Query 015550
Match_columns 405
No_of_seqs 421 out of 1797
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 07:21:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015550.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015550hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 2.6E-34 5.6E-39 266.7 25.8 275 16-320 9-293 (294)
2 KOG4178 Soluble epoxide hydrol 100.0 7.5E-34 1.6E-38 252.6 20.3 276 16-322 23-321 (322)
3 TIGR02240 PHA_depoly_arom poly 100.0 5.5E-33 1.2E-37 255.4 25.1 263 19-325 6-270 (276)
4 PRK03592 haloalkane dehalogena 100.0 5E-33 1.1E-37 258.2 23.3 274 15-323 7-291 (295)
5 PRK00870 haloalkane dehalogena 100.0 1.1E-32 2.3E-37 256.8 24.5 270 15-321 19-301 (302)
6 PLN02679 hydrolase, alpha/beta 100.0 4.4E-32 9.4E-37 258.0 25.6 274 17-322 63-358 (360)
7 PLN02578 hydrolase 100.0 1.3E-31 2.9E-36 254.4 25.1 273 18-319 69-353 (354)
8 PRK10349 carboxylesterase BioH 100.0 4E-31 8.8E-36 240.3 24.7 248 26-319 3-254 (256)
9 PRK06489 hypothetical protein; 100.0 1.1E-30 2.3E-35 248.9 25.2 276 21-323 46-359 (360)
10 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.5E-30 3.2E-35 240.0 24.8 257 24-319 19-281 (282)
11 PLN02965 Probable pheophorbida 100.0 8.8E-31 1.9E-35 237.9 21.9 239 38-322 5-254 (255)
12 TIGR03056 bchO_mg_che_rel puta 100.0 4.5E-30 9.7E-35 235.9 25.3 268 18-319 9-278 (278)
13 PLN03087 BODYGUARD 1 domain co 100.0 1.5E-30 3.2E-35 251.2 22.6 270 20-321 181-479 (481)
14 PRK03204 haloalkane dehalogena 100.0 9.1E-31 2E-35 241.5 20.2 263 15-318 14-285 (286)
15 TIGR03611 RutD pyrimidine util 100.0 1.1E-29 2.4E-34 230.0 22.3 252 27-319 1-256 (257)
16 PLN03084 alpha/beta hydrolase 100.0 3E-29 6.5E-34 237.8 25.6 261 19-319 109-382 (383)
17 PLN02385 hydrolase; alpha/beta 100.0 2.8E-29 6.1E-34 238.3 24.9 266 17-322 64-346 (349)
18 PRK10673 acyl-CoA esterase; Pr 100.0 1.9E-29 4.1E-34 229.0 22.6 248 26-320 2-254 (255)
19 PRK08775 homoserine O-acetyltr 100.0 6.8E-30 1.5E-34 241.8 18.2 268 20-322 41-340 (343)
20 PRK07581 hypothetical protein; 100.0 4.7E-29 1E-33 236.0 22.4 273 20-322 21-337 (339)
21 KOG1454 Predicted hydrolase/ac 100.0 7E-29 1.5E-33 230.2 21.7 261 35-322 57-325 (326)
22 PRK10749 lysophospholipase L2; 100.0 3.8E-28 8.1E-33 228.6 26.1 274 17-321 33-329 (330)
23 TIGR02427 protocat_pcaD 3-oxoa 100.0 5.7E-29 1.2E-33 223.9 19.3 245 27-319 2-251 (251)
24 PHA02857 monoglyceride lipase; 100.0 2.6E-28 5.7E-33 224.3 24.0 257 19-321 5-273 (276)
25 TIGR01738 bioH putative pimelo 100.0 8.2E-29 1.8E-33 222.2 20.0 240 33-318 1-245 (245)
26 TIGR01392 homoserO_Ac_trn homo 100.0 2.6E-28 5.6E-33 231.8 22.7 273 20-319 11-351 (351)
27 PLN02211 methyl indole-3-aceta 100.0 7E-28 1.5E-32 220.4 23.4 257 23-321 5-270 (273)
28 PRK00175 metX homoserine O-ace 100.0 9E-28 1.9E-32 229.9 24.8 277 20-323 28-376 (379)
29 PLN02298 hydrolase, alpha/beta 100.0 3.6E-27 7.7E-32 222.3 27.3 265 18-322 36-318 (330)
30 PF12697 Abhydrolase_6: Alpha/ 100.0 3.8E-28 8.3E-33 214.9 18.8 226 39-313 1-228 (228)
31 PRK11126 2-succinyl-6-hydroxy- 100.0 7.7E-28 1.7E-32 216.7 20.8 234 35-320 1-241 (242)
32 TIGR01250 pro_imino_pep_2 prol 100.0 5.7E-27 1.2E-31 215.5 26.2 270 19-319 6-288 (288)
33 KOG4409 Predicted hydrolase/ac 100.0 2.9E-27 6.2E-32 211.0 22.0 273 23-321 74-364 (365)
34 TIGR03695 menH_SHCHC 2-succiny 99.9 1.2E-26 2.7E-31 208.2 19.6 241 37-319 2-251 (251)
35 PRK14875 acetoin dehydrogenase 99.9 5.2E-26 1.1E-30 218.0 23.6 255 18-320 112-370 (371)
36 TIGR01249 pro_imino_pep_1 prol 99.9 6.9E-26 1.5E-30 211.2 23.7 268 20-319 10-303 (306)
37 PLN02894 hydrolase, alpha/beta 99.9 1.7E-25 3.7E-30 215.1 23.7 270 26-324 93-388 (402)
38 PRK06765 homoserine O-acetyltr 99.9 4.7E-25 1E-29 209.6 24.5 282 21-320 37-387 (389)
39 PLN02980 2-oxoglutarate decarb 99.9 1.5E-25 3.3E-30 246.2 24.0 259 27-327 1360-1645(1655)
40 PRK05855 short chain dehydroge 99.9 3.2E-26 6.9E-31 232.4 17.3 273 18-323 6-294 (582)
41 PLN02652 hydrolase; alpha/beta 99.9 7.1E-25 1.5E-29 209.2 24.6 259 21-323 117-389 (395)
42 COG2267 PldB Lysophospholipase 99.9 6.3E-25 1.4E-29 201.8 22.6 273 14-322 9-295 (298)
43 KOG1455 Lysophospholipase [Lip 99.9 1.6E-24 3.6E-29 190.0 21.5 266 16-321 29-312 (313)
44 KOG2984 Predicted hydrolase [G 99.9 2.5E-25 5.3E-30 182.3 13.7 251 17-321 23-276 (277)
45 COG1647 Esterase/lipase [Gener 99.9 1.3E-23 2.8E-28 175.5 17.0 221 37-319 16-242 (243)
46 KOG2382 Predicted alpha/beta h 99.9 4.4E-23 9.5E-28 184.1 20.3 254 35-322 51-314 (315)
47 TIGR01607 PST-A Plasmodium sub 99.9 8.7E-23 1.9E-27 191.7 23.0 258 21-319 4-331 (332)
48 PLN02511 hydrolase 99.9 1.2E-23 2.7E-28 201.4 17.0 262 21-324 78-368 (388)
49 PRK05077 frsA fermentation/res 99.9 4.9E-21 1.1E-25 184.3 24.0 226 23-321 177-412 (414)
50 PF00561 Abhydrolase_1: alpha/ 99.9 1.9E-22 4.1E-27 179.5 11.4 219 86-315 1-229 (230)
51 TIGR03100 hydr1_PEP hydrolase, 99.9 1E-20 2.2E-25 173.2 21.5 245 20-319 7-273 (274)
52 PRK10985 putative hydrolase; P 99.9 1.9E-20 4.1E-25 175.8 21.9 244 36-321 58-320 (324)
53 TIGR01836 PHA_synth_III_C poly 99.9 5.1E-20 1.1E-24 174.8 21.3 271 20-320 43-349 (350)
54 PRK13604 luxD acyl transferase 99.9 4.9E-20 1.1E-24 166.6 19.3 217 22-304 17-247 (307)
55 PRK10566 esterase; Provisional 99.9 9.4E-20 2E-24 164.8 21.1 213 27-321 15-248 (249)
56 COG2021 MET2 Homoserine acetyl 99.9 1.2E-19 2.7E-24 164.2 21.5 280 21-320 32-367 (368)
57 PLN02872 triacylglycerol lipas 99.8 1.2E-19 2.6E-24 172.7 21.7 278 20-322 50-390 (395)
58 TIGR01838 PHA_synth_I poly(R)- 99.8 1.4E-19 2.9E-24 176.9 19.2 239 35-308 187-462 (532)
59 PRK11071 esterase YqiA; Provis 99.8 1.5E-19 3.3E-24 155.7 16.9 185 37-319 2-189 (190)
60 COG0596 MhpC Predicted hydrola 99.8 1.1E-18 2.5E-23 157.0 22.7 267 20-319 5-280 (282)
61 KOG2564 Predicted acetyltransf 99.8 4.5E-19 9.7E-24 153.0 11.8 262 20-322 53-328 (343)
62 PF12695 Abhydrolase_5: Alpha/ 99.8 1.2E-18 2.6E-23 143.8 14.1 144 38-301 1-145 (145)
63 KOG1552 Predicted alpha/beta h 99.8 2.3E-18 5.1E-23 148.5 15.0 190 36-324 60-255 (258)
64 PRK07868 acyl-CoA synthetase; 99.8 1.2E-17 2.6E-22 178.2 23.5 264 36-326 67-366 (994)
65 COG3208 GrsT Predicted thioest 99.8 1.8E-17 3.9E-22 142.2 15.9 223 36-321 7-236 (244)
66 KOG4391 Predicted alpha/beta h 99.7 5.9E-18 1.3E-22 140.7 10.0 215 21-324 61-285 (300)
67 PF03096 Ndr: Ndr family; Int 99.7 1.8E-16 3.8E-21 140.6 17.7 260 20-322 4-280 (283)
68 PRK11460 putative hydrolase; P 99.7 1.7E-16 3.6E-21 141.5 17.7 174 34-318 14-209 (232)
69 PF06342 DUF1057: Alpha/beta h 99.7 4.3E-15 9.4E-20 130.0 23.7 114 25-163 21-138 (297)
70 KOG2931 Differentiation-relate 99.7 1.4E-15 3.1E-20 132.6 18.5 266 20-323 27-308 (326)
71 TIGR03101 hydr2_PEP hydrolase, 99.7 2E-16 4.3E-21 142.4 13.2 103 36-162 25-134 (266)
72 PLN02442 S-formylglutathione h 99.7 7.9E-15 1.7E-19 134.7 20.7 117 23-161 28-177 (283)
73 COG0429 Predicted hydrolase of 99.7 9.1E-16 2E-20 137.0 13.7 246 35-322 74-341 (345)
74 KOG4667 Predicted esterase [Li 99.7 3.9E-15 8.6E-20 124.0 15.2 215 38-320 35-257 (269)
75 COG1506 DAP2 Dipeptidyl aminop 99.7 6.2E-15 1.3E-19 149.5 19.8 227 18-323 369-618 (620)
76 PF00326 Peptidase_S9: Prolyl 99.7 7.4E-15 1.6E-19 129.5 17.9 184 84-323 13-211 (213)
77 PLN00021 chlorophyllase 99.6 4.5E-15 9.7E-20 137.3 15.3 103 35-161 51-165 (313)
78 TIGR02821 fghA_ester_D S-formy 99.6 6.3E-14 1.4E-18 128.4 22.4 118 23-161 23-172 (275)
79 PF00975 Thioesterase: Thioest 99.6 3.3E-14 7.2E-19 126.8 17.2 219 38-318 2-229 (229)
80 TIGR01839 PHA_synth_II poly(R) 99.6 4.2E-14 9.2E-19 137.0 18.8 249 10-303 185-483 (560)
81 KOG1838 Alpha/beta hydrolase [ 99.6 6.5E-14 1.4E-18 129.8 17.6 251 35-323 124-390 (409)
82 PF02230 Abhydrolase_2: Phosph 99.6 7.4E-14 1.6E-18 123.3 16.2 179 33-321 11-215 (216)
83 TIGR03230 lipo_lipase lipoprot 99.6 2.1E-14 4.6E-19 136.8 13.5 113 32-166 37-158 (442)
84 COG0400 Predicted esterase [Ge 99.6 8.8E-14 1.9E-18 119.8 14.1 172 35-320 17-204 (207)
85 TIGR00976 /NonD putative hydro 99.5 4.4E-13 9.6E-18 134.6 19.3 117 22-163 4-133 (550)
86 cd00707 Pancreat_lipase_like P 99.5 3.1E-14 6.6E-19 129.9 9.9 119 23-164 23-149 (275)
87 PF06500 DUF1100: Alpha/beta h 99.5 3.1E-13 6.8E-18 126.3 15.8 209 37-320 191-408 (411)
88 TIGR01840 esterase_phb esteras 99.5 5.8E-13 1.2E-17 117.3 15.4 105 35-161 12-129 (212)
89 PF05448 AXE1: Acetyl xylan es 99.5 3.7E-12 8E-17 118.1 21.0 206 37-320 84-319 (320)
90 TIGR01849 PHB_depoly_PhaZ poly 99.5 2.1E-12 4.5E-17 121.9 19.2 253 37-320 103-405 (406)
91 PF01738 DLH: Dienelactone hyd 99.5 5E-13 1.1E-17 118.3 13.7 176 36-320 14-216 (218)
92 PF06821 Ser_hydrolase: Serine 99.5 2E-12 4.4E-17 108.8 15.8 155 39-306 1-158 (171)
93 PF10230 DUF2305: Uncharacteri 99.5 3.2E-12 7E-17 115.9 18.0 111 36-165 2-125 (266)
94 TIGR03502 lipase_Pla1_cef extr 99.5 1.4E-12 3.1E-17 131.7 16.6 126 15-162 418-601 (792)
95 PRK10162 acetyl esterase; Prov 99.4 9.8E-12 2.1E-16 116.2 19.5 105 35-162 80-195 (318)
96 KOG2565 Predicted hydrolases o 99.4 1.3E-11 2.9E-16 111.1 18.0 128 20-161 129-263 (469)
97 COG2945 Predicted hydrolase of 99.4 1.6E-11 3.6E-16 101.1 14.7 176 27-319 18-205 (210)
98 COG3458 Acetyl esterase (deace 99.4 1.9E-11 4.1E-16 105.9 15.5 208 37-321 84-317 (321)
99 COG0412 Dienelactone hydrolase 99.4 4.4E-11 9.6E-16 106.3 18.4 176 37-322 28-234 (236)
100 COG4757 Predicted alpha/beta h 99.3 3.4E-11 7.5E-16 101.9 12.4 254 18-318 9-280 (281)
101 KOG2624 Triglyceride lipase-ch 99.3 1.3E-10 2.8E-15 109.6 17.7 279 20-322 54-399 (403)
