 229 ~~~~~~i~-lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
+.+..++. ++||||||++++.++.++|+ +|+++|++++.
T Consensus 149 ~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s~ 188 (360)
T PRK06489 149 GLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMASQ 188 (360)
T ss_pred hcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeeccC
Confidence 44545674 89999999999999999999 89999999874
No 34
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.78 E-value=4.5e-19 Score=152.48 Aligned_cols=204 Identities=14% Similarity=0.153 Sum_probs=126.2
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEE
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~ 240 (405)
..|+++||++|++.+ ++.+.+.|+++||.|.++++||||-.+-.--......|.+|+.+..+++.++. ...|.++|.
T Consensus 16 ~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~g-y~eI~v~Gl 92 (243)
T COG1647 16 RAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAG-YDEIAVVGL 92 (243)
T ss_pred EEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcC-CCeEEEEee
Confidence 569999999997666 79999999999999999999999976411111112368899999999998442 237999999
Q ss_pred cHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCC
Q 015544 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSR 320 (405)
Q Consensus 241 S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 320 (405)
||||.++++++..++ ++++|.+|+|.........++ .+... ..+++++.. .+
T Consensus 93 SmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie-----~~l~y--~~~~kk~e~---------k~-------- 144 (243)
T COG1647 93 SMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIE-----GLLEY--FRNAKKYEG---------KD-------- 144 (243)
T ss_pred cchhHHHHHHHhhCC----ccceeeecCCcccccchhhhH-----HHHHH--HHHhhhccC---------CC--------
Confidence 999999999888774 789999999987643222211 11110 022222111 11
Q ss_pred CHHHHhhhcccccC-CCCCHHHHHHh-CCCccccCcccCcEEEEeeCCCCcCCCCCCCh--HHHhcCCcEEEEeeccCcc
Q 015544 321 SIRDFDSHATCLVG-KFETVDTYYRN-CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW--DECRSNCSIHAIVSIFTSF 396 (405)
Q Consensus 321 ~~~~fd~~~~~~~~-g~~~~~~yy~~-~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~--~~~~~~~~~~l~~t~~~~~ 396 (405)
..++++.+..-.. -..+..+++.. ......+..|..|++++.|.+|+.+|.+.... +...++++ .+..-..+++
T Consensus 145 -~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~K-eL~~~e~SgH 222 (243)
T COG1647 145 -QEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDK-ELKWLEGSGH 222 (243)
T ss_pred -HHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcc-eeEEEccCCc
Confidence 1111111100000 00011111111 11245688999999999999999999985433 33334443 4444444444
Q ss_pred c
Q 015544 397 Y 397 (405)
Q Consensus 397 ~ 397 (405)
.
T Consensus 223 V 223 (243)
T COG1647 223 V 223 (243)
T ss_pred e
Confidence 3
No 35
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.78 E-value=1.4e-18 Score=157.90 Aligned_cols=107 Identities=19% Similarity=0.315 Sum_probs=80.8
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
+|+||++||++++ ...| +.++..|+ +||+|+++|+||+|.|+.+... ...++.+.+..++..+.+..+..+++++|
T Consensus 1 ~~~vv~~hG~~~~-~~~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGS-GADW-QALIELLG-PHFRCLAIDLPGHGSSQSPDEI-ERYDFEEAAQDILATLLDQLGIEPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCc-hhhH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCcc-ChhhHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 3789999999764 4445 78888888 7999999999999999754221 11122222333366666666677999999
Q ss_pred EcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
||+||.+++.++..+++ .+++++++++....
T Consensus 77 ~S~Gg~ia~~~a~~~~~--~v~~lil~~~~~~~ 107 (251)
T TIGR03695 77 YSMGGRIALYYALQYPE--RVQGLILESGSPGL 107 (251)
T ss_pred eccHHHHHHHHHHhCch--heeeeEEecCCCCc
Confidence 99999999999999988 79999999875543
No 36
>PLN02872 triacylglycerol lipase
Probab=99.77 E-value=2.2e-18 Score=167.58 Aligned_cols=158 Identities=21% Similarity=0.290 Sum_probs=112.3
Q ss_pred CcccHHhHhhhhhCCCCCCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHH--
Q 015544 100 SSPHIQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-- 177 (405)
Q Consensus 100 ~~~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y-- 177 (405)
+..-+||+...++++. ..+.+++.++++||..+.+.|..+.... .....+|+|+++||+.+++..+.
T Consensus 25 ~~~~~~t~~~~~i~~~-gy~~e~h~v~T~DGy~L~l~ri~~~~~~----------~~~~~~~~Vll~HGl~~ss~~w~~~ 93 (395)
T PLN02872 25 RRSPVESLCAQLIHPA-GYSCTEHTIQTKDGYLLALQRVSSRNPR----------LGSQRGPPVLLQHGLFMAGDAWFLN 93 (395)
T ss_pred cCCCchhhHHHHHHHc-CCCceEEEEECCCCcEEEEEEcCCCCCC----------CCCCCCCeEEEeCcccccccceeec
Confidence 3456899987777553 6777899999999999999998543210 11234688999999976554432
Q ss_pred --HHHHHHHHhhCCCeEEEEeCCCCCCCCC----C--CCCcccCCC----hhHHHHHHHHHHHhCCCCcEEEEEEcHHHH
Q 015544 178 --IRHLVFNTAKRGWNVVVSNHRGLGGVSI----T--SDCFYNAGW----TEDAREVIGYLHHEYPKAPLFAIGTSIGAN 245 (405)
Q Consensus 178 --~~~~~~~l~~~Gy~vv~~d~rG~G~s~~----~--~~~~~~~~~----~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ 245 (405)
.+.++..|+++||+|+++|.||++.+.. . .+.++...| ..|+.++++++.+..+ .++.++||||||.
T Consensus 94 ~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~ 172 (395)
T PLN02872 94 SPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTI 172 (395)
T ss_pred CcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHH
Confidence 1456777889999999999999876532 1 122222222 2699999999976543 6899999999999
Q ss_pred HHHHHHhhcCC-CCCceEEEEEcCCC
Q 015544 246 ILVKYLGEEGE-KTPVAGAAAICSPW 270 (405)
Q Consensus 246 ia~~yl~~~~~-~~~v~~~v~i~~~~ 270 (405)
+++.++ .+++ +..++++++++|..
T Consensus 173 ~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 173 MSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred HHHHHh-hChHHHHHHHHHHHhcchh
Confidence 998655 4443 22588888888754
No 37
>PLN02965 Probable pheophorbidase
Probab=99.76 E-value=2.8e-18 Score=158.56 Aligned_cols=101 Identities=14% Similarity=0.175 Sum_probs=77.4
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCccc-CCChhHHHHHHHHHHHhCCCCcEEEEEE
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~l~~l~~~~~~~~i~lvG~ 240 (405)
.||++||++++ ...| +.++..|.+.||+|+++|+||||.|+......++ ....+|+.++++.+.. ..+++++||
T Consensus 5 ~vvllHG~~~~-~~~w-~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASHG-AWCW-YKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP---DHKVILVGH 79 (255)
T ss_pred EEEEECCCCCC-cCcH-HHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC---CCCEEEEec
Confidence 38899999754 4444 7888989888999999999999999754332222 2334566666655421 248999999
Q ss_pred cHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 241 SIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 241 S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
||||.+++.++.++|+ +|+++|++++.
T Consensus 80 SmGG~ia~~~a~~~p~--~v~~lvl~~~~ 106 (255)
T PLN02965 80 SIGGGSVTEALCKFTD--KISMAIYVAAA 106 (255)
T ss_pred CcchHHHHHHHHhCch--heeEEEEEccc
Confidence 9999999999999988 89999999875
No 38
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.76 E-value=4.8e-18 Score=155.38 Aligned_cols=102 Identities=16% Similarity=0.163 Sum_probs=74.8
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
.|+||++||+++++ ..| +.+.+.+ + +|+|+++|+||+|.|....... ...+.+|+.++++. ....+++++|
T Consensus 2 ~p~vvllHG~~~~~-~~w-~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~~-~~~~~~~l~~~l~~----~~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDW-QPVGEAL-P-DYPRLYIDLPGHGGSAAISVDG-FADVSRLLSQTLQS----YNILPYWLVG 72 (242)
T ss_pred CCEEEEECCCCCCh-HHH-HHHHHHc-C-CCCEEEecCCCCCCCCCccccC-HHHHHHHHHHHHHH----cCCCCeEEEE
Confidence 47799999997644 455 7788877 3 6999999999999997543221 11223444444443 3456899999
Q ss_pred EcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
|||||.+++.++.++++. +++++++++++..
T Consensus 73 ~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~~~ 103 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAG-GLCGLIVEGGNPG 103 (242)
T ss_pred ECHHHHHHHHHHHhCCcc-cccEEEEeCCCCC
Confidence 999999999999998652 4999999887653
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.76 E-value=5.6e-17 Score=154.01 Aligned_cols=126 Identities=14% Similarity=0.088 Sum_probs=89.2
Q ss_pred ceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCC
Q 015544 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (405)
Q Consensus 121 ~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~ 200 (405)
....+...||..+.+.-. + .++.++||++||+.+++.. ......+..++|+|+++|+|||
T Consensus 5 ~~~~~~~~~~~~l~y~~~---g--------------~~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~ 64 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQS---G--------------NPDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGC 64 (306)
T ss_pred cCCeEEcCCCcEEEEEEC---c--------------CCCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCC
Confidence 446778888887775321 1 1234568999998765443 2233445456899999999999
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 201 G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
|.|+..... + ....+|+.+.+..+.+..+..+++++||||||.+++.++..+++ +++++|++++..
T Consensus 65 G~S~~~~~~-~-~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~ 130 (306)
T TIGR01249 65 GKSTPHACL-E-ENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGIFL 130 (306)
T ss_pred CCCCCCCCc-c-cCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeecccc
Confidence 999754321 1 12335666666666665566689999999999999999999988 799999998754
No 40
>PRK07581 hypothetical protein; Validated
Probab=99.74 E-value=5.3e-17 Score=156.46 Aligned_cols=109 Identities=17% Similarity=0.154 Sum_probs=77.6
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHH---HHHhhCCCeEEEEeCCCCCCCCCCCC--CcccC------CChhHHHHHHHHHH
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLV---FNTAKRGWNVVVSNHRGLGGVSITSD--CFYNA------GWTEDAREVIGYLH 227 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~---~~l~~~Gy~vv~~d~rG~G~s~~~~~--~~~~~------~~~~Dl~~~l~~l~ 227 (405)
..|+||++||+++++.. + ..++ ..+...+|+|+++|+||||.|..+.. ..++. ...+|+.+....+.
T Consensus 40 ~~~~vll~~~~~~~~~~-~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD-N-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCccc-c-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 45778788887654333 2 2232 35656689999999999999875432 12221 13477777555565
Q ss_pred HhCCCCc-EEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 228 HEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 228 ~~~~~~~-i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
+.....+ .++|||||||++++.++.++|+ +|+++|++++...
T Consensus 118 ~~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~~~~~ 160 (339)
T PRK07581 118 EKFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIAGTAK 160 (339)
T ss_pred HHhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeeecCCC
Confidence 5556668 4799999999999999999999 8999999987543
No 41
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.73 E-value=3e-16 Score=144.36 Aligned_cols=155 Identities=18% Similarity=0.225 Sum_probs=105.5
Q ss_pred ccCCCCCCccc--HHhHhhhhhCCCCCCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCC
Q 015544 93 YLVTPWLSSPH--IQTAFLHFFGRPPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT 170 (405)
Q Consensus 93 y~p~~w~~~~~--~qt~~~~~~~~~~~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~ 170 (405)
+.|+.|+...+ ++++-...+. .-.++|..+.+.++++..+- ...-. ....++..+|++||++
T Consensus 37 ~~~~~w~~~~~~~l~~~e~ril~-~~~v~~~~~~v~i~~~~~iw---~~~~~------------~~~~~~~plVliHGyG 100 (365)
T KOG4409|consen 37 WLPTLWCSTSRDQLKEAEKRILS-SVPVPYSKKYVRIPNGIEIW---TITVS------------NESANKTPLVLIHGYG 100 (365)
T ss_pred cCCcccccchHHHHHHHHHhhhh-hcCCCcceeeeecCCCceeE---EEeec------------ccccCCCcEEEEeccc
Confidence 44555776544 5555433332 33578888888888655432 21111 0124555677999996
Q ss_pred CCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHH
Q 015544 171 SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 250 (405)
Q Consensus 171 g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~y 250 (405)
++ ...|.+.+ +.|++ .++|+++|++|.|.|+.+.-..-.......+.+-++..+....-.++.++|||+||.++..|
T Consensus 101 Ag-~g~f~~Nf-~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~Y 177 (365)
T KOG4409|consen 101 AG-LGLFFRNF-DDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKY 177 (365)
T ss_pred hh-HHHHHHhh-hhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHH
Confidence 64 44454544 44554 78999999999999986532222222234566667777777777899999999999999999
Q ss_pred HhhcCCCCCceEEEEEcC
Q 015544 251 LGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 251 l~~~~~~~~v~~~v~i~~ 268 (405)
|.++|+ +|+.+|+++|
T Consensus 178 AlKyPe--rV~kLiLvsP 193 (365)
T KOG4409|consen 178 ALKYPE--RVEKLILVSP 193 (365)
T ss_pred HHhChH--hhceEEEecc
Confidence 999999 8999999987
No 42
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.72 E-value=4.9e-16 Score=145.10 Aligned_cols=124 Identities=17% Similarity=0.135 Sum_probs=89.6
Q ss_pred CCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCc--cHHHHHHHHHHhhCCCeEEEEeCCCCCCCCC
Q 015544 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205 (405)
Q Consensus 128 ~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~--~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~ 205 (405)
.+|.++...+..|.. ...+.||++||.++... ......+++.++++||+|+++|+||||.|+.
T Consensus 9 ~~~~~l~g~~~~p~~---------------~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~ 73 (274)
T TIGR03100 9 CEGETLVGVLHIPGA---------------SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEG 73 (274)
T ss_pred cCCcEEEEEEEcCCC---------------CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCC
Confidence 456677666665532 23456777777543221 1123567899999999999999999999874
Q ss_pred CCCCcccCCChhHHHHHHHHHHHhCC-CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 206 TSDCFYNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 206 ~~~~~~~~~~~~Dl~~~l~~l~~~~~-~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
... ....+.+|+.+++++++++.+ ..+++++||||||.+++.++... . +++++|++++++.
T Consensus 74 ~~~--~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~--~v~~lil~~p~~~ 135 (274)
T TIGR03100 74 ENL--GFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-L--RVAGLVLLNPWVR 135 (274)
T ss_pred CCC--CHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-C--CccEEEEECCccC
Confidence 321 112456899999999988764 35799999999999999887543 3 6999999998754
No 43
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.72 E-value=4.3e-16 Score=151.25 Aligned_cols=105 Identities=17% Similarity=0.262 Sum_probs=81.0
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCC---ccc-CCChhHHHHHHHHHHHhCCCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC---FYN-AGWTEDAREVIGYLHHEYPKA 233 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~---~~~-~~~~~Dl~~~l~~l~~~~~~~ 233 (405)
...|+||++||+.++ ...| +.++..|.+ +|+|+++|+||||.|+..... .++ ..+++|+.++++.+. ..
T Consensus 125 ~~~~~ivllHG~~~~-~~~w-~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~~ 197 (383)
T PLN03084 125 NNNPPVLLIHGFPSQ-AYSY-RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----SD 197 (383)
T ss_pred CCCCeEEEECCCCCC-HHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----CC
Confidence 346889999999653 4445 778888875 799999999999999765332 122 234566666666553 34
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 234 ~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
++.++|||+||.+++.++.++|+ +++++|+++++..
T Consensus 198 ~~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~~~ 233 (383)
T PLN03084 198 KVSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPPLT 233 (383)
T ss_pred CceEEEECHHHHHHHHHHHhChH--hhcEEEEECCCCc
Confidence 79999999999999999999998 8999999998754
No 44
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.71 E-value=1.3e-15 Score=149.78 Aligned_cols=107 Identities=17% Similarity=0.174 Sum_probs=74.1
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChh-HHHHHHHHHHHhCCCCcEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTE-DAREVIGYLHHEYPKAPLF 236 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~-Dl~~~l~~l~~~~~~~~i~ 236 (405)
..+|+||++||+++ +...| ...+..+.+ +|+|+++|+||+|.|+............. ++.+.+....+.....+++
T Consensus 103 ~~~p~vvllHG~~~-~~~~~-~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~ 179 (402)
T PLN02894 103 EDAPTLVMVHGYGA-SQGFF-FRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFI 179 (402)
T ss_pred CCCCEEEEECCCCc-chhHH-HHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeE
Confidence 45689999999865 34445 455677765 59999999999999875421111111111 2222222222333445899
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
++||||||.+++.++.++++ +++++|++++.
T Consensus 180 lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p~ 210 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPE--HVQHLILVGPA 210 (402)
T ss_pred EEEECHHHHHHHHHHHhCch--hhcEEEEECCc
Confidence 99999999999999999988 89999999874
No 45
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.70 E-value=1.3e-16 Score=151.55 Aligned_cols=137 Identities=20% Similarity=0.264 Sum_probs=98.3
Q ss_pred ceEEEEcCCCC-EEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhC-CCeEEEEeCC
Q 015544 121 RRQLFRLSDGG-MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHR 198 (405)
Q Consensus 121 ~r~~~~~~dg~-~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~-Gy~vv~~d~r 198 (405)
....++.+.|. ++..-|....... ..+++..+|.||++||+.+ +...| +..+..+.++ |++|+++|.+
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~--------~~~~~~~~~pvlllHGF~~-~~~~w-~~~~~~L~~~~~~~v~aiDl~ 95 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKY--------GSPGDKDKPPVLLLHGFGA-SSFSW-RRVVPLLSKAKGLRVLAIDLP 95 (326)
T ss_pred cceEEEcccCCceeEEEEeccceec--------cCCCCCCCCcEEEeccccC-CcccH-hhhccccccccceEEEEEecC
Confidence 44556666664 6777787554210 0012246788999999976 44445 7788877765 6999999999
Q ss_pred CCC-CCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEE---EEcCCCCh
Q 015544 199 GLG-GVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA---AICSPWDL 272 (405)
Q Consensus 199 G~G-~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v---~i~~~~~~ 272 (405)
|+| .|+.+....|+ ..+..+.+..+...+...++.++|||+||.++..+|+.+|+ .|++++ +++++...
T Consensus 96 G~g~~s~~~~~~~y~---~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~~~~~ 168 (326)
T KOG1454|consen 96 GHGYSSPLPRGPLYT---LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGPPVYS 168 (326)
T ss_pred CCCcCCCCCCCCcee---hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcc--cccceeeeccccccccc
Confidence 999 44444333343 36666777777777777789999999999999999999999 799999 67776554
No 46
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.70 E-value=2.6e-16 Score=146.86 Aligned_cols=106 Identities=14% Similarity=0.217 Sum_probs=78.6
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~l 237 (405)
.++|+||++||+.+++ ..| ..++..|.++||+|+++|+||||.|.......+ .+.++...+.+.+.......++++
T Consensus 16 ~~~p~vvliHG~~~~~-~~w-~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~--~~~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 16 RQPPHFVLIHGISGGS-WCW-YKIRCLMENSGYKVTCIDLKSAGIDQSDADSVT--TFDEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCCeEEEECCCCCCc-CcH-HHHHHHHHhCCCEEEEecccCCCCCCCCcccCC--CHHHHHHHHHHHHHhcCCCCCEEE
Confidence 4578899999987644 444 788888988899999999999998753322211 223334444444444323468999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 238 vG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
+||||||.++..++..+++ +++++|++++.
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~~ 121 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAAT 121 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEeccc
Confidence 9999999999999988887 79999999763
No 47
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.69 E-value=1.5e-16 Score=153.59 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=63.2
Q ss_pred HHHHHH---HHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 015544 178 IRHLVF---NTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 178 ~~~~~~---~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
+..++. .|...+|+|+++|+||+|.|... + .......+|+.++++.+.. ...++++||||||++++.++.++
T Consensus 85 w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-~-~~~~~~a~dl~~ll~~l~l---~~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 85 WEGLVGSGRALDPARFRLLAFDFIGADGSLDV-P-IDTADQADAIALLLDALGI---ARLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred chhccCCCCccCccccEEEEEeCCCCCCCCCC-C-CCHHHHHHHHHHHHHHcCC---CcceEEEEECHHHHHHHHHHHHC
Confidence 366665 45445799999999999987532 1 1112345666666665532 12357999999999999999999
Q ss_pred CCCCCceEEEEEcCCCC
Q 015544 255 GEKTPVAGAAAICSPWD 271 (405)
Q Consensus 255 ~~~~~v~~~v~i~~~~~ 271 (405)
|+ +|+++|++++...
T Consensus 160 P~--~V~~LvLi~s~~~ 174 (343)
T PRK08775 160 PA--RVRTLVVVSGAHR 174 (343)
T ss_pred hH--hhheEEEECcccc
Confidence 98 8999999998654
No 48
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.68 E-value=1.6e-15 Score=139.63 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=87.8
Q ss_pred CCcEEEEeCCCCCCCc--cHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEE
Q 015544 159 TTPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~--~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~ 236 (405)
.+|+||++||+.++.. ...+..+++.|+++||+|+++|+||||.|+..........+.+|+.++++++++. +..+++
T Consensus 24 ~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~ 102 (266)
T TIGR03101 24 PRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVT 102 (266)
T ss_pred CceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEE
Confidence 4689999999865322 2233667889999999999999999999865432221234678999999999876 456899
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
++||||||.+++.++.++++ .++++|+++|....
T Consensus 103 LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~g 136 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAA--KCNRLVLWQPVVSG 136 (266)
T ss_pred EEEECHHHHHHHHHHHhCcc--ccceEEEeccccch
Confidence 99999999999999999887 79999999886654
No 49
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.68 E-value=5e-16 Score=158.86 Aligned_cols=133 Identities=16% Similarity=0.183 Sum_probs=104.6
Q ss_pred EEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCc--cHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 125 FRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSA--ASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 125 ~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~--~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
+++.||..+..+++.|.+ ....|+||++||+..... ..+.......++++||.|+++|+||+|.
T Consensus 1 i~~~DG~~L~~~~~~P~~--------------~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~ 66 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG--------------GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGA 66 (550)
T ss_pred CcCCCCCEEEEEEEecCC--------------CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEecccccc
Confidence 357899999999887753 246799999999865432 1122335567888999999999999999
Q ss_pred CCCCCCCcccCCChhHHHHHHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhh
Q 015544 203 VSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 203 s~~~~~~~~~~~~~~Dl~~~l~~l~~~-~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~ 274 (405)
|+....... ....+|+.++++++.++ ..+.++.++|+|+||.+++.++.++++ .++++|..++..+...
T Consensus 67 S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 67 SEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWDLYR 136 (550)
T ss_pred CCCceEecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccchhH
Confidence 986533222 45678999999999876 345699999999999999999998877 7999999998887654
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=99.68 E-value=9.6e-16 Score=158.19 Aligned_cols=125 Identities=19% Similarity=0.253 Sum_probs=86.6
Q ss_pred eEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCC
Q 015544 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (405)
Q Consensus 122 r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G 201 (405)
++.+...||..+++.++. +++.|+||++||+.++ ...| ..+.+.| ..||+|+++|+||||
T Consensus 4 ~~~~~~~~g~~l~~~~~g-----------------~~~~~~ivllHG~~~~-~~~w-~~~~~~L-~~~~~Vi~~D~~G~G 63 (582)
T PRK05855 4 RRTVVSSDGVRLAVYEWG-----------------DPDRPTVVLVHGYPDN-HEVW-DGVAPLL-ADRFRVVAYDVRGAG 63 (582)
T ss_pred eEEEEeeCCEEEEEEEcC-----------------CCCCCeEEEEcCCCch-HHHH-HHHHHHh-hcceEEEEecCCCCC
Confidence 345566788888877642 1346889999999654 3334 7788888 568999999999999
Q ss_pred CCCCCCCC-ccc-CCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 202 GVSITSDC-FYN-AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 202 ~s~~~~~~-~~~-~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
.|....+. .++ ..+.+|+.++++.+. ...+++++||||||.+++.++.+......+..++.++.+
T Consensus 64 ~S~~~~~~~~~~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~ 130 (582)
T PRK05855 64 RSSAPKRTAAYTLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGP 130 (582)
T ss_pred CCCCCCcccccCHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCC
Confidence 99754332 222 345567777777653 234699999999999998888763322245555555554
No 51
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.68 E-value=3.3e-16 Score=151.61 Aligned_cols=112 Identities=18% Similarity=0.165 Sum_probs=76.9
Q ss_pred CCcEEEEeCCCCCCCccH---------HHHHHH---HHHhhCCCeEEEEeCCC--CCCCCCCC----CCccc----CCCh
Q 015544 159 TTPIAIVIPGLTSDSAAS---------YIRHLV---FNTAKRGWNVVVSNHRG--LGGVSITS----DCFYN----AGWT 216 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~---------y~~~~~---~~l~~~Gy~vv~~d~rG--~G~s~~~~----~~~~~----~~~~ 216 (405)
..|+||++||++++++.. |+..++ ..+..++|+|+++|+|| +|.|...+ ...+. ....
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 457899999998865431 335554 25656789999999999 45443211 11111 0123
Q ss_pred hHHHHHHHHHHHhCCCCc-EEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 217 EDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~-i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+|..+.+..+.++....+ ++++||||||++++.++.++|+ +++++|++++....
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATSARH 164 (351)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccCCcC
Confidence 455544444444555557 9999999999999999999998 89999999986543
No 52
>PRK10566 esterase; Provisional
Probab=99.68 E-value=1.3e-15 Score=140.03 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=76.7
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCC-cccC------CChhHHHHHHHHHHHhC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC-FYNA------GWTEDAREVIGYLHHEY 230 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~-~~~~------~~~~Dl~~~l~~l~~~~ 230 (405)
...|+||++||++++. ..| ..++..++++||+|+++|+||+|.+....+. .... ...+|+.++++++.++.
T Consensus 25 ~~~p~vv~~HG~~~~~-~~~-~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSSK-LVY-SYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCccc-chH-HHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4579999999987643 344 6789999999999999999999975321111 1100 12367788888887653
Q ss_pred --CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEc
Q 015544 231 --PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (405)
Q Consensus 231 --~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~ 267 (405)
..++++++|||+||.+++.++...++ +++++.+.
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~ 138 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLM 138 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCC---eeEEEEee
Confidence 35689999999999999988887765 66655543
No 53
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.67 E-value=3.1e-15 Score=128.00 Aligned_cols=129 Identities=16% Similarity=0.253 Sum_probs=101.4
Q ss_pred CCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHH-HhhCCCeEEEE
Q 015544 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFN-TAKRGWNVVVS 195 (405)
Q Consensus 117 ~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~-l~~~Gy~vv~~ 195 (405)
..+|+|..+.++|..++...|.. . ..++|+++++||-.|+-.. . -..+.- ....+.+|+.+
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~-~---------------E~S~pTlLyfh~NAGNmGh-r-~~i~~~fy~~l~mnv~iv 112 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLML-S---------------ESSRPTLLYFHANAGNMGH-R-LPIARVFYVNLKMNVLIV 112 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeec-c---------------cCCCceEEEEccCCCcccc-h-hhHHHHHHHHcCceEEEE
Confidence 47889999999999888876764 2 2489999999998876432 2 123333 34568999999
Q ss_pred eCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcC
Q 015544 196 NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 196 d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~ 268 (405)
++||+|.|++... ..|..-|.+++++|+..+. ..+++++.|-|+||.++...+++..+ ++.|+++-+.
T Consensus 113 sYRGYG~S~Gsps---E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~ivENT 182 (300)
T KOG4391|consen 113 SYRGYGKSEGSPS---EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIVENT 182 (300)
T ss_pred EeeccccCCCCcc---ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeeeech
Confidence 9999999986533 2356679999999998864 47799999999999999999998888 7888886654
No 54
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.66 E-value=4.3e-15 Score=144.77 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=78.3
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~l 237 (405)
++.|+||++||++++. ..| ..+...+.+ +|+|+++|+||||.|...... ...+|+.+.+..+.+..+..++++
T Consensus 129 ~~~~~vl~~HG~~~~~-~~~-~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 201 (371)
T PRK14875 129 GDGTPVVLIHGFGGDL-NNW-LFNHAALAA-GRPVIALDLPGHGASSKAVGA----GSLDELAAAVLAFLDALGIERAHL 201 (371)
T ss_pred CCCCeEEEECCCCCcc-chH-HHHHHHHhc-CCEEEEEcCCCCCCCCCCCCC----CCHHHHHHHHHHHHHhcCCccEEE
Confidence 3467899999997654 444 566777765 599999999999998543221 123555555555556666668999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 238 vG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
+|||+||.+++.++..+++ ++.++|+++++.
T Consensus 202 vG~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~~ 232 (371)
T PRK14875 202 VGHSMGGAVALRLAARAPQ--RVASLTLIAPAG 232 (371)
T ss_pred EeechHHHHHHHHHHhCch--heeEEEEECcCC
Confidence 9999999999999999887 799999998764
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.66 E-value=5.5e-16 Score=150.01 Aligned_cols=109 Identities=12% Similarity=0.113 Sum_probs=85.1
Q ss_pred CcEEEEeCCCCCCCccHH---HHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCCh-hHHHHHHHHHHHhCCCCcE
Q 015544 160 TPIAIVIPGLTSDSAASY---IRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAPL 235 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y---~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~-~Dl~~~l~~l~~~~~~~~i 235 (405)
+++||++||+...+.... .+.+++.|+++||+|+++|+||+|.++... ....+. +|+.+++++++++.+..++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~---~~~d~~~~~~~~~v~~l~~~~~~~~i 138 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL---TLDDYINGYIDKCVDYICRTSKLDQI 138 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC---CHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 344889999743211100 157999999999999999999998764221 111233 4688999999999888899
Q ss_pred EEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChh
Q 015544 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 236 ~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
+++||||||.+++.|++.+++ +++++|++++|.+..
T Consensus 139 ~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 139 SLLGICQGGTFSLCYAALYPD--KIKNLVTMVTPVDFE 174 (350)
T ss_pred cEEEECHHHHHHHHHHHhCch--heeeEEEeccccccC
Confidence 999999999999999999887 799999999998864
No 56
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.65 E-value=4.7e-16 Score=140.28 Aligned_cols=200 Identities=17% Similarity=0.168 Sum_probs=118.4
Q ss_pred CeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 190 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 190 y~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
|+|+++|+||+|.|+............+|+.+.++.++++.+..++.++||||||.+++.|+.++|+ +|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 7899999999999883101122223358999999999999988889999999999999999999999 89999999987
Q ss_pred C--ChhhhHHHHhh-----hhHHHHHHHHHHHhHHHHHHhhc--------ccccccC---CHHHHhcCCCHHHHhhhccc
Q 015544 270 W--DLLIGDRFIGR-----RLIQKIYDRALTIGLQDYAQLHE--------PRYSRLA---NWEGIKKSRSIRDFDSHATC 331 (405)
Q Consensus 270 ~--~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~fd~~~~~ 331 (405)
. ........... ......... .....+....... ....... ..............+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 155 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNF-LSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMF-- 155 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH--
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhcc-ccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhc--
Confidence 3 11111111111 000000000 0000000000000 0000000 000000000000001100
Q ss_pred ccCCCCCHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcCCcEEEEeeccCcccccc
Q 015544 332 LVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSNCSIHAIVSIFTSFYVPF 400 (405)
Q Consensus 332 ~~~g~~~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~t~~~~~~~~~ 400 (405)
.....++........+.+|++|+|+++|++|+++|.+.... ..+..|+..+.+....+|+...
T Consensus 156 -----~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 156 -----WNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFL 218 (230)
T ss_dssp -----HHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHH
T ss_pred -----cccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHh
Confidence 02345555555667788999999999999999999876544 5677888888888776666543
No 57
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.64 E-value=5.6e-15 Score=131.01 Aligned_cols=181 Identities=18% Similarity=0.159 Sum_probs=123.1
Q ss_pred EEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhh-CCCeEEEEeCCCCC
Q 015544 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLG 201 (405)
Q Consensus 123 ~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~-~Gy~vv~~d~rG~G 201 (405)
..+++.-|..+.--.+.++. ...++++++||-..+-... -.+...+.. -+++++.+|++|+|
T Consensus 38 ~~~~t~rgn~~~~~y~~~~~---------------~~~~~lly~hGNa~Dlgq~--~~~~~~l~~~ln~nv~~~DYSGyG 100 (258)
T KOG1552|consen 38 FKVKTSRGNEIVCMYVRPPE---------------AAHPTLLYSHGNAADLGQM--VELFKELSIFLNCNVVSYDYSGYG 100 (258)
T ss_pred EEeecCCCCEEEEEEEcCcc---------------ccceEEEEcCCcccchHHH--HHHHHHHhhcccceEEEEeccccc
Confidence 34455666666544554433 3568999999975443322 233334443 48999999999999
Q ss_pred CCCCCCCCcccCCChhHHHHHHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHHHHh
Q 015544 202 GVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG 280 (405)
Q Consensus 202 ~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~-~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~~~~ 280 (405)
.|.++.... +..+|+.++.+++++++ +.++++++|+|+|+..++.+|++.+ +.|+|+.+|-.+..+.
T Consensus 101 ~S~G~psE~---n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv----- 168 (258)
T KOG1552|consen 101 RSSGKPSER---NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRV----- 168 (258)
T ss_pred ccCCCcccc---cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchhhhhh-----
Confidence 998775443 45699999999999999 5889999999999999999998875 7899988765443100
Q ss_pred hhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccccCCCCCHHHHHHhCCCccccCcccCcEE
Q 015544 281 RRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLL 360 (405)
Q Consensus 281 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP~L 360 (405)
+++. . .++ .-||. ....+.++.|++|+|
T Consensus 169 ------~~~~-------------------------~--~~~-~~~d~------------------f~~i~kI~~i~~PVL 196 (258)
T KOG1552|consen 169 ------AFPD-------------------------T--KTT-YCFDA------------------FPNIEKISKITCPVL 196 (258)
T ss_pred ------hccC-------------------------c--ceE-Eeecc------------------ccccCcceeccCCEE
Confidence 0000 0 000 01111 111567899999999
Q ss_pred EEeeCCCCcCCCCC-CChHHHhcCC
Q 015544 361 CISSLDDPVCTVEA-IPWDECRSNC 384 (405)
Q Consensus 361 ii~g~dD~ivp~~~-~~~~~~~~~~ 384 (405)
++||.||.++|... .+..+..+++
T Consensus 197 iiHgtdDevv~~sHg~~Lye~~k~~ 221 (258)
T KOG1552|consen 197 IIHGTDDEVVDFSHGKALYERCKEK 221 (258)
T ss_pred EEecccCceecccccHHHHHhcccc
Confidence 99999999999873 3334444444
No 58
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.63 E-value=6e-15 Score=144.15 Aligned_cols=107 Identities=18% Similarity=0.219 Sum_probs=73.9
Q ss_pred CCcEEEEeCCCCCCCccH-----------HHHHHHH---HHhhCCCeEEEEeCCC-CCCCCCCCC------C-------c
Q 015544 159 TTPIAIVIPGLTSDSAAS-----------YIRHLVF---NTAKRGWNVVVSNHRG-LGGVSITSD------C-------F 210 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~-----------y~~~~~~---~l~~~Gy~vv~~d~rG-~G~s~~~~~------~-------~ 210 (405)
..|+||++||+++++... ++..++. .+...+|+|+++|+|| +|+|...+. . .
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 468899999998866531 2355542 4445689999999999 455532211 0 1
Q ss_pred cc-CCChhHHHHHHHHHHHhCCCCc-EEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 211 YN-AGWTEDAREVIGYLHHEYPKAP-LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 211 ~~-~~~~~Dl~~~l~~l~~~~~~~~-i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
++ ..+.+|+.++++.+ +..+ .+++||||||.+++.++.++|+ +++++|++++...
T Consensus 127 ~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCCcc
Confidence 11 13334555555444 4456 5899999999999999999998 8999999997654
No 59
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.62 E-value=2e-15 Score=138.65 Aligned_cols=225 Identities=14% Similarity=0.124 Sum_probs=137.1
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhh-CCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcE
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPL 235 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~-~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i 235 (405)
....|+++++||+.|+ ..+| +.+...|++ .|-+++.+|.|.||.|+......+. ..++|+..+++..+..+...++
T Consensus 49 ~~~~Pp~i~lHGl~GS-~~Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~-~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGS-KENW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYE-AMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred cCCCCceEEecccccC-CCCH-HHHHHHhcccccCceEEEecccCCCCccccccCHH-HHHHHHHHHHHHcccccccCCc
Confidence 3577889999999985 5666 899999886 4889999999999999887666544 4668999999988766666789
Q ss_pred EEEEEcHHH-HHHHHHHhhcCCCCCceEEEEEcCCC-ChhhhHHHHhhhhHHHHHHHHHH--------HhHHHHHHhhcc
Q 015544 236 FAIGTSIGA-NILVKYLGEEGEKTPVAGAAAICSPW-DLLIGDRFIGRRLIQKIYDRALT--------IGLQDYAQLHEP 305 (405)
Q Consensus 236 ~lvG~S~GG-~ia~~yl~~~~~~~~v~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~l~~~~~~~~~ 305 (405)
.++|||||| -+++.+....|+ .+..++++..+. -..... .. ...++..+.. .+.+...+....
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~sP~~~~~~~-~e----~~e~i~~m~~~d~~~~~~~~rke~~~~l~~ 198 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPD--LIERLIVEDISPGGVGRSY-GE----YRELIKAMIQLDLSIGVSRGRKEALKSLIE 198 (315)
T ss_pred eecccCcchHHHHHHHHHhcCc--ccceeEEEecCCccCCccc-ch----HHHHHHHHHhccccccccccHHHHHHHHHH
Confidence 999999999 556666666777 688888877432 111000 00 0011111000 000111100000
Q ss_pred cccccCCHHHHhcCCCHHHHhhhccc--cc-------CCCCCHHHHHHh---CCCcccc--CcccCcEEEEeeCCCCcCC
Q 015544 306 RYSRLANWEGIKKSRSIRDFDSHATC--LV-------GKFETVDTYYRN---CSSSTYV--GNVSIPLLCISSLDDPVCT 371 (405)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~fd~~~~~--~~-------~g~~~~~~yy~~---~s~~~~l--~~I~vP~Lii~g~dD~ivp 371 (405)
+.....+++|-..-.. +. ....++.+.+.. .+.-..+ ..-..|+|++.|.+++++|
T Consensus 199 ----------~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 199 ----------VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred ----------HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC
Confidence 0011111111111000 00 011122222222 2222222 5668999999999999999
Q ss_pred CCCCChHHHhcCCcEEEEeeccCccccccce
Q 015544 372 VEAIPWDECRSNCSIHAIVSIFTSFYVPFDI 402 (405)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~t~~~~~~~~~~~ 402 (405)
.+..+. ..+.-|++.+......+||+.+|-
T Consensus 269 ~~~~~~-~~~~fp~~e~~~ld~aGHwVh~E~ 298 (315)
T KOG2382|consen 269 DEHYPR-MEKIFPNVEVHELDEAGHWVHLEK 298 (315)
T ss_pred hhHHHH-HHHhccchheeecccCCceeecCC
Confidence 987665 445567788999998999998874
No 60
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.62 E-value=1.7e-14 Score=149.28 Aligned_cols=225 Identities=18% Similarity=0.102 Sum_probs=146.2
Q ss_pred CCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 117 ~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
..+.+...+...||.++....+.|.+.+ ...+-|+||++||..............+.++.+||.|+.+|
T Consensus 362 ~~~~e~~~~~~~dG~~i~~~l~~P~~~~-----------~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n 430 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHGWLYKPPGFD-----------PRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPN 430 (620)
T ss_pred cCCceEEEEEcCCCCEEEEEEecCCCCC-----------CCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeC
Confidence 3455677788889999997666665421 12235999999997533333233667888999999999999
Q ss_pred CCCCCCCCCC----CCCcccCCChhHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 197 HRGLGGVSIT----SDCFYNAGWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 197 ~rG~G~s~~~----~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
+||.++-... ...-+.....+|+.+.++++ +++| ..+++++|+|.||.+++..++..+. ++++++..++
T Consensus 431 ~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l-~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~---f~a~~~~~~~ 506 (620)
T COG1506 431 YRGSTGYGREFADAIRGDWGGVDLEDLIAAVDAL-VKLPLVDPERIGITGGSYGGYMTLLAATKTPR---FKAAVAVAGG 506 (620)
T ss_pred CCCCCccHHHHHHhhhhccCCccHHHHHHHHHHH-HhCCCcChHHeEEeccChHHHHHHHHHhcCch---hheEEeccCc
Confidence 9996653211 11123334568999999966 4444 3589999999999999998888775 8888877765
Q ss_pred CChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccccCCCCCHHHHHHhCCCc
Q 015544 270 WDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSS 349 (405)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~ 349 (405)
.+-...... . ... + ... .++... +.....++|...|+.
T Consensus 507 ~~~~~~~~~-----------~--~~~-----------~--~~~------------~~~~~~----~~~~~~~~~~~~sp~ 544 (620)
T COG1506 507 VDWLLYFGE-----------S--TEG-----------L--RFD------------PEENGG----GPPEDREKYEDRSPI 544 (620)
T ss_pred chhhhhccc-----------c--chh-----------h--cCC------------HHHhCC----CcccChHHHHhcChh
Confidence 543110000 0 000 0 000 000000 000035778889999
Q ss_pred cccCcccCcEEEEeeCCCCcCCCC-CCChH--HHhcCCcEEEEeeccCcccc
Q 015544 350 TYVGNVSIPLLCISSLDDPVCTVE-AIPWD--ECRSNCSIHAIVSIFTSFYV 398 (405)
Q Consensus 350 ~~l~~I~vP~Lii~g~dD~ivp~~-~~~~~--~~~~~~~~~l~~t~~~~~~~ 398 (405)
..+++|++|+|+|||++|..||.+ +.... ..+...++.+++-...+|..
T Consensus 545 ~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~ 596 (620)
T COG1506 545 FYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGF 596 (620)
T ss_pred hhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCC
Confidence 999999999999999999999987 32222 23346677777765555544
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.59 E-value=1.4e-14 Score=121.53 Aligned_cols=92 Identities=17% Similarity=0.307 Sum_probs=75.8
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHh-CCCCcEEEEEE
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGT 240 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~-~~~~~i~lvG~ 240 (405)
+||++||..++ ...| ..+++.++++||.|+++|+||+|.+. ..+++.++++.+.++ ....+++++||
T Consensus 1 ~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGS-RRDY-QPLAEALAEQGYAVVAFDYPGHGDSD----------GADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTT-THHH-HHHHHHHHHTTEEEEEESCTTSTTSH----------HSHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCC-HHHH-HHHHHHHHHCCCEEEEEecCCCCccc----------hhHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 58999999764 4445 79999999999999999999999762 124778888877443 35579999999
Q ss_pred cHHHHHHHHHHhhcCCCCCceEEEEEcC
Q 015544 241 SIGANILVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 241 S~GG~ia~~yl~~~~~~~~v~~~v~i~~ 268 (405)
|+||.+++.++.+. . +++++|++++
T Consensus 69 S~Gg~~a~~~~~~~-~--~v~~~v~~~~ 93 (145)
T PF12695_consen 69 SMGGAIAANLAARN-P--RVKAVVLLSP 93 (145)
T ss_dssp THHHHHHHHHHHHS-T--TESEEEEESE
T ss_pred ccCcHHHHHHhhhc-c--ceeEEEEecC
Confidence 99999999999988 4 6999999986
No 62
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.59 E-value=1.1e-14 Score=139.26 Aligned_cols=135 Identities=19% Similarity=0.178 Sum_probs=89.5
Q ss_pred CCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 118 ~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
...++..|..++ ++|......|+. +...|+||++.|+-+ -.+.+.+.+.++++++|+.++++|.
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~~--------------~~p~P~VIv~gGlDs-~qeD~~~l~~~~l~~rGiA~LtvDm 226 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPSG--------------EKPYPTVIVCGGLDS-LQEDLYRLFRDYLAPRGIAMLTVDM 226 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESSS--------------SS-EEEEEEE--TTS--GGGGHHHHHCCCHHCT-EEEEE--
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCCC--------------CCCCCEEEEeCCcch-hHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 445677777766 778766555542 457899999999865 4444446666778999999999999
Q ss_pred CCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChh
Q 015544 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 198 rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
||.|.|.... ...+...-..++++++...- ...+|.++|.|+||+++.+.|..+++ +++|+|+.+++.+-.
T Consensus 227 PG~G~s~~~~---l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 227 PGQGESPKWP---LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHF 299 (411)
T ss_dssp TTSGGGTTT----S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCG
T ss_pred CCCcccccCC---CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhh
Confidence 9999875321 11122233567888887642 25689999999999999999987776 799999999975543
No 63
>PRK11071 esterase YqiA; Provisional
Probab=99.57 E-value=4.3e-14 Score=124.48 Aligned_cols=92 Identities=17% Similarity=0.090 Sum_probs=69.7
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhh--CCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEE
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~--~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lv 238 (405)
|+||++||++++..++....+...+.+ .+|+|+++|+||+| +|..+.++.+.++.+..+++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 679999999876666543345566655 37999999999974 3455555555556666789999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 239 G~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
|+||||.+++.++.+++. .+|+++++.+.
T Consensus 67 G~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~ 95 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML-----PAVVVNPAVRP 95 (190)
T ss_pred EECHHHHHHHHHHHHcCC-----CEEEECCCCCH
Confidence 999999999999999874 25888887663
No 64
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.56 E-value=2.3e-13 Score=153.74 Aligned_cols=106 Identities=14% Similarity=0.176 Sum_probs=76.6
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCC-c---ccCCChhHHHHHHHHHHHhCCCCc
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC-F---YNAGWTEDAREVIGYLHHEYPKAP 234 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~-~---~~~~~~~Dl~~~l~~l~~~~~~~~ 234 (405)
..|+||++||+.+++. .| ..++..+.+ +|+|+++|+||||.|...... . ......+++.+.+..+.++....+
T Consensus 1370 ~~~~vVllHG~~~s~~-~w-~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~ 1446 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DW-IPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGK 1446 (1655)
T ss_pred CCCeEEEECCCCCCHH-HH-HHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999999977544 44 678887765 599999999999998654210 0 001123444444433333344568
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 235 i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
++++||||||.+++.++.++|+ +++++|++++.
T Consensus 1447 v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~~ 1479 (1655)
T PLN02980 1447 VTLVGYSMGARIALYMALRFSD--KIEGAVIISGS 1479 (1655)
T ss_pred EEEEEECHHHHHHHHHHHhChH--hhCEEEEECCC
Confidence 9999999999999999999998 89999999864
No 65
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.56 E-value=6.1e-14 Score=140.47 Aligned_cols=111 Identities=12% Similarity=0.161 Sum_probs=82.1
Q ss_pred CCcEEEEeCCCCCCCccHHH---HHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCCh-hHHHHHHHHHHHhCCCCc
Q 015544 159 TTPIAIVIPGLTSDSAASYI---RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYPKAP 234 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~---~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~-~Dl~~~l~~l~~~~~~~~ 234 (405)
.++.|||+||+.....-... ++++++|.++||+|+++|+||+|.+..... . .++. +++.++++.+++..+..+
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~--~-ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT--F-DDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC--h-hhhHHHHHHHHHHHHHHhcCCCC
Confidence 45668899998542221111 379999999999999999999997643211 1 1233 568899999988888889
Q ss_pred EEEEEEcHHHHHHHH----HHhhc-CCCCCceEEEEEcCCCChhh
Q 015544 235 LFAIGTSIGANILVK----YLGEE-GEKTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 235 i~lvG~S~GG~ia~~----yl~~~-~~~~~v~~~v~i~~~~~~~~ 274 (405)
+.++||||||.++.. +++.. ++ +++++++++++.|+..
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~--rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDK--RIKSATFFTTLLDFSD 306 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCC--ccceEEEEecCcCCCC
Confidence 999999999999632 34444 34 7999999999988754
No 66
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.54 E-value=2.7e-13 Score=121.71 Aligned_cols=110 Identities=15% Similarity=0.197 Sum_probs=81.6
Q ss_pred CCCcEEEEeCCCCCCCccHHH--HHHHHHHhhCCCeEEEEeCCCCCCCCCCCC------CcccCCChhHHHHHHHHHHHh
Q 015544 158 DTTPIAIVIPGLTSDSAASYI--RHLVFNTAKRGWNVVVSNHRGLGGVSITSD------CFYNAGWTEDAREVIGYLHHE 229 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~--~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~------~~~~~~~~~Dl~~~l~~l~~~ 229 (405)
...|+||++||.+++ ...+. ..+...+.+.||.|+++|+||++.+..... .....+...|+.++++++.++
T Consensus 11 ~~~P~vv~lHG~~~~-~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQT-ASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCC-HHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 468999999998654 33342 135555666899999999999875432110 011123467899999999888
Q ss_pred CC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 230 YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 230 ~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
++ .++++++|||+||.+++.++.++++ .+.+++.++++.
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCc
Confidence 75 3589999999999999999999988 788988888653
No 67
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.54 E-value=9.6e-14 Score=117.23 Aligned_cols=110 Identities=24% Similarity=0.325 Sum_probs=90.2
Q ss_pred CCCCcEEEEeCC---CCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCC
Q 015544 157 DDTTPIAIVIPG---LTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (405)
Q Consensus 157 ~~~~P~VvllHG---~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~ 233 (405)
.+.+|+.|++|- ..|+....-+..+++.|.++||.|+.+|+||-|+|.++-+. ..|..+|..++++|++.++|+.