102 COG3243 PhaC Poly(3-hydroxyalk 99.3 4.5E-11 9.9E-16 110.3 13.8 255 36-323 107-401 (445)
103 PF05728 UPF0227: Uncharacteri 99.3 2.9E-10 6.2E-15 96.8 17.7 89 38-162 1-91 (187)
104 KOG3043 Predicted hydrolase re 99.3 4.6E-11 9.9E-16 100.9 12.3 209 1-321 4-240 (242)
105 PF12146 Hydrolase_4: Putative 99.3 9.3E-12 2E-16 90.3 6.7 76 24-122 1-79 (79)
106 PF08538 DUF1749: Protein of u 99.3 4.3E-10 9.4E-15 101.2 18.5 243 25-319 21-303 (303)
107 PRK10252 entF enterobactin syn 99.3 7E-11 1.5E-15 131.1 16.2 102 33-162 1066-1171(1296)
108 PRK05371 x-prolyl-dipeptidyl a 99.2 4.1E-10 8.8E-15 116.1 18.9 221 79-322 273-520 (767)
109 PRK10115 protease 2; Provision 99.2 5.8E-10 1.3E-14 114.2 19.5 209 20-303 422-655 (686)
110 PF02273 Acyl_transf_2: Acyl t 99.2 3.4E-09 7.4E-14 90.7 20.3 216 23-307 11-242 (294)
111 PTZ00472 serine carboxypeptida 99.2 3.1E-09 6.8E-14 103.7 21.3 134 24-162 60-216 (462)
112 COG3319 Thioesterase domains o 99.2 1.9E-09 4.2E-14 95.8 17.6 100 37-163 1-104 (257)
113 PF02129 Peptidase_S15: X-Pro 99.2 1.2E-09 2.5E-14 100.1 16.4 80 84-166 56-140 (272)
114 COG3545 Predicted esterase of 99.2 1.3E-09 2.7E-14 89.0 14.3 136 107-321 40-179 (181)
115 COG3571 Predicted hydrolase of 99.2 1.6E-09 3.5E-14 86.5 14.1 183 33-320 11-210 (213)
116 PF03959 FSH1: Serine hydrolas 99.1 2.2E-10 4.8E-15 100.6 8.4 169 35-306 3-206 (212)
117 PF09752 DUF2048: Uncharacteri 99.1 5.5E-09 1.2E-13 95.5 16.6 235 35-319 91-347 (348)
118 PF06028 DUF915: Alpha/beta hy 99.1 9E-09 2E-13 91.9 17.5 207 36-319 11-253 (255)
119 PF06057 VirJ: Bacterial virul 99.1 2.7E-09 5.8E-14 89.2 13.1 95 38-161 4-106 (192)
120 KOG2100 Dipeptidyl aminopeptid 99.1 1.3E-08 2.8E-13 104.8 20.3 220 18-323 501-749 (755)
121 PF12740 Chlorophyllase2: Chlo 99.0 2.1E-09 4.6E-14 95.0 11.6 102 36-161 17-130 (259)
122 PF07859 Abhydrolase_3: alpha/ 99.0 1.1E-08 2.5E-13 89.8 14.1 93 39-161 1-109 (211)
123 KOG2551 Phospholipase/carboxyh 99.0 1.3E-08 2.7E-13 86.3 13.2 62 258-322 160-221 (230)
124 PF10503 Esterase_phd: Esteras 99.0 2.7E-08 5.9E-13 86.8 15.3 106 36-162 16-132 (220)
125 KOG3975 Uncharacterized conser 99.0 2.2E-08 4.9E-13 85.9 14.1 256 34-318 27-300 (301)
126 PF07819 PGAP1: PGAP1-like pro 99.0 1.2E-08 2.6E-13 90.1 12.9 109 36-163 4-124 (225)
127 smart00824 PKS_TE Thioesterase 98.9 1.6E-08 3.4E-13 88.4 13.3 95 41-162 2-102 (212)
128 PRK04940 hypothetical protein; 98.9 3.7E-07 8.1E-12 76.3 18.7 53 263-320 126-179 (180)
129 KOG4627 Kynurenine formamidase 98.9 6.1E-08 1.3E-12 80.8 12.8 150 84-306 96-252 (270)
130 PF03403 PAF-AH_p_II: Platelet 98.8 1.9E-08 4.1E-13 95.7 10.5 102 37-161 101-261 (379)
131 COG0657 Aes Esterase/lipase [L 98.8 5E-07 1.1E-11 84.5 19.9 100 36-161 79-190 (312)
132 PLN02733 phosphatidylcholine-s 98.8 1.3E-08 2.7E-13 98.1 8.8 96 47-165 105-204 (440)
133 PF03583 LIP: Secretory lipase 98.8 5.4E-08 1.2E-12 89.5 11.5 60 260-319 218-283 (290)
134 KOG2112 Lysophospholipase [Lip 98.8 2.3E-07 4.9E-12 78.3 13.6 173 37-314 4-201 (206)
135 COG4099 Predicted peptidase [G 98.8 8.9E-08 1.9E-12 84.3 11.3 122 23-162 170-304 (387)
136 PF12715 Abhydrolase_7: Abhydr 98.8 7.2E-08 1.6E-12 89.1 11.1 83 78-161 153-259 (390)
137 PF07224 Chlorophyllase: Chlor 98.7 5.2E-08 1.1E-12 84.5 9.1 101 37-162 47-157 (307)
138 PF08840 BAAT_C: BAAT / Acyl-C 98.7 7.7E-08 1.7E-12 84.4 9.4 50 113-163 5-57 (213)
139 KOG1515 Arylacetamide deacetyl 98.7 2.1E-06 4.5E-11 79.7 19.0 104 36-165 90-210 (336)
140 PF05677 DUF818: Chlamydia CHL 98.7 1.4E-06 3.1E-11 79.0 17.0 103 20-148 117-236 (365)
141 PF00151 Lipase: Lipase; Inte 98.6 3.8E-08 8.3E-13 91.7 6.0 111 35-166 70-191 (331)
142 PLN02606 palmitoyl-protein thi 98.6 3.4E-06 7.3E-11 76.1 17.6 108 36-170 26-140 (306)
143 KOG2281 Dipeptidyl aminopeptid 98.6 4.4E-07 9.6E-12 87.7 12.3 178 84-320 675-866 (867)
144 COG4188 Predicted dienelactone 98.6 3.5E-08 7.6E-13 90.5 3.8 92 37-150 72-182 (365)
145 PF11339 DUF3141: Protein of u 98.6 6.5E-06 1.4E-10 78.5 18.5 70 85-161 100-174 (581)
146 PF01674 Lipase_2: Lipase (cla 98.6 1.4E-07 2.9E-12 82.3 6.6 88 38-148 3-96 (219)
147 PF04301 DUF452: Protein of un 98.6 3.5E-06 7.5E-11 72.7 14.9 94 35-176 10-104 (213)
148 KOG1553 Predicted alpha/beta h 98.5 3.4E-07 7.4E-12 82.2 8.9 74 85-161 268-344 (517)
149 PF00450 Peptidase_S10: Serine 98.5 9.4E-06 2E-10 79.1 18.2 135 23-162 22-181 (415)
150 KOG3253 Predicted alpha/beta h 98.4 2E-06 4.3E-11 82.8 10.5 149 85-322 208-375 (784)
151 COG3509 LpqC Poly(3-hydroxybut 98.4 7.2E-06 1.6E-10 72.9 12.9 126 16-162 36-179 (312)
152 PLN02633 palmitoyl protein thi 98.4 4.9E-05 1.1E-09 68.7 18.3 108 37-171 26-140 (314)
153 PF05990 DUF900: Alpha/beta hy 98.3 2.9E-06 6.3E-11 75.4 9.5 107 35-161 17-136 (233)
154 KOG1551 Uncharacterized conser 98.3 3E-05 6.6E-10 67.5 13.9 208 83-323 139-368 (371)
155 PF12048 DUF3530: Protein of u 98.2 0.00013 2.8E-09 67.7 18.4 39 123-161 189-228 (310)
156 COG4814 Uncharacterized protei 98.2 7.2E-05 1.6E-09 65.0 14.6 107 38-161 47-175 (288)
157 PF05057 DUF676: Putative seri 98.2 1.4E-05 3.1E-10 70.3 10.7 107 37-166 5-129 (217)
158 PRK10439 enterobactin/ferric e 98.2 8.9E-05 1.9E-09 71.6 17.0 51 111-161 267-322 (411)
159 COG1075 LipA Predicted acetylt 98.2 5.8E-06 1.2E-10 77.7 8.4 103 38-166 61-168 (336)
160 KOG3847 Phospholipase A2 (plat 98.1 1.9E-05 4.1E-10 70.4 9.4 40 37-98 119-158 (399)
161 COG2936 Predicted acyl esteras 98.1 8.3E-05 1.8E-09 72.8 14.6 131 19-166 24-163 (563)
162 KOG4840 Predicted hydrolases o 98.0 0.00032 6.9E-09 59.7 14.1 99 37-162 37-144 (299)
163 PLN02209 serine carboxypeptida 98.0 0.0016 3.5E-08 63.2 21.0 59 261-320 351-434 (437)
164 PF08386 Abhydrolase_4: TAP-li 97.9 2.8E-05 6.1E-10 59.6 6.3 60 261-321 34-94 (103)
165 PF05705 DUF829: Eukaryotic pr 97.9 0.00042 9E-09 62.1 14.7 60 259-318 176-240 (240)
166 COG1073 Hydrolases of the alph 97.9 0.00022 4.8E-09 65.5 12.8 67 255-321 225-297 (299)
167 PLN03016 sinapoylglucose-malat 97.8 0.002 4.4E-08 62.6 18.5 59 261-320 347-430 (433)
168 COG4782 Uncharacterized protei 97.8 0.00018 4E-09 66.0 10.3 107 35-161 115-233 (377)
169 KOG2541 Palmitoyl protein thio 97.8 0.00045 9.7E-09 60.7 12.1 107 37-171 24-137 (296)
170 COG4553 DepA Poly-beta-hydroxy 97.8 0.00035 7.5E-09 61.9 11.5 101 36-162 103-209 (415)
171 KOG3101 Esterase D [General fu 97.8 0.00013 2.8E-09 61.6 8.3 107 36-163 44-177 (283)
172 KOG3724 Negative regulator of 97.7 0.00013 2.9E-09 72.7 9.1 129 22-161 65-219 (973)
173 COG3946 VirJ Type IV secretory 97.7 0.0008 1.7E-08 62.5 12.4 85 37-150 261-349 (456)
174 PLN02213 sinapoylglucose-malat 97.6 0.0088 1.9E-07 55.9 19.4 59 261-320 233-316 (319)
175 PF10340 DUF2424: Protein of u 97.6 0.0029 6.2E-08 59.4 15.8 110 35-162 121-235 (374)
176 PF00756 Esterase: Putative es 97.6 8.4E-05 1.8E-09 67.0 5.6 49 113-161 98-149 (251)
177 KOG1282 Serine carboxypeptidas 97.6 0.01 2.2E-07 57.5 19.2 134 18-162 47-213 (454)
178 PF05577 Peptidase_S28: Serine 97.6 0.00052 1.1E-08 67.3 10.7 119 24-164 13-150 (434)
179 PF11144 DUF2920: Protein of u 97.6 0.0045 9.8E-08 58.3 16.1 63 261-323 293-370 (403)
180 PF10142 PhoPQ_related: PhoPQ- 97.6 0.002 4.3E-08 60.7 13.6 70 253-325 254-324 (367)
181 PF02089 Palm_thioest: Palmito 97.5 0.00014 3E-09 65.2 5.6 110 37-171 6-125 (279)
182 cd00312 Esterase_lipase Estera 97.5 0.00092 2E-08 66.7 11.8 78 85-162 125-213 (493)
183 PF02450 LCAT: Lecithin:choles 97.5 0.00069 1.5E-08 65.1 10.3 119 20-165 35-163 (389)
184 COG3150 Predicted esterase [Ge 97.4 0.00035 7.7E-09 56.8 5.7 88 39-162 2-91 (191)
185 COG2830 Uncharacterized protei 97.1 0.0082 1.8E-07 48.6 10.4 92 37-176 12-104 (214)
186 COG1505 Serine proteases of th 97.1 0.0052 1.1E-07 60.1 11.0 117 20-160 400-533 (648)
187 COG0627 Predicted esterase [Ge 97.0 0.0029 6.2E-08 58.6 8.3 55 108-162 127-187 (316)
188 KOG2183 Prolylcarboxypeptidase 97.0 0.0083 1.8E-07 56.1 10.8 116 26-162 66-202 (492)
189 cd00741 Lipase Lipase. Lipase 96.9 0.0028 6E-08 52.4 6.9 52 111-162 8-67 (153)
190 COG2382 Fes Enterochelin ester 96.8 0.019 4.2E-07 51.8 11.0 34 128-161 178-211 (299)
191 PF00135 COesterase: Carboxyle 96.6 0.011 2.4E-07 59.6 9.8 79 84-162 155-245 (535)
192 PF07082 DUF1350: Protein of u 96.6 0.28 6.1E-06 43.3 17.0 77 51-160 35-123 (250)
193 KOG3967 Uncharacterized conser 96.6 0.015 3.2E-07 49.5 8.6 78 84-161 143-226 (297)
194 COG1770 PtrB Protease II [Amin 96.6 0.18 3.9E-06 50.4 17.2 78 84-161 476-561 (682)
195 PF01764 Lipase_3: Lipase (cla 96.5 0.0068 1.5E-07 49.1 6.1 37 112-148 49-85 (140)
196 COG2272 PnbA Carboxylesterase 96.4 0.021 4.5E-07 55.0 9.2 105 35-162 93-217 (491)
197 PLN02517 phosphatidylcholine-s 96.3 0.0074 1.6E-07 59.5 6.1 54 111-164 193-265 (642)
198 PF06259 Abhydrolase_8: Alpha/ 96.1 0.039 8.5E-07 46.5 8.6 55 110-164 87-146 (177)
199 KOG2182 Hydrolytic enzymes of 95.9 0.043 9.4E-07 52.8 8.5 78 85-162 118-207 (514)
200 KOG2369 Lecithin:cholesterol a 95.9 0.011 2.3E-07 56.5 4.5 71 88-161 146-224 (473)
201 KOG1202 Animal-type fatty acid 95.8 0.38 8.2E-06 51.3 15.5 94 35-162 2122-2219(2376)
202 PF11187 DUF2974: Protein of u 95.8 0.026 5.6E-07 49.7 6.5 45 117-162 75-123 (224)
203 COG2939 Carboxypeptidase C (ca 95.8 0.071 1.5E-06 51.6 9.6 131 27-161 88-235 (498)
204 cd00519 Lipase_3 Lipase (class 95.4 0.035 7.6E-07 49.2 6.0 24 125-148 126-149 (229)
205 KOG2237 Predicted serine prote 95.1 0.22 4.8E-06 49.5 10.6 78 84-161 498-583 (712)
206 COG2819 Predicted hydrolase of 95.1 0.045 9.7E-07 48.8 5.4 47 115-161 122-171 (264)
207 PLN02162 triacylglycerol lipas 94.9 0.074 1.6E-06 51.2 6.8 51 111-161 262-320 (475)
208 PF06441 EHN: Epoxide hydrolas 94.9 0.041 8.9E-07 42.6 4.1 38 18-55 71-111 (112)
209 PLN00413 triacylglycerol lipas 94.8 0.084 1.8E-06 51.0 7.0 51 111-161 268-326 (479)
210 PF01083 Cutinase: Cutinase; 94.6 0.081 1.7E-06 45.0 5.8 73 85-161 39-121 (179)
211 PLN02571 triacylglycerol lipas 94.3 0.072 1.6E-06 50.9 5.1 37 111-147 208-246 (413)
212 PF05576 Peptidase_S37: PS-10 94.3 0.075 1.6E-06 50.1 5.1 105 33-161 60-168 (448)
213 PLN02454 triacylglycerol lipas 94.2 0.086 1.9E-06 50.3 5.4 32 116-147 215-248 (414)
214 PF11288 DUF3089: Protein of u 93.7 0.15 3.3E-06 44.0 5.6 39 110-148 77-116 (207)
215 KOG1516 Carboxylesterase and r 93.7 0.36 7.9E-06 48.8 9.3 77 85-161 144-231 (545)
216 PLN02408 phospholipase A1 93.2 0.14 3.1E-06 48.1 5.0 35 113-147 184-220 (365)
217 KOG4372 Predicted alpha/beta h 93.0 0.07 1.5E-06 50.2 2.6 87 36-145 80-168 (405)
218 PLN02310 triacylglycerol lipas 92.8 0.3 6.5E-06 46.6 6.6 36 112-147 190-229 (405)
219 PLN02934 triacylglycerol lipas 92.7 0.19 4E-06 49.1 5.1 36 111-146 305-340 (515)
220 COG4947 Uncharacterized protei 92.5 0.25 5.4E-06 40.7 4.8 116 24-161 14-135 (227)
221 PLN02324 triacylglycerol lipas 92.1 0.25 5.3E-06 47.2 5.1 35 113-147 199-235 (415)
222 PF04083 Abhydro_lipase: Parti 91.9 0.24 5.3E-06 33.9 3.5 35 19-53 17-60 (63)
223 PLN02802 triacylglycerol lipas 91.5 0.31 6.7E-06 47.6 5.0 35 113-147 314-350 (509)
224 PLN03037 lipase class 3 family 91.3 0.33 7.2E-06 47.5 5.0 36 112-147 299-338 (525)
225 PF05277 DUF726: Protein of un 91.2 0.55 1.2E-05 44.1 6.2 37 125-161 218-259 (345)
226 PLN02753 triacylglycerol lipas 91.1 0.35 7.6E-06 47.4 5.0 35 113-147 293-332 (531)
227 PLN02719 triacylglycerol lipas 90.8 0.39 8.5E-06 47.0 5.0 35 113-147 279-318 (518)
228 PLN02761 lipase class 3 family 90.7 0.4 8.6E-06 47.0 5.0 35 112-146 273-313 (527)
229 PF08237 PE-PPE: PE-PPE domain 89.9 1.6 3.5E-05 38.4 7.8 77 85-161 2-88 (225)
230 KOG4569 Predicted lipase [Lipi 89.7 0.54 1.2E-05 44.3 4.9 37 111-147 155-191 (336)
231 PLN02847 triacylglycerol lipas 88.6 0.79 1.7E-05 45.7 5.3 21 127-147 251-271 (633)
232 PF07519 Tannase: Tannase and 88.6 2.6 5.6E-05 41.8 9.0 77 85-162 59-150 (474)
233 KOG2521 Uncharacterized conser 86.9 28 0.0006 32.9 16.0 65 261-325 225-294 (350)
234 COG4287 PqaA PhoPQ-activated p 86.7 3.2 6.9E-05 38.8 7.6 63 258-323 326-389 (507)
235 PF06850 PHB_depo_C: PHB de-po 84.5 2.6 5.5E-05 35.9 5.5 60 261-320 134-201 (202)
236 KOG2029 Uncharacterized conser 80.7 2.2 4.8E-05 42.4 4.2 37 126-162 525-572 (697)
237 KOG1283 Serine carboxypeptidas 77.8 3.6 7.8E-05 37.8 4.4 76 85-161 71-165 (414)
238 COG5153 CVT17 Putative lipase 76.0 4 8.7E-05 36.7 4.1 28 122-149 271-298 (425)
239 KOG4540 Putative lipase essent 76.0 4 8.7E-05 36.7 4.1 28 122-149 271-298 (425)
240 PF07519 Tannase: Tannase and 74.4 6.2 0.00013 39.1 5.5 71 252-322 344-428 (474)
241 PRK12467 peptide synthase; Pro 68.4 18 0.0004 45.9 8.8 100 35-161 3691-3794(3956)
242 TIGR03712 acc_sec_asp2 accesso 68.2 1.3E+02 0.0028 29.8 18.9 104 27-159 279-387 (511)
243 KOG4388 Hormone-sensitive lipa 58.5 12 0.00026 37.3 3.8 72 85-161 427-507 (880)
244 COG2939 Carboxypeptidase C (ca 57.9 11 0.00023 37.1 3.3 60 262-321 426-491 (498)
245 smart00827 PKS_AT Acyl transfe 55.5 14 0.0003 33.9 3.7 29 118-146 73-101 (298)
246 PF00698 Acyl_transf_1: Acyl t 55.3 8.4 0.00018 35.9 2.2 31 117-147 74-104 (318)
247 TIGR03131 malonate_mdcH malona 52.9 17 0.00036 33.5 3.8 31 117-147 66-96 (295)
248 TIGR03493 cellullose_BcsF cell 52.1 29 0.00063 23.3 3.6 35 361-395 6-50 (62)
249 PRK10279 hypothetical protein; 52.0 19 0.00041 33.3 3.9 32 117-148 23-54 (300)
250 cd01714 ETF_beta The electron 51.3 43 0.00094 28.9 5.9 64 85-158 76-145 (202)
251 cd07198 Patatin Patatin-like p 51.2 23 0.00049 29.6 4.0 33 117-149 16-48 (172)
252 cd07225 Pat_PNPLA6_PNPLA7 Pata 50.8 21 0.00046 33.1 4.1 33 116-148 32-64 (306)
253 TIGR00128 fabD malonyl CoA-acy 48.8 19 0.00042 32.8 3.5 29 119-147 74-103 (290)
254 KOG2385 Uncharacterized conser 47.8 41 0.00088 33.3 5.4 38 124-161 444-486 (633)
255 cd07207 Pat_ExoU_VipD_like Exo 47.4 27 0.00059 29.6 4.0 31 118-148 18-48 (194)
256 COG1752 RssA Predicted esteras 46.2 26 0.00056 32.5 3.9 33 116-148 28-60 (306)
257 cd07227 Pat_Fungal_NTE1 Fungal 45.5 29 0.00062 31.6 4.0 32 117-148 28-59 (269)
258 cd07210 Pat_hypo_W_succinogene 44.6 35 0.00076 29.9 4.3 30 119-148 20-49 (221)
259 PF09656 PGPGW: Putative trans 43.0 38 0.00082 22.2 3.1 23 369-391 27-51 (53)
260 PF03283 PAE: Pectinacetyleste 42.9 1.2E+02 0.0026 29.0 7.8 35 126-160 155-193 (361)
261 COG1576 Uncharacterized conser 40.9 86 0.0019 25.7 5.5 49 85-144 67-115 (155)
262 PF12273 RCR: Chitin synthesis 40.5 43 0.00092 26.6 3.8 12 383-394 24-35 (130)
263 PF09949 DUF2183: Uncharacteri 39.7 1.6E+02 0.0035 22.1 6.8 72 85-157 24-97 (100)
264 PF09994 DUF2235: Uncharacteri 38.9 2.8E+02 0.0061 25.2 9.4 40 109-148 72-113 (277)
265 cd07209 Pat_hypo_Ecoli_Z1214_l 38.1 44 0.00096 29.1 3.9 33 117-149 16-48 (215)
266 cd07228 Pat_NTE_like_bacteria 38.1 47 0.001 27.8 3.9 31 119-149 20-50 (175)
267 TIGR02816 pfaB_fam PfaB family 37.3 36 0.00078 34.3 3.5 31 118-148 255-286 (538)
268 COG3933 Transcriptional antite 34.5 1.5E+02 0.0032 29.0 6.8 73 38-145 111-183 (470)
269 PF11120 DUF2636: Protein of u 34.4 70 0.0015 21.7 3.4 30 360-389 5-34 (62)
270 PRK02399 hypothetical protein; 33.6 4.4E+02 0.0095 25.6 9.9 99 39-159 5-129 (406)
271 PF10605 3HBOH: 3HB-oligomer h 33.3 35 0.00075 34.5 2.6 34 129-162 287-321 (690)
272 KOG1252 Cystathionine beta-syn 32.4 4.3E+02 0.0094 24.9 9.7 56 17-95 186-249 (362)
273 cd07230 Pat_TGL4-5_like Triacy 31.8 31 0.00067 33.7 2.1 34 119-152 93-126 (421)
274 cd07205 Pat_PNPLA6_PNPLA7_NTE1 31.8 79 0.0017 26.3 4.4 30 119-148 20-49 (175)
275 PF02590 SPOUT_MTase: Predicte 29.8 1E+02 0.0022 25.4 4.5 44 85-138 67-110 (155)
276 cd07208 Pat_hypo_Ecoli_yjju_li 29.8 74 0.0016 28.7 4.1 33 119-151 18-51 (266)
277 PF06792 UPF0261: Uncharacteri 29.7 5.3E+02 0.011 25.0 9.9 99 39-159 3-127 (403)
278 PF00976 ACTH_domain: Corticot 29.7 8.1 0.00018 22.9 -1.4 22 379-400 6-27 (39)
279 COG3887 Predicted signaling pr 29.4 2.4E+02 0.0051 28.8 7.5 106 38-161 260-377 (655)
280 cd07229 Pat_TGL3_like Triacylg 28.7 56 0.0012 31.4 3.2 38 118-155 102-139 (391)
281 PF10081 Abhydrolase_9: Alpha/ 28.5 78 0.0017 28.9 3.8 36 127-162 109-147 (289)
282 cd07232 Pat_PLPL Patain-like p 28.4 33 0.00071 33.3 1.6 36 120-155 88-123 (407)
283 PF06309 Torsin: Torsin; Inte 28.2 42 0.00092 26.5 1.9 29 33-61 49-79 (127)
284 cd07212 Pat_PNPLA9 Patatin-lik 27.8 98 0.0021 28.8 4.6 18 130-147 35-52 (312)
285 cd07231 Pat_SDP1-like Sugar-De 27.3 42 0.00091 31.2 2.0 34 119-152 88-121 (323)
286 PRK00103 rRNA large subunit me 26.2 1.9E+02 0.0042 23.8 5.5 46 85-140 67-112 (157)
287 COG0218 Predicted GTPase [Gene 26.2 91 0.002 26.8 3.7 60 257-320 131-198 (200)
288 PF03610 EIIA-man: PTS system 25.9 2.6E+02 0.0055 21.4 6.0 73 38-144 2-75 (116)
289 cd07224 Pat_like Patatin-like 25.5 1E+02 0.0022 27.3 4.1 31 119-149 19-51 (233)
290 KOG4172 Predicted E3 ubiquitin 24.5 96 0.0021 20.4 2.6 24 368-391 20-43 (62)
291 COG1448 TyrB Aspartate/tyrosin 24.3 6.5E+02 0.014 24.2 11.3 85 38-161 173-264 (396)
292 TIGR02240 PHA_depoly_arom poly 24.2 3.7E+02 0.0081 23.9 7.8 58 262-322 26-89 (276)
293 PF14253 AbiH: Bacteriophage a 23.8 75 0.0016 28.6 3.0 15 125-139 233-247 (270)
294 PF07589 VPEP: PEP-CTERM motif 23.4 97 0.0021 16.7 2.2 13 368-380 8-20 (25)
295 TIGR03141 cytochro_ccmD heme e 23.1 1.4E+02 0.0031 18.6 3.2 30 362-391 9-38 (45)
296 cd07204 Pat_PNPLA_like Patatin 22.0 1.4E+02 0.003 26.7 4.2 20 130-149 34-53 (243)
297 PF11713 Peptidase_C80: Peptid 21.9 46 0.00099 27.5 1.1 47 93-139 61-116 (157)
298 PF12242 Eno-Rase_NADH_b: NAD( 21.2 1.3E+02 0.0029 21.4 3.1 25 124-148 37-61 (78)
299 COG0529 CysC Adenylylsulfate k 21.0 4.2E+02 0.0092 22.6 6.5 35 36-92 22-58 (197)
300 PF06289 FlbD: Flagellar prote 20.8 2E+02 0.0044 19.4 3.8 34 288-321 25-58 (60)
301 PF15161 Neuropep_like: Neurop 20.7 71 0.0015 21.0 1.5 16 378-393 20-35 (65)
302 cd07206 Pat_TGL3-4-5_SDP1 Tria 20.7 1.1E+02 0.0025 28.1 3.5 29 124-152 94-122 (298)
303 PF04995 CcmD: Heme exporter p 20.7 1.7E+02 0.0037 18.3 3.3 28 364-391 10-37 (46)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.6e-34 Score=266.68 Aligned_cols=275 Identities=20% Similarity=0.225 Sum_probs=182.4
Q ss_pred CCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..++++++|.+++|...|++.|+|||+||+++++..|..+++.|.+ .|+|+++|+||
T Consensus 9 ~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~DlpG 65 (294)
T PLN02824 9 ETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAK-----------------------SHRVYAIDLLG 65 (294)
T ss_pred CCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHh-----------------------CCeEEEEcCCC
Confidence 3667899999999999996446899999999999999999999987 68999999999
Q ss_pred CCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC--C
Q 015550 96 MGRSSVPVK-----KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--C 168 (405)
Q Consensus 96 ~G~S~~~~~-----~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~ 168 (405)
||.|+.+.. ...++++++++|+.+++++++.++++++||||||++++.+|.++|++|+++|++++...+... .