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--GiGE~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN--GIGELEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--CcchHHHHHHHHHHHHhhCCCc
Confidence 367899999985 33555556667888899999999999999999999875432 3477899999999999999988
Q ss_pred cE-EEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 234 PL-FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 234 ~i-~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
+. .+.|+|+||.|++..+.+.++ ....+++.++.+
T Consensus 103 ~~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~ 138 (210)
T COG2945 103 ASCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPIN 138 (210)
T ss_pred hhhhhcccchHHHHHHHHHHhccc---ccceeeccCCCC
Confidence 87 788999999999999999887 666666665544
No 68
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.53 E-value=8.7e-14 Score=133.89 Aligned_cols=139 Identities=20% Similarity=0.348 Sum_probs=108.6
Q ss_pred CCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHH----HHHHHHHhhCCCeE
Q 015544 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYI----RHLVFNTAKRGWNV 192 (405)
Q Consensus 117 ~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~----~~~~~~l~~~Gy~v 192 (405)
..+.+...+++.||..+.+.-.... ...+|+|++.||+.++|..+.. +.++..|+++||+|
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~---------------~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDV 109 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRG---------------KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDV 109 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCC---------------CCCCCcEEEeeccccccccceecCccccHHHHHHHcCCce
Confidence 3566889999999997777655322 2688999999999987766443 24677789999999
Q ss_pred EEEeCCCCCCCCC-------CCCCcccCCCh----hHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC-CCCc
Q 015544 193 VVSNHRGLGGVSI-------TSDCFYNAGWT----EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-KTPV 260 (405)
Q Consensus 193 v~~d~rG~G~s~~-------~~~~~~~~~~~----~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~-~~~v 260 (405)
..-|.||..-|.. ....++...|. .|+-++|+++.+.-...+++.+|||.|+.+....+.+.++ +.+|
T Consensus 110 WLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI 189 (403)
T KOG2624|consen 110 WLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKI 189 (403)
T ss_pred eeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhh
Confidence 9999999554421 12234444454 4999999999998888899999999999999998888765 2379
Q ss_pred eEEEEEcCCC
Q 015544 261 AGAAAICSPW 270 (405)
Q Consensus 261 ~~~v~i~~~~ 270 (405)
+.+++++|..
T Consensus 190 ~~~~aLAP~~ 199 (403)
T KOG2624|consen 190 KSFIALAPAA 199 (403)
T ss_pred heeeeecchh
Confidence 9999999876
No 69
>PRK10115 protease 2; Provisional
Probab=99.50 E-value=5.8e-13 Score=138.82 Aligned_cols=202 Identities=14% Similarity=0.119 Sum_probs=138.2
Q ss_pred CcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 119 ~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
..++..++..||..|.+.+..+++.. .+.+.|+||++||..+.+...........++++||.|+..|.|
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~-----------~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~R 483 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHF-----------RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVR 483 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCC-----------CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcC
Confidence 34555677899999998766654311 1245699999999877665544456667788899999999999
Q ss_pred CCCCCCCCCCC----cccCCChhHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 199 GLGGVSITSDC----FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 199 G~G~s~~~~~~----~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
|.|+-...... .......+|+.++++++.++. ...++.+.|.|.||.++...+..+|+ .++|+|+..+..|+
T Consensus 484 Gs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D~ 561 (686)
T PRK10115 484 GGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVDV 561 (686)
T ss_pred CCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchhH
Confidence 97754321111 111234589999999998764 25689999999999999999998998 89999999888887
Q ss_pred hhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccccCCCCCHHHHHHhCCCcccc
Q 015544 273 LIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV 352 (405)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l 352 (405)
... +. +. .+ .....++.+. ..+. -....+|++..|+.+.+
T Consensus 562 ~~~---~~--------~~---------------~~-----------p~~~~~~~e~-G~p~--~~~~~~~l~~~SP~~~v 601 (686)
T PRK10115 562 VTT---ML--------DE---------------SI-----------PLTTGEFEEW-GNPQ--DPQYYEYMKSYSPYDNV 601 (686)
T ss_pred hhh---cc--------cC---------------CC-----------CCChhHHHHh-CCCC--CHHHHHHHHHcCchhcc
Confidence 311 00 00 00 0000011110 0000 01234677778999999
Q ss_pred CcccCc-EEEEeeCCCCcCCCC
Q 015544 353 GNVSIP-LLCISSLDDPVCTVE 373 (405)
Q Consensus 353 ~~I~vP-~Lii~g~dD~ivp~~ 373 (405)
.+++.| +|+++|.+|+-||+.
T Consensus 602 ~~~~~P~lLi~~g~~D~RV~~~ 623 (686)
T PRK10115 602 TAQAYPHLLVTTGLHDSQVQYW 623 (686)
T ss_pred CccCCCceeEEecCCCCCcCch
Confidence 999999 667799999999986
No 70
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.50 E-value=5.1e-13 Score=114.52 Aligned_cols=112 Identities=17% Similarity=0.228 Sum_probs=89.9
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~l 237 (405)
.+..+||++||+-++....++..++..+.+.|+.++.+|++|.|.|+..-..-.....++|+..+++++..... .--++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr-~v~vi 109 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNR-VVPVI 109 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCce-EEEEE
Confidence 45678999999988777888899999999999999999999999998653221112345999999999976421 12468
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChh
Q 015544 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 238 vG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
+|||-||.++..|+..+.+ +.-++-+++-+|..
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~ 142 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLK 142 (269)
T ss_pred EeecCccHHHHHHHHhhcC---chheEEcccccchh
Confidence 9999999999999999887 77788787777773
No 71
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.50 E-value=8.3e-14 Score=125.13 Aligned_cols=173 Identities=19% Similarity=0.204 Sum_probs=109.0
Q ss_pred HHHHHHHhhCCCeEEEEeCCCCCCCCCCC----CCcccCCChhHHHHHHHHHHHhCC--CCcEEEEEEcHHHHHHHHHHh
Q 015544 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITS----DCFYNAGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLG 252 (405)
Q Consensus 179 ~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~----~~~~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvG~S~GG~ia~~yl~ 252 (405)
......++++||.|+.+|+||.++..... .........+|+.++++++.+++. .+++.++|+|+||.+++..+.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 34567788999999999999987542110 111111235799999999988763 468999999999999999999
Q ss_pred hcCCCCCceEEEEEcCCCChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccc
Q 015544 253 EEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCL 332 (405)
Q Consensus 253 ~~~~~~~v~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~ 332 (405)
.+++ .++++|+.++..|.......... +... ++...
T Consensus 84 ~~~~--~f~a~v~~~g~~d~~~~~~~~~~------~~~~--------------------------------~~~~~---- 119 (213)
T PF00326_consen 84 QHPD--RFKAAVAGAGVSDLFSYYGTTDI------YTKA--------------------------------EYLEY---- 119 (213)
T ss_dssp HTCC--GSSEEEEESE-SSTTCSBHHTCC------HHHG--------------------------------HHHHH----
T ss_pred ccce--eeeeeeccceecchhcccccccc------cccc--------------------------------ccccc----
Confidence 8888 79999999998887322111000 0000 00000
Q ss_pred cCCCCCHHHHHHhCCCccccCc--ccCcEEEEeeCCCCcCCCC-CCCh--HHHhcCCcEEEEeeccCcc
Q 015544 333 VGKFETVDTYYRNCSSSTYVGN--VSIPLLCISSLDDPVCTVE-AIPW--DECRSNCSIHAIVSIFTSF 396 (405)
Q Consensus 333 ~~g~~~~~~yy~~~s~~~~l~~--I~vP~Lii~g~dD~ivp~~-~~~~--~~~~~~~~~~l~~t~~~~~ 396 (405)
.......+.|+..++...+.+ +++|+|++||++|+.||.+ +... ...+.+.++.+.+-...+|
T Consensus 120 -~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 120 -GDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp -SSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred -CccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 000012344444555666677 8999999999999999987 3222 2333455677766655544
No 72
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.50 E-value=3.8e-14 Score=120.08 Aligned_cols=214 Identities=14% Similarity=0.118 Sum_probs=125.8
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhh-CCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~-~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
--|++++|..|++...| ......+-+ .-+.+|++|.||+|.|..+..++-..-+.+|...+++.++.. .-.++.++|
T Consensus 43 ~~iLlipGalGs~~tDf-~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlG 120 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDF-PPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLG 120 (277)
T ss_pred ceeEecccccccccccC-CHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEee
Confidence 35889999999887776 555555544 349999999999999987655543333446777777766543 234899999
Q ss_pred EcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcC
Q 015544 240 TSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKS 319 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 319 (405)
+|=||..++..|+++++ .|...|..+...-........-+.. +.. ++... +.+..+......+.. .
T Consensus 121 WSdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~ma~kgi-Rdv-~kWs~--------r~R~P~e~~Yg~e~f--~ 186 (277)
T KOG2984|consen 121 WSDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGAMAFKGI-RDV-NKWSA--------RGRQPYEDHYGPETF--R 186 (277)
T ss_pred ecCCCeEEEEeeccChh--hhhhheeecccceecchhHHHHhch-HHH-hhhhh--------hhcchHHHhcCHHHH--H
Confidence 99999999999999998 7888888876543322222111110 000 00010 111111111111111 0
Q ss_pred CCHHHHhhhcccccCCCCCHHHHHHhC---CCccccCcccCcEEEEeeCCCCcCCCCCCChH-HHhcCCcEEEEeeccCc
Q 015544 320 RSIRDFDSHATCLVGKFETVDTYYRNC---SSSTYVGNVSIPLLCISSLDDPVCTVEAIPWD-ECRSNCSIHAIVSIFTS 395 (405)
Q Consensus 320 ~~~~~fd~~~~~~~~g~~~~~~yy~~~---s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~-~~~~~~~~~l~~t~~~~ 395 (405)
++..+|.+. +..++..+ -|...+++|+||+|++||+.||+|+...+++- +......+.+.-.+-+-
T Consensus 187 ~~wa~wvD~----------v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn 256 (277)
T KOG2984|consen 187 TQWAAWVDV----------VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHN 256 (277)
T ss_pred HHHHHHHHH----------HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcc
Confidence 111122221 12222222 24567999999999999999999999887773 33333333333334444
Q ss_pred ccccc
Q 015544 396 FYVPF 400 (405)
Q Consensus 396 ~~~~~ 400 (405)
|++.|
T Consensus 257 ~hLry 261 (277)
T KOG2984|consen 257 FHLRY 261 (277)
T ss_pred eeeec
Confidence 44443
No 73
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.50 E-value=5e-14 Score=131.44 Aligned_cols=130 Identities=18% Similarity=0.158 Sum_probs=92.5
Q ss_pred CCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHH--H------HHHhhCCCeEEEEeCCCC
Q 015544 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL--V------FNTAKRGWNVVVSNHRGL 200 (405)
Q Consensus 129 dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~--~------~~l~~~Gy~vv~~d~rG~ 200 (405)
||..|+.|.+.| .. ......|+||..|++..+.....-... . ..++++||.||+.|.||.
T Consensus 1 DGv~L~adv~~P-~~-----------~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~ 68 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-----------DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGT 68 (272)
T ss_dssp TS-EEEEEEEEE--------------TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTS
T ss_pred CCCEEEEEEEec-CC-----------CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCccc
Confidence 899999999988 11 124678999999998643211110111 1 128899999999999999
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhh
Q 015544 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 201 G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~ 274 (405)
|.|+...... .....+|..++|+++.++ | +.+|.++|.|.+|...+..|+..+. .+++++..++..|...
T Consensus 69 g~S~G~~~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 69 GGSEGEFDPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp TTS-S-B-TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-SBTCC
T ss_pred ccCCCccccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccCCcccc
Confidence 9998765433 334568999999999887 5 5689999999999999998887766 7999999998887754
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.46 E-value=4.4e-12 Score=118.93 Aligned_cols=129 Identities=13% Similarity=0.158 Sum_probs=83.8
Q ss_pred CCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHH--HHHHHHhhCCCeEEEEeCCCCCCC-CC
Q 015544 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGV-SI 205 (405)
Q Consensus 129 dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~--~~~~~l~~~Gy~vv~~d~rG~G~s-~~ 205 (405)
-|..+.+..+.|+.. .....|+|+++||+.|+. ..+.. .+...+...|+.|+++|..++|.- ..
T Consensus 28 l~~~~~~~vy~P~~~------------~~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 28 LGCSMTFSVYFPPAS------------DSGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred cCCceEEEEEcCCcc------------cCCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 356677777766531 234689999999987654 33322 234556678999999998776610 00
Q ss_pred C--------CCCccc----C-----C----ChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEE
Q 015544 206 T--------SDCFYN----A-----G----WTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 264 (405)
Q Consensus 206 ~--------~~~~~~----~-----~----~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v 264 (405)
. ....|. . . ..+++.+.++.........+++++|+||||..++.++.++|+ .+++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~--~~~~~~ 172 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD--KYKSVS 172 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch--hEEEEE
Confidence 0 000010 0 0 123444444443333345689999999999999999999988 799999
Q ss_pred EEcCCCCh
Q 015544 265 AICSPWDL 272 (405)
Q Consensus 265 ~i~~~~~~ 272 (405)
++++..+.
T Consensus 173 ~~~~~~~~ 180 (283)
T PLN02442 173 AFAPIANP 180 (283)
T ss_pred EECCccCc
Confidence 99987664
No 75
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.45 E-value=6.8e-13 Score=118.09 Aligned_cols=107 Identities=21% Similarity=0.283 Sum_probs=78.2
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhh-CCCeEEEEeCCCCCCCCCCCCCccc-CCChhHHHHHHHHHHHhCCCCcE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKAPL 235 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~-~Gy~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~l~~l~~~~~~~~i 235 (405)
...|++++.||. |.|.-.| ..++..+.. ...+|+++|+||||.+....+.... .....|+-++++++-...+ .+|
T Consensus 72 t~gpil~l~HG~-G~S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~i 148 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELP-PQI 148 (343)
T ss_pred CCccEEEEeecC-cccchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCC-Cce
Confidence 577999999996 4454445 678887765 4679999999999999876554433 3455788877777654433 379
Q ss_pred EEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcC
Q 015544 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 236 ~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~ 268 (405)
++|||||||.|+...+...--+ .+.|++.|+-
T Consensus 149 ilVGHSmGGaIav~~a~~k~lp-sl~Gl~viDV 180 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLP-SLAGLVVIDV 180 (343)
T ss_pred EEEeccccchhhhhhhhhhhch-hhhceEEEEE
Confidence 9999999999998766554322 3888888864
No 76
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.45 E-value=2.6e-12 Score=125.16 Aligned_cols=112 Identities=14% Similarity=0.052 Sum_probs=77.3
Q ss_pred CCCcEEEEeCCCCCCCcc-----------HHHHHHHHH---HhhCCCeEEEEeCCCCCCCC-------CC------CCCc
Q 015544 158 DTTPIAIVIPGLTSDSAA-----------SYIRHLVFN---TAKRGWNVVVSNHRGLGGVS-------IT------SDCF 210 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~-----------~y~~~~~~~---l~~~Gy~vv~~d~rG~G~s~-------~~------~~~~ 210 (405)
+..++||++|+++|+++. .|+..++-. +-...|-||++|..|.|.|. .+ +.+.
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 456899999999996532 233555432 33456999999999965421 10 1111
Q ss_pred cc----CCChhHHHHHHHHHHHhCCCCcEE-EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 211 YN----AGWTEDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 211 ~~----~~~~~Dl~~~l~~l~~~~~~~~i~-lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
+. .-..+|+.+.+..+.++....++. ++||||||++++.++.++|+ +++++|++++...
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~--~v~~lv~ia~~~~ 197 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH--MVERMIGVIGNPQ 197 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEecCCC
Confidence 11 112356666666666666667776 99999999999999999999 8999999987543
No 77
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.39 E-value=9.4e-13 Score=114.17 Aligned_cols=125 Identities=23% Similarity=0.323 Sum_probs=89.2
Q ss_pred EEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 123 ~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
..+..+||..+..+-+.... +.+--+++.|-+|-. ..|.+.++..++++||.|+.+|+||.|+
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~----------------~~~g~~~va~a~Gv~-~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~ 70 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG----------------KASGRLVVAGATGVG-QYFYRRFAAAAAKAGFEVLTFDYRGIGQ 70 (281)
T ss_pred cccccCCCccCccccccCCC----------------CCCCcEEecccCCcc-hhHhHHHHHHhhccCceEEEEecccccC
Confidence 44677899999887664332 222244566666644 4455999999999999999999999999
Q ss_pred CCCCCCCccc---CCCh-hHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcC
Q 015544 203 VSITSDCFYN---AGWT-EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 203 s~~~~~~~~~---~~~~-~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~ 268 (405)
|..+...-.. .+|. .|+.++++.+++..|..+.+.+|||+||.+.. +++.++ +..++...++
T Consensus 71 S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~---k~~a~~vfG~ 136 (281)
T COG4757 71 SRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHP---KYAAFAVFGS 136 (281)
T ss_pred CCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCc---ccceeeEecc
Confidence 9876554222 2444 59999999999988989999999999999843 233333 3445444443
No 78
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.37 E-value=7.4e-12 Score=136.63 Aligned_cols=108 Identities=14% Similarity=0.114 Sum_probs=73.6
Q ss_pred CCCcEEEEeCCCCCCCccHHHH-----HHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHH---HHh
Q 015544 158 DTTPIAIVIPGLTSDSAASYIR-----HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYL---HHE 229 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~-----~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l---~~~ 229 (405)
...|+||++||+.++ ...| + .+++.|.++||+|+++|+ |.++... .....+..+++..+++.+ +..
T Consensus 65 ~~~~plllvhg~~~~-~~~~-d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~-~~~~~~l~~~i~~l~~~l~~v~~~ 138 (994)
T PRK07868 65 PVGPPVLMVHPMMMS-ADMW-DVTRDDGAVGILHRAGLDPWVIDF---GSPDKVE-GGMERNLADHVVALSEAIDTVKDV 138 (994)
T ss_pred CCCCcEEEECCCCCC-ccce-ecCCcccHHHHHHHCCCEEEEEcC---CCCChhH-cCccCCHHHHHHHHHHHHHHHHHh
Confidence 355789999998653 3333 2 247889999999999995 4443321 111233445554444444 333
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChh
Q 015544 230 YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 230 ~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
. ..++.++||||||.+++.+++.++++ +|+++|++++|.|+.
T Consensus 139 ~-~~~v~lvG~s~GG~~a~~~aa~~~~~-~v~~lvl~~~~~d~~ 180 (994)
T PRK07868 139 T-GRDVHLVGYSQGGMFCYQAAAYRRSK-DIASIVTFGSPVDTL 180 (994)
T ss_pred h-CCceEEEEEChhHHHHHHHHHhcCCC-ccceEEEEecccccC
Confidence 2 34899999999999999998865432 699999999987753
No 79
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.37 E-value=3.4e-11 Score=112.54 Aligned_cols=130 Identities=15% Similarity=0.180 Sum_probs=80.6
Q ss_pred CCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHH-HHHHHhhCCCeEEEEeC--CCCCCCCC
Q 015544 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRH-LVFNTAKRGWNVVVSNH--RGLGGVSI 205 (405)
Q Consensus 129 dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~-~~~~l~~~Gy~vv~~d~--rG~G~s~~ 205 (405)
.|....+.++.|+.. .....|+|+++||+.++...+.... +...+.+.|+.|+++|. ||+|.+..
T Consensus 23 ~~~~~~~~v~~P~~~------------~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~ 90 (275)
T TIGR02821 23 CGVPMTFGVFLPPQA------------AAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGE 90 (275)
T ss_pred cCCceEEEEEcCCCc------------cCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCC
Confidence 344556666666531 1235799999999976544322122 23334457999999998 66654321
Q ss_pred CC-------CCcc----------cCCChhHH-HHHHHHHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEE
Q 015544 206 TS-------DCFY----------NAGWTEDA-REVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAA 265 (405)
Q Consensus 206 ~~-------~~~~----------~~~~~~Dl-~~~l~~l~~~~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~ 265 (405)
.. ...| ...+.+.+ .++...+.+.++ ..+++++||||||.+++.++.++|+ .++++++
T Consensus 91 ~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~~ 168 (275)
T TIGR02821 91 DDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVSA 168 (275)
T ss_pred cccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEEE
Confidence 00 0000 00112232 233334444443 4589999999999999999999998 7999999
Q ss_pred EcCCCCh
Q 015544 266 ICSPWDL 272 (405)
Q Consensus 266 i~~~~~~ 272 (405)
+++..+.
T Consensus 169 ~~~~~~~ 175 (275)
T TIGR02821 169 FAPIVAP 175 (275)
T ss_pred ECCccCc
Confidence 9887664
No 80
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.37 E-value=6.4e-12 Score=122.61 Aligned_cols=112 Identities=19% Similarity=0.211 Sum_probs=83.2
Q ss_pred CCCCcEEEEeCCCCCCC-ccHHHHHHHHHHhh--CCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC--C
Q 015544 157 DDTTPIAIVIPGLTSDS-AASYIRHLVFNTAK--RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--P 231 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s-~~~y~~~~~~~l~~--~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~ 231 (405)
+.++|++|++||+.++. ...|+..++..+.. ..|+|+++|++|+|.+..+....+.....+++.++++++.... +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 35678999999997643 24565667776653 3699999999999987654322222223367888888886543 4
Q ss_pred CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 232 KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 232 ~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
.++++++||||||.++..++...+. +|.+++.++|..
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPAg 154 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPAG 154 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCCC
Confidence 6789999999999999998877776 799999999843
No 81
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.36 E-value=4.2e-12 Score=112.75 Aligned_cols=200 Identities=20% Similarity=0.265 Sum_probs=125.4
Q ss_pred CcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 119 SYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 119 ~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
+--+..++..+|..|..+...|.. .....|.||-.||.+|+...+ ..+.. ++..||.|+++|-|
T Consensus 55 e~ydvTf~g~~g~rI~gwlvlP~~-------------~~~~~P~vV~fhGY~g~~g~~--~~~l~-wa~~Gyavf~MdvR 118 (321)
T COG3458 55 EVYDVTFTGYGGARIKGWLVLPRH-------------EKGKLPAVVQFHGYGGRGGEW--HDMLH-WAVAGYAVFVMDVR 118 (321)
T ss_pred EEEEEEEeccCCceEEEEEEeecc-------------cCCccceEEEEeeccCCCCCc--ccccc-ccccceeEEEEecc
Confidence 334556677789999976665544 236789999999998765432 23333 34469999999999
Q ss_pred CCCCCCCCC---------------------CCcccCCChhHHHHHHHHHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcC
Q 015544 199 GLGGVSITS---------------------DCFYNAGWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEG 255 (405)
Q Consensus 199 G~G~s~~~~---------------------~~~~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvG~S~GG~ia~~yl~~~~ 255 (405)
|.|.+...+ +..|..+...|+..+++.+..-.+ .++|.+.|.|.||.|++..++..+
T Consensus 119 GQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~ 198 (321)
T COG3458 119 GQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP 198 (321)
T ss_pred cCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh
Confidence 998773211 011122334688888888876553 678999999999999988777766
Q ss_pred CCCCceEEEEEcCCCChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccccCC
Q 015544 256 EKTPVAGAAAICSPWDLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGK 335 (405)
Q Consensus 256 ~~~~v~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g 335 (405)
. +++++++-|-..-. .++++- ....-|+ .+..+++.|.+. +.+--+++.-||-
T Consensus 199 r---ik~~~~~~Pfl~df--~r~i~~-~~~~~yd-----ei~~y~k~h~~~--------e~~v~~TL~yfD~-------- 251 (321)
T COG3458 199 R---IKAVVADYPFLSDF--PRAIEL-ATEGPYD-----EIQTYFKRHDPK--------EAEVFETLSYFDI-------- 251 (321)
T ss_pred h---hhcccccccccccc--hhheee-cccCcHH-----HHHHHHHhcCch--------HHHHHHHHhhhhh--------
Confidence 4 88888876643221 011100 0011122 233444444422 1111122222322
Q ss_pred CCCHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCC
Q 015544 336 FETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEA 374 (405)
Q Consensus 336 ~~~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~ 374 (405)
.+..++|++|+|+.-|..|++||+..
T Consensus 252 -------------~n~A~RiK~pvL~svgL~D~vcpPst 277 (321)
T COG3458 252 -------------VNLAARIKVPVLMSVGLMDPVCPPST 277 (321)
T ss_pred -------------hhHHHhhccceEEeecccCCCCCChh
Confidence 34557899999999999999999973
No 82
>PRK11460 putative hydrolase; Provisional
Probab=99.36 E-value=1.6e-11 Score=111.68 Aligned_cols=107 Identities=12% Similarity=0.098 Sum_probs=68.7
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCC-CCccc------CCCh-------hHHHHH
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS-DCFYN------AGWT-------EDAREV 222 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~-~~~~~------~~~~-------~Dl~~~ 222 (405)
.+..|+||++||++++ ...+ ..+++.+.+.++.+.+++.+|........ ...+. .... +++.+.
T Consensus 13 ~~~~~~vIlLHG~G~~-~~~~-~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 13 KPAQQLLLLFHGVGDN-PVAM-GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCCcEEEEEeCCCCC-hHHH-HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 3567899999999654 4444 78899998877777777788754321110 10110 0111 123344
Q ss_pred HHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEc
Q 015544 223 IGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (405)
Q Consensus 223 l~~l~~~~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~ 267 (405)
++++.+++ +..+++++|||+||.+++.++...++ .+.++++++
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~s 135 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFS 135 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEec
Confidence 55555554 34589999999999999998888776 566666554
No 83
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.35 E-value=3e-12 Score=119.33 Aligned_cols=114 Identities=16% Similarity=0.169 Sum_probs=82.7
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHh-hCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHh--CCCC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTA-KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKA 233 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~-~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~--~~~~ 233 (405)
+..+|++|++||+.++....|...+...+. +.+|+|+++|++|++...............+++.++++.+.+. .+..
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 356789999999988764555566766554 4689999999999743221111001112236888889988776 3456
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 234 ~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+++++||||||.++..++...++ ++.+++.++|....
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~p~ 149 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAGPL 149 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCccc
Confidence 89999999999999999888887 79999999875433
No 84
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.34 E-value=1.1e-10 Score=105.26 Aligned_cols=127 Identities=16% Similarity=0.233 Sum_probs=92.5
Q ss_pred EEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC
Q 015544 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (405)
Q Consensus 124 ~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s 203 (405)
.+...+|..+.++-..... .+..+...+||-+||-+|+ +..+ +.+...|.+.|.|++.+|+||+|.+
T Consensus 10 k~~~~~~~~~~~~a~y~D~-----------~~~gs~~gTVv~~hGsPGS-H~DF-kYi~~~l~~~~iR~I~iN~PGf~~t 76 (297)
T PF06342_consen 10 KFQAENGKIVTVQAVYEDS-----------LPSGSPLGTVVAFHGSPGS-HNDF-KYIRPPLDEAGIRFIGINYPGFGFT 76 (297)
T ss_pred EcccccCceEEEEEEEEec-----------CCCCCCceeEEEecCCCCC-ccch-hhhhhHHHHcCeEEEEeCCCCCCCC
Confidence 3455678888777544322 1234566799999999985 4445 7888999999999999999999999
Q ss_pred CCCCCCcccCCChhHHHHHHHHHHHhCC-CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 204 SITSDCFYNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~l~~l~~~~~-~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
+......|+. .+-...++.+..+.. ..++.++|||.||-.|+..+..++ ..|+++++|+-
T Consensus 77 ~~~~~~~~~n---~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G 137 (297)
T PF06342_consen 77 PGYPDQQYTN---EERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP----LHGLVLINPPG 137 (297)
T ss_pred CCCcccccCh---HHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc----cceEEEecCCc
Confidence 8766655543 333344444443332 468999999999999999998883 66999998853
No 85
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.32 E-value=2.3e-11 Score=120.34 Aligned_cols=253 Identities=16% Similarity=0.096 Sum_probs=152.2
Q ss_pred CCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCC-----CCCccHHHHHHHH---HHhhCC
Q 015544 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT-----SDSAASYIRHLVF---NTAKRG 189 (405)
Q Consensus 118 ~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~-----g~s~~~y~~~~~~---~l~~~G 189 (405)
..++.+.+++.||.+|+.|.+.|.+ ....|+++..+-+. |.... ...... .++.+|
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~--------------~g~~Pvll~~~~~Py~k~~~~~~~--~~~~~p~~~~~aa~G 80 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG--------------AGPLPVLLSRTRLPYRKRNGTFGP--QLSALPQPAWFAAQG 80 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC--------------CCCCceeEEeeccccccccccCcc--hhhcccccceeecCc
Confidence 3345788999999999999998865 35789998888111 00111 122333 578899
Q ss_pred CeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcC
Q 015544 190 WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 190 y~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~-~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~ 268 (405)
|.||..|.||.|.|++.....++ ...+|-.++|+++.++ ..+.++..+|.|++|...+..|+..+. -+++++..++
T Consensus 81 YavV~qDvRG~~~SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~ 157 (563)
T COG2936 81 YAVVNQDVRGRGGSEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEG 157 (563)
T ss_pred eEEEEecccccccCCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeeccccc
Confidence 99999999999999988776666 5678999999999775 468899999999999999998888877 6999999998
Q ss_pred CCChhhhHHHHhhhhHHHHHHHHH-HHhHHHHHHhhcccccccCCHHHHhcCCCHHHHh-hhcc-cccC-----CCCCHH
Q 015544 269 PWDLLIGDRFIGRRLIQKIYDRAL-TIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFD-SHAT-CLVG-----KFETVD 340 (405)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd-~~~~-~~~~-----g~~~~~ 340 (405)
..|......+........++.... +...+.....+........+..... +...++.. .... .+.. -....+
T Consensus 158 ~~D~y~d~~~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~e~~p~~~~~~~~hp~~d 236 (563)
T COG2936 158 LVDRYRDDAFYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVG-AERWRDAPTELLEGEPYFLELWLEHPLRD 236 (563)
T ss_pred cccccccccccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhh-hccccccccchhccCcccchhhhcCCCcc
Confidence 888654433322111111111000 0000000000011000000000000 00000000 0000 0000 123345
Q ss_pred HHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcCCcEEEEee
Q 015544 341 TYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSNCSIHAIVS 391 (405)
Q Consensus 341 ~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~t 391 (405)
+||++.+....+.+|++|+|.|.|=.|+.... .+......+..+..+++.
T Consensus 237 dfW~~~~~~~d~~~i~vP~L~i~gW~D~~l~~-~~~~~~~~~~r~~~lvvg 286 (563)
T COG2936 237 DFWRRGDRVADLSKIKVPALVIGGWSDGYLHT-AIKLFAFLRSRPVKLVVG 286 (563)
T ss_pred chhhccCcccccccCCCcEEEEcccccccccc-hHHHhhhcccCCceeEEc
Confidence 58887777788999999999999999986654 333333333334555555
No 86
>PRK10162 acetyl esterase; Provisional
Probab=99.26 E-value=3.5e-10 Score=107.92 Aligned_cols=128 Identities=16% Similarity=0.105 Sum_probs=90.2
Q ss_pred ceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCC--CCCccHHHHHHHHHHhh-CCCeEEEEeC
Q 015544 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVVSNH 197 (405)
Q Consensus 121 ~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~--g~s~~~y~~~~~~~l~~-~Gy~vv~~d~ 197 (405)
+...+...+| .+.++++.|.. ...|+||++||.+ .++...+ ..++..+++ .|+.|+.+|+
T Consensus 58 ~~~~i~~~~g-~i~~~~y~P~~---------------~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~vdY 120 (318)
T PRK10162 58 RAYMVPTPYG-QVETRLYYPQP---------------DSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIGIDY 120 (318)
T ss_pred EEEEEecCCC-ceEEEEECCCC---------------CCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEEecC
Confidence 3444565665 58888887743 2468999999943 1223334 567777776 5999999999
Q ss_pred CCCCCCCCCCCCcccCCChhHHHHHHHHHHHh---C--CCCcEEEEEEcHHHHHHHHHHhhcCC----CCCceEEEEEcC
Q 015544 198 RGLGGVSITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAAICS 268 (405)
Q Consensus 198 rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~---~--~~~~i~lvG~S~GG~ia~~yl~~~~~----~~~v~~~v~i~~ 268 (405)
|.....+.+ ...+|+.++++++.+. + ...+++++|+|+||++++..+....+ ...+.+++++++
T Consensus 121 rlape~~~p-------~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 121 TLSPEARFP-------QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred CCCCCCCCC-------CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 975443211 2468999999998653 3 34589999999999999988764321 136899999998
Q ss_pred CCCh
Q 015544 269 PWDL 272 (405)
Q Consensus 269 ~~~~ 272 (405)
..+.
T Consensus 194 ~~~~ 197 (318)
T PRK10162 194 LYGL 197 (318)
T ss_pred ccCC
Confidence 7775
No 87
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.26 E-value=3.1e-10 Score=103.15 Aligned_cols=126 Identities=18% Similarity=0.168 Sum_probs=92.1
Q ss_pred eEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC-C
Q 015544 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG-L 200 (405)
Q Consensus 122 r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG-~ 200 (405)
...+..+| +.+...+..|.. ....|.||++|++.|-.. .++.+++.++++||.|+++|+-+ .
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~--------------~~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~ 66 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAG--------------AGGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGRQ 66 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCc--------------CCCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhccC
Confidence 44566666 677777777654 223399999999987433 57999999999999999999987 3
Q ss_pred CCCCCCC--CCc-c--------cCCChhHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEc
Q 015544 201 GGVSITS--DCF-Y--------NAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (405)
Q Consensus 201 G~s~~~~--~~~-~--------~~~~~~Dl~~~l~~l~~~~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~ 267 (405)
|...... +.. . ......|+.++++++..+- ...+|.++|+||||.+++.++...++ ++++|+.-
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~fy 143 (236)
T COG0412 67 GDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAFY 143 (236)
T ss_pred CCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEec
Confidence 4332211 100 0 0123369999999998764 25689999999999999999988775 88888664
No 88
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.25 E-value=1e-10 Score=105.90 Aligned_cols=102 Identities=14% Similarity=0.232 Sum_probs=69.7
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhC--CCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~--Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~l 237 (405)
.|.++++||+.++...+. . ....+... .|+++++|+||||.|. .. ......+.+|+..+++ .....++.+
T Consensus 21 ~~~i~~~hg~~~~~~~~~-~-~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~----~~~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR-P-VFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLD----ALGLEKVVL 92 (282)
T ss_pred CCeEEEeCCCCCchhhhH-H-HHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHH----HhCCCceEE
Confidence 458999999987544433 3 21222221 1999999999999987 11 0000111345555444 344446999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 238 vG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
+|||+||.+++.++.++++ .++++|+++++..
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~~ 124 (282)
T COG0596 93 VGHSMGGAVALALALRHPD--RVRGLVLIGPAPP 124 (282)
T ss_pred EEecccHHHHHHHHHhcch--hhheeeEecCCCC
Confidence 9999999999999999998 8999999997643
No 89
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.25 E-value=3e-10 Score=107.69 Aligned_cols=135 Identities=19% Similarity=0.118 Sum_probs=87.4
Q ss_pred CCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 117 ~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
.+...+..++..+|..+....+.|.. ...+.|.||.+||.++.+.. + ...+ .++.+||.|+.+|
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~-------------~~~~~Pavv~~hGyg~~~~~-~-~~~~-~~a~~G~~vl~~d 116 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKN-------------AKGKLPAVVQFHGYGGRSGD-P-FDLL-PWAAAGYAVLAMD 116 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES--------------SSSSEEEEEEE--TT--GGG-H-HHHH-HHHHTT-EEEEE-
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCC-------------CCCCcCEEEEecCCCCCCCC-c-cccc-ccccCCeEEEEec
Confidence 34555667777788888877777653 24678999999999765333 3 2232 3667899999999
Q ss_pred CCCCCCCC-CCC-------CCcccC------------CChhHHHHHHHHHHHhCC--CCcEEEEEEcHHHHHHHHHHhhc
Q 015544 197 HRGLGGVS-ITS-------DCFYNA------------GWTEDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 197 ~rG~G~s~-~~~-------~~~~~~------------~~~~Dl~~~l~~l~~~~~--~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
.||+|+.. ... ...... +...|...+++++...-. .++|.+.|.|+||.+++..++-.
T Consensus 117 ~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd 196 (320)
T PF05448_consen 117 VRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD 196 (320)
T ss_dssp -TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC
Confidence 99999322 110 000000 112588899999987532 46899999999999999998887
Q ss_pred CCCCCceEEEEEcCCC
Q 015544 255 GEKTPVAGAAAICSPW 270 (405)
Q Consensus 255 ~~~~~v~~~v~i~~~~ 270 (405)
+. |+++++..|..
T Consensus 197 ~r---v~~~~~~vP~l 209 (320)
T PF05448_consen 197 PR---VKAAAADVPFL 209 (320)
T ss_dssp ST----SEEEEESESS
T ss_pred cc---ccEEEecCCCc
Confidence 64 99999887743
No 90
>PLN00021 chlorophyllase
Probab=99.24 E-value=9e-11 Score=111.08 Aligned_cols=116 Identities=19% Similarity=0.142 Sum_probs=85.0
Q ss_pred EEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcc
Q 015544 132 MIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY 211 (405)
Q Consensus 132 ~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~ 211 (405)
.+.++++.|.. ....|+||++||+.++ ...| ..+++.++++||.|+++|++|++....
T Consensus 38 ~~p~~v~~P~~--------------~g~~PvVv~lHG~~~~-~~~y-~~l~~~Las~G~~VvapD~~g~~~~~~------ 95 (313)
T PLN00021 38 PKPLLVATPSE--------------AGTYPVLLFLHGYLLY-NSFY-SQLLQHIASHGFIVVAPQLYTLAGPDG------ 95 (313)
T ss_pred CceEEEEeCCC--------------CCCCCEEEEECCCCCC-cccH-HHHHHHHHhCCCEEEEecCCCcCCCCc------
Confidence 45666776643 3467999999999654 4455 789999999999999999999653211
Q ss_pred cCCChhHHHHHHHHHHHhC----------CCCcEEEEEEcHHHHHHHHHHhhcCCC---CCceEEEEEcCCC
Q 015544 212 NAGWTEDAREVIGYLHHEY----------PKAPLFAIGTSIGANILVKYLGEEGEK---TPVAGAAAICSPW 270 (405)
Q Consensus 212 ~~~~~~Dl~~~l~~l~~~~----------~~~~i~lvG~S~GG~ia~~yl~~~~~~---~~v~~~v~i~~~~ 270 (405)
....+|..++++++.+.. ...+++++||||||.+++.++.++++. .+++++|.+++..
T Consensus 96 -~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 96 -TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred -hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 123466777777776531 125799999999999999999887642 2688999887653
No 91
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.23 E-value=1.3e-10 Score=107.07 Aligned_cols=109 Identities=22% Similarity=0.358 Sum_probs=74.2
Q ss_pred CCcEEEEeCCCCCCCc-cHHHHHHHHHHhhCCCeEEEEeCCC----CCCCCCCCCCcccCCChhHHHHHHHHHHHhC---
Q 015544 159 TTPIAIVIPGLTSDSA-ASYIRHLVFNTAKRGWNVVVSNHRG----LGGVSITSDCFYNAGWTEDAREVIGYLHHEY--- 230 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~-~~y~~~~~~~l~~~Gy~vv~~d~rG----~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~--- 230 (405)
...+||+|.|++.+-. -.|+..+++.+...||.++-+.++. +|-+... ..++|+.++++|++...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~-------~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLD-------RDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HH-------HHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhh-------hHHHHHHHHHHHHHHhhccc
Confidence 4567999999976544 4788999999988899999999874 3332221 23689999999999883
Q ss_pred -CCCcEEEEEEcHHHHHHHHHHhhcCC---CCCceEEEEEcCCCChhh
Q 015544 231 -PKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 231 -~~~~i~lvG~S~GG~ia~~yl~~~~~---~~~v~~~v~i~~~~~~~~ 274 (405)
...+|+++|||-|+.-++.|+..... ..+|+++|+.+|..|-+.
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 56799999999999999999987653 347999999999877643
No 92
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.22 E-value=3.3e-11 Score=108.64 Aligned_cols=106 Identities=17% Similarity=0.235 Sum_probs=74.9
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC-CCCCCCC---cc----c---CCChhHHHHHHHHH
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG-VSITSDC---FY----N---AGWTEDAREVIGYL 226 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~-s~~~~~~---~~----~---~~~~~Dl~~~l~~l 226 (405)
.+.|.||++|++.|-. ..++.+++.++++||.|+++|+-+-.. ....... .. . ....+|+.++++++
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4689999999998743 556899999999999999999865433 1111111 11 0 01236888899999
Q ss_pred HHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcC
Q 015544 227 HHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 227 ~~~~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~ 268 (405)
+++. ...++.++|+|+||.+++.++.+. + .++++|+..+
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~--~~~a~v~~yg 130 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD-P--RVDAAVSFYG 130 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT-T--TSSEEEEES-
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc-c--ccceEEEEcC
Confidence 8875 356999999999999999888776 3 5999998765
No 93
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.14 E-value=5.1e-10 Score=111.42 Aligned_cols=109 Identities=14% Similarity=0.122 Sum_probs=83.0
Q ss_pred CCcEEEEeCCCCCCCccHHH------HHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCC
Q 015544 159 TTPIAIVIPGLTSDSAASYI------RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK 232 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~------~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~ 232 (405)
.+..|||+|.+- ...|| +++++++.++|++|+++|+++-+... ....-.++.+.+.++++.+++..+.
T Consensus 214 ~~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~ 287 (560)
T TIGR01839 214 HARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGS 287 (560)
T ss_pred CCCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 345577999975 23333 57999999999999999999855432 1111123346888999999998888
Q ss_pred CcEEEEEEcHHHHHHHH----HHhhcCCCCCceEEEEEcCCCChhh
Q 015544 233 APLFAIGTSIGANILVK----YLGEEGEKTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 233 ~~i~lvG~S~GG~ia~~----yl~~~~~~~~v~~~v~i~~~~~~~~ 274 (405)
.++.++|+||||.++.. |++.++++ +|+.++++.++.|+..
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~-~V~sltllatplDf~~ 332 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLR-KVNSLTYLVSLLDSTM 332 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCC-ceeeEEeeecccccCC
Confidence 89999999999999987 66666532 6999999999998754
No 94
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.11 E-value=4.9e-10 Score=116.03 Aligned_cols=112 Identities=16% Similarity=0.141 Sum_probs=79.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCC---------CC-Cc-c-c-----------CCC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT---------SD-CF-Y-N-----------AGW 215 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~---------~~-~~-~-~-----------~~~ 215 (405)
..|+||++||++++. ..| +.+++.+.++||+|+++|+||||.+... .. .. | + ...
T Consensus 448 g~P~VVllHG~~g~~-~~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAK-ENA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCH-HHH-HHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 458999999998753 444 7899999999999999999999998432 11 11 1 1 011
Q ss_pred hhHHHHHHHHHH------Hh------CCCCcEEEEEEcHHHHHHHHHHhhcCCC---C------CceEEEEEcCCCCh
Q 015544 216 TEDAREVIGYLH------HE------YPKAPLFAIGTSIGANILVKYLGEEGEK---T------PVAGAAAICSPWDL 272 (405)
Q Consensus 216 ~~Dl~~~l~~l~------~~------~~~~~i~lvG~S~GG~ia~~yl~~~~~~---~------~v~~~v~i~~~~~~ 272 (405)
..|+..+...++ .+ ++..+++++||||||.++..++...... . .+.++.+..+.-.+
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an~~~~~~~~~~l~~~~~a~l~~pgGgi 603 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYANTPLGSPTADALYAVNAASLQNPGGGI 603 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcCccccCCccccccccceeeeecCCccH
Confidence 258888888887 33 5678999999999999999999753320 0 35566666554433
No 95
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.08 E-value=7.1e-10 Score=116.68 Aligned_cols=181 Identities=13% Similarity=0.068 Sum_probs=108.2
Q ss_pred HHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHh----------------CCCCcEEEEEEcHH
Q 015544 180 HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE----------------YPKAPLFAIGTSIG 243 (405)
Q Consensus 180 ~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~----------------~~~~~i~lvG~S~G 243 (405)
.+..+++++||.||+.|.||+|+|++... .+.....+|..++|+|+..+ ..+.++.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~-~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT-TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc-cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 45678899999999999999999987532 22234568999999999843 23679999999999
Q ss_pred HHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHHHHhhhhHH--HHHHHHHHHhHHHHHHhhccc----ccccCCHHHHh
Q 015544 244 ANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQ--KIYDRALTIGLQDYAQLHEPR----YSRLANWEGIK 317 (405)
Q Consensus 244 G~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~ 317 (405)
|.+++..|+..++ .++++|.+++..+.....+ ....+. .-+...-...+.......... .......+..
T Consensus 349 G~~~~~aAa~~pp--~LkAIVp~a~is~~yd~yr--~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~- 423 (767)
T PRK05371 349 GTLPNAVATTGVE--GLETIIPEAAISSWYDYYR--ENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKL- 423 (767)
T ss_pred HHHHHHHHhhCCC--cceEEEeeCCCCcHHHHhh--cCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHH-
Confidence 9999988888777 6999999887765421110 000000 000000000000000000000 0000000000
Q ss_pred cCCCHHHHhhhcccccCCCCCHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCC
Q 015544 318 KSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVE 373 (405)
Q Consensus 318 ~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~ 373 (405)
+.++..... .......+||+..+....+++|++|+|+|||..|..++.+
T Consensus 424 ----~~~~~~~~~---~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~ 472 (767)
T PRK05371 424 ----LAELTAAQD---RKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPK 472 (767)
T ss_pred ----Hhhhhhhhh---hcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChH
Confidence 000110000 0112345788888888889999999999999999999865
No 96
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.07 E-value=4.1e-10 Score=83.84 Aligned_cols=46 Identities=24% Similarity=0.472 Sum_probs=40.1
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT 206 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~ 206 (405)
.+.+|+++||+.. ....| ..+++.|+++||.|+++|+||||.|+..
T Consensus 15 ~k~~v~i~HG~~e-h~~ry-~~~a~~L~~~G~~V~~~D~rGhG~S~g~ 60 (79)
T PF12146_consen 15 PKAVVVIVHGFGE-HSGRY-AHLAEFLAEQGYAVFAYDHRGHGRSEGK 60 (79)
T ss_pred CCEEEEEeCCcHH-HHHHH-HHHHHHHHhCCCEEEEECCCcCCCCCCc
Confidence 6889999999954 44556 8999999999999999999999999853
No 97
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.05 E-value=5.6e-09 Score=85.74 Aligned_cols=112 Identities=15% Similarity=0.199 Sum_probs=80.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC--CCCCCCcccCCChhHHHHHHHHHHHhCCCCcEE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV--SITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s--~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~ 236 (405)
..-+||+-||-+++.++..+...+..++.+||.|+.++++-...- ....|..-.......-...+..++......|++
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 345788889998888888999999999999999999998643211 111111111111233445555566666667999
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+-|+||||-++...+.+-.. .|++++|++-|+..
T Consensus 93 ~GGkSmGGR~aSmvade~~A--~i~~L~clgYPfhp 126 (213)
T COG3571 93 IGGKSMGGRVASMVADELQA--PIDGLVCLGYPFHP 126 (213)
T ss_pred eccccccchHHHHHHHhhcC--CcceEEEecCccCC
Confidence 99999999999999888776 59999999866554
No 98
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.04 E-value=1.1e-09 Score=96.08 Aligned_cols=235 Identities=17% Similarity=0.154 Sum_probs=115.3
Q ss_pred eEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCC-
Q 015544 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL- 200 (405)
Q Consensus 122 r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~- 200 (405)
.+.+.+.||.+|+++-..|.. ......|+||+.+|++ .....| ..++++++..||+|+.+|.--|
T Consensus 4 dhvi~~~~~~~I~vwet~P~~------------~~~~~~~tiliA~Gf~-rrmdh~-agLA~YL~~NGFhViRyDsl~Hv 69 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKN------------NEPKRNNTILIAPGFA-RRMDHF-AGLAEYLSANGFHVIRYDSLNHV 69 (294)
T ss_dssp EEEEEETTTEEEEEEEE---T------------TS---S-EEEEE-TT--GGGGGG-HHHHHHHHTTT--EEEE---B--
T ss_pred cceeEcCCCCEEEEeccCCCC------------CCcccCCeEEEecchh-HHHHHH-HHHHHHHhhCCeEEEeccccccc
Confidence 577899999999975444433 1234569999999995 456667 7899999999999999999886
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHHHHh
Q 015544 201 GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIG 280 (405)
Q Consensus 201 G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~~~~ 280 (405)
|.|++.-..+....-.+|+..+++|++ +.+..++.++..|+-|-+|...+++- . +.-+|..-+..++...
T Consensus 70 GlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i-~---lsfLitaVGVVnlr~T----- 139 (294)
T PF02273_consen 70 GLSSGDINEFTMSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI-N---LSFLITAVGVVNLRDT----- 139 (294)
T ss_dssp -----------HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHH-----
T ss_pred cCCCCChhhcchHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc-C---cceEEEEeeeeeHHHH-----
Confidence 777766443322233479999999999 45556799999999999999988854 2 5555655566665221
Q ss_pred hhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccccCCCCCHHHHHHhCCCccccCcccCcEE
Q 015544 281 RRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLL 360 (405)
Q Consensus 281 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP~L 360 (405)
..+.+. ..++......+++..+.+...-. ...|-.. +--+|+.+.+ |..+.++++.+|++
T Consensus 140 -------Le~al~---~Dyl~~~i~~lp~dldfeGh~l~--~~vFv~d--c~e~~w~~l~------ST~~~~k~l~iP~i 199 (294)
T PF02273_consen 140 -------LEKALG---YDYLQLPIEQLPEDLDFEGHNLG--AEVFVTD--CFEHGWDDLD------STINDMKRLSIPFI 199 (294)
T ss_dssp -------HHHHHS---S-GGGS-GGG--SEEEETTEEEE--HHHHHHH--HHHTT-SSHH------HHHHHHTT--S-EE
T ss_pred -------HHHHhc---cchhhcchhhCCCcccccccccc--hHHHHHH--HHHcCCccch------hHHHHHhhCCCCEE
Confidence 111110 01121111222111111100000 0001110 1123444433 23456788999999
Q ss_pred EEeeCCCCcCCCCCCCh-HHHhcCCcEEEEeeccCcccccc
Q 015544 361 CISSLDDPVCTVEAIPW-DECRSNCSIHAIVSIFTSFYVPF 400 (405)
Q Consensus 361 ii~g~dD~ivp~~~~~~-~~~~~~~~~~l~~t~~~~~~~~~ 400 (405)
..+|.+|..|-...+.. ......+...+......++.+.-
T Consensus 200 aF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~e 240 (294)
T PF02273_consen 200 AFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGE 240 (294)
T ss_dssp EEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTS
T ss_pred EEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhh
Confidence 99999999998764322 12224566777777666666553
No 99
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.00 E-value=9.5e-08 Score=86.36 Aligned_cols=227 Identities=13% Similarity=0.166 Sum_probs=136.2
Q ss_pred cceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHH-----HHHHhhCCCeEEE
Q 015544 120 YRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHL-----VFNTAKRGWNVVV 194 (405)
Q Consensus 120 ~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~-----~~~l~~~Gy~vv~ 194 (405)
.+.+.+.+.- |.++...+..+. +.+|++|-.|.++-++.+.| ..+ +..+.++ |-++-
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~~---------------~~kpaiiTyhDlglN~~scF-q~ff~~p~m~ei~~~-fcv~H 83 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDPK---------------GNKPAIITYHDLGLNHKSCF-QGFFNFPDMAEILEH-FCVYH 83 (326)
T ss_pred ceeeeecccc-ccEEEEEecCCC---------------CCCceEEEecccccchHhHh-HHhhcCHhHHHHHhh-eEEEe
Confidence 4567777776 456665553332 36888999999966555544 332 3345555 99999
Q ss_pred EeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhh
Q 015544 195 SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 195 ~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~ 274 (405)
+|.+|+-.-...-+..|.+-..+|+.+.+..+.+.+.-..++.+|.-.||+|+.++|..+|+ +|.|+|+|++-.....