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~ 145 (294)
T PLN02824 66 YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQ 145 (294)
T ss_pred CCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCccccccccc
Confidence 999986542 136899999999999999999999999999999999999999999999999999986432211 1
Q ss_pred ccchhHHHHHHHHHhhccChhhhh-ccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRA-AVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
+.............+......... ............+...+... .........+. ....... ..........
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~ 219 (294)
T PLN02824 146 PWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAIL----RPGLEPG--AVDVFLDFIS 219 (294)
T ss_pred chhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHH----hccCCch--HHHHHHHHhc
Confidence 111111111111111100000000 00000000001111111111 11111111111 1111100 0001111111
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
........+.+.++++|+|+|+|++|.++|.+.++.+.+.. ++++++++++ ||++++|+|+++++.|.+|+++
T Consensus 220 ~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 220 YSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFD-AVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred cccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcC-CccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 11111223457788999999999999999999999877754 7789999997 9999999999999999999975
No 2
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=7.5e-34 Score=252.60 Aligned_cols=276 Identities=28% Similarity=0.357 Sum_probs=188.5
Q ss_pred CCcccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 16 PDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.-++++.+|++++|.+.|+ +.|.|+++||++.+..+|+.++..|+. +||+|+|+|+|
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~----------------------~~~rviA~Dlr 80 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLAS----------------------RGYRVIAPDLR 80 (322)
T ss_pred ceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhh----------------------cceEEEecCCC
Confidence 4466889999999999997 567899999999999999999999998 48999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|+|.|+.|.....|++..++.|+..++++++.++++++||+||+++|+.+|..+|++|+++|+++.+.. .|.....
T Consensus 81 GyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~----~p~~~~~ 156 (322)
T KOG4178|consen 81 GYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP----NPKLKPL 156 (322)
T ss_pred CCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC----Ccccchh
Confidence 999999999888999999999999999999999999999999999999999999999999999998864 1222211
Q ss_pred HHHHHHHHhhccChhhhhccCccc----ccCHhHHHhhhCC----------------CchhHHHHHHHHhhhhhccccCc
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDT----HYSQEYLEEYVGS----------------STRRAILYQEYVKGISATGMQSN 234 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
........................ ...+.....+... .....+..+.+...+...+....
T Consensus 157 ~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gp 236 (322)
T KOG4178|consen 157 DSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGP 236 (322)
T ss_pred hhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccccccc
Confidence 111111100000000000000000 0011111110000 00112222333333333332223
Q ss_pred ccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCe-EEEEcCC-CccccccCHHHHHH
Q 015550 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVA-RMIDLPG-GHLVSHERTEEVNQ 312 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~-~l~~~~g-gH~~~~e~p~~v~~ 312 (405)
+.+.+.+...|. ...-.+.++++||++|+|+.|.+.+........++..+.. +.++++| ||+++.|+|++|++
T Consensus 237 lNyyrn~~r~w~-----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~ 311 (322)
T KOG4178|consen 237 LNYYRNFRRNWE-----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQ 311 (322)
T ss_pred chhhHHHhhCch-----hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHH
Confidence 333333322221 1123456789999999999999998774444554444554 6777787 99999999999999
Q ss_pred HHHHHHHhhc
Q 015550 313 ALIDLIKASE 322 (405)
Q Consensus 313 ~i~~fl~~~~ 322 (405)
.|.+|+++..
T Consensus 312 ~i~~f~~~~~ 321 (322)
T KOG4178|consen 312 AILGFINSFS 321 (322)
T ss_pred HHHHHHHhhc
Confidence 9999998753
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=5.5e-33 Score=255.37 Aligned_cols=263 Identities=22% Similarity=0.310 Sum_probs=180.1
Q ss_pred ccccCCEEEEEEEc--cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 19 ALNDNGIKIFYRTY--GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 19 ~~~~~g~~i~y~~~--G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
++.++|.+++|... |+++++|||+||++++...|.++++.|.+ +|+|+++|+|||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~ 62 (276)
T TIGR02240 6 TIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-----------------------DLEVIAFDVPGV 62 (276)
T ss_pred EeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-----------------------CceEEEECCCCC
Confidence 46779999999775 34556799999999999999999999987 899999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
|.|+.+. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|+++++..... .+..... .
T Consensus 63 G~S~~~~--~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~-~ 138 (276)
T TIGR02240 63 GGSSTPR--HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVM-VPGKPKV-L 138 (276)
T ss_pred CCCCCCC--CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCcccc-CCCchhH-H
Confidence 9998654 3689999999999999999999999999999999999999999999999999998753210 0111000 0
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
.. ... ................+....... .......+........ ...+.... . ........+.
T Consensus 139 ---~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~---~-~~~~~~~~~~ 202 (276)
T TIGR02240 139 ---MM-MAS--PRRYIQPSHGIHIAPDIYGGAFRR---DPELAMAHASKVRSGG---KLGYYWQL---F-AGLGWTSIHW 202 (276)
T ss_pred ---HH-hcC--chhhhccccccchhhhhccceeec---cchhhhhhhhhcccCC---CchHHHHH---H-HHcCCchhhH
Confidence 00 000 000000000000000000000000 0011111111111100 00010000 0 0111222355
Q ss_pred hhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhcCCC
Q 015550 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASEKKI 325 (405)
Q Consensus 257 l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~~~~ 325 (405)
++++++|+|+|+|++|.++|++..+++.+.+ ++++++++++||+++.|+|+++++.|.+|+++.....
T Consensus 203 l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~-~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 270 (276)
T TIGR02240 203 LHKIQQPTLVLAGDDDPIIPLINMRLLAWRI-PNAELHIIDDGHLFLITRAEAVAPIIMKFLAEERQRA 270 (276)
T ss_pred hhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC-CCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhhhhc
Confidence 7889999999999999999999999999987 8899999988999999999999999999999877653
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5e-33 Score=258.16 Aligned_cols=274 Identities=16% Similarity=0.195 Sum_probs=178.5
Q ss_pred CCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+.++++.+|.+++|.+.|+++ +|||+||++++...|..+++.|.+ .++|+++|+|
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~D~~ 62 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGEGD-PIVFLHGNPTSSYLWRNIIPHLAG-----------------------LGRCLAPDLI 62 (295)
T ss_pred CcceEEEECCEEEEEEEeCCCC-EEEEECCCCCCHHHHHHHHHHHhh-----------------------CCEEEEEcCC
Confidence 3456688899999999999765 699999999999999999999987 5699999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|||.|+.+.. .++.+++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++.... .........
T Consensus 63 G~G~S~~~~~--~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~-~~~~~~~~~ 139 (295)
T PRK03592 63 GMGASDKPDI--DYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRP-MTWDDFPPA 139 (295)
T ss_pred CCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCC-cchhhcchh
Confidence 9999987654 6899999999999999999999999999999999999999999999999999974321 111111111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCC---chhHHHHHHHHhhhhhccc-cCcccchhh------hHHh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS---TRRAILYQEYVKGISATGM-QSNYGFDGQ------IHAC 244 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~ 244 (405)
.......+........... ....+....+... ...+.....+...+..... .....+... ....
T Consensus 140 -~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (295)
T PRK03592 140 -VRELFQALRSPGEGEEMVL-----EENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADV 213 (295)
T ss_pred -HHHHHHHHhCccccccccc-----chhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhh
Confidence 1111111111110000000 0001111111100 0011111111111110000 000000000 0000
Q ss_pred hhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
. ....+....+.++++|+|+|+|++|.++++....++...+.++++++++++ ||+++.|+|+++++.|.+|+++...
T Consensus 214 ~--~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 214 V--ALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred H--hhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 0 001112344677899999999999999955555555544448899999987 9999999999999999999987653
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.1e-32 Score=256.78 Aligned_cols=270 Identities=17% Similarity=0.181 Sum_probs=176.8
Q ss_pred CCCcccccCC-----EEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 15 APDAALNDNG-----IKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 15 ~~~~~~~~~g-----~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
-..++++.++ .+|+|.+.|+ ..|+|||+||++++...|..+++.|.+ +||+|
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~----------------------~gy~v 76 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAA----------------------AGHRV 76 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHh----------------------CCCEE
Confidence 3567788888 8999999986 346799999999999999999999986 38999
Q ss_pred EEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+++|+||||.|+.+.....++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++........
T Consensus 77 i~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 156 (302)
T PRK00870 77 IAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP 156 (302)
T ss_pred EEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc
Confidence 99999999999876544468999999999999999999999999999999999999999999999999998642111100
Q ss_pred ccchhHHHHHHHHHhhccCh---hhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 169 PKLDLQTLSIAIRFFRAKTP---EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
.. ........+...... ..............+....+...... ... ......... .. ........
T Consensus 157 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~--~~-~~~~~~~~---- 224 (302)
T PRK00870 157 MP---DAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPD-ESY-KAGARAFPL--LV-PTSPDDPA---- 224 (302)
T ss_pred ch---HHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCC-hhh-hcchhhhhh--cC-CCCCCCcc----
Confidence 00 001101111000000 00000000001111111111100000 000 000000000 00 00000000
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeE---EEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR---MIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~---l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..........+.++++|+++|+|++|.++|... +.+.+.+ ++++ ++++++ ||++++|+|+++++.|.+|++++
T Consensus 225 -~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 225 -VAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRI-PGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred -hHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhc-ccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 000111234567899999999999999999866 7788876 6665 888998 99999999999999999999764
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.4e-32 Score=257.98 Aligned_cols=274 Identities=20% Similarity=0.235 Sum_probs=175.6
Q ss_pred CcccccCCE-EEEEEEccCC-----CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 17 DAALNDNGI-KIFYRTYGRG-----PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 17 ~~~~~~~g~-~i~y~~~G~~-----~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.+++.++|. +++|.+.|++ .|+|||+||++++...|.+++..|.+ +|+|++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via 119 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-----------------------NYTVYA 119 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEE
Confidence 344667777 9999999975 36799999999999999999999987 899999
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh-CCcccceEEEeccCCCCCCCCc
Q 015550 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~ 169 (405)
+|+||||.|+.+.. ..++++++++++.+++++++.++++|+||||||.+++.++.. +|++|+++|++++.+..... .
T Consensus 120 ~Dl~G~G~S~~~~~-~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~-~ 197 (360)
T PLN02679 120 IDLLGFGASDKPPG-FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNK-A 197 (360)
T ss_pred ECCCCCCCCCCCCC-ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccc-c
Confidence 99999999987643 368999999999999999999999999999999999998874 79999999999986422111 0
Q ss_pred cchhHHHH------HHHHHhhccChhhhhccC--cccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhh
Q 015550 170 KLDLQTLS------IAIRFFRAKTPEKRAAVD--LDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQ 240 (405)
Q Consensus 170 ~~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
........ ....++............ .........+...+... ...+...+.+....... .....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 271 (360)
T PLN02679 198 VVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDE------GALDA 271 (360)
T ss_pred ccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCC------ChHHH
Confidence 00000000 000000000000000000 00000000111111110 01111111111100000 00011
Q ss_pred hHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHH-----HHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHH
Q 015550 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY-----ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQAL 314 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~-----~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i 314 (405)
+..........+....+.++++|||+|+|++|.++|++. .+.+.+.+ ++++++++++ ||++++|+|+++++.|
T Consensus 272 ~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I 350 (360)
T PLN02679 272 FVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHDDRPDLVHEKL 350 (360)
T ss_pred HHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccccCHHHHHHHH
Confidence 111111111122345677889999999999999998763 23455555 8999999998 9999999999999999
Q ss_pred HHHHHhhc
Q 015550 315 IDLIKASE 322 (405)
Q Consensus 315 ~~fl~~~~ 322 (405)
.+||++..
T Consensus 351 ~~FL~~~~ 358 (360)
T PLN02679 351 LPWLAQLP 358 (360)
T ss_pred HHHHHhcC
Confidence 99998643
No 7
>PLN02578 hydrolase
Probab=100.00 E-value=1.3e-31 Score=254.37 Aligned_cols=273 Identities=19% Similarity=0.214 Sum_probs=177.5
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
+++..+|.+++|.+.|+++ +|||+||++++...|..+++.|.+ +|+|+++|+||||
T Consensus 69 ~~~~~~~~~i~Y~~~g~g~-~vvliHG~~~~~~~w~~~~~~l~~-----------------------~~~v~~~D~~G~G 124 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEGL-PIVLIHGFGASAFHWRYNIPELAK-----------------------KYKVYALDLLGFG 124 (354)
T ss_pred eEEEECCEEEEEEEcCCCC-eEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEECCCCCC
Confidence 5567789999999999775 599999999999999999999987 8999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch-----
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD----- 172 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----- 172 (405)
.|+.+.. .|+.+.+++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++.+..........
T Consensus 125 ~S~~~~~--~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~ 202 (354)
T PLN02578 125 WSDKALI--EYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVV 202 (354)
T ss_pred CCCCccc--ccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccccccccccccc
Confidence 9987653 789999999999999999989999999999999999999999999999999997643211000000
Q ss_pred -hHHH-----HHHHHHhhccChhhhhccCcccccCHhHHHhhhCC-CchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 173 -LQTL-----SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS-STRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 173 -~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
.... ............................+...+.. ....+...+.+...... ......+...+....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 280 (354)
T PLN02578 203 EETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAAD--PNAGEVYYRLMSRFL 280 (354)
T ss_pred ccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccC--CchHHHHHHHHHHHh
Confidence 0000 00000000000000000000000000000000110 00011111111110000 000000011111111
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~ 319 (405)
......+..+.+.++++|+++|+|++|.+++.+.++++.+.+ ++++++++++||+++.|+|+++++.|.+|++
T Consensus 281 ~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~-p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 281 FNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY-PDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred cCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 111122234567889999999999999999999999999876 8999999977999999999999999999985
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=4e-31 Score=240.27 Aligned_cols=248 Identities=19% Similarity=0.185 Sum_probs=163.3
Q ss_pred EEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 015550 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (405)
Q Consensus 26 ~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~ 105 (405)
.++|...|+|+|+|||+||++++...|.++++.|.+ .|+|+++|+||||.|+.+.
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~~-- 57 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-----------------------HFTLHLVDLPGFGRSRGFG-- 57 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhc-----------------------CCEEEEecCCCCCCCCCCC--
Confidence 378999999887899999999999999999999987 8999999999999997543
Q ss_pred CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC--CCccchhHHHHHHHHHh
Q 015550 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ--CCPKLDLQTLSIAIRFF 183 (405)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~ 183 (405)
.++.+++++++.+ +..++++++||||||.+|+.+|.++|++|+++|++++.+.... ..+.............+
T Consensus 58 -~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (256)
T PRK10349 58 -ALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQL 132 (256)
T ss_pred -CCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHH
Confidence 5688777777653 5678999999999999999999999999999999998643211 11111111111111101
Q ss_pred hccChhhhhccCcccccCHhHHHhh-hCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCC
Q 015550 184 RAKTPEKRAAVDLDTHYSQEYLEEY-VGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (405)
..... .....++... ......... ...+...+....... ..............+..+.+.++++
T Consensus 133 ~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~ 197 (256)
T PRK10349 133 SDDFQ----------RTVERFLALQTMGTETARQD-ARALKKTVLALPMPE----VDVLNGGLEILKTVDLRQPLQNVSM 197 (256)
T ss_pred HhchH----------HHHHHHHHHHHccCchHHHH-HHHHHHHhhccCCCc----HHHHHHHHHHHHhCccHHHHhhcCC
Confidence 00000 0001111100 011111111 111111111100000 0001100000011233456788999
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
|||+|+|++|.++|.+.++.+.+.+ ++++++++++ ||++++|+|++|++.|.+|-.
T Consensus 198 P~lii~G~~D~~~~~~~~~~~~~~i-~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 198 PFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CeEEEecCCCccCCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 9999999999999999998888876 9999999998 999999999999999999854
No 9
>PRK06489 hypothetical protein; Provisional
Probab=99.98 E-value=1.1e-30 Score=248.88 Aligned_cols=276 Identities=16% Similarity=0.173 Sum_probs=170.0
Q ss_pred ccCCEEEEEEEccCC--------CCeEEEEecCCCCCCchh--hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 21 NDNGIKIFYRTYGRG--------PTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 21 ~~~g~~i~y~~~G~~--------~p~vvllHG~~~~~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
..+|.+++|.+.|++ .|+|||+||++++...|. .+.+.|.... ..+..++|+||+
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~---------------~~l~~~~~~Via 110 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPG---------------QPLDASKYFIIL 110 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCC---------------CcccccCCEEEE
Confidence 468999999999974 467999999999988875 4555542100 011124899999
Q ss_pred ecCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHH-HHhCCccEE-EEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 91 FDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALM-DHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l-~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
+|+||||.|+.+... ..|+++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++.+.
T Consensus 111 ~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~ 190 (360)
T PRK06489 111 PDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPT 190 (360)
T ss_pred eCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcc
Confidence 999999999865431 1478999999988854 889999986 899999999999999999999999999987632
Q ss_pred CCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHH-----------hh-hCCCc--hhHHHHHHHHhhhhhc
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE-----------EY-VGSST--RRAILYQEYVKGISAT 229 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~--~~~~~~~~~~~~~~~~ 229 (405)
.... .................................... .+ ..... ................
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T PRK06489 191 EMSG---RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTA 267 (360)
T ss_pred cccH---HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhc
Confidence 1110 000000000011100000000000000000000000 00 00000 0001111111110000
Q ss_pred cccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHH--HHHHHHhCCCeEEEEcCC-----Cccc
Q 015550 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA--RRLAEKLYPVARMIDLPG-----GHLV 302 (405)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~--~~l~~~l~~~~~l~~~~g-----gH~~ 302 (405)
.... +...+......+..+.+.++++|||+|+|++|.++|++.+ +++++.+ |+++++++++ ||.+
T Consensus 268 ------~~~~-~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i-p~a~l~~i~~a~~~~GH~~ 339 (360)
T PRK06489 268 ------DAND-FLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV-KHGRLVLIPASPETRGHGT 339 (360)
T ss_pred ------CHHH-HHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC-cCCeEEEECCCCCCCCccc
Confidence 0000 1011111112234567888999999999999999999875 7888876 9999999986 9999
Q ss_pred cccCHHHHHHHHHHHHHhhcC
Q 015550 303 SHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 303 ~~e~p~~v~~~i~~fl~~~~~ 323 (405)
+ ++|+++++.|.+||++..+
T Consensus 340 ~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 340 T-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred c-cCHHHHHHHHHHHHHhccc
Confidence 7 8999999999999987653
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.98 E-value=1.5e-30 Score=239.96 Aligned_cols=257 Identities=21% Similarity=0.307 Sum_probs=163.0
Q ss_pred CEEEEEEEccCCCCeEEEEecCCCCCCchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 24 g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
+.+++|...|+++ +|||+||++++...|..+ +..+.+ +||+|+++|+||||.|+
T Consensus 19 ~~~~~y~~~g~~~-~ivllHG~~~~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D~~G~G~S~ 75 (282)
T TIGR03343 19 NFRIHYNEAGNGE-AVIMLHGGGPGAGGWSNYYRNIGPFVD----------------------AGYRVILKDSPGFNKSD 75 (282)
T ss_pred ceeEEEEecCCCC-eEEEECCCCCchhhHHHHHHHHHHHHh----------------------CCCEEEEECCCCCCCCC
Confidence 6779999999764 699999999988888654 344544 38999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHH
Q 015550 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (405)
.+......+ ..+++|+.+++++++.++++++||||||++++.+|.++|++|+++|++++....................
T Consensus 76 ~~~~~~~~~-~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T TIGR03343 76 AVVMDEQRG-LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLF 154 (282)
T ss_pred CCcCccccc-chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHH
Confidence 653211122 2578999999999999999999999999999999999999999999999763221101001101111111
Q ss_pred HHhhccChhhhhccCcccccCHhHHHhhh-CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh-hcccChhhhhhhh
Q 015550 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYV-GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW-MHKMTQKDIQTIR 258 (405)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 258 (405)
............ .++.... ..........+......... ............ ......+..+.++
T Consensus 155 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~ 220 (282)
T TIGR03343 155 KLYAEPSYETLK----------QMLNVFLFDQSLITEELLQGRWENIQRQ----PEHLKNFLISSQKAPLSTWDVTARLG 220 (282)
T ss_pred HHhcCCCHHHHH----------HHHhhCccCcccCcHHHHHhHHHHhhcC----HHHHHHHHHhccccccccchHHHHHh
Confidence 111110000000 0000000 00000000000000000000 000000000000 0000112335578
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
++++|+|+|+|++|.+++++.++++++.+ ++++++++++ ||+++.|+|+++++.|.+|++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~-~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNM-PDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhC-CCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 89999999999999999999999999987 9999999998 999999999999999999985
No 11
>PLN02965 Probable pheophorbidase
Probab=99.98 E-value=8.8e-31 Score=237.86 Aligned_cols=239 Identities=14% Similarity=0.124 Sum_probs=159.9
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
+|||+||++.+...|..+++.|.+ ++|+|+++|+||||.|+.+.. ..++++++++|+
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~----------------------~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl 61 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDA----------------------AGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPL 61 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhh----------------------CCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHH
Confidence 599999999999999999999955 399999999999999976543 367899999999
Q ss_pred HHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhc---
Q 015550 118 IALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA--- 193 (405)
Q Consensus 118 ~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 193 (405)
.++++.++. ++++++||||||.+++.+|.++|++|+++|++++......... ..... ...... ......
T Consensus 62 ~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~---~~~~~~-~~~~~~~~~ 134 (255)
T PLN02965 62 FALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSII---SPRLK---NVMEGT-EKIWDYTFG 134 (255)
T ss_pred HHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCc---cHHHH---hhhhcc-ccceeeeec
Confidence 999999987 4999999999999999999999999999999998632110000 00000 000000 000000
Q ss_pred --cCcc--c-ccCHhHHHhhh-CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEE
Q 015550 194 --VDLD--T-HYSQEYLEEYV-GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267 (405)
Q Consensus 194 --~~~~--~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi 267 (405)
.... . ....++....+ ........ ......+....... ... . .+....+..+++|+++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~-----~-~~~~~~~~~i~vP~lvi 199 (255)
T PLN02965 135 EGPDKPPTGIMMKPEFVRHYYYNQSPLEDY--TLSSKLLRPAPVRA-------FQD-----L-DKLPPNPEAEKVPRVYI 199 (255)
T ss_pred cCCCCCcchhhcCHHHHHHHHhcCCCHHHH--HHHHHhcCCCCCcc-------hhh-----h-hhccchhhcCCCCEEEE
Confidence 0000 0 00111211111 11111100 00001110000000 000 0 01112345688999999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 268 ~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+|++|.++|++.++.+++.+ ++++++++++ ||++++|+|++|++.|.+|++...
T Consensus 200 ~g~~D~~~~~~~~~~~~~~~-~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 200 KTAKDNLFDPVRQDVMVENW-PPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred EcCCCCCCCHHHHHHHHHhC-CcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999999987 8999999987 999999999999999999987653
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=4.5e-30 Score=235.87 Aligned_cols=268 Identities=20% Similarity=0.232 Sum_probs=175.4
Q ss_pred cccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
+.++++|.+++|.+.|+ +.|+|||+||++++...|..+++.|.+ +|+|+++|+|||
T Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~ 65 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-----------------------SFRVVAPDLPGH 65 (278)
T ss_pred ceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-----------------------CcEEEeecCCCC
Confidence 45788999999999987 357899999999999999999999987 899999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
|.|+.+.. ..++++++++|+.+++++++.++++++||||||++++.+|..+|++++++|++++................
T Consensus 66 G~S~~~~~-~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~ 144 (278)
T TIGR03056 66 GFTRAPFR-FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYM 144 (278)
T ss_pred CCCCCccc-cCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchh
Confidence 99986654 36899999999999999999999999999999999999999999999999999876422111000000000
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
..... ............................. ........+....... ........ .............
T Consensus 145 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~ 215 (278)
T TIGR03056 145 ARVLA-CNPFTPPMMSRGAADQQRVERLIRDTGSL--LDKAGMTYYGRLIRSP-----AHVDGALS-MMAQWDLAPLNRD 215 (278)
T ss_pred hHhhh-hcccchHHHHhhcccCcchhHHhhccccc--cccchhhHHHHhhcCc-----hhhhHHHH-Hhhcccccchhhh
Confidence 00000 00000000000000000000000000000 0000001110000000 00000000 0000001112245
Q ss_pred hhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 257 l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
++++++|+++|+|++|.++|++..+.+.+.+ ++++++.+++ ||+++.|.|+++++.|.+|++
T Consensus 216 ~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 216 LPRITIPLHLIAGEEDKAVPPDESKRAATRV-PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cccCCCCEEEEEeCCCcccCHHHHHHHHHhc-cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 6778999999999999999999999998876 8899999998 999999999999999999984
No 13
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=1.5e-30 Score=251.21 Aligned_cols=270 Identities=19% Similarity=0.274 Sum_probs=169.7
Q ss_pred cccCCEEEEEEEccCC----CCeEEEEecCCCCCCchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 20 LNDNGIKIFYRTYGRG----PTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~----~p~vvllHG~~~~~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+.++.+++|...|+. +|+|||+||++++...|.. +++.|.+. .+++|+|+++|+|
T Consensus 181 ~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~-------------------~~~~yrVia~Dl~ 241 (481)
T PLN03087 181 LSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDA-------------------AKSTYRLFAVDLL 241 (481)
T ss_pred EeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHH-------------------hhCCCEEEEECCC
Confidence 4467899999999863 3689999999999999985 44666520 0138999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~-~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
|||.|+.+.. ..|+++++++++. .++++++.++++++||||||++++.+|.++|++|+++|+++++..... ....
T Consensus 242 G~G~S~~p~~-~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~---~~~~ 317 (481)
T PLN03087 242 GFGRSPKPAD-SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVP---KGVQ 317 (481)
T ss_pred CCCCCcCCCC-CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccc---cchh
Confidence 9999987643 4689999999995 899999999999999999999999999999999999999997642211 1000
Q ss_pred HHHHHHHHHhhccC--hhhhhccCccccc----------------CHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcc
Q 015550 174 QTLSIAIRFFRAKT--PEKRAAVDLDTHY----------------SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (405)
Q Consensus 174 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
. ............ +..........++ ..+.+..............+.+..... ..
T Consensus 318 ~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~------~~ 390 (481)
T PLN03087 318 A-TQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTH------NA 390 (481)
T ss_pred H-HHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccc------hh
Confidence 0 000000000000 0000000000000 000000000000000000000000000 00
Q ss_pred cchhhhHHhhhc-c-cChhhhh-hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Cccccc-cCHHHH
Q 015550 236 GFDGQIHACWMH-K-MTQKDIQ-TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH-ERTEEV 310 (405)
Q Consensus 236 ~~~~~~~~~~~~-~-~~~~~~~-~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~-e~p~~v 310 (405)
.+ ..+...... . ...+.++ ...++++|+|+|+|++|.++|++..+.+++.+ |+++++++++ ||++++ |+|+++
T Consensus 391 ~~-~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i-P~a~l~vI~~aGH~~~v~e~p~~f 468 (481)
T PLN03087 391 AW-HTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV-PRARVKVIDDKDHITIVVGRQKEF 468 (481)
T ss_pred hH-HHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCcchhhcCHHHH
Confidence 00 000000000 0 0011122 23468999999999999999999999999987 9999999998 999886 999999
Q ss_pred HHHHHHHHHhh
Q 015550 311 NQALIDLIKAS 321 (405)
Q Consensus 311 ~~~i~~fl~~~ 321 (405)
++.|.+|++..