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~~a~g 161 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDPCAKG 161 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh--heeEEEEEecCCCCch
Confidence 99999753322223333333456676666666666666679999999999999999999999 9999999998666543
Q ss_pred hHHHHhhhhHH-HHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccccCCCCCHHHHHHhCCCcccc-
Q 015544 275 GDRFIGRRLIQ-KIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYV- 352 (405)
Q Consensus 275 ~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l- 352 (405)
-.+|...++.. .++..-++...+.++..|.-.-..... +..-+.++.+.+... .+-.++..|+.....+..|
T Consensus 162 wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~-----~~diVq~Yr~~l~~~-~N~~Nl~~fl~ayn~R~DL~ 235 (326)
T KOG2931|consen 162 WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN-----NSDIVQEYRQHLGER-LNPKNLALFLNAYNGRRDLS 235 (326)
T ss_pred HHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc-----cHHHHHHHHHHHHhc-CChhHHHHHHHHhcCCCCcc
Confidence 33333333322 233334556666666554311110011 111122333332222 2334555555554333222
Q ss_pred -------CcccCcEEEEeeCCCCcCCC
Q 015544 353 -------GNVSIPLLCISSLDDPVCTV 372 (405)
Q Consensus 353 -------~~I~vP~Lii~g~dD~ivp~ 372 (405)
..++||+|++.|+.-|.+..
T Consensus 236 ~~r~~~~~tlkc~vllvvGd~Sp~~~~ 262 (326)
T KOG2931|consen 236 IERPKLGTTLKCPVLLVVGDNSPHVSA 262 (326)
T ss_pred ccCCCcCccccccEEEEecCCCchhhh
Confidence 14579999999999987754
No 100
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.00 E-value=6e-09 Score=97.57 Aligned_cols=114 Identities=19% Similarity=0.191 Sum_probs=80.5
Q ss_pred CCCcEEEEeCCCCCCCcc---------HHHHHHHH---HHhhCCCeEEEEeCCCCC-CCCCCCC-----CcccCCC----
Q 015544 158 DTTPIAIVIPGLTSDSAA---------SYIRHLVF---NTAKRGWNVVVSNHRGLG-GVSITSD-----CFYNAGW---- 215 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~---------~y~~~~~~---~l~~~Gy~vv~~d~rG~G-~s~~~~~-----~~~~~~~---- 215 (405)
+...+|+++||++|+++. .||..++- .+-...|-||+.|..|.+ +|..+.. +.|...+
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 455689999999996542 14455543 233446999999999943 5543321 1122222
Q ss_pred hhHHHHHHHHHHHhCCCCcEE-EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChh
Q 015544 216 TEDAREVIGYLHHEYPKAPLF-AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 216 ~~Dl~~~l~~l~~~~~~~~i~-lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
.+|...+-+.+.+..+.+++. +||.||||+.++.++..+|+ +|..++.++++....
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~~~r~s 185 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIATAARLS 185 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecccccCC
Confidence 256666667777888877877 99999999999999999999 899999998866543
No 101
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.99 E-value=4e-09 Score=90.92 Aligned_cols=88 Identities=16% Similarity=0.226 Sum_probs=61.3
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC--CCCcEEEEEE
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGT 240 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvG~ 240 (405)
|+++||++|+....|...+.+.+... ++|-..|+ . .-|+.+.++.+.+.. ...+.++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~--------~---------~P~~~~W~~~l~~~i~~~~~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW--------D---------NPDLDEWVQALDQAIDAIDEPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC----------T---------S--HHHHHHHHHHCCHC-TTTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc--------C---------CCCHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 68999999988888878888888876 77776665 1 124556666665543 2457999999
Q ss_pred cHHHHHHHHHHh-hcCCCCCceEEEEEcCCC
Q 015544 241 SIGANILVKYLG-EEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 241 S~GG~ia~~yl~-~~~~~~~v~~~v~i~~~~ 270 (405)
|+|+..+++|++ .... +|.|+++|+++.
T Consensus 63 SLGc~~~l~~l~~~~~~--~v~g~lLVAp~~ 91 (171)
T PF06821_consen 63 SLGCLTALRWLAEQSQK--KVAGALLVAPFD 91 (171)
T ss_dssp THHHHHHHHHHHHTCCS--SEEEEEEES--S
T ss_pred CHHHHHHHHHHhhcccc--cccEEEEEcCCC
Confidence 999999999995 3444 899999998763
No 102
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.99 E-value=7.1e-09 Score=93.30 Aligned_cols=110 Identities=20% Similarity=0.158 Sum_probs=58.4
Q ss_pred CCCCCcEEEEeCCCCCCCccHHHHHHHH-HHhhCCCeEEEEeCCC------CCCC--CCCCCCcccCC---ChhH-----
Q 015544 156 KDDTTPIAIVIPGLTSDSAASYIRHLVF-NTAKRGWNVVVSNHRG------LGGV--SITSDCFYNAG---WTED----- 218 (405)
Q Consensus 156 ~~~~~P~VvllHG~~g~s~~~y~~~~~~-~l~~~Gy~vv~~d~rG------~G~s--~~~~~~~~~~~---~~~D----- 218 (405)
.++..|+||++||++ ++...+ ..+.. .......+++.++-+- .|.. ..-........ ..++
T Consensus 10 ~~~~~~lvi~LHG~G-~~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 10 KGKAKPLVILLHGYG-DSEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp SST-SEEEEEE--TT-S-HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCCceEEEEECCCC-CCcchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 456789999999994 444333 33333 2223467788776652 1210 00000000000 1222
Q ss_pred --HHHHHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 219 --AREVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 219 --l~~~l~~l~~~-~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
+.++++...+. .+..++++.|+|+||++++.++.+++. ++.++|++++.
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~ 139 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGY 139 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES--
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeecc
Confidence 33334433322 356789999999999999999999998 89999999864
No 103
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.96 E-value=2e-08 Score=95.57 Aligned_cols=130 Identities=16% Similarity=0.079 Sum_probs=90.8
Q ss_pred EcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCC--CCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC
Q 015544 126 RLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (405)
Q Consensus 126 ~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~--g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s 203 (405)
...++..+.++++.|.. ......|+||++||.+ .++.+.....+...+...|+.|+++|+|=..
T Consensus 57 ~~~~~~~~~~~~y~p~~------------~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP-- 122 (312)
T COG0657 57 AGPSGDGVPVRVYRPDR------------KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP-- 122 (312)
T ss_pred cCCCCCceeEEEECCCC------------CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC--
Confidence 44566667789988721 1245789999999932 1222323234445556689999999999533
Q ss_pred CCCCCCcccCCChhHHHHHHHHHHHhC-----CCCcEEEEEEcHHHHHHHHHHhhcCCC--CCceEEEEEcCCCChhh
Q 015544 204 SITSDCFYNAGWTEDAREVIGYLHHEY-----PKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDLLI 274 (405)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~l~~l~~~~-----~~~~i~lvG~S~GG~ia~~yl~~~~~~--~~v~~~v~i~~~~~~~~ 274 (405)
........+|+.+++.++.++. ..++|.++|+|.||++++.++....++ ....+.+++++..|...
T Consensus 123 -----e~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 123 -----EHPFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred -----CCCCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 2222345689999999998763 256899999999999999887665432 35789999998877753
No 104
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.96 E-value=2.9e-09 Score=100.61 Aligned_cols=129 Identities=15% Similarity=0.141 Sum_probs=73.9
Q ss_pred EEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHH-----------------HHHHHHHHh
Q 015544 124 LFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY-----------------IRHLVFNTA 186 (405)
Q Consensus 124 ~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y-----------------~~~~~~~l~ 186 (405)
.|.+.++..+....+.|.. .....|.||.+||=+++ .+.. -..++.+|+
T Consensus 92 ~f~~~p~~~vpaylLvPd~-------------~~~p~PAVL~lHgHg~~-Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA 157 (390)
T PF12715_consen 92 EFNTTPGSRVPAYLLVPDG-------------AKGPFPAVLCLHGHGGG-KEKMAGEDGVSPDLKDDYDDPKQDYGDQLA 157 (390)
T ss_dssp EE--STTB-EEEEEEEETT---------------S-EEEEEEE--TT---HHHHCT---SSGCG--STTSTTT-HHHHHH
T ss_pred EEEccCCeeEEEEEEecCC-------------CCCCCCEEEEeCCCCCC-cccccCCcccccccchhhccccccHHHHHH
Confidence 3445566666665555543 14577999999995432 2110 124678899
Q ss_pred hCCCeEEEEeCCCCCCCCCCCCCc--------------ccCCCh------hHHHHHHHHHHHhC--CCCcEEEEEEcHHH
Q 015544 187 KRGWNVVVSNHRGLGGVSITSDCF--------------YNAGWT------EDAREVIGYLHHEY--PKAPLFAIGTSIGA 244 (405)
Q Consensus 187 ~~Gy~vv~~d~rG~G~s~~~~~~~--------------~~~~~~------~Dl~~~l~~l~~~~--~~~~i~lvG~S~GG 244 (405)
++||-|+++|.+|.|......... ...|++ .|...+++++..+- ..++|.++|+||||
T Consensus 158 k~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg 237 (390)
T PF12715_consen 158 KRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGG 237 (390)
T ss_dssp TTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGH
T ss_pred hCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccH
Confidence 999999999999999653321100 011222 35566889987653 25689999999999
Q ss_pred HHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 245 NILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 245 ~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
..++.+++.... |+++|..+-.
T Consensus 238 ~~a~~LaALDdR---Ika~v~~~~l 259 (390)
T PF12715_consen 238 YRAWWLAALDDR---IKATVANGYL 259 (390)
T ss_dssp HHHHHHHHH-TT-----EEEEES-B
T ss_pred HHHHHHHHcchh---hHhHhhhhhh
Confidence 999887777654 9988877643
No 105
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.87 E-value=1.4e-07 Score=87.55 Aligned_cols=107 Identities=19% Similarity=0.307 Sum_probs=78.3
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhC---CCeEEEEeCCCCCCCCCC-----CCCcccCCChhHHHHHHHHH---HH
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKR---GWNVVVSNHRGLGGVSIT-----SDCFYNAGWTEDAREVIGYL---HH 228 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~---Gy~vv~~d~rG~G~s~~~-----~~~~~~~~~~~Dl~~~l~~l---~~ 228 (405)
++.+++++|-+| -.+.| ..+.+.+.++ .|.|++..+.||..++.. ..+.| +..+.+...++.+ ..
T Consensus 2 ~~li~~IPGNPG-lv~fY-~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~--sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPG-LVEFY-EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLF--SLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCC-hHHHH-HHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCcc--CHHHHHHHHHHHHHHHhh
Confidence 468999999887 34555 8888888754 799999999999876554 12222 2234444444444 33
Q ss_pred hC--CCCcEEEEEEcHHHHHHHHHHhhcC-CCCCceEEEEEcCCC
Q 015544 229 EY--PKAPLFAIGTSIGANILVKYLGEEG-EKTPVAGAAAICSPW 270 (405)
Q Consensus 229 ~~--~~~~i~lvG~S~GG~ia~~yl~~~~-~~~~v~~~v~i~~~~ 270 (405)
++ +..+++++|||+|+.++++.+.+.+ ...+|.+++++.|..
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 33 5778999999999999999999988 333799999999854
No 106
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.82 E-value=5.7e-08 Score=102.19 Aligned_cols=182 Identities=19% Similarity=0.192 Sum_probs=118.9
Q ss_pred CCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCcc---HHHHHHHH-HHhhCCCeEEEEeCCCCCCCC
Q 015544 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA---SYIRHLVF-NTAKRGWNVVVSNHRGLGGVS 204 (405)
Q Consensus 129 dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~---~y~~~~~~-~l~~~Gy~vv~~d~rG~G~s~ 204 (405)
||.+..+.-..|+.-+ ....-|+++.+||..+ |.. .+...+.. .+...|+.|+.+|.||.|+..
T Consensus 506 ~~~~~~~~~~lP~~~~-----------~~~kyPllv~~yGGP~-sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G 573 (755)
T KOG2100|consen 506 DGITANAILILPPNFD-----------PSKKYPLLVVVYGGPG-SQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYG 573 (755)
T ss_pred ccEEEEEEEecCCCCC-----------CCCCCCEEEEecCCCC-cceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcc
Confidence 7877777767676532 2347799999999775 211 11122333 355689999999999988654
Q ss_pred CCCC----CcccCCChhHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHHH
Q 015544 205 ITSD----CFYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRF 278 (405)
Q Consensus 205 ~~~~----~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~~ 278 (405)
..-. +.......+|...+++++.+.. ...++.+.|+|.||.++++.++..+.. -++|+++++|..|..
T Consensus 574 ~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-~fkcgvavaPVtd~~----- 647 (755)
T KOG2100|consen 574 WDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGD-VFKCGVAVAPVTDWL----- 647 (755)
T ss_pred hhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCc-eEEEEEEecceeeee-----
Confidence 3211 1111224578888888887654 356899999999999999999998742 578889999988762
Q ss_pred HhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccccCCCCCH-HHHHHhCCCccccCcccC
Q 015544 279 IGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETV-DTYYRNCSSSTYVGNVSI 357 (405)
Q Consensus 279 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~-~~yy~~~s~~~~l~~I~v 357 (405)
+++...+.. ..|..+. ..-|...+....+.+++.
T Consensus 648 --------~yds~~ter-------------------------------------ymg~p~~~~~~y~e~~~~~~~~~~~~ 682 (755)
T KOG2100|consen 648 --------YYDSTYTER-------------------------------------YMGLPSENDKGYEESSVSSPANNIKT 682 (755)
T ss_pred --------eecccccHh-------------------------------------hcCCCccccchhhhccccchhhhhcc
Confidence 111110000 0011100 011555666677788877
Q ss_pred cE-EEEeeCCCCcCCCC
Q 015544 358 PL-LCISSLDDPVCTVE 373 (405)
Q Consensus 358 P~-Lii~g~dD~ivp~~ 373 (405)
|. |+|||+.|.-|+.+
T Consensus 683 ~~~LliHGt~DdnVh~q 699 (755)
T KOG2100|consen 683 PKLLLIHGTEDDNVHFQ 699 (755)
T ss_pred CCEEEEEcCCcCCcCHH
Confidence 77 99999999999876
No 107
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.81 E-value=4.6e-08 Score=88.63 Aligned_cols=105 Identities=20% Similarity=0.264 Sum_probs=80.4
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC----C-
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----P- 231 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~----~- 231 (405)
..+-|+|||+||+. ...++| ..+.++++.+||-||.+|+...+... .....+++.++++|+.+.. +
T Consensus 14 ~g~yPVv~f~~G~~-~~~s~Y-s~ll~hvAShGyIVV~~d~~~~~~~~-------~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 14 AGTYPVVLFLHGFL-LINSWY-SQLLEHVASHGYIVVAPDLYSIGGPD-------DTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CCCcCEEEEeCCcC-CCHHHH-HHHHHHHHhCceEEEEecccccCCCC-------cchhHHHHHHHHHHHHhcchhhccc
Confidence 45789999999986 556666 89999999999999999977644311 1134577888888876532 1
Q ss_pred -----CCcEEEEEEcHHHHHHHHHHhhcCC---CCCceEEEEEcCCC
Q 015544 232 -----KAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPW 270 (405)
Q Consensus 232 -----~~~i~lvG~S~GG~ia~~yl~~~~~---~~~v~~~v~i~~~~ 270 (405)
-+++.+.|||-||-++...+....+ ..+++++++++|.-
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 2489999999999999988877632 23799999998754
No 108
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.80 E-value=1.3e-07 Score=88.60 Aligned_cols=108 Identities=19% Similarity=0.214 Sum_probs=79.8
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHH-HHHHhhCCCeEEEEeCCCCCCCCCCCCC---------cccC--CChhHHHHHHHH
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHL-VFNTAKRGWNVVVSNHRGLGGVSITSDC---------FYNA--GWTEDAREVIGY 225 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~-~~~l~~~Gy~vv~~d~rG~G~s~~~~~~---------~~~~--~~~~Dl~~~l~~ 225 (405)
+.+|++|.++|. |+..-+.-+.+ +..|.++|+..+.+..+=+|.-...... .+.. ....+.+.+++|
T Consensus 90 ~~rp~~IhLagT-GDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGT-GDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCC-CccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 568999999996 55444443445 7888888999999999999865432111 1111 123578888999
Q ss_pred HHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 226 LHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 226 l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
++.+ +..++.+.|.||||.+|...++..|. ++..+-++++.
T Consensus 169 l~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~~ 209 (348)
T PF09752_consen 169 LERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSWS 209 (348)
T ss_pred HHhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeeccc
Confidence 9888 66799999999999999988888888 67666666653
No 109
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.80 E-value=4.8e-08 Score=88.17 Aligned_cols=109 Identities=15% Similarity=0.135 Sum_probs=73.9
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHh--------hCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC-
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTA--------KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY- 230 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~--------~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~- 230 (405)
+.+|||+||..|+.. .+ +.+...+. ...++++..|+...... .. .... ....+-+.+.++.+.+.+
T Consensus 4 g~pVlFIhG~~Gs~~-q~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~-g~~l-~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYK-QV-RSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH-GRTL-QRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCCCCHh-HH-HHHHHHHhhhhhhccCccceeEEEeccCccccc-cc-cccH-HHHHHHHHHHHHHHHHhhh
Confidence 456889999877543 33 66665552 12588999998763211 11 1111 123456777888887777
Q ss_pred ----CCCcEEEEEEcHHHHHHHHHHhhcCCC-CCceEEEEEcCCCChh
Q 015544 231 ----PKAPLFAIGTSIGANILVKYLGEEGEK-TPVAGAAAICSPWDLL 273 (405)
Q Consensus 231 ----~~~~i~lvG~S~GG~ia~~yl~~~~~~-~~v~~~v~i~~~~~~~ 273 (405)
+..++++|||||||.++-.++...... ..++.+|.+++|....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 678999999999999988877654422 2699999999987653
No 110
>COG0400 Predicted esterase [General function prediction only]
Probab=98.79 E-value=1e-07 Score=84.24 Aligned_cols=106 Identities=25% Similarity=0.250 Sum_probs=64.2
Q ss_pred CCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCc--------ccC-C---ChhHHHHHH
Q 015544 156 KDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCF--------YNA-G---WTEDAREVI 223 (405)
Q Consensus 156 ~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~--------~~~-~---~~~Dl~~~l 223 (405)
.++..|+||++||++|+ ...+ -........+ +.++ ..||-=. .....++ +.. + .++.+.+.+
T Consensus 14 ~~p~~~~iilLHG~Ggd-e~~~-~~~~~~~~P~-~~~i--s~rG~v~-~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 14 GDPAAPLLILLHGLGGD-ELDL-VPLPELILPN-ATLV--SPRGPVA-ENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCCcEEEEEecCCCC-hhhh-hhhhhhcCCC-CeEE--cCCCCcc-ccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 45778899999999754 3333 2344444432 3443 4444111 0011111 110 0 112444555
Q ss_pred HHHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 224 GYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 224 ~~l~~~~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
+.+.++++ .++++++|+|.||++++.....++. .++++++.++.
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g~ 133 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSGM 133 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCCc
Confidence 55555664 4799999999999999999999988 79999987653
No 111
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.79 E-value=2.9e-08 Score=86.29 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=72.7
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC-CCCCCCCCCC--C------cccCCChhHHHHHHHHHHHhCC
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR-GLGGVSITSD--C------FYNAGWTEDAREVIGYLHHEYP 231 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r-G~G~s~~~~~--~------~~~~~~~~Dl~~~l~~l~~~~~ 231 (405)
.+||++--+.|.+... .+..++.++..||.|+++|+- |=.-++.... + .....-..|+..++++++.+++
T Consensus 40 ~~li~i~DvfG~~~~n-~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPN-TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeeeccccHH-HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 4677777666654443 488999999999999999984 4222221111 0 1111223699999999998888
Q ss_pred CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEE
Q 015544 232 KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAI 266 (405)
Q Consensus 232 ~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i 266 (405)
..+|.++|+.|||-++..+....++ +.++|+.
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~~---f~a~v~~ 150 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDPE---FDAGVSF 150 (242)
T ss_pred cceeeEEEEeecceEEEEeeccchh---heeeeEe
Confidence 8899999999999998877777665 6666655
No 112
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.77 E-value=1.4e-08 Score=90.88 Aligned_cols=102 Identities=21% Similarity=0.186 Sum_probs=70.9
Q ss_pred EEEeCCCC--CCCccHHHHHHHHHHhh-CCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHh-----CCCCc
Q 015544 163 AIVIPGLT--SDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE-----YPKAP 234 (405)
Q Consensus 163 VvllHG~~--g~s~~~y~~~~~~~l~~-~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~-----~~~~~ 234 (405)
||++||.+ .++.+.. ..++..+++ .|+.|+++|+|=....+ .....+|+.++++++.+. +..++
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p~~~-------~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAPEAP-------FPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TTTSS-------TTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeecccccccc-------ccccccccccceeeeccccccccccccc
Confidence 68999942 1222333 556666664 89999999999432211 123468999999999887 56679
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCC--CCceEEEEEcCCCCh
Q 015544 235 LFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDL 272 (405)
Q Consensus 235 i~lvG~S~GG~ia~~yl~~~~~~--~~v~~~v~i~~~~~~ 272 (405)
++++|+|.||++++.++....+. ..++++++++|..|+
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999988754432 259999999998766
No 113
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.77 E-value=2.1e-07 Score=85.17 Aligned_cols=225 Identities=12% Similarity=0.153 Sum_probs=104.1
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHH-----HHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHL-----VFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK 232 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~-----~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~ 232 (405)
.++|++|-.|-++-++.+.| ..+ ...+. +.|-++=+|.||+..-...-+..|.+-..+++.+.+..+.+.+.-
T Consensus 21 ~~kp~ilT~HDvGlNh~scF-~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~l 98 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCF-QGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGL 98 (283)
T ss_dssp TTS-EEEEE--TT--HHHHC-HHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT-
T ss_pred CCCceEEEeccccccchHHH-HHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCc
Confidence 36999999999854433323 222 22233 469999999999865433333333333345555555555555555
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhhHHHHhhhhHH-HHHHHHHHHhHHHHHHhhcccccccC
Q 015544 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIGDRFIGRRLIQ-KIYDRALTIGLQDYAQLHEPRYSRLA 311 (405)
Q Consensus 233 ~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~ 311 (405)
..++.+|--.||+|+.+||..+|+ ++.|+|+|++......-.++...++.. .++...++..++++...|. |
T Consensus 99 k~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~--F---- 170 (283)
T PF03096_consen 99 KSVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHY--F---- 170 (283)
T ss_dssp --EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHH--S----
T ss_pred cEEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcc--c----
Confidence 579999999999999999999999 899999999866653333333222211 1111123333444443332 1
Q ss_pred CHHHHhc-CCCHHHHhhhcccccCCCCCHHHHHHh----CCCccccCcccCcEEEEeeCCCCcCCCCCCChHHHhcCCcE
Q 015544 312 NWEGIKK-SRSIRDFDSHATCLVGKFETVDTYYRN----CSSSTYVGNVSIPLLCISSLDDPVCTVEAIPWDECRSNCSI 386 (405)
Q Consensus 312 ~~~~~~~-~~~~~~fd~~~~~~~~g~~~~~~yy~~----~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~ 386 (405)
..+.... ...+..+.+.+.... +-.++..|++. .+.....+...+|+|++.|++.|....- ..........+.
T Consensus 171 g~~~~~~n~Dlv~~yr~~l~~~~-Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~v-v~~ns~Ldp~~t 248 (283)
T PF03096_consen 171 GKEEEENNSDLVQTYRQHLDERI-NPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDV-VEMNSKLDPTKT 248 (283)
T ss_dssp -HHHHHCT-HHHHHHHHHHHT-T-THHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHH-HHHHHHS-CCCE
T ss_pred ccccccccHHHHHHHHHHHhcCC-CHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhH-HHHHhhcCcccc
Confidence 1111111 111112222221111 11123333333 2333345667899999999999876532 222222233355
Q ss_pred EEEeeccC
Q 015544 387 HAIVSIFT 394 (405)
Q Consensus 387 ~l~~t~~~ 394 (405)
.++....+
T Consensus 249 tllkv~dc 256 (283)
T PF03096_consen 249 TLLKVADC 256 (283)
T ss_dssp EEEEETT-
T ss_pred eEEEeccc
Confidence 55554444
No 114
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.75 E-value=1.2e-07 Score=84.65 Aligned_cols=109 Identities=15% Similarity=0.182 Sum_probs=73.4
Q ss_pred CCCcEEEEeCCCCCCCccHHHH--HHHHHHhhCCCeEEEEeCCCCCCCCCC-----CCCcccCCChhHHHHHHHHHHHhC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSIT-----SDCFYNAGWTEDAREVIGYLHHEY 230 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~--~~~~~l~~~Gy~vv~~d~rG~G~s~~~-----~~~~~~~~~~~Dl~~~l~~l~~~~ 230 (405)
...|+||++||.+++ .+.+.. .+.....++||-|+.++.......... .......+....+.++++++..++
T Consensus 14 ~~~PLVv~LHG~~~~-a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQS-AEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCCCEEEEeCCCCCC-HHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 357999999998654 333322 123334457999999985422111100 000111234456888999999888
Q ss_pred C--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 231 P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 231 ~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
+ .++|++.|+|.||+++..++..+|+ .+.++..+++.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG~ 131 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSGV 131 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeeccc
Confidence 6 5689999999999999999999999 78877776653
No 115
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.74 E-value=5.3e-08 Score=94.35 Aligned_cols=108 Identities=14% Similarity=0.166 Sum_probs=74.8
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
.|.||++.-+.|. .....+++++.+.+ |+.|++.|+.--+..+....++.-.++.+-+.++++++ +. ++.++|
T Consensus 102 ~~pvLiV~Pl~g~-~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~-~v~l~G 174 (406)
T TIGR01849 102 GPAVLIVAPMSGH-YATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GP-DIHVIA 174 (406)
T ss_pred CCcEEEEcCCchH-HHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CC-CCcEEE
Confidence 3678899988753 44456899999999 99999999987665543333322222222333333333 33 399999
Q ss_pred EcHHHHHHHHHHhhcCC---CCCceEEEEEcCCCChhh
Q 015544 240 TSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~~---~~~v~~~v~i~~~~~~~~ 274 (405)
+|+||..++.+++...+ +.+++.++++++|.|...
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 99999998877765422 226999999999999765
No 116
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.73 E-value=3.2e-07 Score=80.02 Aligned_cols=90 Identities=17% Similarity=0.147 Sum_probs=63.1
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCC--CeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEE
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRG--WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~G--y~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~ 240 (405)
++.+||+.++..+.-.+.+.+.+.+.| ..+.++|++- ..++..+.++.+.++.....+.++|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 789999987766655566677777765 3455555431 23455555555555555556999999
Q ss_pred cHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 241 SIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 241 S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
||||..|..++.+++- ++ |+++|....
T Consensus 67 SlGG~~A~~La~~~~~----~a-vLiNPav~p 93 (187)
T PF05728_consen 67 SLGGFYATYLAERYGL----PA-VLINPAVRP 93 (187)
T ss_pred ChHHHHHHHHHHHhCC----CE-EEEcCCCCH
Confidence 9999999988877754 33 889988776
No 117
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.71 E-value=2.4e-07 Score=87.11 Aligned_cols=97 Identities=21% Similarity=0.273 Sum_probs=73.4
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC--CCCCCCCCCCc--cc----CCChhHHHHHHHHHHHh
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG--LGGVSITSDCF--YN----AGWTEDAREVIGYLHHE 229 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG--~G~s~~~~~~~--~~----~~~~~Dl~~~l~~l~~~ 229 (405)
...|+|++-||.++ +...+ ..+++.+++.||-|.+++++| .|+.+...... +. .+...|+..+++++.+.
T Consensus 69 ~~~PlvvlshG~Gs-~~~~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~ 146 (365)
T COG4188 69 YLLPLVVLSHGSGS-YVTGF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL 146 (365)
T ss_pred CcCCeEEecCCCCC-Cccch-hhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh
Confidence 47899999999854 45555 778999999999999999999 45544321110 11 23457999999998876
Q ss_pred --CC-------CCcEEEEEEcHHHHHHHHHHhhcCC
Q 015544 230 --YP-------KAPLFAIGTSIGANILVKYLGEEGE 256 (405)
Q Consensus 230 --~~-------~~~i~lvG~S~GG~ia~~yl~~~~~ 256 (405)
-| ..+|.++|||+||..++..++.+.+
T Consensus 147 ~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 147 TASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 12 3579999999999999998887655
No 118
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.68 E-value=1.2e-07 Score=93.55 Aligned_cols=141 Identities=19% Similarity=0.144 Sum_probs=94.3
Q ss_pred CCCCCCcce-EEE--EcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCC-----C--ccHHHHHHHH
Q 015544 114 RPPCFSYRR-QLF--RLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSD-----S--AASYIRHLVF 183 (405)
Q Consensus 114 ~~~~~~~~r-~~~--~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~-----s--~~~y~~~~~~ 183 (405)
..+++.|.. ++| +++.|.++....+.|.... ...+-|+|+.+-|..+- + .-.|+| ..
T Consensus 604 ~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~-----------pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~ 670 (867)
T KOG2281|consen 604 APPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQ-----------PGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FC 670 (867)
T ss_pred CCCCCccCChhheeeecCCCcEEEEEEEccccCC-----------CCCCCceEEEEcCCCceEEeeccccceehhh--hh
Confidence 344555544 555 6656666666666665421 23458999999996541 1 112322 34
Q ss_pred HHhhCCCeEEEEeCCCCCCCCCCCCC--cccCCC--hhHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhcCC
Q 015544 184 NTAKRGWNVVVSNHRGLGGVSITSDC--FYNAGW--TEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEEGE 256 (405)
Q Consensus 184 ~l~~~Gy~vv~~d~rG~G~s~~~~~~--~~~~~~--~~Dl~~~l~~l~~~~~---~~~i~lvG~S~GG~ia~~yl~~~~~ 256 (405)
.|+..||-|+++|.||...-...-.. -...|. .+|-.+.++++.++++ -+++.+.|+|.||.+++..+..+|+
T Consensus 671 ~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 671 RLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred hhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc
Confidence 57788999999999995433222111 122333 3688899999999874 4689999999999999999999998
Q ss_pred CCCceEEEEEcCC
Q 015544 257 KTPVAGAAAICSP 269 (405)
Q Consensus 257 ~~~v~~~v~i~~~ 269 (405)
-+++||+-+|.
T Consensus 751 --IfrvAIAGapV 761 (867)
T KOG2281|consen 751 --IFRVAIAGAPV 761 (867)
T ss_pred --eeeEEeccCcc
Confidence 56777765543
No 119
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.65 E-value=2e-06 Score=79.95 Aligned_cols=107 Identities=19% Similarity=0.174 Sum_probs=72.1
Q ss_pred CCCcEEEEeCCCCCCCccHHH-----HHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC--
Q 015544 158 DTTPIAIVIPGLTSDSAASYI-----RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-- 230 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~-----~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~-- 230 (405)
.....||++-|-++.-+..++ ..+.+.+.+.|-+|+++|+||.|.|.+... ..+...|..++++|++++.
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s---~~dLv~~~~a~v~yL~d~~~G 211 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPS---RKDLVKDYQACVRYLRDEEQG 211 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCC---HHHHHHHHHHHHHHHHhcccC
Confidence 345678899886443333222 123333445689999999999999976643 2456789999999998643
Q ss_pred C-CCcEEEEEEcHHHHHHHHHHhhcCCCC--CceEEEEEc
Q 015544 231 P-KAPLFAIGTSIGANILVKYLGEEGEKT--PVAGAAAIC 267 (405)
Q Consensus 231 ~-~~~i~lvG~S~GG~ia~~yl~~~~~~~--~v~~~v~i~ 267 (405)
+ ...|.+.|||+||.++...+..+..+. .++=.++-+
T Consensus 212 ~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikD 251 (365)
T PF05677_consen 212 PKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKD 251 (365)
T ss_pred CChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEec
Confidence 2 357999999999999887666553321 355444443
No 120
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.63 E-value=2.2e-07 Score=91.62 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=77.9
Q ss_pred ccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh
Q 015544 174 AASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 174 ~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
...|+..+++.|.+.||.+ ..|++|+|..-..+... ....+++.+.++.+.+.++..+++++||||||.++..++..
T Consensus 106 ~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~--~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRL--PETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccH--HHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 3456689999999999865 78999999765432211 22457899999999888888899999999999999999988
Q ss_pred cCCC--CCceEEEEEcCCCChhh
Q 015544 254 EGEK--TPVAGAAAICSPWDLLI 274 (405)
Q Consensus 254 ~~~~--~~v~~~v~i~~~~~~~~ 274 (405)
+++. ..|+..|++++|++-..
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCCc
Confidence 7652 25899999999987643
No 121
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.61 E-value=1.7e-07 Score=85.73 Aligned_cols=113 Identities=22% Similarity=0.389 Sum_probs=71.9
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHh-hCCC--e--EEEEeCCCC----CCCCCC--CCC---cccC-------CCh
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTA-KRGW--N--VVVSNHRGL----GGVSIT--SDC---FYNA-------GWT 216 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~-~~Gy--~--vv~~d~rG~----G~s~~~--~~~---~~~~-------~~~ 216 (405)
...| .||+||+.|+..+ + ..++..+. ++|. . ++-++.-|. |.-... .|- .|.. ..+
T Consensus 10 ~~tP-TifihG~~gt~~s-~-~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa 86 (255)
T PF06028_consen 10 STTP-TIFIHGYGGTANS-F-NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQA 86 (255)
T ss_dssp S-EE-EEEE--TTGGCCC-C-HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHH
T ss_pred CCCc-EEEECCCCCChhH-H-HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHH
Confidence 3455 5599999775444 4 78999997 6664 3 344444442 221111 111 1111 123
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCC---CceEEEEEcCCCChh
Q 015544 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT---PVAGAAAICSPWDLL 273 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~---~v~~~v~i~~~~~~~ 273 (405)
.-+..++.+++++|.-.++-+|||||||..++.|+..++.+. .+...|.|++|++..
T Consensus 87 ~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 578899999999999999999999999999999999876543 589999999999874
No 122
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.59 E-value=2.7e-08 Score=88.66 Aligned_cols=89 Identities=13% Similarity=0.179 Sum_probs=57.1
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCe---EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWN---VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~---vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
|||+||..++....| ..+++.|.++||. ++++++-...................+++++|+.+++.-+. ++-+||
T Consensus 4 VVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 4 VVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred EEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 779999987666666 7899999999998 79999944333111100000112336888999998877777 999999
Q ss_pred EcHHHHHHHHHHhh
Q 015544 240 TSIGANILVKYLGE 253 (405)
Q Consensus 240 ~S~GG~ia~~yl~~ 253 (405)
|||||.++-+|+.-
T Consensus 82 HS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 82 HSMGGTIARYYIKG 95 (219)
T ss_dssp ETCHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHH
Confidence 99999999888754
No 123
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.56 E-value=2.3e-06 Score=80.38 Aligned_cols=99 Identities=20% Similarity=0.163 Sum_probs=63.3
Q ss_pred HHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC------CCCcEEEEEEcHHHHHHHHH
Q 015544 177 YIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY------PKAPLFAIGTSIGANILVKY 250 (405)
Q Consensus 177 y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~------~~~~i~lvG~S~GG~ia~~y 250 (405)
+-..++..+.++||.|+++|+.|.|. +....+ ....++.+.++..++.. .+.++.++|+|.||.-++..
T Consensus 14 ~e~~~l~~~L~~GyaVv~pDY~Glg~-~y~~~~----~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~A 88 (290)
T PF03583_consen 14 YEAPFLAAWLARGYAVVAPDYEGLGT-PYLNGR----SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWA 88 (290)
T ss_pred hHHHHHHHHHHCCCEEEecCCCCCCC-cccCcH----hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHH
Confidence 33456777888999999999999987 211111 11123333344333222 25689999999999987654
Q ss_pred Hh---hcCCCCC--ceEEEEEcCCCChhhhHHHHh
Q 015544 251 LG---EEGEKTP--VAGAAAICSPWDLLIGDRFIG 280 (405)
Q Consensus 251 l~---~~~~~~~--v~~~v~i~~~~~~~~~~~~~~ 280 (405)
+. ++..+-. +.|+++.++|.|+......+.
T Consensus 89 A~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~ 123 (290)
T PF03583_consen 89 AELAPSYAPELNRDLVGAAAGGPPADLAALLRALN 123 (290)
T ss_pred HHHhHHhCcccccceeEEeccCCccCHHHHHhccC
Confidence 43 2333335 899999999998865544333
No 124
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.56 E-value=2.2e-06 Score=77.61 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=73.2
Q ss_pred CCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCC---CCC
Q 015544 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG---GVS 204 (405)
Q Consensus 128 ~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G---~s~ 204 (405)
+-|..+.+..+.|.+-. +..+--|.||++||.+-.+...+ ..+ + .|-..++.+.+-.+ .++
T Consensus 169 ~tgneLkYrly~Pkdy~----------pdkky~PLvlfLHgagq~g~dn~-~~l---~--sg~gaiawa~pedqcfVlAP 232 (387)
T COG4099 169 STGNELKYRLYTPKDYA----------PDKKYYPLVLFLHGAGQGGSDND-KVL---S--SGIGAIAWAGPEDQCFVLAP 232 (387)
T ss_pred ccCceeeEEEecccccC----------CCCccccEEEEEecCCCCCchhh-hhh---h--cCccceeeecccCceEEEcc
Confidence 45777777777775421 12233499999999754444433 211 1 13334444444333 011
Q ss_pred CCCCCccc------CCChhHHHHHHH-HHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 205 ITSDCFYN------AGWTEDAREVIG-YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 205 ~~~~~~~~------~~~~~Dl~~~l~-~l~~~~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
.-.+ .+. .........+++ .+..+|. .++|+++|.|+||.-++.++.++|+ .+.+++.+|+.++
T Consensus 233 Qy~~-if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d 305 (387)
T COG4099 233 QYNP-IFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGD 305 (387)
T ss_pred cccc-cccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCc
Confidence 1001 111 011122223333 4445553 5689999999999999999999999 8999999998766
No 125
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.56 E-value=5e-07 Score=81.76 Aligned_cols=103 Identities=21% Similarity=0.147 Sum_probs=74.8
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEc
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S 241 (405)
+|+++||.+| +...| ..+++.+...++.|+.++.+|.+..... .....+=+...++.|+...|..|+.++|||
T Consensus 2 ~lf~~p~~gG-~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~~~-----~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 2 PLFCFPPAGG-SASSY-RPLARALPDDVIGVYGIEYPGRGDDEPP-----PDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp EEEEESSTTC-SGGGG-HHHHHHHTTTEEEEEEECSTTSCTTSHE-----ESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred eEEEEcCCcc-CHHHH-HHHHHhCCCCeEEEEEEecCCCCCCCCC-----CCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 5889999876 56667 8899988875689999999998722111 111122344566777887888899999999
Q ss_pred HHHHHHHHHHhhcCC-CCCceEEEEEcCCCC
Q 015544 242 IGANILVKYLGEEGE-KTPVAGAAAICSPWD 271 (405)
Q Consensus 242 ~GG~ia~~yl~~~~~-~~~v~~~v~i~~~~~ 271 (405)
+||.+|...|.+-.+ +..+..+++++++..
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999988765322 226999999996443
No 126
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.55 E-value=3.8e-07 Score=76.71 Aligned_cols=92 Identities=12% Similarity=0.224 Sum_probs=56.4
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEE
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~ 240 (405)
+.+|++||+.|++...|.......+.. +-.+++.. ...+. ...|.+-+ -+.+... ..++++|+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~~-----w~~P~--~~dWi~~l---~~~v~a~--~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQDD-----WEAPV--LDDWIARL---EKEVNAA--EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccCC-----CCCCC--HHHHHHHH---HHHHhcc--CCCeEEEEe
Confidence 458999999987777774444333322 11111110 00010 11222222 2233332 346999999
Q ss_pred cHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 241 SIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 241 S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
|+|+.++++|+.+... +|.|+.+|+++.
T Consensus 67 SLGc~~v~h~~~~~~~--~V~GalLVAppd 94 (181)
T COG3545 67 SLGCATVAHWAEHIQR--QVAGALLVAPPD 94 (181)
T ss_pred cccHHHHHHHHHhhhh--ccceEEEecCCC
Confidence 9999999999998877 799999998864
No 127
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.54 E-value=5.5e-08 Score=92.64 Aligned_cols=110 Identities=18% Similarity=0.254 Sum_probs=67.6
Q ss_pred CCCCcEEEEeCCCCCCC-ccHHHHHHHHHHhh---CCCeEEEEeCCCCCCCCCCCCCccc--CCCh----hHHHHHHHHH
Q 015544 157 DDTTPIAIVIPGLTSDS-AASYIRHLVFNTAK---RGWNVVVSNHRGLGGVSITSDCFYN--AGWT----EDAREVIGYL 226 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s-~~~y~~~~~~~l~~---~Gy~vv~~d~rG~G~s~~~~~~~~~--~~~~----~Dl~~~l~~l 226 (405)
+.++|++|++||+.++. ...++..+.+.+.+ .+++|+++|+...... .|. ...+ +.+..+|+.|
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~------~Y~~a~~n~~~vg~~la~~l~~L 141 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN------NYPQAVANTRLVGRQLAKFLSFL 141 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc------cccchhhhHHHHHHHHHHHHHHH
Confidence 56899999999999877 56777888886654 4899999999753221 121 1112 3455666666
Q ss_pred HHh--CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 227 HHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 227 ~~~--~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
... .+.++++++|||+||.++-........+.+|..+..++|....
T Consensus 142 ~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 142 INNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred HhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 533 3567899999999999987554444333468899999885443
No 128
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.54 E-value=3.1e-07 Score=78.91 Aligned_cols=102 Identities=18% Similarity=0.123 Sum_probs=76.9
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEc
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S 241 (405)
.+|++-|=+|. ...-+.+++.|+++|+.|+.+|-+-+=-+..+ | .....|+.+++++-.++....+++++|+|
T Consensus 4 ~~v~~SGDgGw--~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rt-P----~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGW--RDLDKQIAEALAKQGVPVVGVDSLRYFWSERT-P----EQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCc--hhhhHHHHHHHHHCCCeEEEechHHHHhhhCC-H----HHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 57788885443 23447899999999999999997643222222 2 12357999999999999988999999999
Q ss_pred HHHHHHHHHHhhcCCC--CCceEEEEEcCCC
Q 015544 242 IGANILVKYLGEEGEK--TPVAGAAAICSPW 270 (405)
Q Consensus 242 ~GG~ia~~yl~~~~~~--~~v~~~v~i~~~~ 270 (405)
+|+-++-....+.|.. .+|+.++++++..
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9999887777666542 2699999998754
No 129
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.54 E-value=1.9e-06 Score=76.65 Aligned_cols=101 Identities=16% Similarity=0.122 Sum_probs=67.7
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHh----CCCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE----YPKA 233 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~----~~~~ 233 (405)
..++.++.+|=- |++.+.| +.+...+.. -+.++++.++|.|.--.. ...+|+..+++.+... ++++
T Consensus 5 ~~~~~L~cfP~A-GGsa~~f-r~W~~~lp~-~iel~avqlPGR~~r~~e-------p~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 5 GARLRLFCFPHA-GGSASLF-RSWSRRLPA-DIELLAVQLPGRGDRFGE-------PLLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCCceEEEecCC-CCCHHHH-HHHHhhCCc-hhheeeecCCCcccccCC-------cccccHHHHHHHHHHHhccccCCC
Confidence 456678888865 4456666 777776654 489999999998853222 1235566555555432 4577
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCCC-CCceEEEEEcC
Q 015544 234 PLFAIGTSIGANILVKYLGEEGEK-TPVAGAAAICS 268 (405)
Q Consensus 234 ~i~lvG~S~GG~ia~~yl~~~~~~-~~v~~~v~i~~ 268 (405)
|+.+.||||||+++...+.+.... ....+..+.+.
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~ 110 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGC 110 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecC
Confidence 999999999999999988764332 24555554443
No 130
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.52 E-value=9.4e-07 Score=80.35 Aligned_cols=125 Identities=18% Similarity=0.167 Sum_probs=89.5
Q ss_pred CCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHH--HHHh-hCCCeEEEEeC-------C
Q 015544 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLV--FNTA-KRGWNVVVSNH-------R 198 (405)
Q Consensus 129 dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~--~~l~-~~Gy~vv~~d~-------r 198 (405)
+|....+..+.|+.. +.+.|.||++||-.++ ...+ .+.. +.++ +.||-|+.+|- -
T Consensus 43 ~g~~r~y~l~vP~g~-------------~~~apLvv~LHG~~~s-gag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~ 107 (312)
T COG3509 43 NGLKRSYRLYVPPGL-------------PSGAPLVVVLHGSGGS-GAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNAN 107 (312)
T ss_pred CCCccceEEEcCCCC-------------CCCCCEEEEEecCCCC-hHHh-hcccchhhhhcccCcEEECcCccccccCCC
Confidence 556667777777662 3556999999997654 3333 4443 4444 57999999942 3
Q ss_pred CCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCC--CcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 199 G~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~--~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
|++.+..+.++.-..+...+++++++.+..+|.- .++++.|.|-||.++..++.++++ .+.++..|++..
T Consensus 108 ~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~ 179 (312)
T COG3509 108 GCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLL 179 (312)
T ss_pred cccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeeccc
Confidence 3445544444333445567889999999999974 489999999999999999999998 677777777644
No 131
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.49 E-value=3.3e-06 Score=80.17 Aligned_cols=133 Identities=12% Similarity=0.097 Sum_probs=91.3
Q ss_pred EEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCC---CCCccHHHHHHHHHHh-hCCCeEEEEeCC
Q 015544 123 QLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTA-KRGWNVVVSNHR 198 (405)
Q Consensus 123 ~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~---g~s~~~y~~~~~~~l~-~~Gy~vv~~d~r 198 (405)
..+.....+.+....+.|.... .....|+||++||.+ |+........++..++ +.+..|+.+|+|
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~-----------~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYR 132 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSS-----------SETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYR 132 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCC-----------cccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcc
Confidence 3344455556777777775521 126789999999953 2222333367777765 469999999999
Q ss_pred CCCCCCCCCCCcccCCChhHHHHHHHHHHHh------CCCCcEEEEEEcHHHHHHHHHHhhcC----CCCCceEEEEEcC
Q 015544 199 GLGGVSITSDCFYNAGWTEDAREVIGYLHHE------YPKAPLFAIGTSIGANILVKYLGEEG----EKTPVAGAAAICS 268 (405)
Q Consensus 199 G~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~------~~~~~i~lvG~S~GG~ia~~yl~~~~----~~~~v~~~v~i~~ 268 (405)
=- |........+|..+++.|+.++ -..++++++|-|.|||||...+.+.. ...+++|.|++-|
T Consensus 133 LA-------PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P 205 (336)
T KOG1515|consen 133 LA-------PEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYP 205 (336)
T ss_pred cC-------CCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEec
Confidence 43 3322223458888888888764 13457999999999999998876543 2347999999998
Q ss_pred CCChh
Q 015544 269 PWDLL 273 (405)
Q Consensus 269 ~~~~~ 273 (405)
.+...
T Consensus 206 ~~~~~ 210 (336)
T KOG1515|consen 206 FFQGT 210 (336)
T ss_pred ccCCC
Confidence 76553
No 132
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.48 E-value=4.3e-07 Score=86.40 Aligned_cols=113 Identities=18% Similarity=0.143 Sum_probs=82.5
Q ss_pred CcEEEEeCCCCCCCc---cHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEE
Q 015544 160 TPIAIVIPGLTSDSA---ASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (405)
Q Consensus 160 ~P~VvllHG~~g~s~---~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~ 236 (405)
.+.++++|-+...-. -.--+.++..+.++|..|.++++++=..+.. .+.+.....+++.++++.+++..+..+|.
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--~~~~edYi~e~l~~aid~v~~itg~~~In 184 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--AKNLEDYILEGLSEAIDTVKDITGQKDIN 184 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh--hccHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 445778888653110 0002468899999999999999997443322 11111112268889999999988888999
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhh
Q 015544 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~ 275 (405)
++|++.||+++..+++..+.. +|+.++...+++|+...