T Consensus 469 a~~L~~F~~~~ 479 (481)
T PLN03087 469 ARELEEIWRRS 479 (481)
T ss_pred HHHHHHHhhcc
Confidence 99999999654
No 14
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=9.1e-31 Score=241.46 Aligned_cols=263 Identities=16% Similarity=0.203 Sum_probs=169.5
Q ss_pred CCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
...++++++|.+++|...|++ |+|||+||++.+...|..+++.|.+ +|+|+++|+|
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~~-~~iv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~ 69 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGTG-PPILLCHGNPTWSFLYRDIIVALRD-----------------------RFRCVAPDYL 69 (286)
T ss_pred ccceEEEcCCcEEEEEECCCC-CEEEEECCCCccHHHHHHHHHHHhC-----------------------CcEEEEECCC
Confidence 455678899999999999976 5699999999888889999999987 8999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|||.|+.+.. ..++.+++++++.+++++++.++++++||||||.+++.+|..+|++|+++|++++...... .....
T Consensus 70 G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~ 145 (286)
T PRK03204 70 GFGLSERPSG-FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPAD---TLAMK 145 (286)
T ss_pred CCCCCCCCCc-cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCC---chhHH
Confidence 9999986653 3678999999999999999999999999999999999999999999999999886531110 00000
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc-ccChhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH-KMTQKD 253 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 253 (405)
. ...+... .+....... .......++...... .........+........ ....+...... ......
T Consensus 146 ~---~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 213 (286)
T PRK03204 146 A---FSRVMSS-PPVQYAILR-RNFFVERLIPAGTEH-RPSSAVMAHYRAVQPNAA------ARRGVAEMPKQILAARPL 213 (286)
T ss_pred H---HHHHhcc-ccchhhhhh-hhHHHHHhccccccC-CCCHHHHHHhcCCCCCHH------HHHHHHHHHHhcchhhHH
Confidence 0 0010100 000000000 000000000000000 000011111111000000 00000000000 000000
Q ss_pred h----hhhh--hcCCcEEEEeecCCccCCHH-HHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 254 I----QTIR--SAGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 254 ~----~~l~--~i~~Pvlvi~G~~D~~~~~~-~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
. ..+. .+++||++|+|++|.++++. ..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+
T Consensus 214 ~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~i-p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 214 LARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATF-PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhc-CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 0 1111 12799999999999988654 567777876 8999999998 99999999999999999997
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=1.1e-29 Score=229.98 Aligned_cols=252 Identities=28% Similarity=0.419 Sum_probs=167.0
Q ss_pred EEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC
Q 015550 27 IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (405)
Q Consensus 27 i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~ 103 (405)
++|..+|+ +.|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|..+.
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~G~S~~~~ 57 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-----------------------RFHVVTYDHRGTGRSPGEL 57 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-----------------------ccEEEEEcCCCCCCCCCCC
Confidence 46778884 467899999999999999999998887 8999999999999998654
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHh
Q 015550 104 KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF 183 (405)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (405)
. ..++.+++++++.+++++++.++++++||||||++|+.+|.++|++|+++|++++..... + ...........++
T Consensus 58 ~-~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~---~-~~~~~~~~~~~~~ 132 (257)
T TIGR03611 58 P-PGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD---P-HTRRCFDVRIALL 132 (257)
T ss_pred c-ccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC---h-hHHHHHHHHHHHH
Confidence 3 468999999999999999999999999999999999999999999999999998753211 0 0000010111111
Q ss_pred hccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCc
Q 015550 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (405)
................+...++..... .......... ............ +......+....+.++++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~P 200 (257)
T TIGR03611 133 QHAGPEAYVHAQALFLYPADWISENAA------RLAADEAHAL-----AHFPGKANVLRR-INALEAFDVSARLDRIQHP 200 (257)
T ss_pred hccCcchhhhhhhhhhccccHhhccch------hhhhhhhhcc-----cccCccHHHHHH-HHHHHcCCcHHHhcccCcc
Confidence 110000000000000000011110000 0000000000 000000000000 0000111223456778999
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 264 vlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+++++|++|.++|++.++++.+.+ ++++++.+++ ||+++.++|+++++.|.+||+
T Consensus 201 ~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 201 VLLIANRDDMLVPYTQSLRLAAAL-PNAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred EEEEecCcCcccCHHHHHHHHHhc-CCceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999999999986 8899999987 999999999999999999985
No 16
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=3e-29 Score=237.76 Aligned_cols=261 Identities=19% Similarity=0.239 Sum_probs=172.8
Q ss_pred ccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
.++.+|++++|.+.|+ ++|+|||+||++++...|+.+++.|.+ +|+|+++|+||||
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~Via~DlpG~G 165 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-----------------------NYHAIAFDWLGFG 165 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEECCCCCC
Confidence 4678999999999996 357899999999999999999999987 8999999999999
Q ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 98 RSSVPVKK--TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 98 ~S~~~~~~--~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
.|+.+... ..++++++++++.+++++++.++++|+|||+||++++.+|.++|++|+++|++++....... ... ..
T Consensus 166 ~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~--~~p-~~ 242 (383)
T PLN03084 166 FSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHA--KLP-ST 242 (383)
T ss_pred CCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccc--cch-HH
Confidence 99876532 36899999999999999999999999999999999999999999999999999986421100 001 00
Q ss_pred HHHHHHHhh----ccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc--
Q 015550 176 LSIAIRFFR----AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM-- 249 (405)
Q Consensus 176 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 249 (405)
.......+. ...+.... ...+.. .............+...+...+.. .......... +....
T Consensus 243 l~~~~~~l~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~-~~~l~~~~r~-~~~~l~~ 310 (383)
T PLN03084 243 LSEFSNFLLGEIFSQDPLRAS---------DKALTS-CGPYAMKEDDAMVYRRPYLTSGSS-GFALNAISRS-MKKELKK 310 (383)
T ss_pred HHHHHHHHhhhhhhcchHHHH---------hhhhcc-cCccCCCHHHHHHHhccccCCcch-HHHHHHHHHH-hhcccch
Confidence 110100000 00000000 000000 000000111111111111110000 0000000000 00000
Q ss_pred -Chhhhhhh--hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 250 -TQKDIQTI--RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 250 -~~~~~~~l--~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
..+....+ ..+++||++|+|++|.+++.+.++.+++. .+++++++++ ||++++|+|+++++.|.+|++
T Consensus 311 ~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~--~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 311 YIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS--SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred hhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh--cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 00000111 35789999999999999999998888885 4789999998 999999999999999999986
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=2.8e-29 Score=238.25 Aligned_cols=266 Identities=17% Similarity=0.195 Sum_probs=172.4
Q ss_pred CcccccCCEEEEEEEccC----CCCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 17 DAALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
...++.+|.+|+|..+++ .+++|||+||++++... |..++..|.+ +||+|+++
T Consensus 64 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~ 121 (349)
T PLN02385 64 SYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIAS----------------------SGYGVFAM 121 (349)
T ss_pred eeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHh----------------------CCCEEEEe
Confidence 345677999999999875 24579999999988764 6888888986 49999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc------cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK------QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
|+||||.|+.+.. ...+++++++|+.++++.+... +++|+||||||++++.+|.++|++|+++|++++.....
T Consensus 122 D~~G~G~S~~~~~-~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~ 200 (349)
T PLN02385 122 DYPGFGLSEGLHG-YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIA 200 (349)
T ss_pred cCCCCCCCCCCCC-CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccc
Confidence 9999999986542 2458899999999999887542 79999999999999999999999999999999864321
Q ss_pred CCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
.... ................+.... .. ...+....+.... .... ..+ ..........+...... +
T Consensus 201 ~~~~--~~~~~~~~~~~~~~~~p~~~~-~~-----~~~~~~~~~~~~~-~~~~-~~~----~~~~~~~~~~~~~~~~~-l 265 (349)
T PLN02385 201 DDVV--PPPLVLQILILLANLLPKAKL-VP-----QKDLAELAFRDLK-KRKM-AEY----NVIAYKDKPRLRTAVEL-L 265 (349)
T ss_pred cccc--CchHHHHHHHHHHHHCCCcee-cC-----CCccccccccCHH-HHHH-hhc----CcceeCCCcchHHHHHH-H
Confidence 1110 000111111111110000000 00 0000000000000 0000 000 00000000000000000 0
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHH----HHHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEE----VNQALIDLIK 319 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~----v~~~i~~fl~ 319 (405)
....+....+.++++|+|+|+|++|.++|++.++.+++.+. ++++++++++ ||+++.|+|++ +.+.|.+||+
T Consensus 266 --~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~ 343 (349)
T PLN02385 266 --RTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLD 343 (349)
T ss_pred --HHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHH
Confidence 00112334567889999999999999999999999998873 5789999998 99999998886 8888999998
Q ss_pred hhc
Q 015550 320 ASE 322 (405)
Q Consensus 320 ~~~ 322 (405)
+..
T Consensus 344 ~~~ 346 (349)
T PLN02385 344 SHS 346 (349)
T ss_pred Hhc
Confidence 764
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=1.9e-29 Score=229.00 Aligned_cols=248 Identities=20% Similarity=0.298 Sum_probs=164.3
Q ss_pred EEEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 26 KIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 26 ~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
++.|..++. ++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~G~s~~ 58 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-----------------------DHDIIQVDMRNHGLSPR 58 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-----------------------CCeEEEECCCCCCCCCC
Confidence 455655432 446899999999999999999999987 89999999999999976
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
+. .++++++++|+.+++++++.++++++||||||++++.+|..+|++|+++|++++.+.... .............
T Consensus 59 ~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~--~~~~~~~~~~~~~ 133 (255)
T PRK10673 59 DP---VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH--VRRHDEIFAAINA 133 (255)
T ss_pred CC---CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc--chhhHHHHHHHHH
Confidence 43 579999999999999999999999999999999999999999999999999986532211 0000000000000
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcC
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (405)
....... ........+..... ...........+... ...+. ....+.........+.++.++
T Consensus 134 ~~~~~~~--------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (255)
T PRK10673 134 VSEAGAT--------TRQQAAAIMRQHLN----EEGVIQFLLKSFVDG----EWRFN--VPVLWDQYPHIVGWEKIPAWP 195 (255)
T ss_pred hhhcccc--------cHHHHHHHHHHhcC----CHHHHHHHHhcCCcc----eeEee--HHHHHHhHHHHhCCcccCCCC
Confidence 0000000 00000001111100 000111111111000 00000 000110000001123456678
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 262 ~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+|+|+|+|++|..++++..+.+.+.+ ++++++++++ ||++++++|+++++.|.+||++
T Consensus 196 ~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 196 HPALFIRGGNSPYVTEAYRDDLLAQF-PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHhC-CCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999999999999999999999876 8999999998 9999999999999999999975
No 19
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=6.8e-30 Score=241.80 Aligned_cols=268 Identities=18% Similarity=0.208 Sum_probs=165.0
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCC------------chhhhHh---hhcCCCCCCCCchhhhccccCCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHD------------AWGPQLK---GLAGTDKPNDDDETILQDSVESGDGGA 84 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~------------~~~~~~~---~L~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (405)
...+|.+++|++.|++.+++||+||+.++.. .|.+++. .|.. +
T Consensus 41 ~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~----------------------~ 98 (343)
T PRK08775 41 AGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDP----------------------A 98 (343)
T ss_pred CCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCc----------------------c
Confidence 4568999999999974334777777766655 6888886 4632 2
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccE-EEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQA-HVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
+|+||++|+||||.|.. ..++.+++++|+.+++++++++++ +|+||||||++|+.+|.++|++|+++|++++...
T Consensus 99 ~~~Vi~~Dl~G~g~s~~----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 99 RFRLLAFDFIGADGSLD----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHR 174 (343)
T ss_pred ccEEEEEeCCCCCCCCC----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcccc
Confidence 89999999999998842 256889999999999999999775 7999999999999999999999999999998642
Q ss_pred CCCCCccchhHHHHHHHHHhhccC------hhh-h--hccCcccccCHhHHHhhhCCCch-----hHHHHHHHHhhhhhc
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKT------PEK-R--AAVDLDTHYSQEYLEEYVGSSTR-----RAILYQEYVKGISAT 229 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 229 (405)
.. +. .. ............. ... . ...........+.+...+..... .......+.......
T Consensus 175 ~~---~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 249 (343)
T PRK08775 175 AH---PY-AA-AWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQ 249 (343)
T ss_pred CC---HH-HH-HHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHH
Confidence 11 10 00 0110001100000 000 0 00000000011111111110000 000001011000000
Q ss_pred cccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcC-C-CccccccCH
Q 015550 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-G-GHLVSHERT 307 (405)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~-g-gH~~~~e~p 307 (405)
... .......... .... ......+.++++|+|+|+|++|.++|++..+++++.+.+++++++++ + ||++++|+|
T Consensus 250 ~~~-~~~~~~~~~~--~~~~-~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~P 325 (343)
T PRK08775 250 YVA-RTPVNAYLRL--SESI-DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKET 325 (343)
T ss_pred HHH-hcChhHHHHH--HHHH-hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCH
Confidence 000 0000000000 0000 00012357889999999999999999999999998876789999997 4 999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 015550 308 EEVNQALIDLIKASE 322 (405)
Q Consensus 308 ~~v~~~i~~fl~~~~ 322 (405)
++|++.|.+||++..
T Consensus 326 e~~~~~l~~FL~~~~ 340 (343)
T PRK08775 326 DRIDAILTTALRSTG 340 (343)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998765
No 20
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=4.7e-29 Score=236.01 Aligned_cols=273 Identities=18% Similarity=0.143 Sum_probs=164.4
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhhhH---hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQL---KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
.+.+|.+++|.+.|+ ++|+||++||+++++..|..++ +.|.. ++|+||++|
T Consensus 21 ~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D 78 (339)
T PRK07581 21 ATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDP----------------------EKYFIIIPN 78 (339)
T ss_pred CCcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCc----------------------CceEEEEec
Confidence 456899999999996 2355777777777777776543 34543 389999999
Q ss_pred CCCCCCCCCCCCC-CCCCHH-----HHHHHHHH----HHHHhCCcc-EEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 93 NRGMGRSSVPVKK-TEYTTK-----IMAKDVIA----LMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 93 ~~G~G~S~~~~~~-~~~~~~-----~~~~dl~~----~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+||||.|+.+... ..++++ .+++|+.+ +++++++++ ++|+||||||++|+.+|.++|++|++||++++.