T Consensus 185 liGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~~ 222 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSHA 222 (445)
T ss_pred eeeEecchHHHHHHHHhhhhc-ccccceeeecchhhccc
Confidence 999999999999999888874 59999999999887653
No 133
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.47 E-value=6.1e-07 Score=80.04 Aligned_cols=106 Identities=19% Similarity=0.166 Sum_probs=80.8
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC----C-
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY----P- 231 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~----~- 231 (405)
...-|+|+|+||+. -..+.| ..+..+++.+||-|+++++-..-. + ......++..++++|+.+.. |
T Consensus 43 ~G~yPVilF~HG~~-l~ns~Y-s~lL~HIASHGfIVVAPQl~~~~~-----p--~~~~Ei~~aa~V~~WL~~gL~~~Lp~ 113 (307)
T PF07224_consen 43 AGTYPVILFLHGFN-LYNSFY-SQLLAHIASHGFIVVAPQLYTLFP-----P--DGQDEIKSAASVINWLPEGLQHVLPE 113 (307)
T ss_pred CCCccEEEEeechh-hhhHHH-HHHHHHHhhcCeEEEechhhcccC-----C--CchHHHHHHHHHHHHHHhhhhhhCCC
Confidence 45789999999985 344555 889999999999999999875321 1 11234578889999987653 2
Q ss_pred -----CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 232 -----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 232 -----~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
-.++.++|||.||-.|..+|..+..+..+.++|-++|...
T Consensus 114 ~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 114 NVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred CcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 2489999999999999999888765557888888887543
No 134
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.47 E-value=2.7e-07 Score=79.13 Aligned_cols=106 Identities=16% Similarity=0.170 Sum_probs=76.1
Q ss_pred CCCcEEEEeCCC---CCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCc
Q 015544 158 DTTPIAIVIPGL---TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (405)
Q Consensus 158 ~~~P~VvllHG~---~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~ 234 (405)
...|+.||+||. .|+.. ..-..+..+.++||+|+++++-=+.. .+.. ..-..|+..-++++.+.+++.+
T Consensus 65 ~~~klfIfIHGGYW~~g~rk--~clsiv~~a~~~gY~vasvgY~l~~q-----~htL-~qt~~~~~~gv~filk~~~n~k 136 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRK--MCLSIVGPAVRRGYRVASVGYNLCPQ-----VHTL-EQTMTQFTHGVNFILKYTENTK 136 (270)
T ss_pred CCccEEEEEecchhhcCchh--cccchhhhhhhcCeEEEEeccCcCcc-----cccH-HHHHHHHHHHHHHHHHhcccce
Confidence 467899999992 12222 12457788889999999997632211 1111 1123688888999999988654
Q ss_pred -EEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 235 -LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 235 -i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+.+-|||.|+.++++.+.+..++ +|.|+++.|+.+++
T Consensus 137 ~l~~gGHSaGAHLa~qav~R~r~p-rI~gl~l~~GvY~l 174 (270)
T KOG4627|consen 137 VLTFGGHSAGAHLAAQAVMRQRSP-RIWGLILLCGVYDL 174 (270)
T ss_pred eEEEcccchHHHHHHHHHHHhcCc-hHHHHHHHhhHhhH
Confidence 77789999999999998886543 79999988888777
No 135
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.44 E-value=2.1e-06 Score=78.01 Aligned_cols=115 Identities=13% Similarity=0.087 Sum_probs=77.1
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCC--eEEEEeCCCCCCCCCC-CCCcccCCChhHHHHHHHHHHHhCCCC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSIT-SDCFYNAGWTEDAREVIGYLHHEYPKA 233 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy--~vv~~d~rG~G~s~~~-~~~~~~~~~~~Dl~~~l~~l~~~~~~~ 233 (405)
.+.+.++|++||+.. +-+.-+...++.....|+ .++++.+|+.|..... .++........++.++++.+....+..
T Consensus 15 ~~~~~vlvfVHGyn~-~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~ 93 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNN-SFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIK 93 (233)
T ss_pred CCCCeEEEEEeCCCC-CHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCc
Confidence 356789999999964 333333555554444445 7999999988763211 111100111257888888887776788
Q ss_pred cEEEEEEcHHHHHHHHHHhhcC---C----CCCceEEEEEcCCCCh
Q 015544 234 PLFAIGTSIGANILVKYLGEEG---E----KTPVAGAAAICSPWDL 272 (405)
Q Consensus 234 ~i~lvG~S~GG~ia~~yl~~~~---~----~~~v~~~v~i~~~~~~ 272 (405)
+|.+++||||+.+++..+.... . ...+..+++++|-.+.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 9999999999999998765421 1 1257889999887776
No 136
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.43 E-value=4.6e-07 Score=88.13 Aligned_cols=106 Identities=17% Similarity=0.209 Sum_probs=63.3
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC-C-C-CCCC----------------c-ccC---C
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV-S-I-TSDC----------------F-YNA---G 214 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s-~-~-~~~~----------------~-~~~---~ 214 (405)
+.-|+|||-||++| +...| ..++..|+.+||-|+++|+|..... . . .... . +.. .
T Consensus 98 ~~~PvvIFSHGlgg-~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGG-SRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT---TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCc-chhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 56899999999976 45667 8899999999999999999964221 0 0 0000 0 000 0
Q ss_pred ------------ChhHHHHHHHHHHHhC-C---------------------CCcEEEEEEcHHHHHHHHHHhhcCCCCCc
Q 015544 215 ------------WTEDAREVIGYLHHEY-P---------------------KAPLFAIGTSIGANILVKYLGEEGEKTPV 260 (405)
Q Consensus 215 ------------~~~Dl~~~l~~l~~~~-~---------------------~~~i~lvG~S~GG~ia~~yl~~~~~~~~v 260 (405)
..+|+..+++.+.+.. + -.++.++|||+||..++..+.... ++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~---r~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT---RF 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T---T-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc---Cc
Confidence 0247777887775411 0 136999999999999998877763 59
Q ss_pred eEEEEEcC
Q 015544 261 AGAAAICS 268 (405)
Q Consensus 261 ~~~v~i~~ 268 (405)
+++|++++
T Consensus 253 ~~~I~LD~ 260 (379)
T PF03403_consen 253 KAGILLDP 260 (379)
T ss_dssp -EEEEES-
T ss_pred ceEEEeCC
Confidence 99999976
No 137
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.42 E-value=2.2e-06 Score=85.73 Aligned_cols=227 Identities=18% Similarity=0.193 Sum_probs=141.3
Q ss_pred eEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCC
Q 015544 122 RQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (405)
Q Consensus 122 r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G 201 (405)
|...+..||..+-+..+...+. ..+.+.|+++..-|--|.+.........-.|.++|+--....-||-|
T Consensus 421 riwa~a~dgv~VPVSLvyrkd~-----------~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGg 489 (682)
T COG1770 421 RIWATADDGVQVPVSLVYRKDT-----------KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGG 489 (682)
T ss_pred EEEEEcCCCcEeeEEEEEeccc-----------CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeeccc
Confidence 4444557888886665544331 13567899999999888776655455556688999988888889876
Q ss_pred CCCCC---CCCccc-CCChhHHHHHHHHHHHh-CC-CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhh
Q 015544 202 GVSIT---SDCFYN-AGWTEDAREVIGYLHHE-YP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (405)
Q Consensus 202 ~s~~~---~~~~~~-~~~~~Dl~~~l~~l~~~-~~-~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~ 275 (405)
.-... ..+..+ ..-.+|+.++.++|.++ +. ...+++.|.|.||+++...+.+.|+ .++++|+-.|-.|....
T Consensus 490 elG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvltT 567 (682)
T COG1770 490 ELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVLTT 567 (682)
T ss_pred ccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchhhh
Confidence 54321 111111 12237999999998775 33 4589999999999999999999998 78888888776665211
Q ss_pred HHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccccCCHHHHhcCCCHHHHhhhcccccCCCCCHHHHHHhCCCccccCcc
Q 015544 276 DRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSRLANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNV 355 (405)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I 355 (405)
+.+.-+ .-+..||++.-. +. -+...+|...-|+.+.+..-
T Consensus 568 -----------MlD~sl--------------------------PLT~~E~~EWGN-P~--d~e~y~yikSYSPYdNV~a~ 607 (682)
T COG1770 568 -----------MLDPSL--------------------------PLTVTEWDEWGN-PL--DPEYYDYIKSYSPYDNVEAQ 607 (682)
T ss_pred -----------hcCCCC--------------------------CCCccchhhhCC-cC--CHHHHHHHhhcCchhccccC
Confidence 111000 122233333200 00 11223444445665555443
Q ss_pred -cCcEEEEeeCCCCcCCCCC-CCh----HHHhcCCcEEEEee----ccCccccccc
Q 015544 356 -SIPLLCISSLDDPVCTVEA-IPW----DECRSNCSIHAIVS----IFTSFYVPFD 401 (405)
Q Consensus 356 -~vP~Lii~g~dD~ivp~~~-~~~----~~~~~~~~~~l~~t----~~~~~~~~~~ 401 (405)
-.|+|++.|.+|+-|.... +.| .+++...|-.|.-| +|.++...|+
T Consensus 608 ~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~ 663 (682)
T COG1770 608 PYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQ 663 (682)
T ss_pred CCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchH
Confidence 4678999999999999763 333 34444555566655 5655555554
No 138
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.34 E-value=4.8e-06 Score=76.85 Aligned_cols=135 Identities=19% Similarity=0.170 Sum_probs=89.9
Q ss_pred CCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 117 CFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 117 ~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
.-..+|-.+.+.||.+|-.-+...-+. ........||.+-|-.|--+ -..+..=++.||.|+.+|
T Consensus 211 ~~NG~R~kiks~dgneiDtmF~d~r~n-----------~~~ngq~LvIC~EGNAGFYE----vG~m~tP~~lgYsvLGwN 275 (517)
T KOG1553|consen 211 NKNGQRLKIKSSDGNEIDTMFLDGRPN-----------QSGNGQDLVICFEGNAGFYE----VGVMNTPAQLGYSVLGWN 275 (517)
T ss_pred cCCCeEEEEeecCCcchhheeecCCCC-----------CCCCCceEEEEecCCccceE----eeeecChHHhCceeeccC
Confidence 456678888888998775444332210 11234556777778655322 223334455699999999
Q ss_pred CCCCCCCCCCCCCcccCCChhHHHHHHHHHHHh--CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 197 HRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE--YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 197 ~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~--~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
++|+++|.+..-. .+ ...-+.+++++..+. ++...|++.|+|.||..+...|..+|+ |+++|+-++--|+
T Consensus 276 hPGFagSTG~P~p-~n--~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDAtFDDl 347 (517)
T KOG1553|consen 276 HPGFAGSTGLPYP-VN--TLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDATFDDL 347 (517)
T ss_pred CCCccccCCCCCc-cc--chHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeecchhhh
Confidence 9999998765321 11 223344556655443 567889999999999999999999998 9999876664444
No 139
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.31 E-value=4.2e-06 Score=76.35 Aligned_cols=107 Identities=18% Similarity=0.249 Sum_probs=73.9
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCC------C-CCC---------CcccCCC-----
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS------I-TSD---------CFYNAGW----- 215 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~------~-~~~---------~~~~~~~----- 215 (405)
+++-|+|||-||++| +...| ..++-.++.+||-|.++.+|.+..+- . ..+ +....+.
T Consensus 115 ~~k~PvvvFSHGLgg-sRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGG-SRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEeccccc-chhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 578899999999955 67777 88999999999999999999876431 1 000 0000000
Q ss_pred --------hhHHHHHHHHHHHhC-----------------------CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEE
Q 015544 216 --------TEDAREVIGYLHHEY-----------------------PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAA 264 (405)
Q Consensus 216 --------~~Dl~~~l~~l~~~~-----------------------~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v 264 (405)
..++..+++-+.+.. ..+++.++|||+||..+...++.+.+ ++++|
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---FrcaI 269 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRCAI 269 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eeeee
Confidence 134444444443321 12368999999999999877777655 99999
Q ss_pred EEcC
Q 015544 265 AICS 268 (405)
Q Consensus 265 ~i~~ 268 (405)
+.+.
T Consensus 270 ~lD~ 273 (399)
T KOG3847|consen 270 ALDA 273 (399)
T ss_pred eeee
Confidence 9976
No 140
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.28 E-value=3.9e-06 Score=74.47 Aligned_cols=110 Identities=18% Similarity=0.300 Sum_probs=78.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCC-----CeEEEEeCCCC----CCCCC--CCC---------CcccCCChhH
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRG-----WNVVVSNHRGL----GGVSI--TSD---------CFYNAGWTED 218 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~G-----y~vv~~d~rG~----G~s~~--~~~---------~~~~~~~~~D 218 (405)
.-|+ |++||..|+..+ +..++..+...+ --++.+|--|. |.-+. ..| +.....+..-
T Consensus 45 ~iPT-IfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIPT-IFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccce-EEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 3455 499999775444 478888887654 23566666662 11111 011 1111133457
Q ss_pred HHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCC---CceEEEEEcCCCC
Q 015544 219 AREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKT---PVAGAAAICSPWD 271 (405)
Q Consensus 219 l~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~---~v~~~v~i~~~~~ 271 (405)
+..++.++.++|.-.++-+|||||||.-+..|+.+++.+. ++...|++++|++
T Consensus 122 lk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 122 LKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 8899999999999889999999999999999999987642 6999999999988
No 141
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.18 E-value=2.4e-05 Score=68.10 Aligned_cols=108 Identities=18% Similarity=0.208 Sum_probs=81.4
Q ss_pred CCcEEEEeCCCCCCC-ccHHHHHHHHHHhhCCCeEEEEeCCC----CCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCC
Q 015544 159 TTPIAIVIPGLTSDS-AASYIRHLVFNTAKRGWNVVVSNHRG----LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (405)
Q Consensus 159 ~~P~VvllHG~~g~s-~~~y~~~~~~~l~~~Gy~vv~~d~rG----~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~ 233 (405)
.+-.||++-|++.+- ...|...++.++-+.+|..|-+-.|. +|-+... ...+|+..+++++...--.+
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk-------~D~edl~~l~~Hi~~~~fSt 107 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK-------DDVEDLKCLLEHIQLCGFST 107 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc-------ccHHHHHHHHHHhhccCccc
Confidence 345688999986432 35788889999999999999998874 4433332 34689999999887654455
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChh
Q 015544 234 PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 234 ~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
.++++|||-|+.=.+.|+.....+..++++|+.+|..|.+
T Consensus 108 ~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 8999999999999999994433333689999988877764
No 142
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.17 E-value=5.1e-06 Score=76.29 Aligned_cols=114 Identities=14% Similarity=0.087 Sum_probs=69.9
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCC----CeEEEEeCCCCCCC--CCCC-----CCcccCCCh----hHH-H
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----WNVVVSNHRGLGGV--SITS-----DCFYNAGWT----EDA-R 220 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~G----y~vv~~d~rG~G~s--~~~~-----~~~~~~~~~----~Dl-~ 220 (405)
...-|+|+++||..+.....-+......+.+.| .-+|+++.-+.+.. .... ......+.. +.+ .
T Consensus 21 ~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 21 SKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 467899999999622111111223333334433 34566666554411 1110 011111111 222 4
Q ss_pred HHHHHHHHhCCC--CcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 221 EVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 221 ~~l~~l~~~~~~--~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+++.+|.++++. .+..++|+||||..++.++.++|+ .+.+++++|+.++.
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEESET
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCccccc
Confidence 778888888862 227999999999999999999999 89999999987655
No 143
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.14 E-value=7.6e-06 Score=83.04 Aligned_cols=126 Identities=17% Similarity=0.125 Sum_probs=78.4
Q ss_pred CEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCC---CCCccHHHHHHHHHHhh-C-CCeEEEEeCC-C-CCCC
Q 015544 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSAASYIRHLVFNTAK-R-GWNVVVSNHR-G-LGGV 203 (405)
Q Consensus 131 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~---g~s~~~y~~~~~~~l~~-~-Gy~vv~~d~r-G-~G~s 203 (405)
..+.++.+.|.... .....|+||++||.. |+... + ....+++ . |+.||.+|+| | .|-.
T Consensus 77 dcl~l~i~~p~~~~-----------~~~~~pv~v~ihGG~~~~g~~~~-~---~~~~~~~~~~~~~vv~~~yRlg~~g~~ 141 (493)
T cd00312 77 DCLYLNVYTPKNTK-----------PGNSLPVMVWIHGGGFMFGSGSL-Y---PGDGLAREGDNVIVVSINYRLGVLGFL 141 (493)
T ss_pred cCCeEEEEeCCCCC-----------CCCCCCEEEEEcCCccccCCCCC-C---ChHHHHhcCCCEEEEEecccccccccc
Confidence 35677766664310 135689999999932 22222 1 1233333 3 3999999999 5 3322
Q ss_pred CCCCCCcccCCChhHHHHHHHHHHHh---C--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 204 SITSDCFYNAGWTEDAREVIGYLHHE---Y--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 204 ~~~~~~~~~~~~~~Dl~~~l~~l~~~---~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
...........-..|...+++++++. + ...+|.++|+|.||.++..++........++++|+.++...
T Consensus 142 ~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 142 STGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred cCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 11111111111247999999999875 2 24589999999999999887766433336889998887544
No 144
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.14 E-value=1.2e-05 Score=75.03 Aligned_cols=117 Identities=18% Similarity=0.189 Sum_probs=88.5
Q ss_pred CCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhC---C------CeEEEEeCCC
Q 015544 129 DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR---G------WNVVVSNHRG 199 (405)
Q Consensus 129 dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~---G------y~vv~~d~rG 199 (405)
.|-.+++-...+++.+ ...... .++++|||.|+-.+.| .++..|.+. | |.|+++.++|
T Consensus 132 eGL~iHFlhvk~p~~k----------~~k~v~-PlLl~HGwPGsv~EFy--kfIPlLT~p~~hg~~~d~~FEVI~PSlPG 198 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKK----------KKKKVK-PLLLLHGWPGSVREFY--KFIPLLTDPKRHGNESDYAFEVIAPSLPG 198 (469)
T ss_pred cceeEEEEEecCCccc----------cCCccc-ceEEecCCCchHHHHH--hhhhhhcCccccCCccceeEEEeccCCCC
Confidence 5666766666665422 122233 4779999999755555 577777653 3 7999999999
Q ss_pred CCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEE
Q 015544 200 LGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGA 263 (405)
Q Consensus 200 ~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~ 263 (405)
+|-|+.++...++. ..++.+++.+.-+.+-.+.++-|..+|+.|+.+++..+|+ +|.|.
T Consensus 199 ygwSd~~sk~GFn~---~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe--nV~Gl 257 (469)
T KOG2565|consen 199 YGWSDAPSKTGFNA---AATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE--NVLGL 257 (469)
T ss_pred cccCcCCccCCccH---HHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch--hhhHh
Confidence 99999888776653 5677788888888888899999999999999999999999 45543
No 145
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.10 E-value=2.1e-05 Score=70.48 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=47.9
Q ss_pred CCcEEEEeCCCCCCCccHHHHH----HHHHHhhCCCeEEEEeCCC-C----CCCCC---------CCCCcc---cCCC--
Q 015544 159 TTPIAIVIPGLTSDSAASYIRH----LVFNTAKRGWNVVVSNHRG-L----GGVSI---------TSDCFY---NAGW-- 215 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~----~~~~l~~~Gy~vv~~d~rG-~----G~s~~---------~~~~~~---~~~~-- 215 (405)
.++-|+++||... +...+ +. +.+.+.+.++..+.+|-+- . |-... .....+ ....
T Consensus 3 ~k~riLcLHG~~~-na~if-~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQ-NAEIF-RQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT---HHHH-HHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCc-CHHHH-HHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 4677999999853 44433 43 3334444379999999764 2 11100 001111 1111
Q ss_pred --hhHHHHHHHH----HHHhCCCCcEEEEEEcHHHHHHHHHHhhcC------CCCCceEEEEEcCC
Q 015544 216 --TEDAREVIGY----LHHEYPKAPLFAIGTSIGANILVKYLGEEG------EKTPVAGAAAICSP 269 (405)
Q Consensus 216 --~~Dl~~~l~~----l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~------~~~~v~~~v~i~~~ 269 (405)
..++.+.+++ +.+..| =..++|||.||.++..++.... ...+++.+|++|+.
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~ 144 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGF 144 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES--
T ss_pred ccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEccc
Confidence 2344444444 444433 2579999999999998886421 22368999999864
No 146
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.10 E-value=2.6e-05 Score=71.22 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=76.7
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChh-HHHHHHHHHHHhCCCCcEEEEE
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTE-DAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~-Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
|++.++||..| +...| ..++..+... ..|+.++.||.|..... ....+ =+.+.++.|++..|..++.++|
T Consensus 1 ~pLF~fhp~~G-~~~~~-~~L~~~l~~~-~~v~~l~a~g~~~~~~~------~~~l~~~a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGG-SVLAY-APLAAALGPL-LPVYGLQAPGYGAGEQP------FASLDDMAAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCC-cHHHH-HHHHHHhccC-ceeeccccCcccccccc------cCCHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 46889999866 44555 7788888876 89999999998752211 11233 3557778888989999999999
Q ss_pred EcHHHHHHHHHHhhcC-CCCCceEEEEEcCCCC
Q 015544 240 TSIGANILVKYLGEEG-EKTPVAGAAAICSPWD 271 (405)
Q Consensus 240 ~S~GG~ia~~yl~~~~-~~~~v~~~v~i~~~~~ 271 (405)
+|+||+++...|..-. ....|.-+++++++..
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999998876531 1126999999998766
No 147
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.03 E-value=1.2e-05 Score=72.22 Aligned_cols=40 Identities=23% Similarity=0.168 Sum_probs=26.7
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCC----C------CceEEEEEcCCCCh
Q 015544 233 APLFAIGTSIGANILVKYLGEEGEK----T------PVAGAAAICSPWDL 272 (405)
Q Consensus 233 ~~i~lvG~S~GG~ia~~yl~~~~~~----~------~v~~~v~i~~~~~~ 272 (405)
.+|.+|||||||.++-.++....+. . .....+.+++|.--
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G 127 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLG 127 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCC
Confidence 5899999999999986555432211 0 34456777877644
No 148
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.02 E-value=1.4e-05 Score=79.51 Aligned_cols=139 Identities=18% Similarity=0.172 Sum_probs=96.2
Q ss_pred ceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCC
Q 015544 121 RRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (405)
Q Consensus 121 ~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~ 200 (405)
+|..+...||..+.+-.+...+ ...+.++|.+|..+|.-|-+-..+++.--..|.+.||-.+..|-||-
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk~-----------~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGG 510 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKKD-----------IKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGG 510 (712)
T ss_pred EEEEEecCCCCccceEEEEech-----------hhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccC
Confidence 3455566677776655444221 12345789999999976655554434433446678999999999997
Q ss_pred CCCCCCC---CCccc-CCChhHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 201 GGVSITS---DCFYN-AGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 201 G~s~~~~---~~~~~-~~~~~Dl~~~l~~l~~~~--~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
|.-.... .+... ....+|+.+..+++.++. ...++.+.|.|.||.++...+-.+|+ .+.|+++-.|-.|+
T Consensus 511 Ge~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~avia~VpfmDv 586 (712)
T KOG2237|consen 511 GEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFGAVIAKVPFMDV 586 (712)
T ss_pred cccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--HhhhhhhcCcceeh
Confidence 7544322 11111 234589999999998763 35689999999999999988888888 78888877666666
No 149
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.90 E-value=0.00044 Score=65.57 Aligned_cols=115 Identities=14% Similarity=0.187 Sum_probs=76.1
Q ss_pred CCCCcEEEEeCCCCCCCcc-HHHHHHHHHHhhCCCeEEEEeCCC--CCCCCCC-----------CCCcccC---------
Q 015544 157 DDTTPIAIVIPGLTSDSAA-SYIRHLVFNTAKRGWNVVVSNHRG--LGGVSIT-----------SDCFYNA--------- 213 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~-~y~~~~~~~l~~~Gy~vv~~d~rG--~G~s~~~-----------~~~~~~~--------- 213 (405)
.....+||++||.+.+.+. ..+..+-..|.++||.++.+..+. ....+.. ....-..
T Consensus 84 ~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 84 AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 4567889999998655443 456777788999999999999987 1111100 0000000
Q ss_pred -----------CChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChh
Q 015544 214 -----------GWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 214 -----------~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
....-+.+++.+++ +++..+++++||+.|+..+++|+.+.+.. .+++.|+|++.+...
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~-~~~~~~ivlIg~G~gA~~~~~~la~~~~~-~~daLV~I~a~~p~~ 232 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQ-QQGGKNIVLIGHGTGAGWAARYLAEKPPP-MPDALVLINAYWPQP 232 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHH-hcCCceEEEEEeChhHHHHHHHHhcCCCc-ccCeEEEEeCCCCcc
Confidence 00112334444443 34555699999999999999999998763 489999999865543
No 150
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.89 E-value=0.00032 Score=70.27 Aligned_cols=113 Identities=16% Similarity=0.125 Sum_probs=74.0
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHH------------------HHhhCCCeEEEEeC-CCCCCCCCCCCCccc--CCC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVF------------------NTAKRGWNVVVSNH-RGLGGVSITSDCFYN--AGW 215 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~------------------~l~~~Gy~vv~~d~-rG~G~s~~~~~~~~~--~~~ 215 (405)
..++|+|+.++|.+|+|.. + ..+.+ ...+ -.+++.+|. +|+|.|......... ...
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~-~-G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~ 150 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSM-F-ALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFSYADKADYDHNESEV 150 (462)
T ss_pred CCCCCEEEEECCCCcHHHH-H-hhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcccCCCCCCCCChHHH
Confidence 4578999999999987643 1 11110 1122 268899996 588887654322111 223
Q ss_pred hhHHHHHHHHHHHhCCC---CcEEEEEEcHHHHHHHHHHhhcC--------CCCCceEEEEEcCCCCh
Q 015544 216 TEDAREVIGYLHHEYPK---APLFAIGTSIGANILVKYLGEEG--------EKTPVAGAAAICSPWDL 272 (405)
Q Consensus 216 ~~Dl~~~l~~l~~~~~~---~~i~lvG~S~GG~ia~~yl~~~~--------~~~~v~~~v~i~~~~~~ 272 (405)
.+|+.++++...+++|. .+++++|+|+||..+..++.+-- ....++|+++.++-.+.
T Consensus 151 a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 151 SEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 47888888888777774 79999999999999887765521 11257887766654443
No 151
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.84 E-value=0.0002 Score=71.41 Aligned_cols=111 Identities=23% Similarity=0.278 Sum_probs=71.0
Q ss_pred CCcEEEEeCCCCCCCccHHHH-HHHHHHh-hCCCeEEEEeCCCCCCCCCCCCCcc------c-CCChhHHHHHHHHHHHh
Q 015544 159 TTPIAIVIPGLTSDSAASYIR-HLVFNTA-KRGWNVVVSNHRGLGGVSITSDCFY------N-AGWTEDAREVIGYLHHE 229 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~-~~~~~l~-~~Gy~vv~~d~rG~G~s~~~~~~~~------~-~~~~~Dl~~~l~~l~~~ 229 (405)
..|++|++-| .|.-...++. .+...++ +.|--++++.||-+|.|....+... + ..-..|+...+++++.+
T Consensus 28 ~gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 4788877766 3332222222 2444444 4588999999999999975432111 1 11136999999999977
Q ss_pred C---CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 230 Y---PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 230 ~---~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+ ++.|++++|.|.||+++..+-.++|+ .+.|+++-+.|...
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~a 150 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQA 150 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CCH
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceeee
Confidence 6 46799999999999999999999999 89999999987654
No 152
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.83 E-value=0.00025 Score=69.86 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=67.9
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCC----eEEEEeCCCCCCCCCCCCCcc-cCCChhHH-HHHHHHHHHhCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW----NVVVSNHRGLGGVSITSDCFY-NAGWTEDA-REVIGYLHHEYP 231 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy----~vv~~d~rG~G~s~~~~~~~~-~~~~~~Dl-~~~l~~l~~~~~ 231 (405)
...|+|+++||-.- ....-+...++.+.++|. -+|.+|..+.. . ...... ...+.+.+ .+++.++.++|+
T Consensus 207 ~~~PvlyllDG~~w-~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~-R~~el~~~~~f~~~l~~eLlP~I~~~y~ 282 (411)
T PRK10439 207 EERPLAILLDGQFW-AESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--H-RSQELPCNADFWLAVQQELLPQVRAIAP 282 (411)
T ss_pred CCCCEEEEEECHHh-hhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--c-ccccCCchHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999431 122123455666666663 35666653211 0 101111 11122333 466677888775
Q ss_pred ----CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 232 ----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 232 ----~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
.++.+++|+||||..++..+..+|+ .+.+++++|+.+
T Consensus 283 ~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs~ 323 (411)
T PRK10439 283 FSDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGSF 323 (411)
T ss_pred CCCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccce
Confidence 3468999999999999999999999 899999999753
No 153
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.78 E-value=0.00017 Score=67.69 Aligned_cols=114 Identities=12% Similarity=0.147 Sum_probs=79.3
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCC--eEEEEeCCCCCCCCCC-CCCcccCCChhHHHHHHHHHHHhCCCCc
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW--NVVVSNHRGLGGVSIT-SDCFYNAGWTEDAREVIGYLHHEYPKAP 234 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy--~vv~~d~rG~G~s~~~-~~~~~~~~~~~Dl~~~l~~l~~~~~~~~ 234 (405)
..+-++||+||+.. +-+.-....++-..+.|+ .++++.++..|..-.. .++..+.....+++.++++|.++.+..+
T Consensus 114 ~~k~vlvFvHGfNn-tf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNN-TFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCC-chhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 55678999999864 333333566666666554 6889999987764221 1222222223689999999999988889
Q ss_pred EEEEEEcHHHHHHHHHHhhc----CC--CCCceEEEEEcCCCCh
Q 015544 235 LFAIGTSIGANILVKYLGEE----GE--KTPVAGAAAICSPWDL 272 (405)
Q Consensus 235 i~lvG~S~GG~ia~~yl~~~----~~--~~~v~~~v~i~~~~~~ 272 (405)
|++++||||..+++..+... .+ +..++-+|+-+|-.|.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 99999999999999876432 11 2357888888876666
No 154
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.75 E-value=2.6e-05 Score=69.84 Aligned_cols=53 Identities=21% Similarity=0.204 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 217 EDAREVIGYLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+-+.+++++++++-. ..+|.++|.|.||-+++.++...+. |+++|+++++.-.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~~~ 58 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--SB-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCceeE
Confidence 457889999987632 3689999999999999999999986 9999999986544
No 155
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.74 E-value=0.00016 Score=82.07 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=67.9
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHH-HHHHHHHhCCCCcEEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDARE-VIGYLHHEYPKAPLFAI 238 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~-~l~~l~~~~~~~~i~lv 238 (405)
.|.++++||++|+ ...| ..+++.+.. +++|+.++.+|+|..... .+ ..+++.+ .++.+....+..++.++
T Consensus 1068 ~~~l~~lh~~~g~-~~~~-~~l~~~l~~-~~~v~~~~~~g~~~~~~~---~~---~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGF-AWQF-SVLSRYLDP-QWSIYGIQSPRPDGPMQT---AT---SLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCc-hHHH-HHHHHhcCC-CCcEEEEECCCCCCCCCC---CC---CHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 4668899999764 3445 778877754 699999999999865211 11 2233332 22333333455689999
Q ss_pred EEcHHHHHHHHHHhhc---CCCCCceEEEEEcC
Q 015544 239 GTSIGANILVKYLGEE---GEKTPVAGAAAICS 268 (405)
Q Consensus 239 G~S~GG~ia~~yl~~~---~~~~~v~~~v~i~~ 268 (405)
||||||.++..++.+. ++ .+..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~--~v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGE--EVAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCC--ceeEEEEecC
Confidence 9999999999998753 44 6888888875
No 156
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.74 E-value=0.00011 Score=70.63 Aligned_cols=105 Identities=21% Similarity=0.203 Sum_probs=74.0
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCe---EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEE
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWN---VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~---vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lv 238 (405)
.++++||+. .....+ ..+...+...||. +..+++++.... .+ .....+-+...++.+....+..++.++
T Consensus 61 pivlVhG~~-~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~---~~~~~~ql~~~V~~~l~~~ga~~v~Li 132 (336)
T COG1075 61 PIVLVHGLG-GGYGNF-LPLDYRLAILGWLTNGVYAFELSGGDGT---YS---LAVRGEQLFAYVDEVLAKTGAKKVNLI 132 (336)
T ss_pred eEEEEccCc-CCcchh-hhhhhhhcchHHHhcccccccccccCCC---cc---ccccHHHHHHHHHHHHhhcCCCceEEE
Confidence 477999984 344444 6677777777887 888888764111 01 111234555566666666666799999
Q ss_pred EEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhh
Q 015544 239 GTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 239 G~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~ 274 (405)
||||||.++..|++..+....|+.++.+++|-....
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 999999999988888885558999999999876543
No 157
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.71 E-value=0.0001 Score=63.73 Aligned_cols=129 Identities=22% Similarity=0.423 Sum_probs=72.1
Q ss_pred CEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHH-H-HHHHHhhCCCeEEEEeC--CCC---CCC
Q 015544 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR-H-LVFNTAKRGWNVVVSNH--RGL---GGV 203 (405)
Q Consensus 131 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~-~-~~~~l~~~Gy~vv~~d~--rG~---G~s 203 (405)
-.+++..+.|++.+ .....|++.++-|++.. ++.++. . +...+.++|..||.+|- ||. |..
T Consensus 26 c~Mtf~vylPp~a~-----------~~k~~P~lf~LSGLTCT-~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~ 93 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAP-----------RGKRCPVLFYLSGLTCT-HENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDD 93 (283)
T ss_pred cceEEEEecCCCcc-----------cCCcCceEEEecCCccc-chhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCc
Confidence 44566677776532 23457999999999864 554543 3 33445678999999985 553 222
Q ss_pred CC----CCCCccc-C---CChhHHHHHHHHHHHhCC-----------CCcEEEEEEcHHHHHHHHHHhhcCCC-CCceEE
Q 015544 204 SI----TSDCFYN-A---GWTEDAREVIGYLHHEYP-----------KAPLFAIGTSIGANILVKYLGEEGEK-TPVAGA 263 (405)
Q Consensus 204 ~~----~~~~~~~-~---~~~~Dl~~~l~~l~~~~~-----------~~~i~lvG~S~GG~ia~~yl~~~~~~-~~v~~~ 263 (405)
+- ....+|- + -|. .--.+.+|+.++.| ..++.+.||||||.=++..+.+.+.. ..+.+.
T Consensus 94 eswDFG~GAGFYvnAt~epw~-~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAF 172 (283)
T KOG3101|consen 94 ESWDFGQGAGFYVNATQEPWA-KHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAF 172 (283)
T ss_pred ccccccCCceeEEecccchHh-hhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecc
Confidence 10 0011111 0 111 11123333333322 34689999999998877555554441 136666
Q ss_pred EEEcCCCCh
Q 015544 264 AAICSPWDL 272 (405)
Q Consensus 264 v~i~~~~~~ 272 (405)
.-|++|.+.
T Consensus 173 API~NP~~c 181 (283)
T KOG3101|consen 173 APICNPINC 181 (283)
T ss_pred ccccCcccC
Confidence 666666554
No 158
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.70 E-value=0.00097 Score=59.38 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=79.6
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhC-C--CeEEEEeCCCCCCCCCCCCC---cc---cCCChhHHHHHHHHHHH
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-G--WNVVVSNHRGLGGVSITSDC---FY---NAGWTEDAREVIGYLHH 228 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~-G--y~vv~~d~rG~G~s~~~~~~---~~---~~~~~~Dl~~~l~~l~~ 228 (405)
..++++++++|-+|. ...| ..+++.+... + .+++.+-+-||..-+..... .. ..+..+.+..-++.+++
T Consensus 27 ~~~~li~~IpGNPG~-~gFY-~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGL-LGFY-TEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCCc-hhHH-HHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 578999999998874 3444 7888887653 2 66999999998765521111 10 12334677788888888
Q ss_pred hCC-CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcC
Q 015544 229 EYP-KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 229 ~~~-~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~ 268 (405)
--| +.+++++|||.|+.++++.+-......+|..++++-|
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 776 5689999999999999999886555557888888866
No 159
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.68 E-value=0.00011 Score=71.77 Aligned_cols=114 Identities=21% Similarity=0.190 Sum_probs=74.8
Q ss_pred CCCCcEEEEeCCCC--CCCccHHHHHHHHHHhhCC-CeEEEEeCC-C-CCCC---CCCCCCccc-CCChhHHHHHHHHHH
Q 015544 157 DDTTPIAIVIPGLT--SDSAASYIRHLVFNTAKRG-WNVVVSNHR-G-LGGV---SITSDCFYN-AGWTEDAREVIGYLH 227 (405)
Q Consensus 157 ~~~~P~VvllHG~~--g~s~~~y~~~~~~~l~~~G-y~vv~~d~r-G-~G~s---~~~~~~~~~-~~~~~Dl~~~l~~l~ 227 (405)
....|++|+|||.. +++.+.. ..=...|+++| +-||.+|+| | .|-- .....+.+. .--..|...+++|++
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~ 169 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVR 169 (491)
T ss_pred CCCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHH
Confidence 35689999999932 2222221 11334567777 999999999 2 3422 222112211 123479999999998
Q ss_pred Hh---CC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 228 HE---YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 228 ~~---~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
+. ++ ...|.++|.|.||+.++.+++--..+..+..+|+.|++..
T Consensus 170 ~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 170 DNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 75 33 4579999999999999887776433446888888888765
No 160
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.65 E-value=0.00011 Score=75.18 Aligned_cols=124 Identities=18% Similarity=0.117 Sum_probs=74.2
Q ss_pred CEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCC---CCCc-cHHHHHHHHHHhhCCCeEEEEeCCC--CC--C
Q 015544 131 GMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLT---SDSA-ASYIRHLVFNTAKRGWNVVVSNHRG--LG--G 202 (405)
Q Consensus 131 ~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~---g~s~-~~y~~~~~~~l~~~Gy~vv~~d~rG--~G--~ 202 (405)
.-+.++.+.|.... ..+..|++|++||.. |++. ..| .-...+++++.-||.+|+|= +| .
T Consensus 107 DCL~LnI~~P~~~~-----------~~~~lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~ 173 (535)
T PF00135_consen 107 DCLYLNIYTPSNAS-----------SNSKLPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLS 173 (535)
T ss_dssp ---EEEEEEETSSS-----------STTSEEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-B
T ss_pred hHHHHhhhhccccc-----------cccccceEEEeecccccCCCcccccc--cccccccCCCEEEEEeccccccccccc
Confidence 36788877766521 123689999999932 3221 223 34455667899999999992 22 2
Q ss_pred CCCCCCCcccCCChhHHHHHHHHHHHhC---C--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcC
Q 015544 203 VSITSDCFYNAGWTEDAREVIGYLHHEY---P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 203 s~~~~~~~~~~~~~~Dl~~~l~~l~~~~---~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~ 268 (405)
++.......+. -..|...+++|+++.- + ..+|.++|+|.||..+...+.....+..+.++|+.|+
T Consensus 174 ~~~~~~~~gN~-Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 174 LGDLDAPSGNY-GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp SSSTTSHBSTH-HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred ccccccCchhh-hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 21111110111 1379999999998753 2 3579999999999998877766443447999999998
No 161
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.59 E-value=0.0015 Score=64.32 Aligned_cols=102 Identities=14% Similarity=0.070 Sum_probs=67.6
Q ss_pred CCCcEEEEe----C--CCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHH----HHHHHHHH
Q 015544 158 DTTPIAIVI----P--GLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDA----REVIGYLH 227 (405)
Q Consensus 158 ~~~P~Vvll----H--G~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl----~~~l~~l~ 227 (405)
.++|.||+= | |++|-... +-+-.+.+.|+.|+.+...-. +.+. .-.+|+ .+.++.+.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~d----SevG~AL~~GHPvYFV~F~p~-----P~pg----QTl~DV~~ae~~Fv~~V~ 133 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKPD----SEVGVALRAGHPVYFVGFFPE-----PEPG----QTLEDVMRAEAAFVEEVA 133 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCcc----cHHHHHHHcCCCeEEEEecCC-----CCCC----CcHHHHHHHHHHHHHHHH
Confidence 456766654 3 45443332 334445566999998877521 1111 112454 44566677
Q ss_pred HhCCCC-cEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhh
Q 015544 228 HEYPKA-PLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 228 ~~~~~~-~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~ 274 (405)
..+|.. |.+++|-..||..++.+++..|+ .+.-+|+-+.|.+...
T Consensus 134 ~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 134 ERHPDAPKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLAGAPLSYWA 179 (581)
T ss_pred HhCCCCCCceEEeccHHHHHHHHHHhcCcC--ccCceeecCCCccccc
Confidence 788865 89999999999999999999999 6777777777776543
No 162
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.55 E-value=0.0009 Score=58.08 Aligned_cols=115 Identities=16% Similarity=0.151 Sum_probs=75.5
Q ss_pred CCCcEEEEeCCCCCCCccHHHHH--------------HHHHHhhCCCeEEEEeCCCCCC--CCCCCCCcccCCChhHHHH
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRH--------------LVFNTAKRGWNVVVSNHRGLGG--VSITSDCFYNAGWTEDARE 221 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~--------------~~~~l~~~Gy~vv~~d~rG~G~--s~~~~~~~~~~~~~~Dl~~ 221 (405)
.....+|++||-+--....|.|+ +++.+.+.||.|+++|.--+-. .....+..|...-.+.+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 34568999999542222334343 4566778899999999753211 0112233343333455555
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 222 VIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 222 ~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+..++........++++.||.||...+.++.+.+++..|.++++-++++..
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 555554443455799999999999999999999887788888888877544
No 163
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.53 E-value=0.00015 Score=71.05 Aligned_cols=87 Identities=15% Similarity=0.174 Sum_probs=65.8
Q ss_pred HHHHHHHHHhhCCCeE-----EE-EeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHH
Q 015544 177 YIRHLVFNTAKRGWNV-----VV-SNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKY 250 (405)
Q Consensus 177 y~~~~~~~l~~~Gy~v-----v~-~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~y 250 (405)
++..+++.|.+.||.. .+ +|+|=- +. ........+++.|+.+.+.. +.|++++||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~-------~~-~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS-------PA-ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc-------hh-hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 5688999999888753 22 677731 11 11234577888888887776 7899999999999999999
Q ss_pred HhhcCCC----CCceEEEEEcCCCCh
Q 015544 251 LGEEGEK----TPVAGAAAICSPWDL 272 (405)
Q Consensus 251 l~~~~~~----~~v~~~v~i~~~~~~ 272 (405)
+...+.. ..|++.|.+++|+.-
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCC
Confidence 9887542 369999999999864
No 164
>PRK04940 hypothetical protein; Provisional
Probab=97.50 E-value=0.00074 Score=58.07 Aligned_cols=35 Identities=9% Similarity=-0.118 Sum_probs=29.7
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 233 ~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
.++.++|.|+||..|..++.+++- .+|+|+|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-----~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-----RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-----CEEEECCCCCh
Confidence 479999999999999998888764 47889987665
No 165
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.49 E-value=0.00015 Score=71.76 Aligned_cols=107 Identities=21% Similarity=0.325 Sum_probs=65.0
Q ss_pred CCCcEEEEeCCCC-CCCccHHHHHHHHHHhhCC--CeEEEEeCCC-CCCCCCCCCCcccCCChhHHHHH----HHHHHHh
Q 015544 158 DTTPIAIVIPGLT-SDSAASYIRHLVFNTAKRG--WNVVVSNHRG-LGGVSITSDCFYNAGWTEDAREV----IGYLHHE 229 (405)
Q Consensus 158 ~~~P~VvllHG~~-g~s~~~y~~~~~~~l~~~G--y~vv~~d~rG-~G~s~~~~~~~~~~~~~~Dl~~~----l~~l~~~ 229 (405)
...|++|+.||.. -.+.+.+++.+-..+...| ..+..+|++. +|+-.... ..+-...+ +..+..+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h-------~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKH-------AAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHH-------HHHHHHHHhhhhhhhhhcc
Confidence 4568999999976 2223333344555554444 4677788875 55421110 01222222 2334556
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 230 YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 230 ~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
||..+|+++|.|||+.+++.......+. -|+++||++=|.+-
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv-~V~~vVCigypl~~ 288 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDV-EVDAVVCIGYPLDT 288 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCc-eEEEEEEecccccC
Confidence 8899999999999988877766555443 38999988765543
No 166
>PLN02606 palmitoyl-protein thioesterase
Probab=97.40 E-value=0.0055 Score=56.94 Aligned_cols=105 Identities=12% Similarity=0.153 Sum_probs=64.6
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhC-CCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHH--hCCCCcE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH--EYPKAPL 235 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~-Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~--~~~~~~i 235 (405)
..| ||+.||++.+....-+..+.+.+.+. |.-+..+- .|-+ . ...+.....+.+..+.+.+++ +..+ =+
T Consensus 26 ~~P-vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~----~-~~s~~~~~~~Qv~~vce~l~~~~~L~~-G~ 97 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNG----V-QDSLFMPLRQQASIACEKIKQMKELSE-GY 97 (306)
T ss_pred CCC-EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCC----c-ccccccCHHHHHHHHHHHHhcchhhcC-ce
Confidence 445 67999996322223457888888533 66554444 3321 1 111111122444455454443 2222 49
Q ss_pred EEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 236 ~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
.++|+|.||.++-.++.+.+...+|+-.|++++|..
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999999876457999999998653
No 167
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.35 E-value=0.0024 Score=56.07 Aligned_cols=84 Identities=12% Similarity=0.035 Sum_probs=56.6
Q ss_pred HHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC-C
Q 015544 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE-K 257 (405)
Q Consensus 179 ~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~-~ 257 (405)
..+...+.. ++.|+.++.+|++.+..... ...+......+.+....+..++.++|||+||.++...+..... .
T Consensus 16 ~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~ 89 (212)
T smart00824 16 ARLAAALRG-RRDVSALPLPGFGPGEPLPA-----SADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARG 89 (212)
T ss_pred HHHHHhcCC-CccEEEecCCCCCCCCCCCC-----CHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCC
Confidence 667777765 58999999999986543211 1112233344555555667789999999999999887775322 1
Q ss_pred CCceEEEEEcC
Q 015544 258 TPVAGAAAICS 268 (405)
Q Consensus 258 ~~v~~~v~i~~ 268 (405)
..+.+++++++
T Consensus 90 ~~~~~l~~~~~ 100 (212)
T smart00824 90 IPPAAVVLLDT 100 (212)
T ss_pred CCCcEEEEEcc
Confidence 25788887765
No 168
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.28 E-value=0.0021 Score=61.59 Aligned_cols=109 Identities=14% Similarity=0.126 Sum_probs=68.9
Q ss_pred CCcEEEEeCCCCC---CCcc--HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCC
Q 015544 159 TTPIAIVIPGLTS---DSAA--SYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA 233 (405)
Q Consensus 159 ~~P~VvllHG~~g---~s~~--~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~ 233 (405)
+.|+||++||.+- .... .++..+.+.+ + ...++++|+.-...-+. ...| .....++.+..+++.+..+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~~--~~~y-PtQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDEH--GHKY-PTQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccccC--CCcC-chHHHHHHHHHHHHHhccCCC
Confidence 4699999999421 1111 1222222333 3 46999999975431000 1111 134578888999998666778
Q ss_pred cEEEEEEcHHHHHHHHHHhhcCC---CCCceEEEEEcCCCCh
Q 015544 234 PLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDL 272 (405)
Q Consensus 234 ~i~lvG~S~GG~ia~~yl~~~~~---~~~v~~~v~i~~~~~~ 272 (405)
.|.++|-|.||++++.++..-.. ...-+++|+|+|=.++
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 99999999999999987654222 1246899999985444
No 169
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.10 E-value=0.0016 Score=54.99 Aligned_cols=56 Identities=11% Similarity=0.054 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC--CCceEEEEEcCCCCh
Q 015544 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK--TPVAGAAAICSPWDL 272 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~--~~v~~~v~i~~~~~~ 272 (405)
.++...++....++|..+++++|||+||.++...+...... ..+..++..++|...
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 45666666667778999999999999999999877766442 256778888876544
No 170
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.10 E-value=0.0095 Score=53.85 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=67.7
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhC-CCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHH--hCCCCcEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH--EYPKAPLF 236 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~-Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~--~~~~~~i~ 236 (405)
.| +|+.||+..++.+.-+.++.+.+.+. |..|.+++. |-| ....+..-..+.+..+.+.+++ +.++ =+.
T Consensus 24 ~P-~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g-----~~~s~l~pl~~Qv~~~ce~v~~m~~lsq-Gyn 95 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG-----IKDSSLMPLWEQVDVACEKVKQMPELSQ-GYN 95 (296)
T ss_pred CC-EEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC-----cchhhhccHHHHHHHHHHHHhcchhccC-ceE
Confidence 44 77999997655544457888888874 888888875 333 0111111223445555555543 2222 489
Q ss_pred EEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 237 AIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
++|.|.||.++-.++..-++ .+++..|++++|.-
T Consensus 96 ivg~SQGglv~Raliq~cd~-ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDN-PPVKNFISLGGPHA 129 (296)
T ss_pred EEEEccccHHHHHHHHhCCC-CCcceeEeccCCcC
Confidence 99999999998766666555 68999999998753
No 171
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.10 E-value=0.01 Score=57.18 Aligned_cols=109 Identities=20% Similarity=0.242 Sum_probs=73.6
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhC-CCeEEEEeCCCCCCCCCCCC-------------------C-------
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSD-------------------C------- 209 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~-Gy~vv~~d~rG~G~s~~~~~-------------------~------- 209 (405)
.+.+.+|++++|++|+....|...+.+.++++ +..|+.+|+=|.|.-+..++ .
T Consensus 32 Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~~L~~i~i~~~~i~ 111 (403)
T PF11144_consen 32 KEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKKSLEKINIDSESIN 111 (403)
T ss_pred CCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHHHHHHcCccccccc
Confidence 35678999999999988888877778888764 44555566666553221100 0
Q ss_pred ------------------------c------------------c-cCC--ChhHHHHHHHHHHHhCC--C--CcEEEEEE
Q 015544 210 ------------------------F------------------Y-NAG--WTEDAREVIGYLHHEYP--K--APLFAIGT 240 (405)
Q Consensus 210 ------------------------~------------------~-~~~--~~~Dl~~~l~~l~~~~~--~--~~i~lvG~ 240 (405)
+ | ++| .+-|...++.++.+.++ . -|++++|+
T Consensus 112 ~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~ 191 (403)
T PF11144_consen 112 TYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGS 191 (403)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEec
Confidence 0 0 000 02377778888888775 2 48999999
Q ss_pred cHHHHHHHHHHhhcCCCCCceEEEEEc
Q 015544 241 SIGANILVKYLGEEGEKTPVAGAAAIC 267 (405)
Q Consensus 241 S~GG~ia~~yl~~~~~~~~v~~~v~i~ 267 (405)
|.||.++...+.-.|- .+++++=-+
T Consensus 192 s~G~yla~l~~k~aP~--~~~~~iDns 216 (403)
T PF11144_consen 192 SHGGYLAHLCAKIAPW--LFDGVIDNS 216 (403)
T ss_pred CcHHHHHHHHHhhCcc--ceeEEEecC
Confidence 9999999888777777 677766443
No 172
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.04 E-value=0.0075 Score=56.12 Aligned_cols=105 Identities=13% Similarity=0.118 Sum_probs=66.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhC-CCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHH--hCCCCcE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH--EYPKAPL 235 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~-Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~--~~~~~~i 235 (405)
..| +|+.||++.+....-+..+.+.+.+. |..+.++.. |.+ . ...+.....+.+..+.+.+++ +..+ =+
T Consensus 25 ~~P-~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~--~-~~s~~~~~~~Qve~vce~l~~~~~l~~-G~ 96 (314)
T PLN02633 25 SVP-FIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG--V-GDSWLMPLTQQAEIACEKVKQMKELSQ-GY 96 (314)
T ss_pred CCC-eEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC--c-cccceeCHHHHHHHHHHHHhhchhhhC-cE
Confidence 445 66999996544444567777777553 666665533 332 1 111222223444444444443 2222 39
Q ss_pred EEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 236 FAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 236 ~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
.++|+|.||.++-.++.+.++..+|+-.|++++|..
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 999999999999999998876447999999998654
No 173
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.02 E-value=0.021 Score=52.01 Aligned_cols=103 Identities=13% Similarity=0.100 Sum_probs=61.1
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCC--CcEEEEEE
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPK--APLFAIGT 240 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~--~~i~lvG~ 240 (405)
+|++=||.| +....+...++...+.|++++++-.+-..-.. +. .+...-+..+++.+.+.-.. .++++..+
T Consensus 2 lvvl~gW~g-A~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~---~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMG-AKPKHLAKYSDLYQDPGFDILLVTSPPADFFW---PS---KRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCC-CCHHHHHHHHHHHHhcCCeEEEEeCCHHHHee---ec---cchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 557778876 45555566677777799999998765321110 00 11223344455555443322 28999999
Q ss_pred cHHHHHHHHHHhh----cC---CCC-CceEEEEEcCCCCh
Q 015544 241 SIGANILVKYLGE----EG---EKT-PVAGAAAICSPWDL 272 (405)
Q Consensus 241 S~GG~ia~~yl~~----~~---~~~-~v~~~v~i~~~~~~ 272 (405)
|.||......+.+ .. ... +++|.|.=|+|...
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~ 114 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIP 114 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcc
Confidence 9988887765542 11 111 38888877777543
No 174
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.93 E-value=0.0018 Score=66.26 Aligned_cols=103 Identities=17% Similarity=0.253 Sum_probs=61.3
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhh----------------CCCeEEEEeCCC-----CCCCCCCCCCcccCCChhH
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAK----------------RGWNVVVSNHRG-----LGGVSITSDCFYNAGWTED 218 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~----------------~Gy~vv~~d~rG-----~G~s~~~~~~~~~~~~~~D 218 (405)
.=.|+++||-.|+-.. +|.++..... ..|+-.+.|.-+ ||++- ...++-
T Consensus 89 GIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l--------~dQtEY 158 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL--------LDQTEY 158 (973)
T ss_pred CceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH--------HHHHHH
Confidence 3348899998875433 4666655542 124555555533 11100 123456
Q ss_pred HHHHHHHHHHhCCC---------CcEEEEEEcHHHHHHHHHHhhcCC-CCCceEEEEEcCCCCh
Q 015544 219 AREVIGYLHHEYPK---------APLFAIGTSIGANILVKYLGEEGE-KTPVAGAAAICSPWDL 272 (405)
Q Consensus 219 l~~~l~~l~~~~~~---------~~i~lvG~S~GG~ia~~yl~~~~~-~~~v~~~v~i~~~~~~ 272 (405)
+.++|.+|...|.. ..++++||||||.+|...+.-... +..|.-.+..++|...
T Consensus 159 V~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 159 VNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 77777777766532 249999999999998766543211 1147777777776543
No 175
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.82 E-value=0.0034 Score=51.89 Aligned_cols=37 Identities=16% Similarity=0.344 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh
Q 015544 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
+.+.+.++.+.++++..++++.|||+||.+|...+..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 4666777777888888899999999999999877654
No 176
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.74 E-value=0.004 Score=43.82 Aligned_cols=49 Identities=14% Similarity=0.258 Sum_probs=28.0
Q ss_pred CCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCcc
Q 015544 118 FSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA 175 (405)
Q Consensus 118 ~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~ 175 (405)
.+.+...++++||..+.+.-...+.. .......+|+|++.||+.++|..
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~---------~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKN---------SSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTT---------CTTTTTT--EEEEE--TT--GGG
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCC---------CcccCCCCCcEEEECCcccChHH
Confidence 55688899999999999877655431 11245678999999999876654
No 177
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.73 E-value=0.009 Score=53.78 Aligned_cols=98 Identities=18% Similarity=0.207 Sum_probs=58.2
Q ss_pred CCcEEEEeCCC-CCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCCh----hHHHHHHHHHHHhCC--
Q 015544 159 TTPIAIVIPGL-TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWT----EDAREVIGYLHHEYP-- 231 (405)
Q Consensus 159 ~~P~VvllHG~-~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~----~Dl~~~l~~l~~~~~-- 231 (405)
...+|=|+-|. .|..-....+.+.+.|+++||.|++.=+.- .+-+...+ +..+.+++.+..+..
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 34556666662 233333344999999999999999986641 11111111 244455555555432
Q ss_pred --CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEc
Q 015544 232 --KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (405)
Q Consensus 232 --~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~ 267 (405)
.-|++-+|||||+-+-+........ .-++-++++
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~--~r~gniliS 122 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDV--ERAGNILIS 122 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccC--cccceEEEe
Confidence 2479999999999987765544433 234555554
No 178
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.72 E-value=0.044 Score=48.31 Aligned_cols=106 Identities=18% Similarity=0.212 Sum_probs=61.1
Q ss_pred CCcEEEEeCCCCCCCccHH---HHHHHHHHhhCCCeEEEEeCCC------CCCCCC------C----CCCc--cc-----
Q 015544 159 TTPIAIVIPGLTSDSAASY---IRHLVFNTAKRGWNVVVSNHRG------LGGVSI------T----SDCF--YN----- 212 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y---~~~~~~~l~~~Gy~vv~~d~rG------~G~s~~------~----~~~~--~~----- 212 (405)
.++-|+++||+.- |.+.+ ...+-+.+.+. +.++.+|-+- .-.+.. + +.+. +.
T Consensus 4 ~k~rvLcLHGfrQ-sg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQ-SGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhh-ccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 4567999999864 34433 12344555555 7788888772 111111 0 0000 00
Q ss_pred ----CCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh--cC----CCCCceEEEEEcC
Q 015544 213 ----AGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE--EG----EKTPVAGAAAICS 268 (405)
Q Consensus 213 ----~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~--~~----~~~~v~~~v~i~~ 268 (405)
.++.+-+..+.+++++..|- =.++|+|.|+.++..+++. .+ ...+++=+|++++
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SG 145 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISG 145 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEec
Confidence 01223477777888887764 3689999999999888772 22 1224677776654
No 179
>COG0627 Predicted esterase [General function prediction only]
Probab=96.71 E-value=0.0049 Score=58.30 Aligned_cols=114 Identities=18% Similarity=0.287 Sum_probs=70.2
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHH-HhhCCCeEEEEeC--CCCC------------CCC---CCCCC-ccc-CCCh
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFN-TAKRGWNVVVSNH--RGLG------------GVS---ITSDC-FYN-AGWT 216 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~-l~~~Gy~vv~~d~--rG~G------------~s~---~~~~~-~~~-~~~~ 216 (405)
+..-|++.++||.+++....|.+.=.+. ....|+.++..|- |+.+ .+= ...+. ... ..|.
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 4578999999999876545554444444 4457888888633 2222 110 00000 000 1121
Q ss_pred hH-HHHHHHHHHHhCC-C---CcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 217 ED-AREVIGYLHHEYP-K---APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 217 ~D-l~~~l~~l~~~~~-~---~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+= ..++-..+.+.++ . ++-.++||||||.=++++|..+++ +++.+.+.++..+.
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--~f~~~sS~Sg~~~~ 189 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--RFKSASSFSGILSP 189 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--hhceeccccccccc
Confidence 11 1233334445555 1 268999999999999999999997 89999999887665
No 180
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.61 E-value=0.0023 Score=64.28 Aligned_cols=93 Identities=12% Similarity=0.005 Sum_probs=62.4
Q ss_pred HHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcc--cCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 015544 178 IRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY--NAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG 255 (405)
Q Consensus 178 ~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~--~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~ 255 (405)
+..+++.|.+.||. -.|++|..--=..++... ..++...++..|+.+.+...+.|++++||||||.++..++....
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~ 235 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVE 235 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhcc
Confidence 37899999999996 355554321000011000 12344678899998887776789999999999999998876321
Q ss_pred ----------C---CCCceEEEEEcCCCCh
Q 015544 256 ----------E---KTPVAGAAAICSPWDL 272 (405)
Q Consensus 256 ----------~---~~~v~~~v~i~~~~~~ 272 (405)
. +..|++.|.|++|+.-
T Consensus 236 ~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 236 APAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred ccccccCCcchHHHHHHHHHheecccccCC
Confidence 0 1158999999998743
No 181
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.59 E-value=0.0046 Score=55.98 Aligned_cols=53 Identities=13% Similarity=0.173 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC---CCCceEEEEEcCCC
Q 015544 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPW 270 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~---~~~v~~~v~i~~~~ 270 (405)
+++...+..+.+++|..++++.||||||.+|..++..... ...+. ++..++|.
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~-~~tFg~P~ 167 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVT-VYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceE-EEEeCCCC
Confidence 4566666777778899999999999999999877765332 11344 55555543
No 182
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.47 E-value=0.015 Score=55.68 Aligned_cols=107 Identities=21% Similarity=0.271 Sum_probs=72.9
Q ss_pred CcEEEEeCCCCCCCccHHHHH--HHHHHh-hCCCeEEEEeCCCCCCCCCCCCCccc----------CCChhHHHHHHHHH
Q 015544 160 TPIAIVIPGLTSDSAASYIRH--LVFNTA-KRGWNVVVSNHRGLGGVSITSDCFYN----------AGWTEDAREVIGYL 226 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~--~~~~l~-~~Gy~vv~~d~rG~G~s~~~~~~~~~----------~~~~~Dl~~~l~~l 226 (405)
.| |++--|-.|+ -+++... ++..++ +.+--+|-..+|=+|.|-.-..+.+. ..-..|..+.+.++
T Consensus 81 gP-IffYtGNEGd-ie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 81 GP-IFFYTGNEGD-IEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred Cc-eEEEeCCccc-HHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 45 6677786664 2322221 222233 44678999999999988532222111 11236999999999
Q ss_pred HHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 227 HHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 227 ~~~~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
+.... ..+++++|.|.||+++..+=.++|. -+.|+.+-+.|.
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH--iv~GAlAaSAPv 202 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH--IVLGALAASAPV 202 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChh--hhhhhhhccCce
Confidence 88753 6789999999999999988888888 678887777654
No 183
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.39 E-value=0.0022 Score=62.41 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhhCCCe------EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHH
Q 015544 176 SYIRHLVFNTAKRGWN------VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVK 249 (405)
Q Consensus 176 ~y~~~~~~~l~~~Gy~------vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~ 249 (405)
+|+..+++.+..-||. -+.+|+|= |...+.+. ......++..++...+.++..|++++||||||.+...
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~e~r--d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNSEER--DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCChhHH--HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 5678888888888886 45567662 11111110 1123678888998888888889999999999999999
Q ss_pred HHhhcCCC------CCceEEEEEcCCCCh
Q 015544 250 YLGEEGEK------TPVAGAAAICSPWDL 272 (405)
Q Consensus 250 yl~~~~~~------~~v~~~v~i~~~~~~ 272 (405)
++..+++. ..+++.+.++.|+-.
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchhcC
Confidence 99887763 147788888877643
No 184
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.38 E-value=0.069 Score=46.08 Aligned_cols=110 Identities=18% Similarity=0.151 Sum_probs=65.9
Q ss_pred CCcEEEEeCCCCCCCccH---HHH---HHHHHH------hhCCCeEEEEeCCCCCCCCCCCCCcccC----CChhHHHHH
Q 015544 159 TTPIAIVIPGLTSDSAAS---YIR---HLVFNT------AKRGWNVVVSNHRGLGGVSITSDCFYNA----GWTEDAREV 222 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~---y~~---~~~~~l------~~~Gy~vv~~d~rG~G~s~~~~~~~~~~----~~~~Dl~~~ 222 (405)
..-+.+++||...+-... +.+ .+...+ ...+=+|.++-+.|+--=.......... .-..++..+
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f 97 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARF 97 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHH
Confidence 445788999986433221 111 122211 1123367777776652110000111111 112578888
Q ss_pred HHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 223 IGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 223 l~~l~~~~-~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
++-|+... +..++.++|||+|+.++-..+...+. .++.+|.+++|-
T Consensus 98 ~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~--~vddvv~~GSPG 144 (177)
T PF06259_consen 98 LDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL--RVDDVVLVGSPG 144 (177)
T ss_pred HHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC--CcccEEEECCCC
Confidence 88888777 77899999999999998877766344 688999998763
No 185
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.33 E-value=0.0075 Score=52.39 Aligned_cols=55 Identities=18% Similarity=0.244 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC----CCCceEEEEEcCCCC
Q 015544 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE----KTPVAGAAAICSPWD 271 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~----~~~v~~~v~i~~~~~ 271 (405)
.++...++....+-|+++++++|+|.||.++...+...+. ..+|.++++++.|..
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 5777777777788899999999999999999999877111 116999999998755
No 186
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.28 E-value=0.0042 Score=62.08 Aligned_cols=160 Identities=18% Similarity=0.042 Sum_probs=99.3
Q ss_pred CCcccHHhHhhhhhCC-CCCCCcceEEEEcCCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHH
Q 015544 99 LSSPHIQTAFLHFFGR-PPCFSYRRQLFRLSDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASY 177 (405)
Q Consensus 99 ~~~~~~qt~~~~~~~~-~~~~~~~r~~~~~~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y 177 (405)
+..+.++++-...... .....-+...-+..||..|.+-... .+. ..++.|++|.--|...-+....
T Consensus 372 ~~~~eLe~ik~~p~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~------------~~d~~pTll~aYGGF~vsltP~ 438 (648)
T COG1505 372 LFGGELEVIREQPVQFDADNYEVEQFFATSKDGTRIPYFIVR-KGA------------KKDENPTLLYAYGGFNISLTPR 438 (648)
T ss_pred cCCceehhhhhccCCcCccCceEEEEEEEcCCCccccEEEEe-cCC------------cCCCCceEEEeccccccccCCc
Confidence 4444566654333222 1223333444566799988876554 221 1236788866665333333322
Q ss_pred HHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCC----cccCCChhHHHHHHHHHHHhC--CCCcEEEEEEcHHHHHHHHHH
Q 015544 178 IRHLVFNTAKRGWNVVVSNHRGLGGVSITSDC----FYNAGWTEDAREVIGYLHHEY--PKAPLFAIGTSIGANILVKYL 251 (405)
Q Consensus 178 ~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~----~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvG~S~GG~ia~~yl 251 (405)
.........++|..-+.-|.||-|.-.....+ .-...-.+|+.++.+.+.++. ...++.+.|-|=||.++...+
T Consensus 439 fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~al 518 (648)
T COG1505 439 FSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAAL 518 (648)
T ss_pred cchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeee
Confidence 23444777788999999999997754321110 011122489999999998774 244799999999999988888
Q ss_pred hhcCCCCCceEEEEEcCCCChh
Q 015544 252 GEEGEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 252 ~~~~~~~~v~~~v~i~~~~~~~ 273 (405)
..+|+ .+.++|+-.|-.|+.
T Consensus 519 TQrPe--lfgA~v~evPllDMl 538 (648)
T COG1505 519 TQRPE--LFGAAVCEVPLLDML 538 (648)
T ss_pred ccChh--hhCceeeccchhhhh
Confidence 88888 677777666666663
No 187
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.21 E-value=0.011 Score=53.18 Aligned_cols=53 Identities=15% Similarity=0.271 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC--CCCceEEEEEcCCC
Q 015544 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE--KTPVAGAAAICSPW 270 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~--~~~v~~~v~i~~~~ 270 (405)
....+.++.+.+.++. ++.+.|||.||++|...+....+ ..+|..+.+.++|-
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3455556666666766 59999999999999987776432 23799999888764
No 188
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.16 E-value=0.041 Score=54.35 Aligned_cols=136 Identities=18% Similarity=0.218 Sum_probs=78.3
Q ss_pred eEEEEcC--CCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHH---------------
Q 015544 122 RQLFRLS--DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFN--------------- 184 (405)
Q Consensus 122 r~~~~~~--dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~--------------- 184 (405)
.-.+... .+..+.+ |+..+.. ...++|+||.+.|.+|+|.. + ..+.+.
T Consensus 13 sGyl~~~~~~~~~lfy-w~~~s~~------------~~~~~Pl~~wlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~l~~ 77 (415)
T PF00450_consen 13 SGYLPVNDNENAHLFY-WFFESRN------------DPEDDPLILWLNGGPGCSSM-W-GLFGENGPFRINPDGPYTLED 77 (415)
T ss_dssp EEEEEECTTTTEEEEE-EEEE-SS------------GGCSS-EEEEEE-TTTB-TH-H-HHHCTTSSEEEETTSTSEEEE
T ss_pred EEEEecCCCCCcEEEE-EEEEeCC------------CCCCccEEEEecCCceeccc-c-ccccccCceEEeecccccccc
Confidence 3455665 4555554 4444331 34678999999999987653 2 222210
Q ss_pred ----HhhCCCeEEEEeCC-CCCCCCCCCCCcccCC---ChhHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhh
Q 015544 185 ----TAKRGWNVVVSNHR-GLGGVSITSDCFYNAG---WTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 185 ----l~~~Gy~vv~~d~r-G~G~s~~~~~~~~~~~---~~~Dl~~~l~~l~~~~~---~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
..+ -.+++-+|.| |.|-|-...+..+..+ ..+|+.+++...-.++| ..++++.|-|.||..+-.++.+
T Consensus 78 n~~sW~~-~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 78 NPYSWNK-FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp -TT-GGG-TSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred ccccccc-ccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 111 3688999954 8898865544432222 23566666666666676 4599999999999976655432
Q ss_pred ---cCC-----CCCceEEEEEcCCCChh
Q 015544 254 ---EGE-----KTPVAGAAAICSPWDLL 273 (405)
Q Consensus 254 ---~~~-----~~~v~~~v~i~~~~~~~ 273 (405)
... ...++|+++.++-.+..
T Consensus 157 i~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 157 ILQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred hhhccccccccccccccceecCcccccc
Confidence 222 23689988877766654
No 189
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.99 E-value=0.016 Score=53.43 Aligned_cols=107 Identities=19% Similarity=0.227 Sum_probs=48.8
Q ss_pred CCcEEEEeCCCCCCCc-cHHHHHHHHHHhhC--CCeEEEEeCCCCCCCCCCCCCcccCCCh-hHHHHHHHHHHHhCC--C
Q 015544 159 TTPIAIVIPGLTSDSA-ASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNAGWT-EDAREVIGYLHHEYP--K 232 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~-~~y~~~~~~~l~~~--Gy~vv~~d~rG~G~s~~~~~~~~~~~~~-~Dl~~~l~~l~~~~~--~ 232 (405)
.+| ||+.||++.+.. ..-+..+.+.+.+. |--|..++. |-+.++.... .+ .+.. +.+..+.+.++. -| .
T Consensus 5 ~~P-vViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~-s~-f~~v~~Qv~~vc~~l~~-~p~L~ 79 (279)
T PF02089_consen 5 PLP-VVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVEN-SF-FGNVNDQVEQVCEQLAN-DPELA 79 (279)
T ss_dssp S---EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHH-HH-HSHHHHHHHHHHHHHHH--GGGT
T ss_pred CCc-EEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhh-hH-HHHHHHHHHHHHHHHhh-Chhhh
Confidence 445 679999964321 11234454444442 555555544 2211100000 00 0112 223333333332 12 1
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 233 ~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
.=+.++|+|.||.++-.++.+.+.. +|+-.|++++|..
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~-~V~nlISlggph~ 117 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDP-PVHNLISLGGPHM 117 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS--EEEEEEES--TT
T ss_pred cceeeeeeccccHHHHHHHHHCCCC-CceeEEEecCccc
Confidence 2499999999999999999888753 7999999998653
No 190
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.90 E-value=0.06 Score=52.97 Aligned_cols=111 Identities=19% Similarity=0.185 Sum_probs=80.1
Q ss_pred CCCcEEEEeCCCCCCCccHHHH----HHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcc------c-CCChhHHHHHHHHH
Q 015544 158 DTTPIAIVIPGLTSDSAASYIR----HLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY------N-AGWTEDAREVIGYL 226 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~----~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~------~-~~~~~Dl~~~l~~l 226 (405)
++.|+.++|-|= |.....|+. .....+.+.|-.|+.+.||=+|.|....+... + .....|+.++|+.+
T Consensus 84 ~~gPiFLmIGGE-gp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGE-GPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCC-CCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 567888888773 322211211 35566677799999999999998754322111 1 12236999999999
Q ss_pred HHhCC---CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 227 HHEYP---KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 227 ~~~~~---~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
..+++ ..|.+..|.|.-|.++...=..+|+ .+.|+|+-+.|..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe--l~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE--LTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCch--hheeeccccccee
Confidence 99885 2389999999999999988888999 7888888887763
No 191
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.90 E-value=0.028 Score=52.17 Aligned_cols=95 Identities=19% Similarity=0.193 Sum_probs=52.1
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC----------CCCCCCCCCCCCcccCCChhHHHHHHHH--
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH----------RGLGGVSITSDCFYNAGWTEDAREVIGY-- 225 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~----------rG~G~s~~~~~~~~~~~~~~Dl~~~l~~-- 225 (405)
...|.+++.||+++.... . ......++..++++...+. +|++.+..............+...++..
T Consensus 47 ~~~p~v~~~h~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQ-S-LGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDY 124 (299)
T ss_pred ccCceEEeccCccccccC-c-chHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHH
Confidence 467899999999765444 2 2367777788888888775 2222221111111100000111111111
Q ss_pred -HHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 015544 226 -LHHEYPKAPLFAIGTSIGANILVKYLGEEG 255 (405)
Q Consensus 226 -l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~ 255 (405)
..... ..+....|.++|+..+..++...+
T Consensus 125 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 125 RLLGAS-LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHHhhh-cCcceEEEEEeeccchHHHhhcch
Confidence 11111 257889999999999888887765
No 192
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.83 E-value=0.39 Score=43.90 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=35.3
Q ss_pred HHHHhCC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 225 YLHHEYP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 225 ~l~~~~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
++.++|+ .++-.++|||+||.+++..+..+|+ .+.+..+++|.
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~--~F~~y~~~SPS 171 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD--CFGRYGLISPS 171 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcc--hhceeeeecch
Confidence 4455564 4468999999999999999999988 78888888874
No 193
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=95.78 E-value=0.071 Score=46.59 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=57.8
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCC-----CCC----CCcccCCC--hhHHHH-------
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS-----ITS----DCFYNAGW--TEDARE------- 221 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~-----~~~----~~~~~~~~--~~Dl~~------- 221 (405)
+-+||++||+ |++...+ ..+++.+.-...+-+++..+-.--+. .+. ...-..++ .+.+..
T Consensus 3 ~atIi~LHgl-GDsg~~~-~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 3 TATIIFLHGL-GDSGSGW-AQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred eEEEEEEecC-CCCCccH-HHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 3579999998 5666666 45555565566777777554322111 110 00000111 122222
Q ss_pred HHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEc
Q 015544 222 VIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (405)
Q Consensus 222 ~l~~l~~~-~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~ 267 (405)
++++..+. -+.++|.+-|+|+||.+++..+..++. .+.+.+..+
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~--~l~G~~~~s 125 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPK--ALGGIFALS 125 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhcccc--ccceeeccc
Confidence 33322222 145689999999999999988777754 466655443
No 194
>COG3150 Predicted esterase [General function prediction only]
Probab=95.77 E-value=0.097 Score=44.10 Aligned_cols=50 Identities=14% Similarity=0.044 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 216 TEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 216 ~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
..++.+-++.+..+.......++|-|+||..+..+....+- + +|+++|..
T Consensus 42 p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~Gi----r-av~~NPav 91 (191)
T COG3150 42 PQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCGI----R-AVVFNPAV 91 (191)
T ss_pred HHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhCC----h-hhhcCCCc
Confidence 35566666666667766668999999999999988877753 3 45566643
No 195
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.77 E-value=0.027 Score=49.67 Aligned_cols=85 Identities=22% Similarity=0.181 Sum_probs=52.5
Q ss_pred HHhhCCCeEEEEeCCCCCC-CCC-CC-C--CcccCCChhHHHHHHHHHHHhCC-CCcEEEEEEcHHHHHHHHHHhhcCC-
Q 015544 184 NTAKRGWNVVVSNHRGLGG-VSI-TS-D--CFYNAGWTEDAREVIGYLHHEYP-KAPLFAIGTSIGANILVKYLGEEGE- 256 (405)
Q Consensus 184 ~l~~~Gy~vv~~d~rG~G~-s~~-~~-~--~~~~~~~~~Dl~~~l~~l~~~~~-~~~i~lvG~S~GG~ia~~yl~~~~~- 256 (405)
.+... .+|+++=+|=... +-. .. + ......-..|+.++.++-.++++ ..|++++|||.|+.++.+++.++-+
T Consensus 41 ~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~ 119 (207)
T PF11288_consen 41 AFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAG 119 (207)
T ss_pred hhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcC
Confidence 34433 5888888884221 111 00 0 00011113699999988777664 5699999999999999999987622
Q ss_pred ---CCCceEEEEEcCC
Q 015544 257 ---KTPVAGAAAICSP 269 (405)
Q Consensus 257 ---~~~v~~~v~i~~~ 269 (405)
..++-++-+++-+
T Consensus 120 ~pl~~rLVAAYliG~~ 135 (207)
T PF11288_consen 120 DPLRKRLVAAYLIGYP 135 (207)
T ss_pred chHHhhhheeeecCcc
Confidence 1246666666544
No 196
>PLN02454 triacylglycerol lipase
Probab=95.76 E-value=0.023 Score=55.29 Aligned_cols=37 Identities=19% Similarity=0.201 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHhCCCCc--EEEEEEcHHHHHHHHHHhh
Q 015544 217 EDAREVIGYLHHEYPKAP--LFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~--i~lvG~S~GG~ia~~yl~~ 253 (405)
+++.+.++.+.++|+..+ |++.||||||.+|+..+..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 577778888888898765 9999999999999987754
No 197
>PLN00413 triacylglycerol lipase
Probab=95.69 E-value=0.029 Score=55.31 Aligned_cols=53 Identities=13% Similarity=0.267 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh---cCC---CCCceEEEEEcCCC
Q 015544 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGE---KTPVAGAAAICSPW 270 (405)
Q Consensus 218 Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~---~~~---~~~v~~~v~i~~~~ 270 (405)
++.+.++.+.+++|+.++++.|||+||++|...+.. +.+ ..++.++...++|-
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 566777777788999999999999999999977643 111 11456677777764
No 198
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.63 E-value=0.33 Score=43.15 Aligned_cols=76 Identities=20% Similarity=0.273 Sum_probs=47.2
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHH-hhCCCe-EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEE
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNT-AKRGWN-VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l-~~~Gy~-vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~l 237 (405)
...||+..|++.+ .+ ....| ...++. ++++|+|..-- + .| + ..| ..+.+
T Consensus 11 ~~LilfF~GWg~d-~~-----~f~hL~~~~~~D~l~~yDYr~l~~-----d--------~~-------~-~~y--~~i~l 61 (213)
T PF04301_consen 11 KELILFFAGWGMD-PS-----PFSHLILPENYDVLICYDYRDLDF-----D--------FD-------L-SGY--REIYL 61 (213)
T ss_pred CeEEEEEecCCCC-hH-----HhhhccCCCCccEEEEecCccccc-----c--------cc-------c-ccC--ceEEE
Confidence 4689999999532 22 22333 234554 55678874321 0 01 1 223 47999
Q ss_pred EEEcHHHHHHHHHHhhcCCCCCceEEEEEcC
Q 015544 238 IGTSIGANILVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 238 vG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~ 268 (405)
||+|||-..|.+++... +++.+++|++
T Consensus 62 vAWSmGVw~A~~~l~~~----~~~~aiAING 88 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGI----PFKRAIAING 88 (213)
T ss_pred EEEeHHHHHHHHHhccC----CcceeEEEEC
Confidence 99999999988876543 4777788876
No 199
>PLN02162 triacylglycerol lipase
Probab=95.63 E-value=0.031 Score=54.92 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHh---hcCCC---CCceEEEEEcCCC
Q 015544 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLG---EEGEK---TPVAGAAAICSPW 270 (405)
Q Consensus 218 Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~---~~~~~---~~v~~~v~i~~~~ 270 (405)
.+.+.++.+..++|+.++++.|||+||.+|+..+. .++.. .++.+++..++|-
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 45666666667788889999999999999987654 22221 1355677777764
No 200
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.55 E-value=0.069 Score=48.25 Aligned_cols=117 Identities=18% Similarity=0.184 Sum_probs=67.0
Q ss_pred CCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHH--HHHHHHhhCCCeEEEEeCCCCCCCCCCC
Q 015544 130 GGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIR--HLVFNTAKRGWNVVVSNHRGLGGVSITS 207 (405)
Q Consensus 130 g~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~--~~~~~l~~~Gy~vv~~d~rG~G~s~~~~ 207 (405)
-++..+.|+.|+. ..|+-+.+-|. |+. . |-+ .+...+.++|...+++..+=+|......
T Consensus 99 ~~~A~~~~liPQK----------------~~~KOG~~a~t-gdh-~-y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~ 159 (371)
T KOG1551|consen 99 SRTARVAWLIPQK----------------MADLCLSWALT-GDH-V-YTRRLVLSKPINKREIATMVLEKPFYGQRVPEE 159 (371)
T ss_pred ccceeeeeecccC----------------cCCeeEEEeec-CCc-e-eEeeeeecCchhhhcchheeeecccccccCCHH
Confidence 3566778887754 33555555553 432 2 223 3566788889999999999888754321
Q ss_pred CCcccCCChhHHH----HHHHHHHHhC------CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEc
Q 015544 208 DCFYNAGWTEDAR----EVIGYLHHEY------PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (405)
Q Consensus 208 ~~~~~~~~~~Dl~----~~l~~l~~~~------~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~ 267 (405)
.....-.+..|+- +.|+...+.+ +-.++.++|-||||-++......++. +|.-+=+++
T Consensus 160 q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~--Pva~~p~l~ 227 (371)
T KOG1551|consen 160 QIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQK--PVATAPCLN 227 (371)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCC--Ccccccccc
Confidence 1110011122322 2222222222 34589999999999998877666665 454444443
No 201
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=95.51 E-value=0.029 Score=51.10 Aligned_cols=56 Identities=27% Similarity=0.382 Sum_probs=42.4
Q ss_pred ChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhh
Q 015544 215 WTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (405)
Q Consensus 215 ~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~ 275 (405)
...+..+++..+++.||+++|.+.|||+||.+|..+-.+++- + +|+..+|-|...+
T Consensus 258 yySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl--P---~VaFesPGd~~aa 313 (425)
T KOG4540|consen 258 YYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL--P---VVAFESPGDAYAA 313 (425)
T ss_pred hhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC--c---eEEecCchhhhhh
Confidence 345677788888999999999999999999998766656654 1 5566666665433
No 202
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=95.51 E-value=0.029 Score=51.10 Aligned_cols=56 Identities=27% Similarity=0.382 Sum_probs=42.4
Q ss_pred ChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCChhhh
Q 015544 215 WTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDLLIG 275 (405)
Q Consensus 215 ~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~~~~ 275 (405)
...+..+++..+++.||+++|.+.|||+||.+|..+-.+++- + +|+..+|-|...+
T Consensus 258 yySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl--P---~VaFesPGd~~aa 313 (425)
T COG5153 258 YYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL--P---VVAFESPGDAYAA 313 (425)
T ss_pred hhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC--c---eEEecCchhhhhh
Confidence 345677788888999999999999999999998766656654 1 5566666665433
No 203
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.29 E-value=0.049 Score=45.92 Aligned_cols=49 Identities=18% Similarity=0.252 Sum_probs=39.4
Q ss_pred HHHHHHHHh-CCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 221 EVIGYLHHE-YPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 221 ~~l~~l~~~-~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+.-.|+.++ .|. ...+-|.||||..+.++.-++|+ .+.++|++++.+|.
T Consensus 89 AyerYv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~--lftkvialSGvYda 138 (227)
T COG4947 89 AYERYVIEEALPG-STIVSGCSMGAYHAANFVFRHPH--LFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHhhcCC-CccccccchhhhhhhhhheeChh--HhhhheeecceeeH
Confidence 333455544 454 46789999999999999999999 89999999998887
No 204
>PLN02934 triacylglycerol lipase
Probab=95.28 E-value=0.045 Score=54.37 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh---cCCC---CCceEEEEEcCCC
Q 015544 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGEK---TPVAGAAAICSPW 270 (405)
Q Consensus 218 Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~---~~~~---~~v~~~v~i~~~~ 270 (405)
.+...++.+.+++|+.++++.|||+||.+|...+.. ..+. .++..++..++|-
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPR 364 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPR 364 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCC
Confidence 577778888889999999999999999999977643 1111 1234566666654
No 205
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.26 E-value=0.34 Score=48.23 Aligned_cols=115 Identities=15% Similarity=0.071 Sum_probs=67.2
Q ss_pred CCCCcEEEEeCCCCCCCccH-HHHHHHH-------------HHh------hCCCeEEEEe-CCCCCCCCCCCCCcccC--
Q 015544 157 DDTTPIAIVIPGLTSDSAAS-YIRHLVF-------------NTA------KRGWNVVVSN-HRGLGGVSITSDCFYNA-- 213 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~-y~~~~~~-------------~l~------~~Gy~vv~~d-~rG~G~s~~~~~~~~~~-- 213 (405)
..++|+|+.+-|.+|+|... ....... .+. .+-.+++.+| .-|.|-|-...+.....
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~ 142 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDI 142 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 35789999999999876521 0010000 010 0126888999 55788875433322211
Q ss_pred CChhHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhc---C-----CCCCceEEEEEcCCCC
Q 015544 214 GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEE---G-----EKTPVAGAAAICSPWD 271 (405)
Q Consensus 214 ~~~~Dl~~~l~~l~~~~~---~~~i~lvG~S~GG~ia~~yl~~~---~-----~~~~v~~~v~i~~~~~ 271 (405)
...+|+.+++...-+++| ..++++.|.|.||..+-.++.+- . ..-.++|+++-++..+
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 112466666665555665 46899999999998766655431 1 1125788776665433
No 206
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.09 E-value=0.05 Score=50.33 Aligned_cols=110 Identities=14% Similarity=0.094 Sum_probs=66.2
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCC----CeEEEEeCCCCCCCCCCCCCcccC-CChhH-HHHHHHHHHHhC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG----WNVVVSNHRGLGGVSITSDCFYNA-GWTED-AREVIGYLHHEY 230 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~G----y~vv~~d~rG~G~s~~~~~~~~~~-~~~~D-l~~~l~~l~~~~ 230 (405)
..+.|++++.||-.-..... +....+.+...| -.+|.+|. .........+++. +..+. ..+++-++.++|
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~-i~~~~dsli~~g~i~pai~vgid~---~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~y 170 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGR-IPRILDSLIAAGEIPPAILVGIDY---IDVKKRREELHCNEAYWRFLAQELLPYVEERY 170 (299)
T ss_pred cccccEEEEeccHHHHhcCC-hHHHHHHHHHcCCCCCceEEecCC---CCHHHHHHHhcccHHHHHHHHHHhhhhhhccC
Confidence 46789999999942111111 234555555543 33444433 2222111222221 12222 336667888888
Q ss_pred CC----CcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 231 PK----APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 231 ~~----~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
|. ..-+++|-|+||.+++..+..+|+ .+-.+++.|+.++-
T Consensus 171 p~~~~a~~r~L~G~SlGG~vsL~agl~~Pe--~FG~V~s~Sps~~~ 214 (299)
T COG2382 171 PTSADADGRVLAGDSLGGLVSLYAGLRHPE--RFGHVLSQSGSFWW 214 (299)
T ss_pred cccccCCCcEEeccccccHHHHHHHhcCch--hhceeeccCCcccc
Confidence 73 346899999999999999999999 78888888775443
No 207
>PLN02209 serine carboxypeptidase
Probab=94.73 E-value=0.59 Score=46.54 Aligned_cols=114 Identities=13% Similarity=0.105 Sum_probs=67.7
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHH----------------HHh------hCCCeEEEEe-CCCCCCCCCCCCCcccC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVF----------------NTA------KRGWNVVVSN-HRGLGGVSITSDCFYNA 213 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~----------------~l~------~~Gy~vv~~d-~rG~G~s~~~~~~~~~~ 213 (405)
.+++|+++.+-|.+|+|.. + ..+.+ .+. .+-.+++-+| .-|.|-|-...+..+..
T Consensus 65 ~~~~Pl~lWlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~ 142 (437)
T PLN02209 65 PQEDPLIIWLNGGPGCSCL-S-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTS 142 (437)
T ss_pred CCCCCEEEEECCCCcHHHh-h-hHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccC
Confidence 3568999999999987643 2 11111 010 0125788888 45788774333222111
Q ss_pred --CChhHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhc---C-----CCCCceEEEEEcCCCCh
Q 015544 214 --GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEE---G-----EKTPVAGAAAICSPWDL 272 (405)
Q Consensus 214 --~~~~Dl~~~l~~l~~~~~---~~~i~lvG~S~GG~ia~~yl~~~---~-----~~~~v~~~v~i~~~~~~ 272 (405)
...+|+.+++...-+++| ..++++.|.|.||.-+-.++.+- . ..-.++|+++.++-.|.
T Consensus 143 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 143 DTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred CHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 122456666665555666 46899999999998766655432 1 11257888877765543
No 208
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=94.58 E-value=0.099 Score=50.18 Aligned_cols=81 Identities=19% Similarity=0.169 Sum_probs=57.6
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEc
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S 241 (405)
.-||+-|=+| ....-+.+.+.|+++|+.||-+|---+=-++.+ | ....+|+..++++-..+....++.++|+|
T Consensus 262 ~av~~SGDGG--Wr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rt-P----e~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGG--WRDLDKEVAEALQKQGVPVVGVDSLRYFWSERT-P----EQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCc--hhhhhHHHHHHHHHCCCceeeeehhhhhhccCC-H----HHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 4566676433 222346788999999999999985422222211 1 12347999999999888888899999999
Q ss_pred HHHHHHHH
Q 015544 242 IGANILVK 249 (405)
Q Consensus 242 ~GG~ia~~ 249 (405)
+|+-+.-.
T Consensus 335 fGADvlP~ 342 (456)
T COG3946 335 FGADVLPF 342 (456)
T ss_pred ccchhhHH
Confidence 99988643
No 209
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.50 E-value=0.073 Score=51.16 Aligned_cols=85 Identities=15% Similarity=0.189 Sum_probs=47.4
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhC--CCeEEEEeCCCCCCCCCCCCCcccC--CChhHHHHHHHHHHHhCCCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKR--GWNVVVSNHRGLGGVSITSDCFYNA--GWTEDAREVIGYLHHEYPKA 233 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~--Gy~vv~~d~rG~G~s~~~~~~~~~~--~~~~Dl~~~l~~l~~~~~~~ 233 (405)
...-.||+.||+.| .+..|+...+...++. +..++....+| ....+-...... +..+++.+.+.... -.
T Consensus 78 k~~HLvVlthGi~~-~~~~~~~~~~~~~~kk~p~~~iv~~g~~~--~~~~T~~Gv~~lG~Rla~~~~e~~~~~s----i~ 150 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHG-ADMEYWKEKIEQMTKKMPDKLIVVRGKMN--NMCQTFDGVDVLGERLAEEVKETLYDYS----IE 150 (405)
T ss_pred CCceEEEecccccc-ccHHHHHHHHHhhhcCCCcceEeeecccc--chhhccccceeeecccHHHHhhhhhccc----cc
Confidence 34458999999988 4455656666666654 44333333332 222232332222 22334333322221 35
Q ss_pred cEEEEEEcHHHHHHHH
Q 015544 234 PLFAIGTSIGANILVK 249 (405)
Q Consensus 234 ~i~lvG~S~GG~ia~~ 249 (405)
+|-.+|||+||.++..
T Consensus 151 kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARY 166 (405)
T ss_pred eeeeeeeecCCeeeeE
Confidence 8999999999988653
No 210
>PLN02408 phospholipase A1
Probab=94.42 E-value=0.064 Score=51.53 Aligned_cols=53 Identities=25% Similarity=0.322 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhhcCC---CCCceEEEEEcCC
Q 015544 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSP 269 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~--~i~lvG~S~GG~ia~~yl~~~~~---~~~v~~~v~i~~~ 269 (405)
+++.+.+..+.++|++. +|++.|||+||.+|+..+..... +.+...++..++|
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsP 239 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGP 239 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCC
Confidence 45667777777888754 59999999999999977655322 1122335555554
No 211
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.41 E-value=0.075 Score=54.69 Aligned_cols=109 Identities=20% Similarity=0.125 Sum_probs=64.8
Q ss_pred CcEEEEeCCCCC--CCccHH-HHHHHHHHhhCCCeEEEEeCCC--CCC-CCCCCCCcccCCChhHHHHHHHHHHHhC---
Q 015544 160 TPIAIVIPGLTS--DSAASY-IRHLVFNTAKRGWNVVVSNHRG--LGG-VSITSDCFYNAGWTEDAREVIGYLHHEY--- 230 (405)
Q Consensus 160 ~P~VvllHG~~g--~s~~~y-~~~~~~~l~~~Gy~vv~~d~rG--~G~-s~~~~~~~~~~~~~~Dl~~~l~~l~~~~--- 230 (405)
.|++|++||..- ++...+ .......+..+..-||.+++|= .|- +........+.+ ..|...+++++++.-
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g-l~Dq~~AL~wv~~~I~~F 190 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG-LFDQLLALRWVKDNIPSF 190 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc-HHHHHHHHHHHHHHHHhc
Confidence 899999999431 121111 1233334445567889999982 331 111111112222 259999999998753
Q ss_pred C--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCC
Q 015544 231 P--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 231 ~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
+ ..++.++|||.||..+.........+..+..+|..++.
T Consensus 191 GGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 191 GGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 2 45899999999999986554432222256677777654
No 212
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.30 E-value=0.072 Score=51.36 Aligned_cols=108 Identities=19% Similarity=0.186 Sum_probs=81.1
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCccc----CCChhHHHHHHHHHHHhCCC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN----AGWTEDAREVIGYLHHEYPK 232 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~----~~~~~Dl~~~l~~l~~~~~~ 232 (405)
+.++|+|+.--|..- +....-......+ +-+-+.+.+|=+|.|..... .+. ..-++|.+.+++.++..|+.
T Consensus 60 ~~drPtV~~T~GY~~-~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~-DW~~Lti~QAA~D~Hri~~A~K~iY~~ 134 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNV-STSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPA-DWSYLTIWQAASDQHRIVQAFKPIYPG 134 (448)
T ss_pred CCCCCeEEEecCccc-ccCccccchhHhh---ccceEEEEEeeccCCCCCCC-CcccccHhHhhHHHHHHHHHHHhhccC
Confidence 467899999999854 3333312333333 34789999999999865432 222 22347999999999999976
Q ss_pred CcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 015544 233 APLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 233 ~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~~ 272 (405)
+.+-.|.|=||+.++.|=.-+|+ .|++.|....|.+.
T Consensus 135 -kWISTG~SKGGmTa~y~rrFyP~--DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 135 -KWISTGGSKGGMTAVYYRRFYPD--DVDGTVAYVAPNDV 171 (448)
T ss_pred -CceecCcCCCceeEEEEeeeCCC--CCCeeeeeeccccc
Confidence 79999999999999877777888 69999999988765
No 213
>PLN02571 triacylglycerol lipase
Probab=94.24 E-value=0.071 Score=51.99 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhh
Q 015544 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~--~i~lvG~S~GG~ia~~yl~~ 253 (405)
+++.+.++.+.++|++. +|++.||||||.+|+..|.+
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45666677777778754 69999999999999987764
No 214
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.14 E-value=0.078 Score=50.94 Aligned_cols=61 Identities=18% Similarity=0.309 Sum_probs=44.8
Q ss_pred cccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh---cCCC-CCceEEEEEcCCC
Q 015544 210 FYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE---EGEK-TPVAGAAAICSPW 270 (405)
Q Consensus 210 ~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~---~~~~-~~v~~~v~i~~~~ 270 (405)
.+...|...+.+.++.+..++|+-++++.|||+||.+|...+.. .+.. ..-.+++..+.|-
T Consensus 148 ~~~~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PR 212 (336)
T KOG4569|consen 148 AYTSLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPR 212 (336)
T ss_pred hhccccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCC
Confidence 34445667899999999999999999999999999999876654 2321 1345666666653
No 215
>PLN02324 triacylglycerol lipase
Probab=93.53 E-value=0.12 Score=50.42 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHhCCCC--cEEEEEEcHHHHHHHHHHhh
Q 015544 217 EDAREVIGYLHHEYPKA--PLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~--~i~lvG~S~GG~ia~~yl~~ 253 (405)
+.+.+.+..+.++|++. +|.+.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 45666677777888853 69999999999999977654
No 216
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.32 E-value=1.1 Score=44.59 Aligned_cols=134 Identities=15% Similarity=0.203 Sum_probs=77.0
Q ss_pred eEEEEcC--CCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHH-----hh-------
Q 015544 122 RQLFRLS--DGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNT-----AK------- 187 (405)
Q Consensus 122 r~~~~~~--dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l-----~~------- 187 (405)
.-.+... +|..+.+..++... ....+|+||.+-|.+|+|.- ..+..++ ..
T Consensus 46 sGYv~v~~~~~~~LFYwf~eS~~-------------~P~~dPlvLWLnGGPGCSSl---~G~~~E~GPf~v~~~G~tL~~ 109 (454)
T KOG1282|consen 46 SGYVTVNESEGRQLFYWFFESEN-------------NPETDPLVLWLNGGPGCSSL---GGLFEENGPFRVKYNGKTLYL 109 (454)
T ss_pred cceEECCCCCCceEEEEEEEccC-------------CCCCCCEEEEeCCCCCccch---hhhhhhcCCeEEcCCCCccee
Confidence 3445555 45666654443332 24568999999999998753 1222221 00
Q ss_pred ------CCCeEEEEeCC-CCCCCCCCCCCcccC---CChhHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhh-
Q 015544 188 ------RGWNVVVSNHR-GLGGVSITSDCFYNA---GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGE- 253 (405)
Q Consensus 188 ------~Gy~vv~~d~r-G~G~s~~~~~~~~~~---~~~~Dl~~~l~~l~~~~~---~~~i~lvG~S~GG~ia~~yl~~- 253 (405)
+--+++-+|.| |.|-|=-.++..+.. +-++|..+++...-+++| ..++++.|-|.+|..+-.+|.+
T Consensus 110 N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I 189 (454)
T KOG1282|consen 110 NPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEI 189 (454)
T ss_pred CCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHH
Confidence 11356666665 566553222222221 223577777766666776 5789999999999776665544
Q ss_pred ---cC--C--CCCceEEEEEcCCCC
Q 015544 254 ---EG--E--KTPVAGAAAICSPWD 271 (405)
Q Consensus 254 ---~~--~--~~~v~~~v~i~~~~~ 271 (405)
.. . .-.++|.++-++-.|
T Consensus 190 ~~~N~~~~~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 190 LKGNKKCCKPNINLKGYAIGNGLTD 214 (454)
T ss_pred HhccccccCCcccceEEEecCcccC
Confidence 11 1 125788775555443
No 217
>PLN02847 triacylglycerol lipase
Probab=93.23 E-value=0.17 Score=51.31 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh
Q 015544 218 DAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 218 Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
++...+..+.+++|+-+++++|||+||.+|..++..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 444555566677888899999999999999876543
No 218
>PLN02719 triacylglycerol lipase
Probab=92.91 E-value=0.15 Score=50.72 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHhCCC-----CcEEEEEEcHHHHHHHHHHhh
Q 015544 217 EDAREVIGYLHHEYPK-----APLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~-----~~i~lvG~S~GG~ia~~yl~~ 253 (405)
+++.+.+..+.++|++ .+|.+.|||+||.+|+..|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 5677777777788874 379999999999999976643
No 219
>PLN02802 triacylglycerol lipase
Probab=92.76 E-value=0.17 Score=50.42 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHhCCC--CcEEEEEEcHHHHHHHHHHhhc
Q 015544 217 EDAREVIGYLHHEYPK--APLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~--~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
+++.+-+..+.++|++ .+|++.|||+||.+|+..+...