T Consensus 79 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 79 MFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 9999999765421 134433 25666655 778899999 589999999999999999999999999999876
Q ss_pred CCCCCCCccchhHHHHHHHHHhhccC----------hh-hhh---ccCcccccCHhHHHhhhCC-C--chhHHHHHHHHh
Q 015550 162 GGGFQCCPKLDLQTLSIAIRFFRAKT----------PE-KRA---AVDLDTHYSQEYLEEYVGS-S--TRRAILYQEYVK 224 (405)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~---~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~ 224 (405)
.... + ............+.... +. ... .......+...++...... . .........+..
T Consensus 159 ~~~~---~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (339)
T PRK07581 159 AKTT---P-HNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWE 234 (339)
T ss_pred CCCC---H-HHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHH
Confidence 4211 0 00000000110010000 00 000 0000000011111110000 0 000011111111
Q ss_pred hh-hhccccCcccchhhhHHhhhccc------ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcC
Q 015550 225 GI-SATGMQSNYGFDGQIHACWMHKM------TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP 297 (405)
Q Consensus 225 ~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ 297 (405)
.. .... ...+...+........ ..+..+.++++++|||+|+|++|.++|++.++.+++.+ +++++++++
T Consensus 235 ~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i-p~a~l~~i~ 310 (339)
T PRK07581 235 GNFLPRD---PNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI-PNAELRPIE 310 (339)
T ss_pred HhhcccC---cccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEeC
Confidence 11 0000 0111111111111110 12345677889999999999999999999999999887 889999998
Q ss_pred C--CccccccCHHHHHHHHHHHHHhhc
Q 015550 298 G--GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 298 g--gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+ ||+++.++++++++.|.+||++.-
T Consensus 311 ~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 311 SIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred CCCCccccccCcHHHHHHHHHHHHHHH
Confidence 4 999999999999999999998753
No 21
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=7e-29 Score=230.19 Aligned_cols=261 Identities=25% Similarity=0.310 Sum_probs=168.2
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.+++||++|||+++...|+.++..|.+. .|+.|+++|++|+|.++..+....|+..+++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~---------------------~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v 115 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKA---------------------KGLRVLAIDLPGHGYSSPLPRGPLYTLRELV 115 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccc---------------------cceEEEEEecCCCCcCCCCCCCCceehhHHH
Confidence 3568999999999999999999999883 2599999999999965554444679999999
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhh---ccChhhh
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR---AKTPEKR 191 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 191 (405)
+.+..++....+++++++|||+||.+|+.+|+.+|+.|+++|+++-........+............+.. ...+...
T Consensus 116 ~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 195 (326)
T KOG1454|consen 116 ELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSL 195 (326)
T ss_pred HHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCcccc
Confidence 9999999999999999999999999999999999999999995552222221111111111111111111 1111000
Q ss_pred hccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc-cC--hhhhhhhhhcC-CcEEEE
Q 015550 192 AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK-MT--QKDIQTIRSAG-FLVSVI 267 (405)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~l~~i~-~Pvlvi 267 (405)
. .....+...................+.....+.... ...+.......+... .. ......++++. ||+|++
T Consensus 196 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii 270 (326)
T KOG1454|consen 196 T--EPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPV---KEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLII 270 (326)
T ss_pred c--cchhheeHhhhcceeeeccccccchhhhhhheeccc---ccchhhhheeeEEEeccCccchHHHhhccccCCceEEE
Confidence 0 000011111111111111111112222222111110 000000000000001 11 22334556666 999999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 268 ~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+|+.|.++|.+.+..+.+++ ++++++++++ ||.+++|+|+++++.|..|+....
T Consensus 271 ~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 271 WGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred EcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999998 9999999997 999999999999999999998754
No 22
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=3.8e-28 Score=228.59 Aligned_cols=274 Identities=13% Similarity=0.114 Sum_probs=172.7
Q ss_pred CcccccCCEEEEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 17 DAALNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..++..+|.+++|..+++ ++++||++||++++...|..++..|.+ +||+|+++|+|
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~----------------------~g~~v~~~D~~ 90 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFH----------------------LGYDVLIIDHR 90 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHH----------------------CCCeEEEEcCC
Confidence 455678999999999875 456899999999988889999988876 49999999999
Q ss_pred CCCCCCCCCCC----CCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 95 GMGRSSVPVKK----TEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 95 G~G~S~~~~~~----~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
|||.|+.+... ...+++++++|+.++++++ +..+++++||||||.+++.+|.++|++|+++|+++|......
T Consensus 91 G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~ 170 (330)
T PRK10749 91 GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVL 170 (330)
T ss_pred CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCC
Confidence 99999754321 2358999999999999987 667999999999999999999999999999999988643211
Q ss_pred CCccchhHHHHHHHHHhhccChhhhhc--cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhcccc-CcccchhhhHH
Q 015550 167 CCPKLDLQTLSIAIRFFRAKTPEKRAA--VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ-SNYGFDGQIHA 243 (405)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 243 (405)
..+. ............. ...... .....+....+...... .....+..+.+.+...... ...........
T Consensus 171 ~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (330)
T PRK10749 171 PLPS---WMARRILNWAEGH-PRIRDGYAIGTGRWRPLPFAINVLT---HSRERYRRNLRFYADDPELRVGGPTYHWVRE 243 (330)
T ss_pred CCCc---HHHHHHHHHHHHh-cCCCCcCCCCCCCCCCCCcCCCCCC---CCHHHHHHHHHHHHhCCCcccCCCcHHHHHH
Confidence 1111 1111111111000 000000 00000000000000000 0111111111211111100 00000000000
Q ss_pred hhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC------CCeEEEEcCC-CccccccCH---HHHHHH
Q 015550 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY------PVARMIDLPG-GHLVSHERT---EEVNQA 313 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~------~~~~l~~~~g-gH~~~~e~p---~~v~~~ 313 (405)
.. .........+.++++|+|+|+|++|.+++++.++.+++.+. ++++++++++ ||.++.|.+ +.+.+.
T Consensus 244 ~~--~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~ 321 (330)
T PRK10749 244 SI--LAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNA 321 (330)
T ss_pred HH--HHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHH
Confidence 00 00011234567789999999999999999999998888662 4568999998 999998875 678889
Q ss_pred HHHHHHhh
Q 015550 314 LIDLIKAS 321 (405)
Q Consensus 314 i~~fl~~~ 321 (405)
|.+||++.
T Consensus 322 i~~fl~~~ 329 (330)
T PRK10749 322 IVDFFNRH 329 (330)
T ss_pred HHHHHhhc
Confidence 99999764
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=5.7e-29 Score=223.88 Aligned_cols=245 Identities=27% Similarity=0.388 Sum_probs=165.5
Q ss_pred EEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC
Q 015550 27 IFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (405)
Q Consensus 27 i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~ 104 (405)
++|...|+ ++|+|||+||++.+...|.++++.|.. +|+|+++|+||||.|+.+.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~- 57 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-----------------------DFRVLRYDKRGHGLSDAPE- 57 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-----------------------ccEEEEecCCCCCCCCCCC-
Confidence 67877886 467899999999999999999999876 9999999999999997554
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhh
Q 015550 105 KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR 184 (405)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (405)
..++++++++|+.++++.++.++++++||||||++++.+|.++|++|+++|++++...... ...+........
T Consensus 58 -~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~------~~~~~~~~~~~~ 130 (251)
T TIGR02427 58 -GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGT------PESWNARIAAVR 130 (251)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCc------hhhHHHHHhhhh
Confidence 3679999999999999999989999999999999999999999999999999987532111 000000000000
Q ss_pred ccChhhhhccCcccccCHhHHHhhhCCC--chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCC
Q 015550 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (405)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (405)
....... .......++... .......+.+...+..... ......+......+....+.++++
T Consensus 131 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 194 (251)
T TIGR02427 131 AEGLAAL---------ADAVLERWFTPGFREAHPARLDLYRNMLVRQPP-------DGYAGCCAAIRDADFRDRLGAIAV 194 (251)
T ss_pred hccHHHH---------HHHHHHHHcccccccCChHHHHHHHHHHHhcCH-------HHHHHHHHHHhcccHHHHhhhcCC
Confidence 0000000 000000000000 0000001111111111000 000000000111223345678899
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
|+++++|++|.++|.+..+.+.+.+ ++.+++++++ ||++++++|+++.+.|.+|++
T Consensus 195 Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 195 PTLCIAGDQDGSTPPELVREIADLV-PGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CeEEEEeccCCcCChHHHHHHHHhC-CCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 9999999999999999999998876 8889999997 999999999999999999973
No 24
>PHA02857 monoglyceride lipase; Provisional
Probab=99.96 E-value=2.6e-28 Score=224.30 Aligned_cols=257 Identities=16% Similarity=0.182 Sum_probs=166.0
Q ss_pred ccccCCEEEEEEEccCC---CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 19 ALNDNGIKIFYRTYGRG---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~~---~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+++.||.+|+|+.+-++ ++.|+++||+++++..|..+++.|.+ +||+|+++|+||
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~----------------------~g~~via~D~~G 62 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISS----------------------LGILVFSHDHIG 62 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHh----------------------CCCEEEEccCCC
Confidence 46679999999887653 34566679999999999999999987 499999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
||.|+.... ...++.++++|+.+.++.+ ...+++++||||||++|+.+|.++|++|+++|++++.... ...+.
T Consensus 63 ~G~S~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~-~~~~~- 139 (276)
T PHA02857 63 HGRSNGEKM-MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA-EAVPR- 139 (276)
T ss_pred CCCCCCccC-CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc-ccccH-
Confidence 999975332 2346667778887777654 3458999999999999999999999999999999986421 11000
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh-hHHhhhcccC
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ-IHACWMHKMT 250 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 250 (405)
............ .+. ..........+ .... ... ..+.. .. .......... ..... ...
T Consensus 140 -~~~~~~~~~~~~--~~~-----~~~~~~~~~~~----~~~~--~~~-~~~~~---~~-~~~~~~~~~~~~~~~~--~~~ 198 (276)
T PHA02857 140 -LNLLAAKLMGIF--YPN-----KIVGKLCPESV----SRDM--DEV-YKYQY---DP-LVNHEKIKAGFASQVL--KAT 198 (276)
T ss_pred -HHHHHHHHHHHh--CCC-----CccCCCCHhhc----cCCH--HHH-HHHhc---CC-CccCCCccHHHHHHHH--HHH
Confidence 000000000000 000 00000000000 0000 000 00000 00 0000000000 00000 011
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCH---HHHHHHHHHHHHhh
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT---EEVNQALIDLIKAS 321 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p---~~v~~~i~~fl~~~ 321 (405)
.+..+.+.++++|+|+|+|++|.++|++.++++.+.+.++++++++++ ||.++.|++ +++.+.+.+||+..
T Consensus 199 ~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 199 NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 223456778999999999999999999999999998756789999998 999999865 57899999999875
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=8.2e-29 Score=222.17 Aligned_cols=240 Identities=17% Similarity=0.146 Sum_probs=154.2
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
|+++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+... .+++++
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~d~~G~G~s~~~~---~~~~~~ 54 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-----------------------HFTLHLVDLPGHGRSRGFG---PLSLAD 54 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-----------------------CeEEEEecCCcCccCCCCC---CcCHHH
Confidence 45667899999999999999999999987 8999999999999986543 467888
Q ss_pred HHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC--Cc-cchhHHHHHHHHHhhccChh
Q 015550 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--CP-KLDLQTLSIAIRFFRAKTPE 189 (405)
Q Consensus 113 ~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~ 189 (405)
+++++.+.+ .++++++||||||.+++.+|.++|++|+++|++++.+..... .+ .............+...
T Consensus 55 ~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 127 (245)
T TIGR01738 55 AAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDD--- 127 (245)
T ss_pred HHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhh---
Confidence 888776554 279999999999999999999999999999999876422110 11 01111111110000000
Q ss_pred hhhccCcccccCHhHHH-hhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 190 KRAAVDLDTHYSQEYLE-EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 190 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
.... ...+.. ........... ...+...+....... ...+...+......+....+.++++|+++++
T Consensus 128 ~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 195 (245)
T TIGR01738 128 YQRT-------IERFLALQTLGTPTARQD-ARALKQTLLARPTPN----VQVLQAGLEILATVDLRQPLQNISVPFLRLY 195 (245)
T ss_pred HHHH-------HHHHHHHHHhcCCccchH-HHHHHHHhhccCCCC----HHHHHHHHHHhhcccHHHHHhcCCCCEEEEe
Confidence 0000 000000 00000000000 011111111000000 0011111111111233456778999999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
|++|.++|++..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+
T Consensus 196 g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 196 GYLDGLVPAKVVPYLDKLA-PHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred ecCCcccCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999998876 8999999997 99999999999999999985
No 26
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=2.6e-28 Score=231.76 Aligned_cols=273 Identities=20% Similarity=0.208 Sum_probs=165.0
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCC-----------chhhhH---hhhcCCCCCCCCchhhhccccCCCC
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHD-----------AWGPQL---KGLAGTDKPNDDDETILQDSVESGD 81 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~-----------~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~l 81 (405)
..++|.+|+|.++|+ ++++|||+||+++++. .|+.++ ..|..
T Consensus 11 ~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-------------------- 70 (351)
T TIGR01392 11 GVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT-------------------- 70 (351)
T ss_pred CccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC--------------------
Confidence 345899999999995 3568999999999763 366665 23332
Q ss_pred CCCCeEEEEecCCC--CCCCCCC----CC------CCCCCHHHHHHHHHHHHHHhCCcc-EEEEEEChhHHHHHHHHHhC
Q 015550 82 GGAGIEVCAFDNRG--MGRSSVP----VK------KTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 82 ~~~g~~Vi~~D~~G--~G~S~~~----~~------~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~ 148 (405)
++|+|+++|+|| ||.|... .. ...++++++++|+.++++++++++ ++++||||||++++.+|.++
T Consensus 71 --~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 71 --DRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred --CceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 399999999999 5655431 11 125789999999999999999998 99999999999999999999
Q ss_pred CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccC------------hh-hh---hccCcccccCHhHHHhhhCCC
Q 015550 149 PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT------------PE-KR---AAVDLDTHYSQEYLEEYVGSS 212 (405)
Q Consensus 149 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~---~~~~~~~~~~~~~~~~~~~~~ 212 (405)
|++|+++|++++...... ............+.... +. .. ...........+.+...+...