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 4566666777777865 3699999999999999766543
No 220
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=92.55 E-value=0.33 Score=48.74 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=63.0
Q ss_pred CCCcEEEEeCCCC-----CCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC--
Q 015544 158 DTTPIAIVIPGLT-----SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-- 230 (405)
Q Consensus 158 ~~~P~VvllHG~~-----g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~-- 230 (405)
.++-+|+-+||.+ +-|++.|.+..+. +.|..++.+|+-=-..-+. ..-++++-.+..|+...-
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~---aL~cPiiSVdYSLAPEaPF-------PRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQ---ALGCPIISVDYSLAPEAPF-------PRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHH---HhCCCeEEeeeccCCCCCC-------CcHHHHHHHHHHHHhcCHHH
Confidence 4566889999942 2356778665554 4578999999853222221 123466666666664431
Q ss_pred ---CCCcEEEEEEcHHHHHHHHHHhh---cCCCCCceEEEEEcCCC
Q 015544 231 ---PKAPLFAIGTSIGANILVKYLGE---EGEKTPVAGAAAICSPW 270 (405)
Q Consensus 231 ---~~~~i~lvG~S~GG~ia~~yl~~---~~~~~~v~~~v~i~~~~ 270 (405)
-..+|+++|-|.|||+.+..+.+ ++-. .-+|+++.-+|.
T Consensus 464 lG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvR-vPDGl~laY~pt 508 (880)
T KOG4388|consen 464 LGSTGERIVLAGDSAGGNLCFTVALRAIAYGVR-VPDGLMLAYPPT 508 (880)
T ss_pred hCcccceEEEeccCCCcceeehhHHHHHHhCCC-CCCceEEecChh
Confidence 25689999999999987655433 2320 235666655554
No 221
>PLN02310 triacylglycerol lipase
Probab=92.23 E-value=0.16 Score=49.36 Aligned_cols=53 Identities=19% Similarity=0.217 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHhCC----CCcEEEEEEcHHHHHHHHHHhhcC---CCCCceEEEEEcCCC
Q 015544 217 EDAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGEEG---EKTPVAGAAAICSPW 270 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~----~~~i~lvG~S~GG~ia~~yl~~~~---~~~~v~~~v~i~~~~ 270 (405)
+.+.+.+..+.+.|+ ..+|.++|||+||.+|+..+.... ...++ .++..++|-
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v-~vyTFGsPR 248 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFV-SVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcce-eEEEecCCC
Confidence 445555666666553 457999999999999987665432 11123 356666654
No 222
>PLN02761 lipase class 3 family protein
Probab=92.20 E-value=0.22 Score=49.84 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHhCC------CCcEEEEEEcHHHHHHHHHHh
Q 015544 217 EDAREVIGYLHHEYP------KAPLFAIGTSIGANILVKYLG 252 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~------~~~i~lvG~S~GG~ia~~yl~ 252 (405)
+++.+.|..+.++|+ ..+|.+.|||+||.+|+..+.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 567777777777773 347999999999999997664
No 223
>PLN02753 triacylglycerol lipase
Probab=92.17 E-value=0.22 Score=49.83 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHhCC-----CCcEEEEEEcHHHHHHHHHHh
Q 015544 217 EDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKYLG 252 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~-----~~~i~lvG~S~GG~ia~~yl~ 252 (405)
+++.+.+..+.++|+ ..+|.+.|||+||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 456666777777775 358999999999999997764
No 224
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=92.03 E-value=1.2 Score=44.39 Aligned_cols=95 Identities=17% Similarity=0.138 Sum_probs=62.3
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHH-------------------HhhCCCeEEEEe-CCCCCCCCC--CCCCcccCC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFN-------------------TAKRGWNVVVSN-HRGLGGVSI--TSDCFYNAG 214 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~-------------------l~~~Gy~vv~~d-~rG~G~s~~--~~~~~~~~~ 214 (405)
..++|+++.+.|..|+|.. + ..+.+. ... --.++-+| .-|.|-|.. .....-..+
T Consensus 98 p~~rPvi~wlNGGPGcSS~-~-g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS~a~~~e~~~d~~~ 174 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSV-T-GLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFSRALGDEKKKDFEG 174 (498)
T ss_pred CCCCceEEEecCCCChHhh-h-hhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCcccccccccccchhc
Confidence 3579999999999987543 2 222110 011 12677788 557776653 212222234
Q ss_pred ChhHHHHHHHHHHHhCC-----CCcEEEEEEcHHHHHHHHHHhhc
Q 015544 215 WTEDAREVIGYLHHEYP-----KAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 215 ~~~Dl~~~l~~l~~~~~-----~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
...|+..+.+.+.+.+| .++.+++|-|.||.-+..+|.+-
T Consensus 175 ~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 175 AGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred cchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 45799999998887765 34899999999999888777653
No 225
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.30 E-value=0.22 Score=49.70 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCC----CCcEEEEEEcHHHHHHHHHHhh
Q 015544 218 DAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 218 Dl~~~l~~l~~~~~----~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
++.+.+..+.+.|+ ..+|.+.|||+||.+|+..+.+
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44455555555554 3479999999999999877654
No 226
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.72 E-value=1.7 Score=39.14 Aligned_cols=84 Identities=18% Similarity=0.178 Sum_probs=46.4
Q ss_pred CCeEEEEeCCC-CCCCCCCCCCcccCCChhHHHHHHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhcCC---CC-CceE
Q 015544 189 GWNVVVSNHRG-LGGVSITSDCFYNAGWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEEGE---KT-PVAG 262 (405)
Q Consensus 189 Gy~vv~~d~rG-~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~-~~~~i~lvG~S~GG~ia~~yl~~~~~---~~-~v~~ 262 (405)
|+++..++++. .+-........+...-.+=+..+.+.++... +..+++++|+|+||.++...+.+... .. .-..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 67788888886 2211110011111111122333333344322 56789999999999999987765422 11 2456
Q ss_pred EEEEcCCCCh
Q 015544 263 AAAICSPWDL 272 (405)
Q Consensus 263 ~v~i~~~~~~ 272 (405)
+|+++.|...
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 8888877543
No 227
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=89.15 E-value=5.6 Score=38.55 Aligned_cols=113 Identities=13% Similarity=0.192 Sum_probs=61.6
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC-ChhhhHHHHhhhhHHHHHHHHHHHhHHHHHHhhcccccc
Q 015544 231 PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW-DLLIGDRFIGRRLIQKIYDRALTIGLQDYAQLHEPRYSR 309 (405)
Q Consensus 231 ~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 309 (405)
.-.+.++.|.|==|..++..++.. + +|+|++-+.-.. ++... +... .+.|.......+..|...
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D-~--RV~aivP~Vid~LN~~~~---l~h~--y~~yG~~ws~a~~dY~~~------- 234 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVD-P--RVKAIVPIVIDVLNMKAN---LEHQ--YRSYGGNWSFAFQDYYNE------- 234 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccC-c--ceeEEeeEEEccCCcHHH---HHHH--HHHhCCCCccchhhhhHh-------
Confidence 456899999999999998777733 2 699888776432 33111 1100 001110001111111110
Q ss_pred cCCHHHHhcCCCHHHHhhhcccccCCCCCHHHHHHhCCCccccCcccCcEEEEeeCCCCcCCCCCCCh
Q 015544 310 LANWEGIKKSRSIRDFDSHATCLVGKFETVDTYYRNCSSSTYVGNVSIPLLCISSLDDPVCTVEAIPW 377 (405)
Q Consensus 310 ~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vP~Lii~g~dD~ivp~~~~~~ 377 (405)
.+.+...-.+ .....+..++..+.+++++|-++|+|..|++..++....
T Consensus 235 -----gi~~~l~tp~--------------f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~ 283 (367)
T PF10142_consen 235 -----GITQQLDTPE--------------FDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNF 283 (367)
T ss_pred -----CchhhcCCHH--------------HHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHH
Confidence 0000001111 222333345566778889999999999999999986544
No 228
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=88.53 E-value=1.8 Score=41.25 Aligned_cols=78 Identities=15% Similarity=0.166 Sum_probs=50.1
Q ss_pred eEEEEeCC-CCCCCCCCCCCcccC--CChhHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhc---C-----C
Q 015544 191 NVVVSNHR-GLGGVSITSDCFYNA--GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEE---G-----E 256 (405)
Q Consensus 191 ~vv~~d~r-G~G~s~~~~~~~~~~--~~~~Dl~~~l~~l~~~~~---~~~i~lvG~S~GG~ia~~yl~~~---~-----~ 256 (405)
+++-+|.| |.|-|-...+..+.. ...+|+..+++..-+++| ..++++.|-|.||..+-.++.+- . .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68889988 788775433322221 122677777776666776 57899999999998776655432 1 1
Q ss_pred CCCceEEEEEcC
Q 015544 257 KTPVAGAAAICS 268 (405)
Q Consensus 257 ~~~v~~~v~i~~ 268 (405)
.-.++|+++-++
T Consensus 83 ~inLkGi~IGNg 94 (319)
T PLN02213 83 PINLQGYMLGNP 94 (319)
T ss_pred ceeeeEEEeCCC
Confidence 125777765554
No 229
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=86.63 E-value=1.7 Score=41.65 Aligned_cols=43 Identities=23% Similarity=0.244 Sum_probs=33.4
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhhcCC---CCCceEEEEEcCCCChh
Q 015544 231 PKAPLFAIGTSIGANILVKYLGEEGE---KTPVAGAAAICSPWDLL 273 (405)
Q Consensus 231 ~~~~i~lvG~S~GG~ia~~yl~~~~~---~~~v~~~v~i~~~~~~~ 273 (405)
++.|+.++|||+|+-+....+.+-.+ ...|+-+++++.|....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 66789999999999998876655433 22489999999887653
No 230
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=85.90 E-value=6.3 Score=37.05 Aligned_cols=97 Identities=21% Similarity=0.325 Sum_probs=64.1
Q ss_pred CCCCcEEEEeCCCCC---CCccHHHHHHHHHHhh-CCCeEEEEeCCCCCCCCCC------------CCC-cccCCChhHH
Q 015544 157 DDTTPIAIVIPGLTS---DSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGVSIT------------SDC-FYNAGWTEDA 219 (405)
Q Consensus 157 ~~~~P~VvllHG~~g---~s~~~y~~~~~~~l~~-~Gy~vv~~d~rG~G~s~~~------------~~~-~~~~~~~~Dl 219 (405)
++.+.+|+.+-|... ...-.-+-.+...+.+ .|-+++++=-.|.|..... ... ++..+....+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 445667777777431 1110112344555655 5888999888887754211 111 2333455789
Q ss_pred HHHHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhh
Q 015544 220 REVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 220 ~~~l~~l~~~~-~~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
+.+..++...| |..+|++.|+|-|+.++-.+|+.
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 99999999888 68899999999999998877764
No 231
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=83.97 E-value=1.7 Score=35.08 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=25.0
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW 190 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy 190 (405)
.+.+|.|+-+||++|.....-.+-+++.+-+.|.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhccc
Confidence 4688999999999997665554556666666663
No 232
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=83.05 E-value=9.2 Score=35.61 Aligned_cols=41 Identities=22% Similarity=0.390 Sum_probs=33.3
Q ss_pred CChhHHHHHHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhc
Q 015544 214 GWTEDAREVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 214 ~~~~Dl~~~l~~l~~~~-~~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
+..+.+..+..++.+.| |..+|+++|+|-||.+|-.++..-
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 44578888888887776 577899999999999988777653
No 233
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=81.55 E-value=10 Score=32.62 Aligned_cols=43 Identities=14% Similarity=0.211 Sum_probs=35.6
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
...+|.+|.+-|+.|+..+.....+.+.|.++|++|+++|--.
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDn 61 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDN 61 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChh
Confidence 3467889999999987777776778888999999999999543
No 234
>PF03283 PAE: Pectinacetylesterase
Probab=78.16 E-value=3.5 Score=39.99 Aligned_cols=35 Identities=20% Similarity=0.178 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHh-CC-CCcEEEEEEcHHHHHHHHHH
Q 015544 217 EDAREVIGYLHHE-YP-KAPLFAIGTSIGANILVKYL 251 (405)
Q Consensus 217 ~Dl~~~l~~l~~~-~~-~~~i~lvG~S~GG~ia~~yl 251 (405)
.-++++++++..+ .+ .+++++.|.|.||.-++..+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 5688999999887 54 45799999999999887644
No 235
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=77.42 E-value=1.7 Score=33.81 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=25.4
Q ss_pred ccCcEEEEeeCCCCcCCCCCCChHHHhcCCcEEEEee
Q 015544 355 VSIPLLCISSLDDPVCTVEAIPWDECRSNCSIHAIVS 391 (405)
Q Consensus 355 I~vP~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~t 391 (405)
-..|+|+|+++.||+.|.+.... ..++-++..+++.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~-~~~~l~~s~lvt~ 68 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARA-MAARLPGSRLVTV 68 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHH-HHHHCCCceEEEE
Confidence 36999999999999999875432 4455555555444
No 236
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=75.74 E-value=9.2 Score=42.30 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=59.0
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC-CCCCCCCcccCCChhHHH-HHHHHHHHhCCCCc
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG-VSITSDCFYNAGWTEDAR-EVIGYLHHEYPKAP 234 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~-s~~~~~~~~~~~~~~Dl~-~~l~~l~~~~~~~~ 234 (405)
.+..|++.|+|-+.|. .... ..++..+. .|.+|. +....| .+..+++. ..|+.+++-.|..|
T Consensus 2120 ~se~~~~Ffv~pIEG~-tt~l-~~la~rle----------~PaYglQ~T~~vP----~dSies~A~~yirqirkvQP~GP 2183 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGF-TTAL-ESLASRLE----------IPAYGLQCTEAVP----LDSIESLAAYYIRQIRKVQPEGP 2183 (2376)
T ss_pred cccCCceEEEeccccc-hHHH-HHHHhhcC----------CcchhhhccccCC----cchHHHHHHHHHHHHHhcCCCCC
Confidence 3566889999999773 2222 33333322 122221 100111 12234444 45677788889999
Q ss_pred EEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 235 LFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 235 i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
.-++|+|+|+.++..++....+......++++++..
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999999998887654433455578887643
No 237
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=72.13 E-value=7.2 Score=32.92 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=32.5
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
+|.||++-|+.|+..+...+.+.+.|.+.|+.|+.+|-..
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD~ 40 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGDN 40 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCcc
Confidence 4789999999998777777888888999999999998643
No 238
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=71.72 E-value=16 Score=32.22 Aligned_cols=56 Identities=25% Similarity=0.337 Sum_probs=38.8
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCC-eEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHh
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGW-NVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE 229 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy-~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~ 229 (405)
+.+.-+|+++||....+...| ..+-.-+.++|| +|++...-|+. ++..+++++++.
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~Y-acLd~~~~~~~f~~v~v~~ve~yP----------------~~d~vi~~l~~~ 191 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAY-ACLDHVLDEYGFDNVFVAAVEGYP----------------LVDTVIEYLRKN 191 (265)
T ss_pred CcCeEEEEEecCCCccHHHHH-HHHHHHHHhcCCCceEEEEecCCC----------------cHHHHHHHHHHc
Confidence 455678999999765555555 556666778899 77777665542 366778888765
No 239
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=70.12 E-value=6.8 Score=31.05 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=17.0
Q ss_pred CCCCEEEEEeccCCCCCCCccccccccCCCCCCcEEEEeCCCCCCCcc
Q 015544 128 SDGGMIALDWLMGSTGPGDVFHANNFISKDDTTPIAIVIPGLTSDSAA 175 (405)
Q Consensus 128 ~dg~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~P~VvllHG~~g~s~~ 175 (405)
-||-.+++-..... ..+..++|++||+.|+--+
T Consensus 75 I~g~~iHFih~rs~---------------~~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 75 IDGLDIHFIHVRSK---------------RPNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp ETTEEEEEEEE--S----------------TT-EEEEEE--SS--GGG
T ss_pred EeeEEEEEEEeeCC---------------CCCCeEEEEECCCCccHHh
Confidence 36888877655432 3455678899999986433
No 240
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=69.16 E-value=24 Score=32.86 Aligned_cols=109 Identities=13% Similarity=0.169 Sum_probs=62.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAI 238 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lv 238 (405)
..|.|+++--+.|. ....++..++.+... ..|+..|+-.---.+.....+.- .+-+..+++.+.-..|+ ..++
T Consensus 102 pdPkvLivapmsGH-~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~Fdl---dDYIdyvie~~~~~Gp~--~hv~ 174 (415)
T COG4553 102 PDPKVLIVAPMSGH-YATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGHFDL---DDYIDYVIEMINFLGPD--AHVM 174 (415)
T ss_pred CCCeEEEEeccccc-HHHHHHHHHHHhccc-cceeEeeccccceeecccCCccH---HHHHHHHHHHHHHhCCC--CcEE
Confidence 35788888888774 455568888888763 57899998765444443332211 12222333333333444 4455
Q ss_pred EEcHHHHHHH---HHHhhcCCCCCceEEEEEcCCCChhh
Q 015544 239 GTSIGANILV---KYLGEEGEKTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 239 G~S~GG~ia~---~yl~~~~~~~~v~~~v~i~~~~~~~~ 274 (405)
+...-+--++ .+..+.++...-....++++|.|...
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~ 213 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARK 213 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccccc
Confidence 5444433222 23344444335678889999988654
No 241
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=68.31 E-value=41 Score=31.83 Aligned_cols=94 Identities=16% Similarity=0.245 Sum_probs=61.2
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHH--------------HHhhCCCeEEEEeCC-CCCCCCCCCCCcccCCCh---hH
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVF--------------NTAKRGWNVVVSNHR-GLGGVSITSDCFYNAGWT---ED 218 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~--------------~l~~~Gy~vv~~d~r-G~G~s~~~~~~~~~~~~~---~D 218 (405)
...+|..+.+.|..|.|...| ..+.+ .+.+ ..++.+|.| |.|-|-......|..... .|
T Consensus 28 ks~~pl~lwlqGgpGaSstG~-GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~D 104 (414)
T KOG1283|consen 28 KSERPLALWLQGGPGASSTGF-GNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALD 104 (414)
T ss_pred ccCCCeeEEecCCCCCCCcCc-cchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHH
Confidence 367899999999888776654 33322 2222 356666665 677664333334443222 47
Q ss_pred HHHHHHHHHHhC---CCCcEEEEEEcHHHHHHHHHHhh
Q 015544 219 AREVIGYLHHEY---PKAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 219 l~~~l~~l~~~~---~~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
+.++++.+-..+ ...|++++--|.||-++.+++.+
T Consensus 105 l~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 105 LVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 777777654444 36799999999999999887754
No 242
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=65.92 E-value=26 Score=33.68 Aligned_cols=89 Identities=16% Similarity=0.074 Sum_probs=55.8
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCC--CCcE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP--KAPL 235 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~--~~~i 235 (405)
..+|+| ++=||.|. .+.++........+.||.++-+-.+-+-.....+.+.. ...+....+..+.+.+. ..++
T Consensus 37 s~k~Iv-~~~gWag~-~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~---sl~~~~~~l~~L~~~~~~~~~pi 111 (350)
T KOG2521|consen 37 SEKPIV-VLLGWAGA-IDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRIL---SLSLASTRLSELLSDYNSDPCPI 111 (350)
T ss_pred ccccEE-EEeeeccc-cchhHHHHHHHHhcCCceEEEecCcccccccccccccc---hhhHHHHHHHHHhhhccCCcCce
Confidence 344655 55566664 55576778888889999999988876543222222211 12344455555555443 5688
Q ss_pred EEEEEcHHHHHHHHHH
Q 015544 236 FAIGTSIGANILVKYL 251 (405)
Q Consensus 236 ~lvG~S~GG~ia~~yl 251 (405)
...-+|+||...+...
T Consensus 112 ~fh~FS~ng~~~~~si 127 (350)
T KOG2521|consen 112 IFHVFSGNGVRLMYSI 127 (350)
T ss_pred EEEEecCCceeehHHH
Confidence 8889999999877544
No 243
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=65.51 E-value=12 Score=30.84 Aligned_cols=46 Identities=24% Similarity=0.445 Sum_probs=33.6
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSD 208 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~ 208 (405)
+|.+-|..++-....++.++..|.++||+|.++=+-+||+.....+
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d~p 47 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEIDPP 47 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccCCC
Confidence 5567777666678888999999999999999888888877655433
No 244
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=65.40 E-value=44 Score=30.27 Aligned_cols=93 Identities=17% Similarity=0.087 Sum_probs=53.1
Q ss_pred CCcEEEEeCCCCC-CCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC-CCCCCCcc-cCCChhHHHHHH------HHHHHh
Q 015544 159 TTPIAIVIPGLTS-DSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV-SITSDCFY-NAGWTEDAREVI------GYLHHE 229 (405)
Q Consensus 159 ~~P~VvllHG~~g-~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s-~~~~~~~~-~~~~~~Dl~~~l------~~l~~~ 229 (405)
..|.|++++--.. .....|++.+.+.+.+.|+.+..++...--.. -...+.++ ..|.+.-+.+.+ +.|++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 4577999997542 23456778888888899999888876521000 00112222 234333222222 223333
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHh
Q 015544 230 YPKAPLFAIGTSIGANILVKYLG 252 (405)
Q Consensus 230 ~~~~~i~lvG~S~GG~ia~~yl~ 252 (405)
+.+ -..++|.|.|++++.....
T Consensus 110 ~~~-G~~~~G~SAGAii~~~~i~ 131 (233)
T PRK05282 110 VKN-GTPYIGWSAGANVAGPTIR 131 (233)
T ss_pred HHC-CCEEEEECHHHHhhhccce
Confidence 322 3789999999999765443
No 245
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=62.39 E-value=10 Score=34.98 Aligned_cols=41 Identities=15% Similarity=0.279 Sum_probs=35.4
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
...|+||++.|+-+.....-++.+...+-.+|++|.++..+
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 35699999999988777888899999999999999998543
No 246
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=61.57 E-value=17 Score=36.43 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=33.6
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhhc---CCCCCceEEEEEcCCCChh
Q 015544 230 YPKAPLFAIGTSIGANILVKYLGEE---GEKTPVAGAAAICSPWDLL 273 (405)
Q Consensus 230 ~~~~~i~lvG~S~GG~ia~~yl~~~---~~~~~v~~~v~i~~~~~~~ 273 (405)
.+..|+.+||+|+|+-+....+.+- .+-.-|.-+++.+.|....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 4678999999999999988766532 2222588999999887654
No 247
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=60.20 E-value=51 Score=25.49 Aligned_cols=81 Identities=15% Similarity=0.136 Sum_probs=52.6
Q ss_pred HHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHH--HHHHHhhcCC
Q 015544 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANI--LVKYLGEEGE 256 (405)
Q Consensus 179 ~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~i--a~~yl~~~~~ 256 (405)
..+.+.+..+|+..-.+.+|..|.+.. ..+..+..+-=.+.++.+.+.+|+.+++++|-|--.=. -...+.++|+
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~---~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLS---GLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCcccc---ccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 556666667788888888888765421 22222222223467788889999999999998854432 2234667777
Q ss_pred CCCceEEE
Q 015544 257 KTPVAGAA 264 (405)
Q Consensus 257 ~~~v~~~v 264 (405)
+|.|+.
T Consensus 91 --~i~ai~ 96 (100)
T PF09949_consen 91 --RILAIY 96 (100)
T ss_pred --CEEEEE
Confidence 677654
No 248
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=59.93 E-value=11 Score=33.98 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=35.2
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
...|+||++.|+.+.....-++.+...+-.+|++|.++..+
T Consensus 28 ~~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 28 TGARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred cCCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 34699999999988777788899999999999999998654
No 249
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=58.50 E-value=10 Score=38.28 Aligned_cols=89 Identities=15% Similarity=0.112 Sum_probs=59.7
Q ss_pred HHHhhCCCeEEEEeCCCCCCCCCCCCCccc----------CCChhHHHHHHHHHHHhC---CCCcEEEEEEcHHHHHHHH
Q 015544 183 FNTAKRGWNVVVSNHRGLGGVSITSDCFYN----------AGWTEDAREVIGYLHHEY---PKAPLFAIGTSIGANILVK 249 (405)
Q Consensus 183 ~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~----------~~~~~Dl~~~l~~l~~~~---~~~~i~lvG~S~GG~ia~~ 249 (405)
.....+||.++.-|- ||..+.......+. ..-..+...+-+.|.+.| +...-+..|.|-||.-+++
T Consensus 53 ~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 53 ATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred chhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 345567999999986 66655331011110 111234444444554443 3457899999999999999
Q ss_pred HHhhcCCCCCceEEEEEcCCCChhh
Q 015544 250 YLGEEGEKTPVAGAAAICSPWDLLI 274 (405)
Q Consensus 250 yl~~~~~~~~v~~~v~i~~~~~~~~ 274 (405)
.|.++|+ .++|+++-+|.++...
T Consensus 132 ~AQryP~--dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 132 AAQRYPE--DFDGILAGAPAINWTH 154 (474)
T ss_pred HHHhChh--hcCeEEeCCchHHHHH
Confidence 9999999 7999999999887643
No 250
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=57.85 E-value=88 Score=27.69 Aligned_cols=87 Identities=17% Similarity=0.187 Sum_probs=51.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhC-CCeEEEEeCCCCCCCC-----CCCCCccc-CCChhHHHHHHH------H
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNHRGLGGVS-----ITSDCFYN-AGWTEDAREVIG------Y 225 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~-Gy~vv~~d~rG~G~s~-----~~~~~~~~-~~~~~Dl~~~l~------~ 225 (405)
..+.|++++--.+ ....|...+...+.+. |+.+..++... ... ...+..+- .|.+..+...++ .
T Consensus 30 ~~~~i~~IptAs~-~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 30 ARPKVLFVPTASG-DRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAI 106 (212)
T ss_pred CCCeEEEECCCCC-CHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHH
Confidence 4567889997654 3456778888889999 99999998754 111 01122222 232222222211 1
Q ss_pred HHHhCCCCcEEEEEEcHHHHHHHH
Q 015544 226 LHHEYPKAPLFAIGTSIGANILVK 249 (405)
Q Consensus 226 l~~~~~~~~i~lvG~S~GG~ia~~ 249 (405)
+++.+ .....++|.|.|+++...
T Consensus 107 l~~~~-~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 107 LKAAL-ERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHH-HCCCEEEEECHhHHhhCC
Confidence 22222 224789999999999765
No 251
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=55.47 E-value=18 Score=33.41 Aligned_cols=99 Identities=13% Similarity=0.176 Sum_probs=62.4
Q ss_pred CCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC-CCCCCCC----------------------CCCccc
Q 015544 156 KDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG-LGGVSIT----------------------SDCFYN 212 (405)
Q Consensus 156 ~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG-~G~s~~~----------------------~~~~~~ 212 (405)
+...+|++|++-|+.|+....+++++..++.+++-+.+++|+-= .-..+.+ ...+.+
T Consensus 14 ~~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~T 93 (366)
T KOG1532|consen 14 GAIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIVT 93 (366)
T ss_pred ccccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcchhh
Confidence 34578999999999998888999999999998888888888731 1122111 011100
Q ss_pred C--CChhHHHHHHHHHHHhCC---------CCcEEEEEEcHHHHHHHHHHhhc
Q 015544 213 A--GWTEDAREVIGYLHHEYP---------KAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 213 ~--~~~~Dl~~~l~~l~~~~~---------~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
. -+..-+.+++..+.++.+ ..+|=+.-+|.-|.|...-++..
T Consensus 94 sLNLF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass 146 (366)
T KOG1532|consen 94 SLNLFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASS 146 (366)
T ss_pred hHHHHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhc
Confidence 0 011234444444444322 24688889999999988766543
No 252
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=54.45 E-value=9.8 Score=38.82 Aligned_cols=54 Identities=20% Similarity=0.276 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhC-C-CCcEEEEEEcHHHHHHHHHHhhc-----CC----CCCceEEEEEcCCCCh
Q 015544 219 AREVIGYLHHEY-P-KAPLFAIGTSIGANILVKYLGEE-----GE----KTPVAGAAAICSPWDL 272 (405)
Q Consensus 219 l~~~l~~l~~~~-~-~~~i~lvG~S~GG~ia~~yl~~~-----~~----~~~v~~~v~i~~~~~~ 272 (405)
..++++.+.+.. + ..+++.+||||||.++=+.+... |+ ...-.|++.++.|..-
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 345666665542 3 67999999999998877666542 22 1146788888887544
No 253
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=54.35 E-value=66 Score=29.44 Aligned_cols=91 Identities=13% Similarity=0.165 Sum_probs=50.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCe-EEEEeCCCCCC--CCC------CCCCc-ccCCChhHHHH------H
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHRGLGG--VSI------TSDCF-YNAGWTEDARE------V 222 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~-vv~~d~rG~G~--s~~------~~~~~-~~~~~~~Dl~~------~ 222 (405)
..|.|++++--.+ ....|.....+.+.+.|++ |-.++.+.-.. .+. ..+.. ...+.+.-+.+ +
T Consensus 27 ~~~rI~~iptAS~-~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GGnq~~l~~~l~~t~l 105 (250)
T TIGR02069 27 EDAIIVIITSASE-EPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGGDQLRITSLLGDTPL 105 (250)
T ss_pred CCceEEEEeCCCC-ChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCCCHHHHHHHHcCCcH
Confidence 4467889996543 3456667788888889984 66666643211 110 01111 22334333331 2
Q ss_pred HHHHHHhCCCCcEEEEEEcHHHHHHHHHH
Q 015544 223 IGYLHHEYPKAPLFAIGTSIGANILVKYL 251 (405)
Q Consensus 223 l~~l~~~~~~~~i~lvG~S~GG~ia~~yl 251 (405)
.+.|++.+.. -..++|.|.|+++.....
T Consensus 106 ~~~l~~~~~~-G~vi~G~SAGA~i~~~~~ 133 (250)
T TIGR02069 106 LDRLRKRVHE-GIILGGTSAGAAVMSDTM 133 (250)
T ss_pred HHHHHHHHHc-CCeEEEccHHHHhcccce
Confidence 2233333322 378999999999875443
No 254
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=52.01 E-value=22 Score=33.35 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=22.2
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG 189 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~G 189 (405)
.+.+|.++=+||++|.....-.+-+++.+.+.|
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 478999999999998654433334455555544
No 255
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=50.46 E-value=2.5e+02 Score=28.97 Aligned_cols=100 Identities=20% Similarity=0.204 Sum_probs=62.9
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCC-CCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcE
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL-GGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPL 235 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~-G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i 235 (405)
+...|.|+-+-|=.|+..+..++.++..+.++-. -+.+|- --+.....++....+.+|+.++++..+.. .+
T Consensus 65 d~PPPfIvavvGPpGtGKsTLirSlVrr~tk~ti----~~i~GPiTvvsgK~RRiTflEcp~Dl~~miDvaKIa----DL 136 (1077)
T COG5192 65 DLPPPFIVAVVGPPGTGKSTLIRSLVRRFTKQTI----DEIRGPITVVSGKTRRITFLECPSDLHQMIDVAKIA----DL 136 (1077)
T ss_pred cCCCCeEEEeecCCCCChhHHHHHHHHHHHHhhh----hccCCceEEeecceeEEEEEeChHHHHHHHhHHHhh----he
Confidence 3456777778887777778888999988876421 122331 11122334444445669999999977653 23
Q ss_pred EE------EEEcHHHHHHHHHHhhcCCCCCceEEEE
Q 015544 236 FA------IGTSIGANILVKYLGEEGEKTPVAGAAA 265 (405)
Q Consensus 236 ~l------vG~S~GG~ia~~yl~~~~~~~~v~~~v~ 265 (405)
++ .|+-|-.+--++.+..|+-+ +|-|++.
T Consensus 137 VlLlIdgnfGfEMETmEFLnil~~HGmP-rvlgV~T 171 (1077)
T COG5192 137 VLLLIDGNFGFEMETMEFLNILISHGMP-RVLGVVT 171 (1077)
T ss_pred eEEEeccccCceehHHHHHHHHhhcCCC-ceEEEEe
Confidence 32 58888888888888887652 4555553
No 256
>PRK10824 glutaredoxin-4; Provisional
Probab=48.06 E-value=1.4e+02 Score=23.72 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=50.9
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFA 237 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~l 237 (405)
.+.|+|||.-|........|.+.....|.+.|...-.+|.-. ..++++.+.......---+|++
T Consensus 13 ~~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~----------------d~~~~~~l~~~sg~~TVPQIFI 76 (115)
T PRK10824 13 AENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ----------------NPDIRAELPKYANWPTFPQLWV 76 (115)
T ss_pred hcCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC----------------CHHHHHHHHHHhCCCCCCeEEE
Confidence 457899999996655667787777777877774443444310 0234444443322111125899
Q ss_pred EEEcHHHHHHHHHHhhcCC
Q 015544 238 IGTSIGANILVKYLGEEGE 256 (405)
Q Consensus 238 vG~S~GG~ia~~yl~~~~~ 256 (405)
=|...||.--+.-+.+.++
T Consensus 77 ~G~~IGG~ddl~~l~~~G~ 95 (115)
T PRK10824 77 DGELVGGCDIVIEMYQRGE 95 (115)
T ss_pred CCEEEcChHHHHHHHHCCC
Confidence 9999999977665555554
No 257
>PRK00889 adenylylsulfate kinase; Provisional
Probab=48.01 E-value=37 Score=28.81 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=30.7
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
+.+|++.|+.|+..+...+.++..+...|..++.+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 4488889999988888888888888888888888865
No 258
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=46.84 E-value=25 Score=25.67 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=33.0
Q ss_pred CChhHHHHHHHHHHHhCC---CCcEEEEEEcHHHHHHHHHHhhcCC
Q 015544 214 GWTEDAREVIGYLHHEYP---KAPLFAIGTSIGANILVKYLGEEGE 256 (405)
Q Consensus 214 ~~~~Dl~~~l~~l~~~~~---~~~i~lvG~S~GG~ia~~yl~~~~~ 256 (405)
++...+.+.+++++.+-+ ..++.++|-|-|=.++.+.++..+.
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~ 63 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGA 63 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcC
Confidence 456789999999988532 3579999999999999888887655
No 259
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=46.69 E-value=8.4 Score=34.74 Aligned_cols=40 Identities=20% Similarity=0.309 Sum_probs=31.8
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
..|+||++.|+.|+....-++.+...+-.+|++|.++.-+
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4679999999988777777888888888899999999765
No 260
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=46.27 E-value=97 Score=25.90 Aligned_cols=75 Identities=13% Similarity=0.256 Sum_probs=46.8
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
+.-++-.|..|.........+...+.....+++++.. |.-.... .. ....+.+++.++++.+++.+|..++++++
T Consensus 23 ~~~v~n~g~~G~t~~~~~~~~~~~~~~~~pd~v~i~~-G~ND~~~--~~-~~~~~~~~~~~l~~~~~~~~p~~~vi~~~ 97 (174)
T cd01841 23 GKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLFL-GTNDIGK--EV-SSNQFIKWYRDIIEQIREEFPNTKIYLLS 97 (174)
T ss_pred CCeEEecccccccHHHHHHHHHHHHHhcCCCEEEEEe-ccccCCC--CC-CHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4456788888876666656664566666677776653 3222111 11 11234578888999888888877777776
No 261
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=46.21 E-value=44 Score=28.71 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=34.8
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
.+.|+.+=|..|+..+..++.++..+..+|++|-++-+-|||.
T Consensus 5 ~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 5 MIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 4456677788887778888999999998999999998877764
No 262
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=45.96 E-value=35 Score=28.66 Aligned_cols=38 Identities=24% Similarity=0.342 Sum_probs=30.5
Q ss_pred EEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCC
Q 015544 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (405)
Q Consensus 164 vllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G 201 (405)
+.+-|..|+.....+..++..+.++|++|.++.+-+++
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 45558777777777788999998899999999986654
No 263
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=45.77 E-value=1.3e+02 Score=27.94 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=27.8
Q ss_pred cEEEEEEcHHHHHHHHHHh---hcCCCCCceEEEEEcCCCCh
Q 015544 234 PLFAIGTSIGANILVKYLG---EEGEKTPVAGAAAICSPWDL 272 (405)
Q Consensus 234 ~i~lvG~S~GG~ia~~yl~---~~~~~~~v~~~v~i~~~~~~ 272 (405)
|+++.|-|+|+.-+..... ...+ ++++++.+++|...
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~--~vdGalw~GpP~~s 149 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRD--RVDGALWVGPPFFS 149 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhh--hcceEEEeCCCCCC
Confidence 6999999999887654332 2233 69999999998765
No 264
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=45.53 E-value=77 Score=27.61 Aligned_cols=64 Identities=16% Similarity=0.199 Sum_probs=38.5
Q ss_pred EeCCCCCCCccHHHHHHHHHHhh----CCCeEEEEeCCCCCCCCCCC-CCcc---cCCChhHHHHHHHHHHH
Q 015544 165 VIPGLTSDSAASYIRHLVFNTAK----RGWNVVVSNHRGLGGVSITS-DCFY---NAGWTEDAREVIGYLHH 228 (405)
Q Consensus 165 llHG~~g~s~~~y~~~~~~~l~~----~Gy~vv~~d~rG~G~s~~~~-~~~~---~~~~~~Dl~~~l~~l~~ 228 (405)
++-|-+|+..+..++.++..++. ...+++++|..|.+...... +... .....+++..+++++..
T Consensus 42 li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 113 (205)
T PF01580_consen 42 LIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVAVATDPEEILRLLEELVE 113 (205)
T ss_dssp EEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S-B-SHHHHHHHHHHHHH
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccccccccHHHHHHHHHHHHH
Confidence 56677777788888888888877 68999999999764332211 1111 22345666666666543
No 265
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=44.47 E-value=1.3e+02 Score=28.06 Aligned_cols=38 Identities=26% Similarity=0.326 Sum_probs=27.3
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
++++++|+..+........+++.|.++|+.|.++...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 46666765433355566789999999999998887654
No 266
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=44.45 E-value=78 Score=26.50 Aligned_cols=75 Identities=17% Similarity=0.171 Sum_probs=44.1
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEE
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~ 240 (405)
.-++-.|+.|.........+.+.+......++++.. |..... .. .......+.+.++++.+++.+|..++++++.
T Consensus 23 ~~v~N~Gi~G~~~~~~~~~~~~~~~~~~p~~vvi~~-G~ND~~--~~-~~~~~~~~~~~~lv~~i~~~~~~~~iil~~~ 97 (171)
T cd04502 23 LPVVNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYA-GDNDLA--SG-RTPEEVLRDFRELVNRIRAKLPDTPIAIISI 97 (171)
T ss_pred CceeecCcccchHHHHHHHHHhhhccCCCCEEEEEE-ecCccc--CC-CCHHHHHHHHHHHHHHHHHHCCCCcEEEEEe
Confidence 346788998876555544454444444566666532 221110 00 0112234678888999988888888888774
No 267
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=44.20 E-value=77 Score=31.87 Aligned_cols=102 Identities=17% Similarity=0.196 Sum_probs=58.6
Q ss_pred CCCCCCcEEEEeCCCCCCCccHH-HHHHHHHHhhCCCe-EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhC--
Q 015544 155 SKDDTTPIAIVIPGLTSDSAASY-IRHLVFNTAKRGWN-VVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEY-- 230 (405)
Q Consensus 155 ~~~~~~P~VvllHG~~g~s~~~y-~~~~~~~l~~~Gy~-vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~-- 230 (405)
+++-+.|..|..-|+-. .+.+ .-.+++ +.|.. .+.-|.|=-|++=-... ...-+-+.++|+.-.+..
T Consensus 284 PGD~KPPL~VYFSGyR~--aEGFEgy~MMk---~Lg~PfLL~~DpRleGGaFYlGs----~eyE~~I~~~I~~~L~~LgF 354 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRP--AEGFEGYFMMK---RLGAPFLLIGDPRLEGGAFYLGS----DEYEQGIINVIQEKLDYLGF 354 (511)
T ss_pred CcCCCCCeEEeeccCcc--cCcchhHHHHH---hcCCCeEEeeccccccceeeeCc----HHHHHHHHHHHHHHHHHhCC
Confidence 45667889999999753 2222 001222 33443 44557776655321101 111234444444433332
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 231 PKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 231 ~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
....+++-|-|||..=|+.|++.... .||.|+-|.
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l~P-----~AIiVgKPL 389 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKLSP-----HAIIVGKPL 389 (511)
T ss_pred CHHHeeeccccccchhhhhhcccCCC-----ceEEEcCcc
Confidence 35679999999999999999887543 366677654
No 268
>PRK07933 thymidylate kinase; Validated
Probab=44.02 E-value=51 Score=29.28 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=34.5
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s 203 (405)
+|.+=|.-|+..+.-++.+++.|.++|++|++...+++|++
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 46777888877777889999999999999999999977654
No 269
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=43.41 E-value=25 Score=31.23 Aligned_cols=90 Identities=24% Similarity=0.192 Sum_probs=53.2
Q ss_pred CCCcEEEEeCCCCCCCcc-HHHHHHHHHHhhCCCeEEEEeCCCCCCCCC-----CCCCccc-CCChhHHHHHHH------
Q 015544 158 DTTPIAIVIPGLTSDSAA-SYIRHLVFNTAKRGWNVVVSNHRGLGGVSI-----TSDCFYN-AGWTEDAREVIG------ 224 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~-~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~-----~~~~~~~-~~~~~Dl~~~l~------ 224 (405)
..++.|.++|--++++.. .|+....+.|.+.|..+.-++.----.... ..+-.|- .|.+-++...+.
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~~~~Ie~~l~~~d~IyVgGGNTF~LL~~lke~gld~ 109 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLSKPPLAAIENKLMKADIIYVGGGNTFNLLQELKETGLDD 109 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeeccCCCHHHHHHhhhhccEEEECCchHHHHHHHHHHhCcHH
Confidence 346789999987654432 488888889999999888887632111100 1122332 355544443332
Q ss_pred HHHHhCCCCcEEEEEEcHHHHHHH
Q 015544 225 YLHHEYPKAPLFAIGTSIGANILV 248 (405)
Q Consensus 225 ~l~~~~~~~~i~lvG~S~GG~ia~ 248 (405)
-|+++-. +=+..+|+|.|++++.
T Consensus 110 iIr~~vk-~G~~YiG~SAGA~ia~ 132 (224)
T COG3340 110 IIRERVK-AGTPYIGWSAGANIAG 132 (224)
T ss_pred HHHHHHH-cCCceEEeccCceeec
Confidence 2222221 1367899999999864
No 270
>PRK03846 adenylylsulfate kinase; Provisional
Probab=42.76 E-value=1.3e+02 Score=26.19 Aligned_cols=40 Identities=10% Similarity=0.117 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
..+|.+|.+.|..|+..+...+.+...+...|+.++.+|-
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld~ 60 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLDG 60 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEcC
Confidence 3567899999998877777767777778777888888864
No 271
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=42.44 E-value=21 Score=33.24 Aligned_cols=84 Identities=15% Similarity=0.162 Sum_probs=45.1
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCC-------eEEEEeCCCCCCCCCC---CCC-cccC--C--ChhHHHHHHHHHH
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGW-------NVVVSNHRGLGGVSIT---SDC-FYNA--G--WTEDAREVIGYLH 227 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy-------~vv~~d~rG~G~s~~~---~~~-~~~~--~--~~~Dl~~~l~~l~ 227 (405)
-|++.|. |...-...+.+...+.+.|. +++.+|..|.=..+.. ..+ .|.. . ...++.++++.++
T Consensus 27 ~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 4466675 33333334455555566687 8999999993221111 000 0110 0 1235556655543
Q ss_pred HhCCCCcEEEEEEcH-HHHHHHHHHhh
Q 015544 228 HEYPKAPLFAIGTSI-GANILVKYLGE 253 (405)
Q Consensus 228 ~~~~~~~i~lvG~S~-GG~ia~~yl~~ 253 (405)
+-+++|.|- ||.+.-.++..
T Consensus 106 ------ptvlIG~S~~~g~ft~evv~~ 126 (279)
T cd05312 106 ------PTVLIGLSGVGGAFTEEVVRA 126 (279)
T ss_pred ------CCEEEEeCCCCCCCCHHHHHH
Confidence 458999994 77665555443
No 272
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=42.36 E-value=73 Score=27.21 Aligned_cols=53 Identities=15% Similarity=0.252 Sum_probs=40.7
Q ss_pred HhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHH
Q 015544 185 TAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIG 243 (405)
Q Consensus 185 l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~G 243 (405)
+.+.|++.+++|.=.+=-. + +......++.+.++.+++.++..++.++--|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~----~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTP----P--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCC----C--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 7788999999998664211 1 122334789999999999998778999999986
No 273
>CHL00175 minD septum-site determining protein; Validated
Probab=41.41 E-value=60 Score=30.00 Aligned_cols=40 Identities=15% Similarity=0.263 Sum_probs=30.6
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
...+|.+..|-+|...+....+++..+++.|++|+++|.=
T Consensus 14 ~~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 14 MSRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred CceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3456777777666556666678889999999999999884
No 274
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=40.92 E-value=65 Score=27.24 Aligned_cols=47 Identities=19% Similarity=0.295 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEc
Q 015544 217 EDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAIC 267 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~ 267 (405)
+++.+.++.++.+ ..++++.|-|..|++.+++++..++ .+..++=.+
T Consensus 55 ~~l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~--~I~~vvD~n 101 (160)
T PF08484_consen 55 AELREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDND--LIDYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TT--TS--EEES-
T ss_pred HHHHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcc--eeEEEEeCC
Confidence 3555555555554 3579999999999999999988766 566666443
No 275
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=40.20 E-value=1.2e+02 Score=28.14 Aligned_cols=92 Identities=16% Similarity=0.099 Sum_probs=51.9
Q ss_pred EeCCCCCCCccHHHHHHHHHHhhCCCeEEEE------eCCCCCCCCCCCCCcccCCChhHHHHHHHHHHH--hCCCCcEE
Q 015544 165 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVS------NHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH--EYPKAPLF 236 (405)
Q Consensus 165 llHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~------d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~--~~~~~~i~ 236 (405)
++||..|++ .-+..++..|++|+++ |+.|+|...... .-.+++.++++.+.+ ....-..+
T Consensus 10 Vv~G~vGn~------AA~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v------~~~e~l~~~l~~l~~~~~~~~~dav 77 (281)
T COG2240 10 VVYGSVGNS------AAIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV------MPPEQLADLLNGLEAIDKLGECDAV 77 (281)
T ss_pred EeecccccH------hHHHHHHHcCCceeeeceEEecCCCCCCCCCCcC------CCHHHHHHHHHHHHhcccccccCEE
Confidence 568877753 3445677789887765 688888743221 124777788887766 33444677
Q ss_pred EEEEcHHHHHHH---HHHhhcCCCCCceEEEEEcCC
Q 015544 237 AIGTSIGANILV---KYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 237 lvG~S~GG~ia~---~yl~~~~~~~~v~~~v~i~~~ 269 (405)
+.|+=-.+..+- .++.+..+. .-++.++++|.
T Consensus 78 ltGYlgs~~qv~~i~~~v~~vk~~-~P~~~~l~DPV 112 (281)
T COG2240 78 LTGYLGSAEQVRAIAGIVKAVKEA-NPNALYLCDPV 112 (281)
T ss_pred EEccCCCHHHHHHHHHHHHHHhcc-CCCeEEEeCCc
Confidence 777632222222 233332222 23466777763
No 276
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=39.50 E-value=52 Score=30.97 Aligned_cols=64 Identities=20% Similarity=0.161 Sum_probs=37.9
Q ss_pred HHHHHHHhhCCCeEEEEeCCCCCCCCCCCC--CcccCCChhHHHHHHHHHHHhCCCCc-----EEEEEEcH
Q 015544 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSD--CFYNAGWTEDAREVIGYLHHEYPKAP-----LFAIGTSI 242 (405)
Q Consensus 179 ~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~--~~~~~~~~~Dl~~~l~~l~~~~~~~~-----i~lvG~S~ 242 (405)
.+.+..|.++||.|+++|.-..|....... ..+..+...|-..+-+.+.+..+..= ...||-|+
T Consensus 14 SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv 84 (329)
T COG1087 14 SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESV 84 (329)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhh
Confidence 356788888999999999988776543322 12333455554444444444333322 34567675
No 277
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=39.12 E-value=40 Score=28.81 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=23.9
Q ss_pred EeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 165 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 165 llHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
+..+-+|...+.....++..++++|++|+++|.=
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 4444444445556667889999999999999983
No 278
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=39.10 E-value=59 Score=27.59 Aligned_cols=40 Identities=23% Similarity=0.319 Sum_probs=33.8
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCC
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G 201 (405)
.|+=+=|+-++.....+..+++.|.++||+|.++-+-+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 3566667766666778899999999999999999999998
No 279
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=38.94 E-value=35 Score=30.36 Aligned_cols=35 Identities=14% Similarity=0.396 Sum_probs=31.3
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
+|++-|.+|+....+.+.+++.|.+++++|+...-
T Consensus 3 LiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 3 LIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 67899999988888989999999999999988765
No 280
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=38.90 E-value=72 Score=25.95 Aligned_cols=15 Identities=27% Similarity=0.503 Sum_probs=11.3
Q ss_pred HHHHHhhCCCeEEEE
Q 015544 181 LVFNTAKRGWNVVVS 195 (405)
Q Consensus 181 ~~~~l~~~Gy~vv~~ 195 (405)
.+..|.+.||+|+++
T Consensus 100 ~~~~L~~~GwrvlvV 114 (150)
T COG3727 100 DIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHcCCeEEEE
Confidence 345678889998775
No 281
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=38.53 E-value=2.5 Score=38.81 Aligned_cols=89 Identities=17% Similarity=0.067 Sum_probs=51.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHH-HHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHh---CCCCc
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLV-FNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHE---YPKAP 234 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~-~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~---~~~~~ 234 (405)
....++..||... +.... ..+. ......++.++..|+|+++.+...... .++..|...+...+... ....+
T Consensus 87 ~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 161 (299)
T COG1073 87 FGESGGDPRGLAD-SEGYA-EDFSAAVLLLLSEGVLDKDYRLLGASLGPRIL---AGLSLGGPSAGALLAWGPTRLDASR 161 (299)
T ss_pred ccccccccccccC-ccccc-cccchhheeeeccccccHHHHHHhhhcCcceE---EEEEeeccchHHHhhcchhHHHhhc
Confidence 3345778888633 22222 2232 344456899999999999988632211 22333333333333322 23457
Q ss_pred EEEEEEcHHHHHHHHHHh
Q 015544 235 LFAIGTSIGANILVKYLG 252 (405)
Q Consensus 235 i~lvG~S~GG~ia~~yl~ 252 (405)
+.++|.|+||..+....+
T Consensus 162 ~~~~g~s~g~~~~~~~~~ 179 (299)
T COG1073 162 IVVWGESLGGALALLLLG 179 (299)
T ss_pred ccceeeccCceeeccccc
Confidence 999999999998765443
No 282
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=37.89 E-value=52 Score=23.96 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=24.8
Q ss_pred EeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 165 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 165 llHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
++=|..|...+.....++..+++.|++|+++|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 34455465566777888999999999999999
No 283
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=37.80 E-value=54 Score=32.62 Aligned_cols=39 Identities=13% Similarity=0.262 Sum_probs=32.9
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
..|.+|++-|..|.....-+..++..+.++|++|.+++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 457899999999877777778888888888999988876
No 284
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=37.63 E-value=50 Score=33.51 Aligned_cols=42 Identities=19% Similarity=0.175 Sum_probs=37.0
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
...|++|++-|+-|+....-++.+...+..+|++|..+..|.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 467999999999887778888999999999999999998764
No 285
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=37.35 E-value=1.1e+02 Score=28.70 Aligned_cols=67 Identities=19% Similarity=0.231 Sum_probs=44.0
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCC---------C-CC-cccCCChhHHHHHHHHHHHhCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT---------S-DC-FYNAGWTEDAREVIGYLHHEYP 231 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~---------~-~~-~~~~~~~~Dl~~~l~~l~~~~~ 231 (405)
+-++-|++| -+..| +++.|.++||.|..+..|..-.+... . ++ ....+...|...+++.+.+.-|
T Consensus 4 ~ALITGITG-QDGsY---La~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 4 VALITGITG-QDGSY---LAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred eEEEecccC-CchHH---HHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 457899987 46666 78999999999999999853322211 0 11 1223455677777777776666
Q ss_pred CC
Q 015544 232 KA 233 (405)
Q Consensus 232 ~~ 233 (405)
+.
T Consensus 80 dE 81 (345)
T COG1089 80 DE 81 (345)
T ss_pred hh
Confidence 43
No 286
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.27 E-value=1.4e+02 Score=24.81 Aligned_cols=72 Identities=8% Similarity=0.070 Sum_probs=42.2
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
-++-.|..|.........+.+.+ ....+++++..-+.-.... .....+.+.+.++++.+++..+..++++++
T Consensus 23 ~v~n~g~~G~~~~~~~~~l~~~~-~~~pd~vvl~~G~ND~~~~----~~~~~~~~~l~~li~~~~~~~~~~~vi~~~ 94 (169)
T cd01828 23 KVANRGISGDTTRGLLARLDEDV-ALQPKAIFIMIGINDLAQG----TSDEDIVANYRTILEKLRKHFPNIKIVVQS 94 (169)
T ss_pred ceEecCcccccHHHHHHHHHHHh-ccCCCEEEEEeeccCCCCC----CCHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 46778887766555544444444 4346777775532211111 111234478888888888877777777765
No 287
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=36.50 E-value=1.6e+02 Score=28.09 Aligned_cols=100 Identities=18% Similarity=0.150 Sum_probs=54.8
Q ss_pred EEeCCCCCCCccHHHHHHHHHHhhCC--CeEEEEe--CCCCCCCC--------CCCCCcccCCCh-hHHHHHHHHHHHhC
Q 015544 164 IVIPGLTSDSAASYIRHLVFNTAKRG--WNVVVSN--HRGLGGVS--------ITSDCFYNAGWT-EDAREVIGYLHHEY 230 (405)
Q Consensus 164 vllHG~~g~s~~~y~~~~~~~l~~~G--y~vv~~d--~rG~G~s~--------~~~~~~~~~~~~-~Dl~~~l~~l~~~~ 230 (405)
|+++|+ | |....+..+++.+.... ..|+++| .|+..--. ............ +-+..+++++....
T Consensus 57 lL~YG~-G-SKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~ 134 (326)
T PF04084_consen 57 LLFYGY-G-SKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRP 134 (326)
T ss_pred EEEEec-C-hHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccC
Confidence 478887 3 67777788888877653 6788887 23322100 000101111122 33444555555554
Q ss_pred CCCcEEEEEEcHHHHH--------HHHHHhhcCCCCCceEEEEEcC
Q 015544 231 PKAPLFAIGTSIGANI--------LVKYLGEEGEKTPVAGAAAICS 268 (405)
Q Consensus 231 ~~~~i~lvG~S~GG~i--------a~~yl~~~~~~~~v~~~v~i~~ 268 (405)
+..+++++=|++=|-. ++..++..|. |.-+++++.
T Consensus 135 ~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~---I~lIASiDh 177 (326)
T PF04084_consen 135 SPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPN---IHLIASIDH 177 (326)
T ss_pred CCCceEEEEECCCChhhcChHHHHHHHHHHcCCC---eEEEEeccC
Confidence 3668999999987665 2233333443 666666654
No 288
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=36.36 E-value=2.4e+02 Score=27.07 Aligned_cols=92 Identities=14% Similarity=0.181 Sum_probs=58.4
Q ss_pred EeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCccc-CCChhHHHHHHHHHHHhCCCC--cEEEEEEc
Q 015544 165 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN-AGWTEDAREVIGYLHHEYPKA--PLFAIGTS 241 (405)
Q Consensus 165 llHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~l~~l~~~~~~~--~i~lvG~S 241 (405)
+-|..++++.+ -+-.-++++..+||.++.+|=-| |+.+ ....+.+..+.+-++...+.+ .++++.-+
T Consensus 198 I~~~~G~DpAa-VafDAi~~Akar~~DvvliDTAG---------RLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDA 267 (340)
T COG0552 198 ISGKEGADPAA-VAFDAIQAAKARGIDVVLIDTAG---------RLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDA 267 (340)
T ss_pred EccCCCCCcHH-HHHHHHHHHHHcCCCEEEEeCcc---------cccCchhHHHHHHHHHHHhccccCCCCceEEEEEEc
Confidence 44443233332 33456677778899999999655 2222 234466777777776665533 37777777
Q ss_pred HHHHHHHHHHhhcCCCCCceEEEEE
Q 015544 242 IGANILVKYLGEEGEKTPVAGAAAI 266 (405)
Q Consensus 242 ~GG~ia~~yl~~~~~~~~v~~~v~i 266 (405)
.-|.=++.=+....+-..++|+|+-
T Consensus 268 ttGqnal~QAk~F~eav~l~GiIlT 292 (340)
T COG0552 268 TTGQNALSQAKIFNEAVGLDGIILT 292 (340)
T ss_pred ccChhHHHHHHHHHHhcCCceEEEE
Confidence 7777777767666665568887754
No 289
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=35.60 E-value=62 Score=29.93 Aligned_cols=41 Identities=12% Similarity=0.054 Sum_probs=30.5
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s 203 (405)
++.++ |=+|...+....+++..|+++|++|+++|.=-.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 45556 755555566667889999999999999998665543
No 290
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=34.77 E-value=83 Score=22.55 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=20.1
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHH-HhhCCCeEEEE
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFN-TAKRGWNVVVS 195 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~-l~~~Gy~vv~~ 195 (405)
..|.++++||-. ... ...++.. +.++|+.++.+
T Consensus 30 ~~~~~~lvhGga--~~G--aD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGA--PKG--ADRIAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCC--CCC--HHHHHHHHHHHCCCeeEEe
Confidence 347788999943 122 2445554 44578877765
No 291
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=33.92 E-value=1.4e+02 Score=28.37 Aligned_cols=72 Identities=18% Similarity=0.284 Sum_probs=47.0
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC----CCCCCCccc----CCChhHHHHHHHHHHHhCCCCc
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV----SITSDCFYN----AGWTEDAREVIGYLHHEYPKAP 234 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s----~~~~~~~~~----~~~~~Dl~~~l~~l~~~~~~~~ 234 (405)
.|+|-| .++.+-+.++..+.++||+|++==+-.-|.- ...+++..+ -...+.+.++.+++++..++..
T Consensus 31 ~VlITG----CDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 31 AVLITG----CDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred EEEEec----CCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 667777 3555667899999999999998654433311 111344332 1234789999999998877655
Q ss_pred EEEE
Q 015544 235 LFAI 238 (405)
Q Consensus 235 i~lv 238 (405)
+..+
T Consensus 107 Lwgl 110 (322)
T KOG1610|consen 107 LWGL 110 (322)
T ss_pred ceeE
Confidence 5544
No 292
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=32.88 E-value=75 Score=26.65 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=24.7
Q ss_pred EEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 164 vllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
.+..+-+|...+....+++..++++|++|+++|.=
T Consensus 3 ~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 3 VVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34443334445555678899999999999999764
No 293
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=32.81 E-value=2.7e+02 Score=25.87 Aligned_cols=61 Identities=20% Similarity=0.098 Sum_probs=40.3
Q ss_pred hCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHH
Q 015544 187 KRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILV 248 (405)
Q Consensus 187 ~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~ 248 (405)
++|-+|+++-+|--..+-.. -..+..-..+|...+++.++..-++.++.++=|+-||.+..
T Consensus 46 kr~srvI~~Ihrqe~~~~~g-iPi~~~I~i~dse~v~raI~~~~~~~~IdLii~TpGG~v~A 106 (285)
T PF01972_consen 46 KRGSRVITLIHRQERVSFLG-IPIYRYIDIDDSEFVLRAIREAPKDKPIDLIIHTPGGLVDA 106 (285)
T ss_pred HhCCEEEEEEEeccccceec-cccceeEcHhhHHHHHHHHHhcCCCCceEEEEECCCCcHHH
Confidence 57999999998731111100 11122234578888888888776667888888999998855
No 294
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=32.70 E-value=22 Score=29.98 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=28.1
Q ss_pred EEeCCCCCCCCCCCCCcccCCChhHHHHHH----HHHHHhCC----CCcEEEEEEcHHHH
Q 015544 194 VSNHRGLGGVSITSDCFYNAGWTEDAREVI----GYLHHEYP----KAPLFAIGTSIGAN 245 (405)
Q Consensus 194 ~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l----~~l~~~~~----~~~i~lvG~S~GG~ 245 (405)
-+-.-|||..... ...+.....+.+.+.+ +.++++++ ..+|.++|.||+..
T Consensus 58 rw~lVGHG~~~~~-~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 58 RWQLVGHGRDEFN-NQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEE--EESSTS-SSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eEEEEEeCCCcCC-CceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3344466655222 2222223357788888 77777662 34899999999877
No 295
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=32.36 E-value=3.1e+02 Score=23.22 Aligned_cols=39 Identities=18% Similarity=0.305 Sum_probs=31.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
..|.++.+.|..|+..+...+.+...+...|+.++.+|-
T Consensus 16 ~~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~~ 54 (184)
T TIGR00455 16 HRGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLDG 54 (184)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECC
Confidence 557799999998877777778888888777888887764
No 296
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=32.17 E-value=88 Score=27.03 Aligned_cols=25 Identities=12% Similarity=0.349 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHhCCCCcEEEEEE
Q 015544 216 TEDAREVIGYLHHEYPKAPLFAIGT 240 (405)
Q Consensus 216 ~~Dl~~~l~~l~~~~~~~~i~lvG~ 240 (405)
.+-+..+++.+++.+|..||+++-+
T Consensus 77 ~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 77 RERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp HHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEec
Confidence 4678889999999999999988864
No 297
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.96 E-value=1.3e+02 Score=24.66 Aligned_cols=70 Identities=10% Similarity=0.025 Sum_probs=40.4
Q ss_pred eCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 166 IPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 166 lHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
-.|+.|.......+.+-..+.+...+++++.. |....... .......+.+.++++.+++..|+.++++++
T Consensus 17 n~g~~G~~~~~~~~~~~~~~~~~~pd~vvi~~-G~ND~~~~---~~~~~~~~~~~~~i~~i~~~~p~~~ii~~~ 86 (157)
T cd01833 17 HEGHSGYLIDQIAAAAADWVLAAKPDVVLLHL-GTNDLVLN---RDPDTAPDRLRALIDQMRAANPDVKIIVAT 86 (157)
T ss_pred CCCCCCccHHHHHHHhhhccccCCCCEEEEec-cCcccccC---CCHHHHHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 46666655555544444555556677777755 32222111 011123478888999888888777766654
No 298
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=31.95 E-value=68 Score=28.53 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=30.4
Q ss_pred EeCCCCCCCccHHHHHHHHHHh-hCCCeEEEEeCCC
Q 015544 165 VIPGLTSDSAASYIRHLVFNTA-KRGWNVVVSNHRG 199 (405)
Q Consensus 165 llHG~~g~s~~~y~~~~~~~l~-~~Gy~vv~~d~rG 199 (405)
.+=|.+|+..+..+..+++.+. +.|..++++|.=|
T Consensus 27 ~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 27 AIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred EEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 4558888888888999999999 8899999999966
No 299
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=31.93 E-value=80 Score=28.29 Aligned_cols=40 Identities=8% Similarity=-0.028 Sum_probs=29.4
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCC
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G 201 (405)
+|.+..+-+|...+....+++..++++|++|+++|.=..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4555555545555666678889999999999999996554
No 300
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=31.74 E-value=1.4e+02 Score=26.24 Aligned_cols=90 Identities=16% Similarity=0.127 Sum_probs=50.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCC------CCCCcc-cCCChhHHHH------HHHH
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI------TSDCFY-NAGWTEDARE------VIGY 225 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~------~~~~~~-~~~~~~Dl~~------~l~~ 225 (405)
..+-|++++--.+. ...+...+.+.+.+.|..+..+...-....+. ..+..+ ..|.+..+.. .++.
T Consensus 28 ~~~~i~~iptA~~~-~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~ 106 (210)
T cd03129 28 AGARVLFIPTASGD-RDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDA 106 (210)
T ss_pred CCCeEEEEeCCCCC-hHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHH
Confidence 34567777765443 44566778888888899888776543211110 011111 2233322222 2233
Q ss_pred HHHhCCCCcEEEEEEcHHHHHHHHH
Q 015544 226 LHHEYPKAPLFAIGTSIGANILVKY 250 (405)
Q Consensus 226 l~~~~~~~~i~lvG~S~GG~ia~~y 250 (405)
+.+.+. .-..++|.|.|+++....
T Consensus 107 i~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 107 ILKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHHH-cCCeEEEcCHHHHHhhhc
Confidence 333332 347899999999998875
No 301
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=31.56 E-value=2.3e+02 Score=21.44 Aligned_cols=82 Identities=16% Similarity=0.182 Sum_probs=50.9
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCC-cEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA-PLF 236 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~-~i~ 236 (405)
...++||+..|..+.+...|.......|.++|.....+|..- . .++.+.+..+... +.- .++
T Consensus 10 ~~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~---------------~-~~~~~~l~~~tg~-~tvP~vf 72 (97)
T TIGR00365 10 KENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLE---------------D-PEIRQGIKEYSNW-PTIPQLY 72 (97)
T ss_pred ccCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCC---------------C-HHHHHHHHHHhCC-CCCCEEE
Confidence 356899999997655677787888888888887766666520 0 2233333322211 122 366
Q ss_pred EEEEcHHHHHHHHHHhhcCC
Q 015544 237 AIGTSIGANILVKYLGEEGE 256 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~ 256 (405)
+=|.-.||.--+.-+.+.++
T Consensus 73 i~g~~iGG~ddl~~l~~~g~ 92 (97)
T TIGR00365 73 VKGEFVGGCDIIMEMYQSGE 92 (97)
T ss_pred ECCEEEeChHHHHHHHHCcC
Confidence 66677899887766655544
No 302
>PRK06696 uridine kinase; Validated
Probab=31.22 E-value=84 Score=27.95 Aligned_cols=39 Identities=26% Similarity=0.456 Sum_probs=31.7
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
...|.+|.+-|..|+..+...+.++..+.+.|..++.+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 457899999999888788887888888887788887744
No 303
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.17 E-value=1.6e+02 Score=25.03 Aligned_cols=74 Identities=18% Similarity=0.237 Sum_probs=41.0
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
+.-+.-.|..|.....+...+-. +......++++..=+.--.... ......+++.++++.+++++|+.++++++
T Consensus 40 ~~~~~n~g~~G~t~~~~~~~l~~-~~~~~pd~Vii~~G~ND~~~~~----~~~~~~~~l~~li~~i~~~~~~~~iiv~~ 113 (191)
T cd01836 40 GVRWRLFAKTGATSADLLRQLAP-LPETRFDVAVISIGVNDVTHLT----SIARWRKQLAELVDALRAKFPGARVVVTA 113 (191)
T ss_pred ceEEEEEecCCcCHHHHHHHHHh-cccCCCCEEEEEecccCcCCCC----CHHHHHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 34455667766554444333322 4445677777743221101001 11234578889999998888877777764
No 304
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=31.02 E-value=2e+02 Score=27.48 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=26.0
Q ss_pred CCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCC
Q 015544 171 SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS 204 (405)
Q Consensus 171 g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~ 204 (405)
|+.....+..+++.+.++|++|.++ -||+|+..
T Consensus 61 GtGKTP~v~~L~~~l~~~g~~~~il-sRGYg~~~ 93 (325)
T PRK00652 61 GTGKTPVVIALAEQLQARGLKPGVV-SRGYGGKL 93 (325)
T ss_pred CCChHHHHHHHHHHHHHCCCeEEEE-CCCCCCCc
Confidence 4456778888999999999987655 68998754
No 305
>PTZ00062 glutaredoxin; Provisional
Probab=30.85 E-value=3.5e+02 Score=23.90 Aligned_cols=82 Identities=20% Similarity=0.195 Sum_probs=53.7
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCC-cEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA-PLF 236 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~-~i~ 236 (405)
...|+||+..|....+...|.+.....|.++|.....+|..- -+++++.+...... +.- .++
T Consensus 111 ~~~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~----------------d~~~~~~l~~~sg~-~TvPqVf 173 (204)
T PTZ00062 111 RNHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFE----------------DPDLREELKVYSNW-PTYPQLY 173 (204)
T ss_pred hcCCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCC----------------CHHHHHHHHHHhCC-CCCCeEE
Confidence 357999999997766788888888888888887666666430 13444444433221 221 367
Q ss_pred EEEEcHHHHHHHHHHhhcCC
Q 015544 237 AIGTSIGANILVKYLGEEGE 256 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~~ 256 (405)
+=|--.||.--+.-+.+.++
T Consensus 174 I~G~~IGG~d~l~~l~~~G~ 193 (204)
T PTZ00062 174 VNGELIGGHDIIKELYESNS 193 (204)
T ss_pred ECCEEEcChHHHHHHHHcCC
Confidence 77777898887766666554
No 306
>PLN02924 thymidylate kinase
Probab=30.28 E-value=1.2e+02 Score=27.04 Aligned_cols=42 Identities=17% Similarity=0.138 Sum_probs=35.3
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
...+.+|.+=|..|+..+.-++.+++.+..+|+.|+....++
T Consensus 13 ~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 13 ESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 455678899999888788788889999999999998887776
No 307
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=30.27 E-value=82 Score=26.67 Aligned_cols=33 Identities=24% Similarity=0.149 Sum_probs=23.3
Q ss_pred HHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 015544 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 221 ~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
-+++.+.++.- ..-.+.|.|+|+.++..|+...
T Consensus 15 Gvl~aL~e~gi-~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 15 GVAKALRERGP-LIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCC
Confidence 34555544432 2668999999999999888754
No 308
>PRK13768 GTPase; Provisional
Probab=30.23 E-value=80 Score=28.86 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=29.0
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
++++-|.+|...+.+...++..+..+|.+|+++|.
T Consensus 4 ~i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~ 38 (253)
T PRK13768 4 IVFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNL 38 (253)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHhcCCceEEEEC
Confidence 56677877777778888899999999999999885
No 309
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=30.03 E-value=95 Score=26.08 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=25.2
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
|.+..+-+|...+.....++..+++.|++|+++|.=
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D 37 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDAD 37 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCC
Confidence 334444444445555678888999999999999864
No 310
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=29.84 E-value=1.3e+02 Score=23.13 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=21.8
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 195 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~ 195 (405)
.++|+|+++.+. .... ....+..+.+.||+|..+
T Consensus 63 ~~~~vvvyc~~g--~~~~--s~~~a~~l~~~G~~v~~l 96 (110)
T cd01521 63 KEKLFVVYCDGP--GCNG--ATKAALKLAELGFPVKEM 96 (110)
T ss_pred CCCeEEEEECCC--CCch--HHHHHHHHHHcCCeEEEe
Confidence 467889898763 1111 245667788889986544
No 311
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.51 E-value=80 Score=30.87 Aligned_cols=38 Identities=21% Similarity=0.426 Sum_probs=31.0
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 195 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~ 195 (405)
..+|.||++-|+.|+....-+..++.++.++||.|..+
T Consensus 98 K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~Lv 135 (483)
T KOG0780|consen 98 KGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALV 135 (483)
T ss_pred cCCCcEEEEEeccCCCcceeHHHHHHHHHhcCCceeEE
Confidence 56789999999988766655678899999999987665
No 312
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=29.19 E-value=43 Score=33.61 Aligned_cols=105 Identities=20% Similarity=0.160 Sum_probs=58.3
Q ss_pred EEEEeCCCC--CCCcc--HHHHHHHHHHhh-CCCeEEEEeCCC--CCCCCC--CCCCcccCCChhHHHHHHHHHHHh---
Q 015544 162 IAIVIPGLT--SDSAA--SYIRHLVFNTAK-RGWNVVVSNHRG--LGGVSI--TSDCFYNAGWTEDAREVIGYLHHE--- 229 (405)
Q Consensus 162 ~VvllHG~~--g~s~~--~y~~~~~~~l~~-~Gy~vv~~d~rG--~G~s~~--~~~~~~~~~~~~Dl~~~l~~l~~~--- 229 (405)
++|.+-|.+ .++.+ .| =.+.++. ...-||.+|+|= +|---. ..+.-.+.|. -|-.-+++++++.
T Consensus 137 VlVWiyGGGF~sGt~SLdvY---dGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl-~DQqLAl~WV~~Ni~a 212 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVY---DGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL-LDQQLALQWVQENIAA 212 (601)
T ss_pred EEEEEEcCccccCCcceeee---ccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch-HHHHHHHHHHHHhHHH
Confidence 677777732 12222 23 1233443 346777888882 332211 1111122333 4667778888775
Q ss_pred CC--CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 015544 230 YP--KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPW 270 (405)
Q Consensus 230 ~~--~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~ 270 (405)
++ .+++.++|-|.|+.-+..-+..-+....++.+|+-++..
T Consensus 213 FGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 213 FGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred hCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 22 468999999999987664443333333577777777643
No 313
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=29.09 E-value=2.9e+02 Score=24.82 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=38.9
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcc--cCCChhHHHHHHHHHHHhCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY--NAGWTEDAREVIGYLHHEYP 231 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~--~~~~~~Dl~~~l~~l~~~~~ 231 (405)
++++-|.+|+ .-+.+++.|.++|++|+..+.+.-..... ....+ .....+++.++++.+.++++
T Consensus 11 ~vlItG~s~g----IG~~la~~l~~~G~~v~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (266)
T PRK06171 11 IIIVTGGSSG----IGLAIVKELLANGANVVNADIHGGDGQHE-NYQFVPTDVSSAEEVNHTVAEIIEKFG 76 (266)
T ss_pred EEEEeCCCCh----HHHHHHHHHHHCCCEEEEEeCCccccccC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4566674332 12568888999999999998764321110 01111 12334688888888887765
No 314
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=29.07 E-value=93 Score=29.74 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=32.5
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 195 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~ 195 (405)
+.+|.|+++=|..|.....-+.-+++++.++|++|+.-
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~Vlla 173 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLA 173 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEE
Confidence 46799999999988777666788999999999999875
No 315
>PRK13700 conjugal transfer protein TraD; Provisional
Probab=28.82 E-value=81 Score=33.54 Aligned_cols=36 Identities=25% Similarity=0.370 Sum_probs=32.8
Q ss_pred EEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 164 vllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
++++|.+|+..+..++.+++...++|-+++++|.=|
T Consensus 188 ~li~GttGSGKS~~i~~LL~~ir~RGdrAIIyD~~G 223 (732)
T PRK13700 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG 223 (732)
T ss_pred eEEeCCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 578999998888888999999999999999999987
No 316
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=28.51 E-value=2.8e+02 Score=21.53 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=20.7
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
+|+...+ |+.+..=...+...+...||+|+.+.
T Consensus 2 vl~~~~~--~e~H~lG~~~~~~~l~~~G~~V~~lg 34 (119)
T cd02067 2 VVIATVG--GDGHDIGKNIVARALRDAGFEVIDLG 34 (119)
T ss_pred EEEEeeC--CchhhHHHHHHHHHHHHCCCEEEECC
Confidence 3445555 34455445566777888999996554
No 317
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=28.40 E-value=1.6e+02 Score=27.59 Aligned_cols=58 Identities=17% Similarity=0.226 Sum_probs=43.6
Q ss_pred CChhHHHHHHHHHHHhCC----CCcEEEEEEcHHHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 015544 214 GWTEDAREVIGYLHHEYP----KAPLFAIGTSIGANILVKYLGEEGEKTPVAGAAAICSPWD 271 (405)
Q Consensus 214 ~~~~Dl~~~l~~l~~~~~----~~~i~lvG~S~GG~ia~~yl~~~~~~~~v~~~v~i~~~~~ 271 (405)
|+...+.+.|+|.+++.| ..++.++|-|-|=.++.+.++..+....-.|+..--++.+
T Consensus 19 GCe~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte 80 (398)
T COG3007 19 GCEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTE 80 (398)
T ss_pred cHHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCcc
Confidence 566789999999998876 4579999999999999999988876433444444444444
No 318
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=28.38 E-value=2.5e+02 Score=20.79 Aligned_cols=81 Identities=19% Similarity=0.286 Sum_probs=50.1
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCC-cEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA-PLF 236 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~-~i~ 236 (405)
...|+||+..|..+.+...|.....+.|.+.|...-..|.... .++.+.+.....+ ..- .++
T Consensus 6 ~~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~----------------~~~~~~l~~~~g~-~tvP~vf 68 (90)
T cd03028 6 KENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILED----------------EEVRQGLKEYSNW-PTFPQLY 68 (90)
T ss_pred ccCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCC----------------HHHHHHHHHHhCC-CCCCEEE
Confidence 3568999999988777888888888888888876666664310 2233333332221 111 256
Q ss_pred EEEEcHHHHHHHHHHhhcC
Q 015544 237 AIGTSIGANILVKYLGEEG 255 (405)
Q Consensus 237 lvG~S~GG~ia~~yl~~~~ 255 (405)
+=|.-+||.--+.-+-+.+
T Consensus 69 i~g~~iGG~~~l~~l~~~g 87 (90)
T cd03028 69 VNGELVGGCDIVKEMHESG 87 (90)
T ss_pred ECCEEEeCHHHHHHHHHcC
Confidence 6666678877665554443
No 319
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=28.35 E-value=1e+02 Score=30.89 Aligned_cols=40 Identities=20% Similarity=0.265 Sum_probs=32.9
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
..|.++++-|.+|.........++..+.++|++|.+++.-
T Consensus 93 ~~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~D 132 (437)
T PRK00771 93 LKPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAAD 132 (437)
T ss_pred CCCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecCC
Confidence 3577888889998877777788998898899999888764
No 320
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.18 E-value=3e+02 Score=23.70 Aligned_cols=69 Identities=14% Similarity=0.199 Sum_probs=46.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCC----CCCCcccC---CChhHHHHHHHHHHHhCC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI----TSDCFYNA---GWTEDAREVIGYLHHEYP 231 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~----~~~~~~~~---~~~~Dl~~~l~~l~~~~~ 231 (405)
.+..|-++.|..++ .-+..++.++++|-.|+..|++..++.+. -....|.. ...+|+++++...+.+|+
T Consensus 7 ~kglvalvtggasg----lg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 7 TKGLVALVTGGASG----LGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred hcCeeEEeecCccc----ccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 44567677774322 13678899999999999999998765431 11122221 223799999999988876
No 321
>PRK06523 short chain dehydrogenase; Provisional
Probab=28.05 E-value=3.4e+02 Score=24.25 Aligned_cols=65 Identities=14% Similarity=0.023 Sum_probs=38.0
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcc--cCCChhHHHHHHHHHHHhCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY--NAGWTEDAREVIGYLHHEYPK 232 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~--~~~~~~Dl~~~l~~l~~~~~~ 232 (405)
.+++.|.+|+- -+.+++.|+++|++|++.+.+.-...... -... .....+++.++++.+.++++.
T Consensus 11 ~vlItGas~gI----G~~ia~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (260)
T PRK06523 11 RALVTGGTKGI----GAATVARLLEAGARVVTTARSRPDDLPEG-VEFVAADLTTAEGCAAVARAVLERLGG 77 (260)
T ss_pred EEEEECCCCch----hHHHHHHHHHCCCEEEEEeCChhhhcCCc-eeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 45777754432 25688888999999999986532111100 0111 123346777888888777653
No 322
>PRK10867 signal recognition particle protein; Provisional
Probab=28.03 E-value=1e+02 Score=30.84 Aligned_cols=39 Identities=18% Similarity=0.241 Sum_probs=31.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhC-CCeEEEEeC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNH 197 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~-Gy~vv~~d~ 197 (405)
..|.+|++-|.+|.........++.++.++ |.+|.+++.
T Consensus 98 ~~p~vI~~vG~~GsGKTTtaakLA~~l~~~~G~kV~lV~~ 137 (433)
T PRK10867 98 KPPTVIMMVGLQGAGKTTTAGKLAKYLKKKKKKKVLLVAA 137 (433)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 457788888999887777778888888887 988877665
No 323
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=27.88 E-value=1.1e+02 Score=22.94 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=22.6
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
.++|+|++|++ |. .+ ...+..|.+.||+ +.++.|
T Consensus 60 ~~~~ivv~C~~--G~-rs---~~aa~~L~~~G~~--~~~l~G 93 (100)
T cd01523 60 DDQEVTVICAK--EG-SS---QFVAELLAERGYD--VDYLAG 93 (100)
T ss_pred CCCeEEEEcCC--CC-cH---HHHHHHHHHcCce--eEEeCC
Confidence 45688888875 32 22 3466778889998 555554
No 324
>PF00101 RuBisCO_small: Ribulose bisphosphate carboxylase, small chain; InterPro: IPR000894 RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) is a bifunctional enzyme that catalyses both the carboxylation and oxygenation of ribulose-1,5-bisphosphate (RuBP) [], thus fixing carbon dioxide as the first step of the Calvin cycle. RuBisCO is the major protein in the stroma of chloroplasts, and in higher plants exists as a complex of 8 large and 8 small subunits. The function of the small subunit is unknown []. While the large subunit is coded for by a single gene, the small subunit is coded for by several different genes, which are distributed in a tissue specific manner. They are transcriptionally regulated by light receptor phytochrome [], which results in RuBisCO being more abundant during the day when it is required. The RuBisCo small subunit consists of a central four-stranded beta-sheet, with two helices packed against it [].; PDB: 1BWV_W 1IWA_P 3AXM_X 1WDD_S 3AXK_T 1IR2_K 1RBL_N 1UZH_J 1RSC_P 1UW9_C ....
Probab=27.86 E-value=2.9e+02 Score=21.34 Aligned_cols=64 Identities=13% Similarity=-0.002 Sum_probs=39.1
Q ss_pred HHHHHHHHhhCCCeEE-EEeCCCCCC-CCCC--CCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEc
Q 015544 178 IRHLVFNTAKRGWNVV-VSNHRGLGG-VSIT--SDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTS 241 (405)
Q Consensus 178 ~~~~~~~l~~~Gy~vv-~~d~rG~G~-s~~~--~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S 241 (405)
+...+.++.++||.+. =+.-..+-. +... ....+.......+.+.|+..++.+|+.-|=++|+.
T Consensus 16 i~~Qv~~ll~qG~~i~iE~ad~r~~r~~~W~mW~~p~~~~~~~~~Vl~el~~c~~~~p~~yVRlig~D 83 (99)
T PF00101_consen 16 IAKQVRYLLSQGWIIGIEHADPRRFRTSYWQMWKLPMFGCTDPAQVLAELEACLAEHPGEYVRLIGFD 83 (99)
T ss_dssp HHHHHHHHHHTT-EEEEEEESCGGSTSSS-EEESSEBTTBSSHHHHHHHHHHHHHHSTTSEEEEEEEE
T ss_pred HHHHHHhhhhcCceeeEEecCCCCCCCCEeecCCCCCcCCCCHHHHHHHHHHHHHhCCCceEEEEEEc
Confidence 5677888889999763 233222211 1111 12233334456777888888899999889899875
No 325
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=27.86 E-value=2.1e+02 Score=27.38 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=27.3
Q ss_pred CCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCC
Q 015544 171 SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSIT 206 (405)
Q Consensus 171 g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~ 206 (405)
|+.....+..+++.|.++|+++.++ -||+|+....
T Consensus 47 GTGKTP~v~~L~~~L~~~G~~~~Il-SRGYg~~~~~ 81 (326)
T PF02606_consen 47 GTGKTPLVIWLARLLQARGYRPAIL-SRGYGRKSKG 81 (326)
T ss_pred CCCchHHHHHHHHHHHhcCCceEEE-cCCCCCCCCC
Confidence 4456788889999999999997666 5799976543
No 326
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=27.76 E-value=88 Score=29.68 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=21.7
Q ss_pred HHHHHHHHhCCC----CcEEEEEEcHHHHHHHHHHh
Q 015544 221 EVIGYLHHEYPK----APLFAIGTSIGANILVKYLG 252 (405)
Q Consensus 221 ~~l~~l~~~~~~----~~i~lvG~S~GG~ia~~yl~ 252 (405)
.+++.+.++.+. .-=.+.|.|+||.++..++.
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~ 51 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLH 51 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHc
Confidence 445555554321 12479999999999998885
No 327
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=27.67 E-value=1.2e+02 Score=30.20 Aligned_cols=45 Identities=20% Similarity=0.301 Sum_probs=0.0
Q ss_pred ccccCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEE
Q 015544 151 NNFISKDDTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVS 195 (405)
Q Consensus 151 ~~~~~~~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~ 195 (405)
+.+..-....|.||++=|+-|+....-..-++.++.++|+.|.++
T Consensus 90 ~~~~~l~~~~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllV 134 (451)
T COG0541 90 NSELNLAKKPPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLV 134 (451)
T ss_pred CcccccCCCCCeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEE
No 328
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=27.51 E-value=62 Score=28.94 Aligned_cols=35 Identities=9% Similarity=0.282 Sum_probs=25.6
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
..||++|..... ....+..+++.+.++||+.+.++
T Consensus 187 g~IiLlHd~~~~-t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKD-NAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCC-HHHHHHHHHHHHHHCCCEEEEhH
Confidence 458899974322 23356889999999999998764
No 329
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=27.30 E-value=88 Score=29.58 Aligned_cols=33 Identities=36% Similarity=0.251 Sum_probs=23.3
Q ss_pred HHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 015544 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 221 ~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
-+++.+.++ +-..=.++|.|+||.++..|+...
T Consensus 32 GvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEA-GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 345555444 223568999999999999998764
No 330
>TIGR02759 TraD_Ftype type IV conjugative transfer system coupling protein TraD. The TraD protein performs an essential coupling function in conjugative type IV secretion systems. This protein sits at the inner membrane in contact with the assembled pilus and its scaffold as well as the relaxosome-plasmid DNA complex (through TraM).
Probab=27.28 E-value=90 Score=32.38 Aligned_cols=36 Identities=25% Similarity=0.321 Sum_probs=30.8
Q ss_pred EEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 164 vllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
++++|-+|+..+..+..+...+.++|.+++++|.-|
T Consensus 179 ~li~G~tGsGKs~~i~~ll~~~~~~g~~~ii~D~~g 214 (566)
T TIGR02759 179 ILIHGTTGSGKSVAIRKLLRWIRQRGDRAIIYDKGC 214 (566)
T ss_pred eEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 478888887778788888888888899999999876
No 331
>PRK05541 adenylylsulfate kinase; Provisional
Probab=26.82 E-value=1e+02 Score=25.98 Aligned_cols=38 Identities=18% Similarity=0.166 Sum_probs=30.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
..|.+|++-|..|+..+...+.+...+...+..++.+|
T Consensus 5 ~~~~~I~i~G~~GsGKst~a~~l~~~l~~~~~~~~~~~ 42 (176)
T PRK05541 5 PNGYVIWITGLAGSGKTTIAKALYERLKLKYSNVIYLD 42 (176)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEe
Confidence 45678899999988888787888888887777777775
No 332
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=26.31 E-value=1.7e+02 Score=28.76 Aligned_cols=45 Identities=16% Similarity=0.142 Sum_probs=29.4
Q ss_pred CCcEEEEeCCCC-CCCccHHHHHHHHHHhhCCCeEEEEeC-CCCCCC
Q 015544 159 TTPIAIVIPGLT-SDSAASYIRHLVFNTAKRGWNVVVSNH-RGLGGV 203 (405)
Q Consensus 159 ~~P~VvllHG~~-g~s~~~y~~~~~~~l~~~Gy~vv~~d~-rG~G~s 203 (405)
.++.||.+-..- |.....-.-+++..|+.+|++|+++|. -..|..
T Consensus 104 ~~~~vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~nl 150 (387)
T PHA02519 104 KNPVVLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQGTA 150 (387)
T ss_pred CCceEEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCc
Confidence 334454444333 333444456788889999999999996 766654
No 333
>COG3181 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.29 E-value=1.2e+02 Score=28.81 Aligned_cols=47 Identities=32% Similarity=0.473 Sum_probs=39.1
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHhh-CCCeEEEEeCCCCCCC
Q 015544 157 DDTTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHRGLGGV 203 (405)
Q Consensus 157 ~~~~P~VvllHG~~g~s~~~y~~~~~~~l~~-~Gy~vv~~d~rG~G~s 203 (405)
.+.+|+=++++.-.|+..+...|.+.+.+.+ .|-.+++-|.+|-|+.
T Consensus 25 ~P~~~it~Ivp~~~GGg~D~~aR~~~~~l~k~lg~~v~V~N~pGagG~ 72 (319)
T COG3181 25 YPERPITIIVPAAAGGGTDQTARALAESLSKELGQPVVVDNKPGAGGA 72 (319)
T ss_pred CCCCCeEEEEecCCCChHHHHHHHHHHHHHHHhCCCEEEEecCCCcch
Confidence 3577888899998888888888888888876 5899999999998764
No 334
>PRK13973 thymidylate kinase; Provisional
Probab=25.88 E-value=1.5e+02 Score=26.17 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=33.5
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
+.+|.+=|..|+..+.-++.+++.|.++|+.|+....||
T Consensus 3 g~~IviEG~dGsGKtTq~~~l~~~l~~~g~~~~~~~~p~ 41 (213)
T PRK13973 3 GRFITFEGGEGAGKSTQIRLLAERLRAAGYDVLVTREPG 41 (213)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 356777899887777778899999999999999999887
No 335
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=25.63 E-value=1.1e+02 Score=27.80 Aligned_cols=34 Identities=24% Similarity=0.059 Sum_probs=22.5
Q ss_pred HHHHHHHHhCCC-CcEEEEEEcHHHHHHHHHHhhc
Q 015544 221 EVIGYLHHEYPK-APLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 221 ~~l~~l~~~~~~-~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
-+++.+.++.+. ..=.+.|.|+|+.++..|+...
T Consensus 17 GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 17 GVAVCLKKYAPHLLLNKISGASAGALAACCLLCDL 51 (245)
T ss_pred HHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCC
Confidence 345555555321 1123999999999999888754
No 336
>PRK05568 flavodoxin; Provisional
Probab=25.52 E-value=3.1e+02 Score=21.99 Aligned_cols=79 Identities=11% Similarity=0.056 Sum_probs=42.0
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCC-C------CcccCCC--hhHHHHHHHHHHHhCCC
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITS-D------CFYNAGW--TEDAREVIGYLHHEYPK 232 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~-~------~~~~~~~--~~Dl~~~l~~l~~~~~~ 232 (405)
++|+.+-.+|+ .....+.+++.+.+.|..|.+.|..-.-...... + ..|..+. ...+...++.+......
T Consensus 4 ~~IvY~S~~Gn-T~~~a~~i~~~~~~~g~~v~~~~~~~~~~~~~~~~d~iilgsp~y~~~~~~~~~~~~f~~~~~~~~~~ 82 (142)
T PRK05568 4 INIIYWSGTGN-TEAMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGSPAMGDEVLEEGEMEPFVESISSLVKG 82 (142)
T ss_pred EEEEEECCCch-HHHHHHHHHHHHHHCCCeEEEEECCCCCHHHHHhCCEEEEECCccCcccccchhHHHHHHHhhhhhCC
Confidence 34444444454 4455577777787889999888886432111110 0 0122221 13455666665444445
Q ss_pred CcEEEEEEc
Q 015544 233 APLFAIGTS 241 (405)
Q Consensus 233 ~~i~lvG~S 241 (405)
.++.++|.+
T Consensus 83 k~~~~f~t~ 91 (142)
T PRK05568 83 KKLVLFGSY 91 (142)
T ss_pred CEEEEEEcc
Confidence 567777763
No 337
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=25.48 E-value=83 Score=31.92 Aligned_cols=74 Identities=16% Similarity=0.224 Sum_probs=50.8
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCC-CCcEE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYP-KAPLF 236 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~-~~~i~ 236 (405)
...|+||++-|+-+.....-++.+...+..+||+|+.+--|. . .+.-...+-...++.| ...+.
T Consensus 296 ~~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~Pt--------~-------~E~~~~~lwRf~~~lP~~G~i~ 360 (493)
T TIGR03708 296 RKRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAPT--------D-------EEKAQHYLWRFWRHIPRRGRIT 360 (493)
T ss_pred CCCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCcC--------H-------HHHcCcHHHHHHHhCCCCCeEE
Confidence 567999999999877777888999999999999999885541 0 1222233333444554 45677
Q ss_pred EEEEcHHHHH
Q 015544 237 AIGTSIGANI 246 (405)
Q Consensus 237 lvG~S~GG~i 246 (405)
+.=-|+=+-+
T Consensus 361 iFdRSwY~~v 370 (493)
T TIGR03708 361 IFDRSWYGRV 370 (493)
T ss_pred EEcCCccCCc
Confidence 7776665444
No 338
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=25.48 E-value=1.8e+02 Score=25.37 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=27.6
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhh-CCCeEEEEeCC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAK-RGWNVVVSNHR 198 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~-~Gy~vv~~d~r 198 (405)
...+|.++-+-+|...+.....++..+++ .|++|+++|.=
T Consensus 34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 34566666554454455556678888886 69999998874
No 339
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of inorganic sulfate.
Probab=25.40 E-value=87 Score=25.86 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=27.5
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
||++-|..|+..+.+.+.+...+...|+.++.+|.
T Consensus 1 ~i~i~G~~GsGKSTla~~L~~~l~~~g~~~~~i~~ 35 (149)
T cd02027 1 VIWLTGLSGSGKSTIARALEEKLFQRGRPVYVLDG 35 (149)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 35677988877888888888888878888888763
No 340
>PRK09004 FMN-binding protein MioC; Provisional
Probab=25.36 E-value=3.6e+02 Score=22.13 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=25.8
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
|.++-|...+..+.+.+.+++.+.+.|+.|.+.|..
T Consensus 4 i~I~ygS~tGnae~~A~~l~~~~~~~g~~~~~~~~~ 39 (146)
T PRK09004 4 ITLISGSTLGGAEYVADHLAEKLEEAGFSTETLHGP 39 (146)
T ss_pred EEEEEEcCchHHHHHHHHHHHHHHHcCCceEEeccC
Confidence 455666555556667788888888889998887753
No 341
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal sighnal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Probab=25.36 E-value=1.2e+02 Score=25.50 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=28.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
++++-|-.|...+.....++..+.+.|.+|+++|.-
T Consensus 2 ~~~~~G~~G~GKTt~~~~la~~~~~~g~~v~~i~~D 37 (173)
T cd03115 2 VILLVGLQGVGKTTTAAKLALYLKKKGKKVLLVAAD 37 (173)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 456668888777778888898898889999888753
No 342
>cd07561 Peptidase_S41_CPP_like C-terminal processing peptidase-like; serine protease family S41. Bacterial protease homologs of the S41 family related to C-terminal processing peptidase (CPP). CPP-1 is believed to be important for the degradation of incorrectly synthesized proteins as well as protection from thermal and osmotic stresses. CPP is synthesized with an extension on its carboxyl-terminus and specifically recognizes a C-terminal tripeptide, but cleaves at variable distance from the C-terminus. The CPP active site consists of a serine/lysine catalytic dyad. Conservation of these residues is seen in the CPP-like proteins of this group. CPP proteins contain a PDZ domain that promotes protein-protein interactions and is important for substrate recognition however, most of CPP-like proteins only have an internal fragment or lack the PDZ domain.
Probab=25.34 E-value=2.7e+02 Score=25.47 Aligned_cols=40 Identities=20% Similarity=0.145 Sum_probs=29.5
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
-.|-++++..+... .+......+.++|.+-+++|+|+.|+
T Consensus 67 GYi~i~~F~~~~~~-~l~~a~~~l~~~~~~~LIlDLR~N~G 106 (256)
T cd07561 67 GYLVYNSFTSGYDD-ELNQAFAEFKAQGVTELVLDLRYNGG 106 (256)
T ss_pred EEEEECccccchHH-HHHHHHHHHHHcCCCeEEEEeCCCCC
Confidence 36677777654333 34777777888899999999999765
No 343
>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis []. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents CobW-like proteins, including P47K (P31521 from SWISSPROT), a Pseudomonas chlororaphis protein needed for nitrile hydratase expression [], and urease accessory protein UreG, which acts as a chaperone in the activation of urease upon insertion of nickel into the active site [].; PDB: 2WSM_B 1NIJ_A 2HF9_A 2HF8_B.
Probab=25.33 E-value=83 Score=26.85 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=24.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
|+++.|+.|+.....++++.+ ...+|.++.++-
T Consensus 2 v~ii~GfLGsGKTTli~~ll~-~~~~~~~~~vI~ 34 (178)
T PF02492_consen 2 VIIITGFLGSGKTTLINHLLK-RNRQGERVAVIV 34 (178)
T ss_dssp EEEEEESTTSSHHHHHHHHHH-HHTTTS-EEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHH-HhcCCceeEEEE
Confidence 679999999888888888887 555677766653
No 344
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=25.25 E-value=1.2e+02 Score=27.79 Aligned_cols=35 Identities=20% Similarity=0.110 Sum_probs=26.1
Q ss_pred CCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 168 GLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 168 G~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
|=+|...+....+++..++++|++|+++|.=-.|.
T Consensus 7 gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq~~ 41 (267)
T cd02032 7 GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPKHD 41 (267)
T ss_pred cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 64454455556788999999999999999865443
No 345
>PRK07053 glutamine amidotransferase; Provisional
Probab=25.12 E-value=5.1e+02 Score=23.30 Aligned_cols=83 Identities=13% Similarity=0.178 Sum_probs=46.3
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC-CCC------------CCCccc---CCChhHHHHHHH
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV-SIT------------SDCFYN---AGWTEDAREVIG 224 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s-~~~------------~~~~~~---~~~~~Dl~~~l~ 224 (405)
+++|+-|--..+ ...+.+.+.+.|+.+-+++.-. +.. ... ....+. ..|..+..+.++
T Consensus 4 ~ilviqh~~~e~-----~g~i~~~L~~~g~~~~v~~~~~-~~~~~~~~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~i~ 77 (234)
T PRK07053 4 TAVAIRHVAFED-----LGSFEQVLGARGYRVRYVDVGV-DDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALLR 77 (234)
T ss_pred eEEEEECCCCCC-----ChHHHHHHHHCCCeEEEEecCC-CccCCCCccCCCEEEECCCCCCCCCCCcCCcHHHHHHHHH
Confidence 567788874322 2457788888898877765421 111 000 001111 124445555555
Q ss_pred HHHHhCCCCcEEEEEEcHHHHHHHHHHhh
Q 015544 225 YLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 225 ~l~~~~~~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
.+.+. .+-++|..+|..+....++-
T Consensus 78 ~~~~~----~~PvlGIC~G~Qlla~alGg 102 (234)
T PRK07053 78 QRLAA----GLPTLGICLGAQLIARALGA 102 (234)
T ss_pred HHHHC----CCCEEEECccHHHHHHHcCC
Confidence 44332 34589999999998887753
No 346
>PF10412 TrwB_AAD_bind: Type IV secretion-system coupling protein DNA-binding domain; InterPro: IPR019476 The plasmid conjugative coupling protein TraD (also known as TrwB) is a basic integral inner-membrane nucleoside-triphosphate-binding protein. It is the structural prototype for the type IV secretion system coupling proteins, a family of proteins essential for macromolecular transport between cells []. This protein forms hexamers from six structurally very similar protomers []. This hexamer contains a central channel running from the cytosolic pole (formed by the all-alpha domains) to the membrane pole ending at the transmembrane pore shaped by 12 transmembrane helices, rendering an overall mushroom-like structure. The TrwB all-alpha domain appears to be the DNA-binding domain of the structure. ; PDB: 1E9S_D 1E9R_F 1GKI_B 1GL7_G 1GL6_A.
Probab=25.05 E-value=73 Score=31.21 Aligned_cols=36 Identities=31% Similarity=0.472 Sum_probs=28.5
Q ss_pred EEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 164 vllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
+++.|-+|+..+..+..++..+.++|.++|++|.=|
T Consensus 18 ~li~G~~GsGKT~~i~~ll~~~~~~g~~~iI~D~kg 53 (386)
T PF10412_consen 18 ILIIGATGSGKTQAIRHLLDQIRARGDRAIIYDPKG 53 (386)
T ss_dssp EEEEE-TTSSHHHHHHHHHHHHHHTT-EEEEEEETT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 367787787788888999999999999999999765
No 347
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=24.99 E-value=1.8e+02 Score=25.21 Aligned_cols=39 Identities=5% Similarity=0.184 Sum_probs=26.1
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
..+|.+.-+-+|...+.....++..++++|.+|+++|.=
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 344444444434444555667888899999999999873
No 348
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=24.91 E-value=1.5e+02 Score=29.03 Aligned_cols=43 Identities=21% Similarity=0.173 Sum_probs=28.4
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC-CCCCCC
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH-RGLGGV 203 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~-rG~G~s 203 (405)
.+|.+...=+|.....-..+++..++.+|++|+++|. -..|..
T Consensus 107 ~vIai~n~KGGVGKTT~a~nLA~~LA~~G~rVLlID~~DpQ~nl 150 (388)
T PRK13705 107 PVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTA 150 (388)
T ss_pred eEEEEECCCCCchHHHHHHHHHHHHHhcCCCeEEEcCCCCCCch
Confidence 3444444333433444456788889999999999995 666653
No 349
>PRK06179 short chain dehydrogenase; Provisional
Probab=24.74 E-value=2.8e+02 Score=24.95 Aligned_cols=65 Identities=11% Similarity=0.085 Sum_probs=37.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCccc--CCChhHHHHHHHHHHHhCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN--AGWTEDAREVIGYLHHEYP 231 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~--~~~~~Dl~~~l~~l~~~~~ 231 (405)
.+++-|-+|+ .-+.+++.|+++|++|++.+...-.......-..+. ....+++.++++.+.++++
T Consensus 6 ~vlVtGasg~----iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 6 VALVTGASSG----IGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred EEEEecCCCH----HHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 3466664332 235788899999999999987532111111111111 2334678888888877664
No 350
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2.7.1.48), also known as uridine kinase or uridine-cytidine kinase (UCK).
Probab=24.73 E-value=2.5e+02 Score=23.95 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=28.2
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
||.+-|..|+..+...+.++..+...|.++.++..-+
T Consensus 1 ii~i~G~sgsGKttla~~l~~~l~~~~~~~~~i~~Dd 37 (179)
T cd02028 1 VVGIAGPSGSGKTTFAKKLSNQLRVNGIGPVVISLDD 37 (179)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEehhh
Confidence 4577788887777777888888887788888876655
No 351
>PLN02289 ribulose-bisphosphate carboxylase small chain
Probab=24.49 E-value=4.5e+02 Score=22.46 Aligned_cols=80 Identities=19% Similarity=0.203 Sum_probs=48.4
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCe-EEEEeCC------CCCCCCCCCCCcccCCCh------hHHHHHHH
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHR------GLGGVSITSDCFYNAGWT------EDAREVIG 224 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~-vv~~d~r------G~G~s~~~~~~~~~~~~~------~Dl~~~l~ 224 (405)
..-.++=+++-++ ++. +...++++.++||. |+=++.. .|..++..-+..|..-|. .|..+++.
T Consensus 65 kkfETfSYLPpLt---deq-I~kQVeYli~~GW~pclEf~~~~~~~~r~~~~s~~yyD~rYWtMWKLPMFg~tD~~~Vl~ 140 (176)
T PLN02289 65 KKFETLSYLPDLT---DEE-LAKEVDYLLRNKWVPCLEFELEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDSAQVLK 140 (176)
T ss_pred cceeeeecCCCCC---HHH-HHHHHHHHHhCCCeeeeeeccCCceeEecCCCCCCcccCceeEEeccccCCCCCHHHHHH
Confidence 4456788888875 232 57889999999985 4444433 244444332222222221 45566555
Q ss_pred H---HHHhCCCCcEEEEEEc
Q 015544 225 Y---LHHEYPKAPLFAIGTS 241 (405)
Q Consensus 225 ~---l~~~~~~~~i~lvG~S 241 (405)
. .++.||+.-|-++|+.
T Consensus 141 Ei~eC~kayP~~yIRiigFD 160 (176)
T PLN02289 141 ELEEAKKAYPNAFIRIIGFD 160 (176)
T ss_pred HHHHHHHHCCcceEEEEEEE
Confidence 4 4678999888899875
No 352
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=24.43 E-value=1.1e+02 Score=26.29 Aligned_cols=32 Identities=19% Similarity=-0.037 Sum_probs=22.7
Q ss_pred HHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh
Q 015544 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 221 ~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
.+++.+.++. ..+=.++|.|.||.++..++..
T Consensus 16 Gvl~~L~e~~-~~~d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 16 GALKALEEAG-ILKKRVAGTSAGAITAALLALG 47 (194)
T ss_pred HHHHHHHHcC-CCcceEEEECHHHHHHHHHHcC
Confidence 4555555442 2346899999999999888764
No 353
>PRK10279 hypothetical protein; Provisional
Probab=24.37 E-value=1.1e+02 Score=28.89 Aligned_cols=33 Identities=24% Similarity=0.216 Sum_probs=23.3
Q ss_pred HHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 015544 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 221 ~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
-+++.+.+. +-..-.++|.|+|+.++..|+...
T Consensus 22 GVL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 22 GVINALKKV-GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 345555443 223578999999999999998653
No 354
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=24.16 E-value=1.4e+02 Score=29.76 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=31.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHh-hCCCeEEEEeC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTA-KRGWNVVVSNH 197 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~-~~Gy~vv~~d~ 197 (405)
.+|.++++-|.+|.........++..+. +.|.+|.++|.
T Consensus 97 ~~p~vi~~vG~~GsGKTTtaakLA~~l~~~~g~kV~lV~~ 136 (428)
T TIGR00959 97 KPPTVILMVGLQGSGKTTTCGKLAYYLKKKQGKKVLLVAC 136 (428)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 4688999999998777777778888876 57888877765
No 355
>PF06866 DUF1256: Protein of unknown function (DUF1256); InterPro: IPR009665 This family consists of several uncharacterised bacterial proteins, which seem to be specific to the orders Clostridia and Bacillales. Family members are typically around 180 residues in length. The function of this family is unknown.
Probab=24.15 E-value=3.4e+02 Score=23.05 Aligned_cols=73 Identities=18% Similarity=0.244 Sum_probs=44.2
Q ss_pred CCcEEEEeCCC---CCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcE
Q 015544 159 TTPIAIVIPGL---TSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPL 235 (405)
Q Consensus 159 ~~P~VvllHG~---~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i 235 (405)
.+++|++|=|. +|++-.+.+..+.......++.|+ |--+. | -.+.-+.+.++.++++|++.-+
T Consensus 24 ~~~iv~lCIGTDRstGDsLGPLVGt~L~~~~~~~~~Vy-------GTL~~--P-----VHA~NL~e~l~~I~~~~~~~~I 89 (163)
T PF06866_consen 24 NREIVFLCIGTDRSTGDSLGPLVGTKLKEMGFPNFNVY-------GTLDE--P-----VHALNLEETLNEIKKKHPNPFI 89 (163)
T ss_pred CCCEEEEEECCCCCccccccchhhHHHHhcCCCCceEE-------ECCCC--C-----cchhhHHHHHHHHHHHCCCCeE
Confidence 67889999994 344444443333333222223343 21111 1 1235688999999999998889
Q ss_pred EEEEEcHHHH
Q 015544 236 FAIGTSIGAN 245 (405)
Q Consensus 236 ~lvG~S~GG~ 245 (405)
+++=-|+|-.
T Consensus 90 IAIDAcLG~~ 99 (163)
T PF06866_consen 90 IAIDACLGRP 99 (163)
T ss_pred EEEECCCCCc
Confidence 9998888844
No 356
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=24.11 E-value=5.8e+02 Score=23.61 Aligned_cols=76 Identities=9% Similarity=0.105 Sum_probs=48.1
Q ss_pred HHHHHHHhh-CCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCCC
Q 015544 179 RHLVFNTAK-RGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGEK 257 (405)
Q Consensus 179 ~~~~~~l~~-~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~~ 257 (405)
......+.+ .++.++.+|-.|.... ..+.+.++.+.+...-|...+.++.-++++.-+...+..+..
T Consensus 143 ~~~l~~l~~~~~~D~ViIDt~Gr~~~-----------~~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~- 210 (270)
T PRK06731 143 TRALTYFKEEARVDYILIDTAGKNYR-----------ASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKD- 210 (270)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCcC-----------CHHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCC-
Confidence 444555554 4799999999986421 124455555555444454445566677888888887777654
Q ss_pred CCceEEEEE
Q 015544 258 TPVAGAAAI 266 (405)
Q Consensus 258 ~~v~~~v~i 266 (405)
..++++|+-
T Consensus 211 ~~~~~~I~T 219 (270)
T PRK06731 211 IHIDGIVFT 219 (270)
T ss_pred CCCCEEEEE
Confidence 367777743
No 357
>PRK09435 membrane ATPase/protein kinase; Provisional
Probab=24.08 E-value=1.5e+02 Score=28.48 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=32.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
.++.+|-+.|..|...+.++..++..+.++|++|.+++.
T Consensus 54 ~~~~~igi~G~~GaGKSTl~~~l~~~l~~~g~~v~vi~~ 92 (332)
T PRK09435 54 GNALRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAV 92 (332)
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 567899999999988888889999999988887766654
No 358
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=24.04 E-value=1.2e+02 Score=27.78 Aligned_cols=35 Identities=14% Similarity=0.314 Sum_probs=29.7
Q ss_pred EEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 164 vllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
++++|-.|+..+..++.+...+.++|.|+|-++.-
T Consensus 55 vLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k~ 89 (249)
T PF05673_consen 55 VLLWGARGTGKSSLVKALLNEYADQGLRLIEVSKE 89 (249)
T ss_pred eEEecCCCCCHHHHHHHHHHHHhhcCceEEEECHH
Confidence 46799888888888999999999999999888653
No 359
>PRK06114 short chain dehydrogenase; Provisional
Probab=24.04 E-value=2.8e+02 Score=24.72 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=22.9
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
++++-|.+++ .-+.+++.+.++|++|++.+.+.
T Consensus 10 ~~lVtG~s~g----IG~~ia~~l~~~G~~v~~~~r~~ 42 (254)
T PRK06114 10 VAFVTGAGSG----IGQRIAIGLAQAGADVALFDLRT 42 (254)
T ss_pred EEEEECCCch----HHHHHHHHHHHCCCEEEEEeCCc
Confidence 4455564322 23578889999999999998754
No 360
>PTZ00445 p36-lilke protein; Provisional
Probab=23.99 E-value=5.3e+02 Score=23.09 Aligned_cols=90 Identities=14% Similarity=0.016 Sum_probs=54.5
Q ss_pred HHHHHHHHhhCCCeEEEEeCCCC------CCCCCC--CCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHHHH----
Q 015544 178 IRHLVFNTAKRGWNVVVSNHRGL------GGVSIT--SDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIGAN---- 245 (405)
Q Consensus 178 ~~~~~~~l~~~Gy~vv~~d~rG~------G~s~~~--~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~---- 245 (405)
.+.+++.|.+.|.++++.|+=-. |+--.+ .....-..-+.++.+++..+++. +-++.+|-+|==..
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~--~I~v~VVTfSd~~~~~~~ 108 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS--NIKISVVTFSDKELIPSE 108 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC--CCeEEEEEccchhhcccc
Confidence 57889999999999999998431 111111 11111112356788888887664 34799999986433
Q ss_pred ----------HHHHHHhhcCCCCCceEEEEEcCC
Q 015544 246 ----------ILVKYLGEEGEKTPVAGAAAICSP 269 (405)
Q Consensus 246 ----------ia~~yl~~~~~~~~v~~~v~i~~~ 269 (405)
++-..+....-+..++.+.+..|+
T Consensus 109 ~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~ 142 (219)
T PTZ00445 109 NRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPK 142 (219)
T ss_pred CCcceechHHHHHHHHHhcCccceeeeeeeeCCc
Confidence 443333323333357777777776
No 361
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=23.97 E-value=1.3e+02 Score=29.25 Aligned_cols=43 Identities=14% Similarity=0.279 Sum_probs=36.9
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 160 TPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 160 ~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
++.+|-+=|..|+.....+..+++.|.++||+|.++-+-+|+.
T Consensus 204 ~~~~~~~~g~~~~GKtt~~~~l~~~l~~~g~~v~~iKh~~h~~ 246 (366)
T PRK14489 204 APPLLGVVGYSGTGKTTLLEKLIPELIARGYRIGLIKHSHHRV 246 (366)
T ss_pred CccEEEEecCCCCCHHHHHHHHHHHHHHcCCEEEEEEECCccc
Confidence 3558888888887788888999999999999999999988763
No 362
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=23.90 E-value=1.4e+02 Score=26.60 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=25.4
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
|.++-+=+|...+....+++..++++|++|+++|.--
T Consensus 3 i~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 39 (251)
T TIGR01969 3 ITIASGKGGTGKTTITANLGVALAKLGKKVLALDADI 39 (251)
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3344333343345555678888999999999999854
No 363
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=23.71 E-value=62 Score=27.93 Aligned_cols=35 Identities=11% Similarity=0.224 Sum_probs=23.2
Q ss_pred EEEEeCCCCCCC-ccHHHHHHHHHHhhCCCeEEEEe
Q 015544 162 IAIVIPGLTSDS-AASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 162 ~VvllHG~~g~s-~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
-||++|-..... ....+..+++.+.++||+.+.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 488999411111 12345778889999999998764
No 364
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=23.57 E-value=1.3e+02 Score=27.37 Aligned_cols=35 Identities=17% Similarity=0.031 Sum_probs=25.7
Q ss_pred CCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 168 GLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 168 G~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
|=+|.....-.-+++..|+++|++|+++|.=-.|+
T Consensus 7 gKGGVGKTT~~~nLA~~La~~g~rVLliD~D~q~~ 41 (268)
T TIGR01281 7 GKGGIGKSTTSSNLSVAFAKLGKRVLQIGCDPKHD 41 (268)
T ss_pred cCCcCcHHHHHHHHHHHHHhCCCeEEEEecCcccc
Confidence 64454455555778889999999999999865543
No 365
>TIGR03282 methan_mark_13 putative methanogenesis marker 13 metalloprotein. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. This metal cluster-binding family is related to nitrogenase structural protein NifD and accessory protein NifE, among others.
Probab=23.53 E-value=1.7e+02 Score=28.14 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=44.3
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEE
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGT 240 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~ 240 (405)
-.++++||-.||..... ..+...+.++.+-++ +....-+|-.+-+.+.++.+.++++..-+++++.
T Consensus 19 ~aVpIlHGPsGCa~~~~-----r~l~~~~~~v~sT~L---------~E~DvVFGGeeKL~eaI~ea~e~y~P~lI~VvTT 84 (352)
T TIGR03282 19 VDVIILHGPSGCCFRTA-----RLLEEDGVRVFTTGM---------DENDFVFGASEKLVKVIRYAEEKFKPELIGVVGT 84 (352)
T ss_pred CCEEEEECchhhhhhhh-----hhccCCCCceeccCC---------CCCceEeCcHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 35889999888753211 112222333332222 1222334556789999999999987667888887
Q ss_pred cHHHHHH
Q 015544 241 SIGANIL 247 (405)
Q Consensus 241 S~GG~ia 247 (405)
..-+.+.
T Consensus 85 CvseIIG 91 (352)
T TIGR03282 85 CASMIIG 91 (352)
T ss_pred Cchhhcc
Confidence 7777663
No 366
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=23.38 E-value=1.4e+02 Score=26.91 Aligned_cols=40 Identities=23% Similarity=0.356 Sum_probs=31.6
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
++.+=|..|+.....+..++..|.++|++|.++.+-+|+.
T Consensus 3 vi~ivG~~gsGKTtl~~~l~~~L~~~G~~V~viK~~~~~~ 42 (229)
T PRK14494 3 AIGVIGFKDSGKTTLIEKILKNLKERGYRVATAKHTHHEF 42 (229)
T ss_pred EEEEECCCCChHHHHHHHHHHHHHhCCCeEEEEEecccCC
Confidence 5566676666666777889999999999999999877653
No 367
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=23.17 E-value=1.6e+02 Score=28.81 Aligned_cols=42 Identities=17% Similarity=0.133 Sum_probs=28.5
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
.+|.+...=+|...+....+++..|+.+|++|+++|.=-.|.
T Consensus 105 ~vI~v~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~DpQ~~ 146 (387)
T TIGR03453 105 QVIAVTNFKGGSGKTTTAAHLAQYLALRGYRVLAIDLDPQAS 146 (387)
T ss_pred eEEEEEccCCCcCHHHHHHHHHHHHHhcCCCEEEEecCCCCC
Confidence 445444444444445555678888999999999999865543
No 368
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=23.09 E-value=1.5e+02 Score=26.41 Aligned_cols=57 Identities=16% Similarity=0.230 Sum_probs=35.8
Q ss_pred HHHHHHHhhCCCeEEEEeCCCC--CCCCCCCCCccc----CCChhHHHHHHHHHHHhCCCCcE
Q 015544 179 RHLVFNTAKRGWNVVVSNHRGL--GGVSITSDCFYN----AGWTEDAREVIGYLHHEYPKAPL 235 (405)
Q Consensus 179 ~~~~~~l~~~Gy~vv~~d~rG~--G~s~~~~~~~~~----~~~~~Dl~~~l~~l~~~~~~~~i 235 (405)
..+++.+.+.|-.|++.-.|-- .......+.++. -+..+-.+++++++++.||+-.+
T Consensus 19 l~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 19 LALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV 81 (245)
T ss_pred HHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence 6789999999999988654421 111111232322 13335678899999999996443
No 369
>smart00245 TSPc tail specific protease. tail specific protease
Probab=22.88 E-value=2e+02 Score=24.86 Aligned_cols=55 Identities=16% Similarity=0.175 Sum_probs=36.3
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHH
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHH 228 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~ 228 (405)
-.|-+..+.... ...+......+.+.+..-+++|+|+.++ |.......++.++..
T Consensus 31 gYi~i~~f~~~~-~~~~~~~~~~l~~~~~~~lIiDLR~N~G-----------G~~~~~~~~~~~f~~ 85 (192)
T smart00245 31 GYIRIPEFSEHT-SNLVEKAWKKLEKTNVEGLILDLRNNPG-----------GLLSAAIDVSSLFLD 85 (192)
T ss_pred EEEEEeEEChhh-HHHHHHHHHHHHhCCCcEEEEEecCCCC-----------CCHHHHHHHHHHhcC
Confidence 355666765432 2334777888888899999999999754 234555556666543
No 370
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=22.86 E-value=1.8e+02 Score=24.54 Aligned_cols=40 Identities=20% Similarity=0.263 Sum_probs=32.8
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
++.+=|..|+-....+..++..+..+|++|.++.+-+|+.
T Consensus 3 vi~i~G~~gsGKTTli~~L~~~l~~~g~~V~~iK~~~~~~ 42 (159)
T cd03116 3 VIGFVGYSGSGKTTLLEKLIPALSARGLRVAVIKHDHHDF 42 (159)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCCcc
Confidence 5667777777777888999999999999999998887753
No 371
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.84 E-value=1.2e+02 Score=27.67 Aligned_cols=36 Identities=22% Similarity=0.187 Sum_probs=24.0
Q ss_pred HHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcCC
Q 015544 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEGE 256 (405)
Q Consensus 221 ~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~~ 256 (405)
-+++.+.+..-...=.++|.|.||.++..|+.....
T Consensus 15 Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 15 GVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 445555544221134899999999999998876543
No 372
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=22.75 E-value=1.6e+02 Score=26.47 Aligned_cols=38 Identities=16% Similarity=0.147 Sum_probs=26.7
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCC
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG 199 (405)
+|.+.-+=+|...+.....++..++++|++|+++|.--
T Consensus 3 ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~ 40 (261)
T TIGR01968 3 VIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADI 40 (261)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 34444444444455556778888999999999999854
No 373
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in R. etli Sym plasmid. This operon is involved in the plasmid replication and partition.
Probab=22.59 E-value=1.6e+02 Score=22.07 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=20.7
Q ss_pred CCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 171 SDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 171 g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
|...+.....++..++++|.+|+++|.=
T Consensus 10 G~Gkst~~~~la~~~~~~~~~vl~~d~d 37 (104)
T cd02042 10 GVGKTTTAVNLAAALARRGKRVLLIDLD 37 (104)
T ss_pred CcCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3334455677888888899999999853
No 374
>PRK14974 cell division protein FtsY; Provisional
Probab=22.45 E-value=1.6e+02 Score=28.32 Aligned_cols=38 Identities=26% Similarity=0.538 Sum_probs=31.8
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
.+|.++++-|.+|.....-+..++..+.++|++|++.+
T Consensus 138 ~~~~vi~~~G~~GvGKTTtiakLA~~l~~~g~~V~li~ 175 (336)
T PRK14974 138 GKPVVIVFVGVNGTGKTTTIAKLAYYLKKNGFSVVIAA 175 (336)
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 45789999999887777777889998988999998875
No 375
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=22.41 E-value=1.1e+02 Score=29.11 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=21.3
Q ss_pred HHHHHHhC-CCCcEEEEEEcHHHHHHHHHHh
Q 015544 223 IGYLHHEY-PKAPLFAIGTSIGANILVKYLG 252 (405)
Q Consensus 223 l~~l~~~~-~~~~i~lvG~S~GG~ia~~yl~ 252 (405)
.+.+.++. +..+.++.|||+|=..++..++
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 33444545 5678899999999888775544
No 376
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=22.20 E-value=3e+02 Score=19.70 Aligned_cols=53 Identities=13% Similarity=0.230 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcE
Q 015544 177 YIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPL 235 (405)
Q Consensus 177 y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i 235 (405)
|...+.+.+++.+.+++.-+.-- .+-..|-.+...++..++..+.++||++.+
T Consensus 17 ~d~~i~~~l~~~~v~ii~K~~nA------Ntit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 17 YDLEILELLQRFKVSIIAKDTNA------NTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHHHcCCeEEEEecCC------CeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 66788999999999999885421 112234445567899999999999997655
No 377
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=22.17 E-value=1.4e+02 Score=27.43 Aligned_cols=38 Identities=16% Similarity=0.109 Sum_probs=27.1
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G 201 (405)
|-+. |=+|...+...-+++..|+++|++|+++|.=-.|
T Consensus 4 iav~-~KGGVGKTT~~~nLA~~La~~G~rVLlID~Dpq~ 41 (274)
T PRK13235 4 VAIY-GKGGIGKSTTTQNTVAGLAEMGKKVMVVGCDPKA 41 (274)
T ss_pred EEEe-CCCCccHHHHHHHHHHHHHHCCCcEEEEecCCcc
Confidence 4455 5444445555678899999999999999884443
No 378
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.12 E-value=4.8e+02 Score=26.52 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=44.5
Q ss_pred EEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEEEcHH
Q 015544 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIGTSIG 243 (405)
Q Consensus 164 vllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG~S~G 243 (405)
+|=-|++++ .....+.-++++..+||.||.+|--|.-.- -.-+...+..+........|..||--+=
T Consensus 442 lfekGYgkd-~a~vak~AI~~a~~~gfDVvLiDTAGR~~~------------~~~lm~~l~k~~~~~~pd~i~~vgealv 508 (587)
T KOG0781|consen 442 LFEKGYGKD-AAGVAKEAIQEARNQGFDVVLIDTAGRMHN------------NAPLMTSLAKLIKVNKPDLILFVGEALV 508 (587)
T ss_pred HHhhhcCCC-hHHHHHHHHHHHHhcCCCEEEEeccccccC------------ChhHHHHHHHHHhcCCCceEEEehhhhh
Confidence 455677554 444446667778889999999997763211 1223333444433333347888888777
Q ss_pred HHHHHH
Q 015544 244 ANILVK 249 (405)
Q Consensus 244 G~ia~~ 249 (405)
|+=++.
T Consensus 509 g~dsv~ 514 (587)
T KOG0781|consen 509 GNDSVD 514 (587)
T ss_pred CcHHHH
Confidence 776653
No 379
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=22.08 E-value=4.5e+02 Score=21.62 Aligned_cols=73 Identities=18% Similarity=0.251 Sum_probs=39.2
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCCcEEEEE
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKAPLFAIG 239 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 239 (405)
+.-++-.|..|.........+...+.....+++++..=+....... ......+++.++++.+++. +.++++++
T Consensus 36 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~pd~v~i~~G~ND~~~~~----~~~~~~~~l~~li~~~~~~--~~~vil~~ 108 (177)
T cd01822 36 DVTVINAGVSGDTTAGGLARLPALLAQHKPDLVILELGGNDGLRGI----PPDQTRANLRQMIETAQAR--GAPVLLVG 108 (177)
T ss_pred CeEEEecCcCCcccHHHHHHHHHHHHhcCCCEEEEeccCcccccCC----CHHHHHHHHHHHHHHHHHC--CCeEEEEe
Confidence 4556777777665554444555555555677777764221110101 0112345677777777665 44666665
No 380
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.05 E-value=1.5e+02 Score=26.46 Aligned_cols=31 Identities=23% Similarity=0.130 Sum_probs=21.5
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhh
Q 015544 222 VIGYLHHEYPKAPLFAIGTSIGANILVKYLGE 253 (405)
Q Consensus 222 ~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~ 253 (405)
+++.+.++ ....-.++|.|.||.++..++..
T Consensus 18 vL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 18 FLAALLEM-GLEPSAISGTSAGALVGGLFASG 48 (221)
T ss_pred HHHHHHHc-CCCceEEEEeCHHHHHHHHHHcC
Confidence 44444443 22345799999999999988853
No 381
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=22.03 E-value=4.2e+02 Score=23.45 Aligned_cols=91 Identities=18% Similarity=0.157 Sum_probs=47.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCe-EEEEeCCCCC--CCCC------CCCCc-ccCCChhHHHH------H
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWN-VVVSNHRGLG--GVSI------TSDCF-YNAGWTEDARE------V 222 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~-vv~~d~rG~G--~s~~------~~~~~-~~~~~~~Dl~~------~ 222 (405)
..+.|++++--.+. ...+...+.+.+.+.|++ +..++.+... ..+. ..+.. ...+.+.-+.. +
T Consensus 28 ~~~~i~~iptA~~~-~~~~~~~~~~~~~~lG~~~v~~~~~~~~~~a~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~l 106 (217)
T cd03145 28 AGARIVVIPAASEE-PAEVGEEYRDVFERLGAREVEVLVIDSREAANDPEVVARLRDADGIFFTGGDQLRITSALGGTPL 106 (217)
T ss_pred CCCcEEEEeCCCcC-hhHHHHHHHHHHHHcCCceeEEeccCChHHcCCHHHHHHHHhCCEEEEeCCcHHHHHHHHcCChH
Confidence 34567777764433 455667777888888884 5555554211 1110 01111 12233322222 2
Q ss_pred HHHHHHhCCCCcEEEEEEcHHHHHHHHHH
Q 015544 223 IGYLHHEYPKAPLFAIGTSIGANILVKYL 251 (405)
Q Consensus 223 l~~l~~~~~~~~i~lvG~S~GG~ia~~yl 251 (405)
.+.|+..+. .-..++|.|.|+++...+.
T Consensus 107 ~~~l~~~~~-~G~v~~G~SAGA~i~~~~~ 134 (217)
T cd03145 107 LDALRKVYR-GGVVIGGTSAGAAVMSDTM 134 (217)
T ss_pred HHHHHHHHH-cCCEEEEccHHHHhhhhcc
Confidence 222333332 2478999999999987653
No 382
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=21.97 E-value=1.8e+02 Score=28.14 Aligned_cols=38 Identities=18% Similarity=0.222 Sum_probs=28.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS 204 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~ 204 (405)
|+++|+-. ...| +++++.|.++|+.|.++-..+.+..+
T Consensus 2 il~~~~~~---p~~~-~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNF---PGQF-RHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCC---chhH-HHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 67888732 2234 89999999999999999888866543
No 383
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=21.69 E-value=1.6e+02 Score=23.29 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=24.2
Q ss_pred EeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 165 VIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 165 llHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
++-|-+|...+.....++..++++|.+|+++|.
T Consensus 3 ~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~ 35 (116)
T cd02034 3 AITGKGGVGKTTIAALLARYLAEKGKPVLAIDA 35 (116)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEC
Confidence 445555555566667778888889999999985
No 384
>PRK06398 aldose dehydrogenase; Validated
Probab=21.69 E-value=3.9e+02 Score=24.00 Aligned_cols=63 Identities=14% Similarity=0.194 Sum_probs=37.4
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCcc--cCCChhHHHHHHHHHHHhCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFY--NAGWTEDAREVIGYLHHEYPK 232 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~--~~~~~~Dl~~~l~~l~~~~~~ 232 (405)
.+++-|..++ .-+.+++.+.++|++|++.+...-... .-... .....+++.++++.+.++++.
T Consensus 8 ~vlItGas~g----IG~~ia~~l~~~G~~Vi~~~r~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 8 VAIVTGGSQG----IGKAVVNRLKEEGSNVINFDIKEPSYN---DVDYFKVDVSNKEQVIKGIDYVISKYGR 72 (258)
T ss_pred EEEEECCCch----HHHHHHHHHHHCCCeEEEEeCCccccC---ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4455553322 235788899999999999876432110 01111 123346788888888777653
No 385
>PF13721 SecD-TM1: SecD export protein N-terminal TM region
Probab=21.63 E-value=1.3e+02 Score=23.27 Aligned_cols=25 Identities=24% Similarity=0.516 Sum_probs=20.8
Q ss_pred ccchHHHHHHHHHHHHHHHhhhhee
Q 015544 29 LIPISHYVLALSLLFVIVIYNFLEF 53 (405)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~ 53 (405)
.-|.|-|++++++++++++|-+-++
T Consensus 3 ~yp~WKyllil~vl~~~~lyALPnl 27 (101)
T PF13721_consen 3 RYPLWKYLLILVVLLLGALYALPNL 27 (101)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhc
Confidence 4578999999888888888888876
No 386
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=21.62 E-value=1.4e+02 Score=27.75 Aligned_cols=33 Identities=24% Similarity=0.118 Sum_probs=23.0
Q ss_pred HHHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhc
Q 015544 221 EVIGYLHHEYPKAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 221 ~~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
-+++.+.+. ....=.+.|.|+|+.++..|+...
T Consensus 27 GVL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEA-GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHc-CCCccEEEEECHHHHHHHHHHcCC
Confidence 344555443 222458999999999999998754
No 387
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=21.46 E-value=2e+02 Score=27.69 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=25.9
Q ss_pred CCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCC
Q 015544 171 SDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVS 204 (405)
Q Consensus 171 g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~ 204 (405)
|+.....+..+++.+.++|+++.++ -||+|+..
T Consensus 68 GTGKTP~v~~La~~l~~~G~~~~Il-SRGYg~~~ 100 (338)
T PRK01906 68 GTGKTPTVIALVDALRAAGFTPGVV-SRGYGAKI 100 (338)
T ss_pred CCChHHHHHHHHHHHHHcCCceEEE-ecCCCCCC
Confidence 4446777888999999999998665 58998754
No 388
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=21.42 E-value=3.5e+02 Score=23.95 Aligned_cols=53 Identities=11% Similarity=-0.034 Sum_probs=32.0
Q ss_pred HHHHHHHhhCCCeEEEEeCCCCCCCCCCCCCccc--CCChhHHHHHHHHHHHhCCC
Q 015544 179 RHLVFNTAKRGWNVVVSNHRGLGGVSITSDCFYN--AGWTEDAREVIGYLHHEYPK 232 (405)
Q Consensus 179 ~~~~~~l~~~Gy~vv~~d~rG~G~s~~~~~~~~~--~~~~~Dl~~~l~~l~~~~~~ 232 (405)
..+++.+.++|++|++.+........ .....+. ....+++.++++.+.++++.
T Consensus 22 ~~la~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 22 YAVALAFVEAGAKVIGFDQAFLTQED-YPFATFVLDVSDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred HHHHHHHHHCCCEEEEEecchhhhcC-CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 56788899999999999875411100 0011111 23346778888887777653
No 389
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=21.39 E-value=1.9e+02 Score=22.39 Aligned_cols=74 Identities=14% Similarity=0.230 Sum_probs=45.3
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCC-CeEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHHhCCCC-cE
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRG-WNVVVSNHRGLGGVSITSDCFYNAGWTEDAREVIGYLHHEYPKA-PL 235 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~G-y~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~-~i 235 (405)
...|+|+++-|........|-...+..|...| .....+|-- .-+|+++-+.... ..|.- ++
T Consensus 13 ~~n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnVL----------------~d~eiR~~lk~~s-~WPT~PQL 75 (105)
T COG0278 13 KENPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYVDVL----------------QDPEIRQGLKEYS-NWPTFPQL 75 (105)
T ss_pred hcCceEEEecCCCCCCCCCccHHHHHHHHHcCCcceeEEeec----------------cCHHHHhccHhhc-CCCCCcee
Confidence 46799999999887777777778888888887 344444431 1145655554332 22321 36
Q ss_pred EEEEEcHHHHHHH
Q 015544 236 FAIGTSIGANILV 248 (405)
Q Consensus 236 ~lvG~S~GG~ia~ 248 (405)
++=|-=.||.=.+
T Consensus 76 yi~GEfvGG~DIv 88 (105)
T COG0278 76 YVNGEFVGGCDIV 88 (105)
T ss_pred eECCEEeccHHHH
Confidence 6666555665444
No 390
>PF08248 Tryp_FSAP: Tryptophyllin-3 skin active peptide; InterPro: IPR013266 PdT-3 or Tryptophyllin-3 peptide is a subfamily of the family Tryptophyllin and of the superfamily FSAP (Frog Skin Active Peptide). Originally identified in skin extracts of Neotropical leaf frogs, Phyllomedusa sp. This subfamily has an average length of 13 amino acids. The pharmacological activity of the tryptophyllins remains to be established [] but it seems that these peptides possess an action on liver protein synthesis and body weight []. It is thought to possesses insulin-releasing activity [].
Probab=21.35 E-value=55 Score=14.57 Aligned_cols=7 Identities=14% Similarity=0.396 Sum_probs=4.3
Q ss_pred CCccCCC
Q 015544 91 GRYLVTP 97 (405)
Q Consensus 91 ~~y~p~~ 97 (405)
++|+|+|
T Consensus 2 kpfw~pp 8 (12)
T PF08248_consen 2 KPFWPPP 8 (12)
T ss_pred CccCCCC
Confidence 4567665
No 391
>PF06024 DUF912: Nucleopolyhedrovirus protein of unknown function (DUF912); InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=21.35 E-value=62 Score=25.02 Aligned_cols=24 Identities=29% Similarity=0.422 Sum_probs=15.2
Q ss_pred cchHHHHHHHHHHHHHHHhhhhee
Q 015544 30 IPISHYVLALSLLFVIVIYNFLEF 53 (405)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~ 53 (405)
+.+....++.++++++++|||.=+
T Consensus 64 ili~lls~v~IlVily~IyYFVIL 87 (101)
T PF06024_consen 64 ILISLLSFVCILVILYAIYYFVIL 87 (101)
T ss_pred hHHHHHHHHHHHHHHhhheEEEEE
Confidence 344445555666777888887754
No 392
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A.
Probab=21.21 E-value=1.1e+02 Score=25.71 Aligned_cols=43 Identities=23% Similarity=0.332 Sum_probs=26.3
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCC
Q 015544 158 DTTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (405)
Q Consensus 158 ~~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~ 200 (405)
...+.+++++|-.|...+..++.+...+.+.+..++..+....
T Consensus 21 ~~~~~~~ll~G~~G~GKT~ll~~~~~~~~~~~~~~~~~~~~~~ 63 (185)
T PF13191_consen 21 SGSPRNLLLTGESGSGKTSLLRALLDRLAERGGYVISINCDDS 63 (185)
T ss_dssp S-----EEE-B-TTSSHHHHHHHHHHHHHHHT--EEEEEEETT
T ss_pred cCCCcEEEEECCCCCCHHHHHHHHHHHHHhcCCEEEEEEEecc
Confidence 3456788999999988888888888888876434777776544
No 393
>PRK07952 DNA replication protein DnaC; Validated
Probab=21.05 E-value=1.4e+02 Score=27.19 Aligned_cols=34 Identities=12% Similarity=0.204 Sum_probs=28.5
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
-++++|-+|...+.....++..+.++|..|+.++
T Consensus 101 ~~~l~G~~GtGKThLa~aia~~l~~~g~~v~~it 134 (244)
T PRK07952 101 SFIFSGKPGTGKNHLAAAICNELLLRGKSVLIIT 134 (244)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEE
Confidence 5688898888788888889999998899988874
No 394
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=21.03 E-value=1.4e+02 Score=26.45 Aligned_cols=33 Identities=30% Similarity=0.196 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCcEEEEEEcHHHHHHHHHHhhcC
Q 015544 222 VIGYLHHEYPKAPLFAIGTSIGANILVKYLGEEG 255 (405)
Q Consensus 222 ~l~~l~~~~~~~~i~lvG~S~GG~ia~~yl~~~~ 255 (405)
+++.+.+... ..=.++|.|.|+.++..++...+
T Consensus 16 vl~aL~e~g~-~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGI-EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCc
Confidence 4555555432 35689999999999998887653
No 395
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=21.01 E-value=2e+02 Score=26.13 Aligned_cols=40 Identities=13% Similarity=0.088 Sum_probs=29.3
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV 203 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s 203 (405)
|.+. |=+|...+....+++..|+++|++|+++|.=-.|..
T Consensus 4 iav~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dpq~n~ 43 (270)
T cd02040 4 IAIY-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDPKADS 43 (270)
T ss_pred EEEE-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCCCCCc
Confidence 4445 644544566667889999999999999998666543
No 396
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=20.85 E-value=1.3e+02 Score=23.45 Aligned_cols=35 Identities=17% Similarity=0.234 Sum_probs=25.4
Q ss_pred EEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCC
Q 015544 164 IVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLG 201 (405)
Q Consensus 164 vllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G 201 (405)
|++||-.|+.....++.+++.+ |+.++-+|..-..
T Consensus 1 ill~G~~G~GKT~l~~~la~~l---~~~~~~i~~~~~~ 35 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL---GFPFIEIDGSELI 35 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT---TSEEEEEETTHHH
T ss_pred CEEECcCCCCeeHHHHHHHhhc---ccccccccccccc
Confidence 6899998877776666666554 6888888876543
No 397
>PRK08116 hypothetical protein; Validated
Probab=20.76 E-value=1.4e+02 Score=27.53 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=29.3
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNH 197 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~ 197 (405)
-++++|-.|...+.....++..+.++|+.|+..+.
T Consensus 116 gl~l~G~~GtGKThLa~aia~~l~~~~~~v~~~~~ 150 (268)
T PRK08116 116 GLLLWGSVGTGKTYLAACIANELIEKGVPVIFVNF 150 (268)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEH
Confidence 46889988887888888889999888999988874
No 398
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=20.74 E-value=1.2e+02 Score=27.93 Aligned_cols=21 Identities=33% Similarity=0.422 Sum_probs=17.2
Q ss_pred CCcEEEEEEcHHHHHHHHHHh
Q 015544 232 KAPLFAIGTSIGANILVKYLG 252 (405)
Q Consensus 232 ~~~i~lvG~S~GG~ia~~yl~ 252 (405)
-.+-.++|||+|=..++..++
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 568899999999988776554
No 399
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=20.72 E-value=1.9e+02 Score=27.38 Aligned_cols=45 Identities=20% Similarity=0.307 Sum_probs=31.3
Q ss_pred CCcEEEEeCC--CCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCCCC
Q 015544 159 TTPIAIVIPG--LTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGVSI 205 (405)
Q Consensus 159 ~~P~VvllHG--~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s~~ 205 (405)
..|+| .+=. .+|+.....+..+++.+.++|+++.++ -||+|+...
T Consensus 27 ~vPVI-sVGNitvGGTGKTP~v~~La~~l~~~G~~~~Il-SRGYg~~~~ 73 (311)
T TIGR00682 27 PVPVV-IVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVL-SRGYGSKTK 73 (311)
T ss_pred CCCEE-EEeccccCCcChHHHHHHHHHHHHHCCCEEEEE-CCCCCCCCC
Confidence 45555 3432 234456788889999999999998766 579997543
No 400
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=20.62 E-value=1.5e+02 Score=26.63 Aligned_cols=34 Identities=15% Similarity=-0.022 Sum_probs=23.3
Q ss_pred HHHHHHHHhC-CCCcEEEEEEcHHHHHHHHHHhhc
Q 015544 221 EVIGYLHHEY-PKAPLFAIGTSIGANILVKYLGEE 254 (405)
Q Consensus 221 ~~l~~l~~~~-~~~~i~lvG~S~GG~ia~~yl~~~ 254 (405)
-+++.+.++. ....-.++|.|.|+.++..|+...
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 4455555542 112347999999999999998754
No 401
>PLN02335 anthranilate synthase
Probab=20.40 E-value=5e+02 Score=23.11 Aligned_cols=87 Identities=16% Similarity=0.132 Sum_probs=46.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC--CCCCC-Cc-cc--CCChhHHHHHHHHHHHhCCC
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV--SITSD-CF-YN--AGWTEDAREVIGYLHHEYPK 232 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s--~~~~~-~~-~~--~~~~~Dl~~~l~~l~~~~~~ 232 (405)
..+.|+++... ++ |-..+++.|.+.|+.+.++..--..-. ....+ .. .. .+...|....++.++...
T Consensus 17 ~~~~ilviD~~--ds---ft~~i~~~L~~~g~~~~v~~~~~~~~~~~~~~~~d~iVisgGPg~p~d~~~~~~~~~~~~-- 89 (222)
T PLN02335 17 QNGPIIVIDNY--DS---FTYNLCQYMGELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELG-- 89 (222)
T ss_pred ccCcEEEEECC--CC---HHHHHHHHHHHCCCcEEEEECCCCCHHHHHhcCCCEEEEcCCCCChhhccchHHHHHHhC--
Confidence 34567777763 22 335688889999998888754210000 00000 00 00 122344333444444321
Q ss_pred CcEEEEEEcHHHHHHHHHHh
Q 015544 233 APLFAIGTSIGANILVKYLG 252 (405)
Q Consensus 233 ~~i~lvG~S~GG~ia~~yl~ 252 (405)
..+=++|..+|.-+....++
T Consensus 90 ~~~PiLGIClG~QlLa~alG 109 (222)
T PLN02335 90 PLVPLFGVCMGLQCIGEAFG 109 (222)
T ss_pred CCCCEEEecHHHHHHHHHhC
Confidence 23558999999998776554
No 402
>PF09757 Arb2: Arb2 domain; InterPro: IPR019154 The fission yeast Argonaute siRNA chaperone (ARC) complex contains the Argonaute protein Ago1 and two previously uncharacterised proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation []. This entry represents a region found in both Arb2 and the Hda1 protein. ; PDB: 2VQV_A 2VQO_A 2VQJ_A 2VQQ_B 2VQM_A 2VQW_G.
Probab=20.38 E-value=34 Score=29.46 Aligned_cols=42 Identities=14% Similarity=0.152 Sum_probs=0.0
Q ss_pred CCCcEEEEeCCCCC----------CCccHHHHH-HHHHHhhCCCeEEEEeCCC
Q 015544 158 DTTPIAIVIPGLTS----------DSAASYIRH-LVFNTAKRGWNVVVSNHRG 199 (405)
Q Consensus 158 ~~~P~VvllHG~~g----------~s~~~y~~~-~~~~l~~~Gy~vv~~d~rG 199 (405)
....+||++||.+. +-+..-+.. +++.+.++||.|+++|..-
T Consensus 97 ~~~~llViih~~g~~wa~~~~~~~~l~~gs~~~~~i~~A~~~~~gVI~~N~~~ 149 (178)
T PF09757_consen 97 TAKKLLVIIHGSGVIWARRLIINGGLDSGSQIPQYIKWALKEGYGVIDLNPNQ 149 (178)
T ss_dssp -----------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34567889998432 000000112 5667778899999998753
No 403
>PRK05506 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional
Probab=20.36 E-value=1.5e+02 Score=31.28 Aligned_cols=38 Identities=11% Similarity=0.185 Sum_probs=31.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEe
Q 015544 159 TTPIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSN 196 (405)
Q Consensus 159 ~~P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d 196 (405)
.+|.+|++.|+.|+..+...+.++..+...|..++.+|
T Consensus 458 ~~~~~i~~~G~~gsGKst~a~~l~~~l~~~~~~~~~l~ 495 (632)
T PRK05506 458 QKPATVWFTGLSGSGKSTIANLVERRLHALGRHTYLLD 495 (632)
T ss_pred CCcEEEEecCCCCchHHHHHHHHHHHHHHcCCCEEEEc
Confidence 45889999999998778787888888877788888775
No 404
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=20.32 E-value=6.4e+02 Score=22.72 Aligned_cols=39 Identities=31% Similarity=0.417 Sum_probs=28.4
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCC
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGL 200 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~ 200 (405)
++++.+++.++....++..+++.+.+.|+.|.++.....
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~ 40 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDE 40 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCC
Confidence 466667664444555668899999899999999876553
No 405
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=20.30 E-value=2.1e+02 Score=27.43 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=26.7
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCC
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHR 198 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~r 198 (405)
-+|.+-|-+|...+.....++..++++|++|+++|.-
T Consensus 32 ~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~D 68 (329)
T cd02033 32 QIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGCD 68 (329)
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEee
Confidence 3444558766555665677888899999999998763
No 406
>TIGR02841 spore_YyaC putative sporulation protein YyaC. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, also called YyaC, is a member of that panel and is otherwise uncharacterized. The second round of PSI-BLAST shows many similarities to the germination protease GPR, which is found in exactly the same set of organisms and has a known role in the sporulation/germination process.
Probab=20.19 E-value=4.5e+02 Score=21.71 Aligned_cols=29 Identities=17% Similarity=0.389 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEEcHHHH
Q 015544 217 EDAREVIGYLHHEYPKAPLFAIGTSIGAN 245 (405)
Q Consensus 217 ~Dl~~~l~~l~~~~~~~~i~lvG~S~GG~ 245 (405)
..+.+.++.++++|++.-+.++=-|+|-.
T Consensus 47 ~NL~e~l~~I~~~~~~~~iIAIDAcLG~~ 75 (140)
T TIGR02841 47 KNLEEKLKIIKKKHPNPFIIAIDACLGRT 75 (140)
T ss_pred ccHHHHHHHHHHhCCCCeEEEEECccCCc
Confidence 45888999999999988899998888853
No 407
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=20.18 E-value=1.2e+02 Score=23.43 Aligned_cols=31 Identities=26% Similarity=0.476 Sum_probs=22.4
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhC-CCeEEEEeC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKR-GWNVVVSNH 197 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~-Gy~vv~~d~ 197 (405)
||++-|.+|+..+. +++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGKST----~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKST----LAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHH----HHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHHH----HHHHHHHHHCCeEEEecc
Confidence 57888988765543 55555554 999999988
No 408
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=20.14 E-value=2.4e+02 Score=27.78 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=28.5
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCC
Q 015544 161 PIAIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGG 202 (405)
Q Consensus 161 P~VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~ 202 (405)
.+|.+.-.=+|.....-.-+++..|+.+|++|+++|.=-.|.
T Consensus 122 ~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDpQ~~ 163 (405)
T PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQAS 163 (405)
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCCCCC
Confidence 445455433343444455678889999999999999865554
No 409
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.07 E-value=4.1e+02 Score=23.53 Aligned_cols=66 Identities=6% Similarity=0.145 Sum_probs=37.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHhhCCCeEEEEeCCCCCCC--------CCCCC-Cccc--CCChhHHHHHHHHHHHhCC
Q 015544 163 AIVIPGLTSDSAASYIRHLVFNTAKRGWNVVVSNHRGLGGV--------SITSD-CFYN--AGWTEDAREVIGYLHHEYP 231 (405)
Q Consensus 163 VvllHG~~g~s~~~y~~~~~~~l~~~Gy~vv~~d~rG~G~s--------~~~~~-~~~~--~~~~~Dl~~~l~~l~~~~~ 231 (405)
++++=|.+|. .-..++..|+++|++|++++.+..... ..... .... ....+++..+++.+.++++
T Consensus 4 ~vlItG~sg~----iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 4 VALVTGGRRG----IGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred EEEEeCCCch----HHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 3455553332 235688889999999999987642110 00001 1111 2334677888888877765
Q ss_pred C
Q 015544 232 K 232 (405)
Q Consensus 232 ~ 232 (405)
.
T Consensus 80 ~ 80 (256)
T PRK12745 80 R 80 (256)
T ss_pred C
Confidence 3
No 410
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=20.02 E-value=3.3e+02 Score=22.95 Aligned_cols=78 Identities=13% Similarity=0.169 Sum_probs=41.0
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHhhC---CCeEEEEeCCCCCCCCCC-C-CCcccCCChhHHHHHHHHHHHhCCCCcEE
Q 015544 162 IAIVIPGLTSDSAASYIRHLVFNTAKR---GWNVVVSNHRGLGGVSIT-S-DCFYNAGWTEDAREVIGYLHHEYPKAPLF 236 (405)
Q Consensus 162 ~VvllHG~~g~s~~~y~~~~~~~l~~~---Gy~vv~~d~rG~G~s~~~-~-~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~ 236 (405)
+-++-.|..|.........+-..+.+. ...++++.. |.-..... . .........+.+..+++.+++.+++.+++
T Consensus 33 ~~v~N~g~~G~t~~~~~~~~~~~~~~~~~~~pd~vii~~-G~ND~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ii 111 (199)
T cd01838 33 LDVINRGFSGYNTRWALKVLPKIFLEEKLAQPDLVTIFF-GANDAALPGQPQHVPLDEYKENLRKIVSHLKSLSPKTKVI 111 (199)
T ss_pred hheeccCCCcccHHHHHHHHHHhcCccccCCceEEEEEe-cCccccCCCCCCcccHHHHHHHHHHHHHHHHhhCCCCeEE
Confidence 345667877754444433343344443 467777743 21111100 0 00111223467888888888877777787
Q ss_pred EEEE
Q 015544 237 AIGT 240 (405)
Q Consensus 237 lvG~ 240 (405)
+++.
T Consensus 112 ~~t~ 115 (199)
T cd01838 112 LITP 115 (199)
T ss_pred EeCC
Confidence 7763
Done!