T Consensus 149 p~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 224 (351)
T TIGR01392 149 PERVRAIVVLATSARHSA----WCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRA 224 (351)
T ss_pred hHhhheEEEEccCCcCCH----HHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcC
Confidence 999999999998642110 00000000001110000 00 00 000000000111111111110
Q ss_pred c-hh---------HHHHHHHHhhhhhcccc--CcccchhhhHHhhhcccC---hhhhhhhhhcCCcEEEEeecCCccCCH
Q 015550 213 T-RR---------AILYQEYVKGISATGMQ--SNYGFDGQIHACWMHKMT---QKDIQTIRSAGFLVSVIHGRHDVIAQI 277 (405)
Q Consensus 213 ~-~~---------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvlvi~G~~D~~~~~ 277 (405)
. .. ....+.+.......... ....+.......-..... .+..+.++++++|+|+|+|++|.++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~ 304 (351)
T TIGR01392 225 PQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPP 304 (351)
T ss_pred cccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCH
Confidence 0 00 00001111000000000 000000000111111110 233567888999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEE-----EcCC-CccccccCHHHHHHHHHHHHH
Q 015550 278 CYARRLAEKLYPVARMI-----DLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 278 ~~~~~l~~~l~~~~~l~-----~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+.++.+++.+ ++++++ ++++ ||++++++|+++++.|.+||+
T Consensus 305 ~~~~~~a~~i-~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 305 AESRELAKAL-PAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHH-hhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 9999999987 777655 4566 999999999999999999984
No 27
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.96 E-value=7e-28 Score=220.36 Aligned_cols=257 Identities=12% Similarity=0.094 Sum_probs=166.5
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
||.+++|.+.+..+|+|||+||++++...|.+++..|.+ +||+|+++|+||||.|...
T Consensus 5 ~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~----------------------~g~~vi~~dl~g~G~s~~~ 62 (273)
T PLN02211 5 NGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMEN----------------------SGYKVTCIDLKSAGIDQSD 62 (273)
T ss_pred cccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHh----------------------CCCEEEEecccCCCCCCCC
Confidence 788899988656667899999999999999999999976 3999999999999998543
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 103 VKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
.. ..++++++++++.+++++++ .++++++||||||+++..++.++|++|+++|++++...... + .....+.....
T Consensus 63 ~~-~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g-~--~~~~~~~~~~~ 138 (273)
T PLN02211 63 AD-SVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLG-F--QTDEDMKDGVP 138 (273)
T ss_pred cc-cCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCC-C--CHHHHHhcccc
Confidence 32 24799999999999999985 58999999999999999999999999999999987532100 0 00000000000
Q ss_pred HhhccChh----hhh-c--cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 182 FFRAKTPE----KRA-A--VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 182 ~~~~~~~~----~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
.+...... ... . .........++...++.... .................. .+ ...+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~-----------~~~~~~ 203 (273)
T PLN02211 139 DLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMS-PQEDSTLAAMLLRPGPIL---AL-----------RSARFE 203 (273)
T ss_pred chhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCC-CHHHHHHHHHhcCCcCcc---cc-----------cccccc
Confidence 00000000 000 0 00000011122221111111 000000000000000000 00 000111
Q ss_pred hhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 255 QTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 255 ~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+....+ ++|+++|.|++|.++|++.++.+++.+ +..+++.+++||.+++++|+++++.|.++....
T Consensus 204 ~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~-~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 204 EETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRW-PPSQVYELESDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred ccccccCccceEEEEeCCCCCCCHHHHHHHHHhC-CccEEEEECCCCCccccCHHHHHHHHHHHHHHh
Confidence 112233 689999999999999999999999987 777999998899999999999999999987654
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=9e-28 Score=229.87 Aligned_cols=277 Identities=18% Similarity=0.177 Sum_probs=166.8
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCCc-------------hhhhHh---hhcCCCCCCCCchhhhccccCC
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDA-------------WGPQLK---GLAGTDKPNDDDETILQDSVES 79 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~-------------~~~~~~---~L~~~~~~~~~~~~~~~~~~~~ 79 (405)
..++|.+++|..+|+ ++|+|||+||+++++.. |..++. .|..
T Consensus 28 ~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~------------------ 89 (379)
T PRK00175 28 AVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT------------------ 89 (379)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc------------------
Confidence 556889999999995 25789999999999975 444442 2211
Q ss_pred CCCCCCeEEEEecCCCC-CCCCCCCC------------CCCCCHHHHHHHHHHHHHHhCCcc-EEEEEEChhHHHHHHHH
Q 015550 80 GDGGAGIEVCAFDNRGM-GRSSVPVK------------KTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLA 145 (405)
Q Consensus 80 ~l~~~g~~Vi~~D~~G~-G~S~~~~~------------~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a 145 (405)
++|+||++|++|+ |.|+.+.. ...++++++++++.++++++++++ ++++||||||++++.+|
T Consensus 90 ----~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a 165 (379)
T PRK00175 90 ----DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWA 165 (379)
T ss_pred ----cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHH
Confidence 3999999999983 54533210 015899999999999999999999 59999999999999999
Q ss_pred HhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc-------------Chhhhh-ccC---cccccCHhHHHhh
Q 015550 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK-------------TPEKRA-AVD---LDTHYSQEYLEEY 208 (405)
Q Consensus 146 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~-~~~---~~~~~~~~~~~~~ 208 (405)
.++|++|+++|++++...... . ...........+... .+.... ... .........+...
T Consensus 166 ~~~p~~v~~lvl~~~~~~~~~---~-~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~ 241 (379)
T PRK00175 166 IDYPDRVRSALVIASSARLSA---Q-NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEK 241 (379)
T ss_pred HhChHhhhEEEEECCCcccCH---H-HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhh
Confidence 999999999999998642110 0 000000000110000 000000 000 0000000001111
Q ss_pred hCCCchhH---------HHHHHHHhhhhhc--cccCcccchhhhHHhhhcccC----hhhhhhhhhcCCcEEEEeecCCc
Q 015550 209 VGSSTRRA---------ILYQEYVKGISAT--GMQSNYGFDGQIHACWMHKMT----QKDIQTIRSAGFLVSVIHGRHDV 273 (405)
Q Consensus 209 ~~~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~Pvlvi~G~~D~ 273 (405)
+....... ...+.+....... .......+............. .+..+.+.+|++|+|+|+|++|.
T Consensus 242 f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~ 321 (379)
T PRK00175 242 FGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDW 321 (379)
T ss_pred cCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCcc
Confidence 10000000 0000110000000 000000000000110001100 12456788999999999999999
Q ss_pred cCCHHHHHHHHHHhCCCe----EEEEcC-C-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 274 IAQICYARRLAEKLYPVA----RMIDLP-G-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 274 ~~~~~~~~~l~~~l~~~~----~l~~~~-g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
++|++.++.+++.+ +++ ++++++ + ||++++|+|+++++.|.+||++...
T Consensus 322 ~~p~~~~~~la~~i-~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 322 LFPPARSREIVDAL-LAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred ccCHHHHHHHHHHH-HhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 99999999999988 655 777775 6 9999999999999999999998653
No 29
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=3.6e-27 Score=222.35 Aligned_cols=265 Identities=15% Similarity=0.168 Sum_probs=166.1
Q ss_pred cccccCCEEEEEEEccC-----CCCeEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 18 AALNDNGIKIFYRTYGR-----GPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-----~~p~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
.+...+|.+|+|+.+++ ..++|||+||++.+. ..|..++..|.. +||+|+++
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~----------------------~Gy~V~~~ 93 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQ----------------------MGFACFAL 93 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHh----------------------CCCEEEEe
Confidence 44567999999988764 234699999998664 346667777876 49999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC------ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
|+||||.|+.... ...+++.+++|+.++++.+.. .+++|+||||||++++.++.++|++|+++|++++.....
T Consensus 94 D~rGhG~S~~~~~-~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 94 DLEGHGRSEGLRA-YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKIS 172 (330)
T ss_pred cCCCCCCCCCccc-cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCC
Confidence 9999999975432 245788999999999998753 369999999999999999999999999999999864322
Q ss_pred CCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
..... ... ......+.....+..... . ....+...... . ....+.. ........... ........
T Consensus 173 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~----~-~~~~~~~-~~~~~~~~~~~-~~~~~~~~ 237 (330)
T PLN02298 173 DKIRP-PWP-IPQILTFVARFLPTLAIV-P-----TADLLEKSVKV----P-AKKIIAK-RNPMRYNGKPR-LGTVVELL 237 (330)
T ss_pred cccCC-chH-HHHHHHHHHHHCCCCccc-c-----CCCcccccccC----H-HHHHHHH-hCccccCCCcc-HHHHHHHH
Confidence 11110 000 001111111000000000 0 00000000000 0 0000000 00000000000 00000000
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHH----HHHHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTE----EVNQALIDLIK 319 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~----~v~~~i~~fl~ 319 (405)
.........+..+++|+|+|+|++|.++|++.++++++.+. ++++++++++ ||.+++++|+ ++.+.|.+||.
T Consensus 238 --~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~ 315 (330)
T PLN02298 238 --RVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLN 315 (330)
T ss_pred --HHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHH
Confidence 01111235567889999999999999999999999998773 5789999998 9999998875 46778888998
Q ss_pred hhc
Q 015550 320 ASE 322 (405)
Q Consensus 320 ~~~ 322 (405)
+..
T Consensus 316 ~~~ 318 (330)
T PLN02298 316 ERC 318 (330)
T ss_pred Hhc
Confidence 874
No 30
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=3.8e-28 Score=214.85 Aligned_cols=226 Identities=30% Similarity=0.449 Sum_probs=153.4
Q ss_pred EEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 015550 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (405)
Q Consensus 39 vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (405)
|||+||++++...|.++++.|.+ ||+|+++|+||+|.|+.+.....++++++++|+.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~ 57 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALAR-----------------------GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLA 57 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHT-----------------------TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEecCCccccccccccCCcchhhhhhhhh
Confidence 79999999999999999999975 9999999999999998766434689999999999
Q ss_pred HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCccc
Q 015550 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198 (405)
Q Consensus 119 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (405)
+++++++.++++++|||+||.+++.++.++|++|+++|++++......... .....................
T Consensus 58 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------ 129 (228)
T PF12697_consen 58 ELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPS--RSFGPSFIRRLLAWRSRSLRR------ 129 (228)
T ss_dssp HHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHC--HHHHHHHHHHHHHHHHHHHHH------
T ss_pred hcccccccccccccccccccccccccccccccccccceeeccccccccccc--ccccchhhhhhhhcccccccc------
Confidence 999999999999999999999999999999999999999998741100000 000000111111000000000
Q ss_pred ccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc-ccChhhhhhhhhcCCcEEEEeecCCccCCH
Q 015550 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH-KMTQKDIQTIRSAGFLVSVIHGRHDVIAQI 277 (405)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~ 277 (405)
.....+........ ...+... ....+..++.. ....+....++.+++|+++++|++|.+++.
T Consensus 130 -~~~~~~~~~~~~~~-----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~ 192 (228)
T PF12697_consen 130 -LASRFFYRWFDGDE-----PEDLIRS-----------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPP 192 (228)
T ss_dssp -HHHHHHHHHHTHHH-----HHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHH
T ss_pred -cccccccccccccc-----ccccccc-----------cccccccccccccccccccccccccCCCeEEeecCCCCCCCH
Confidence 00000111110000 0000000 00000000100 112233466778899999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHH
Q 015550 278 CYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 278 ~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
+..+.+.+.+ ++++++++++ ||++++++|++++++
T Consensus 193 ~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 193 ESAEELADKL-PNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHS-TTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHHHHHC-CCCEEEEECCCCCccHHHCHHHHhcC
Confidence 9999999876 8999999997 999999999999874
No 31
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=7.7e-28 Score=216.70 Aligned_cols=234 Identities=15% Similarity=0.141 Sum_probs=148.3
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
+.|+|||+||++++...|.++++.| + +|+|+++|+||||.|+.+. ..++++++
T Consensus 1 ~~p~vvllHG~~~~~~~w~~~~~~l-~-----------------------~~~vi~~D~~G~G~S~~~~---~~~~~~~~ 53 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQDWQPVGEAL-P-----------------------DYPRLYIDLPGHGGSAAIS---VDGFADVS 53 (242)
T ss_pred CCCEEEEECCCCCChHHHHHHHHHc-C-----------------------CCCEEEecCCCCCCCCCcc---ccCHHHHH
Confidence 3567999999999999999999987 4 7999999999999998654 34899999
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcc-cceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhc
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (405)
+|+.+++++++.++++++||||||.+|+.+|.++|++ |++++++++...... ... ..........+.....
T Consensus 54 ~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~------ 125 (242)
T PRK11126 54 RLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQN-AEE-RQARWQNDRQWAQRFR------ 125 (242)
T ss_pred HHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCC-HHH-HHHHHhhhHHHHHHhc------
Confidence 9999999999999999999999999999999999765 999999886532110 000 0000000000000000
Q ss_pred cCcccccCHhHHHhhh-----CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 194 VDLDTHYSQEYLEEYV-----GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 194 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
.......+..++ ..... .....+....... ........... .......+..+.+.+++||+++|+
T Consensus 126 ----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~l~~i~~P~lii~ 195 (242)
T PRK11126 126 ----QEPLEQVLADWYQQPVFASLNA--EQRQQLVAKRSNN---NGAAVAAMLEA-TSLAKQPDLRPALQALTFPFYYLC 195 (242)
T ss_pred ----cCcHHHHHHHHHhcchhhccCc--cHHHHHHHhcccC---CHHHHHHHHHh-cCcccCCcHHHHhhccCCCeEEEE
Confidence 000001111110 00000 0001111100000 00000000000 000111233456788999999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
|++|..+. .++++ .+++++++++ ||+++.|+|+++++.|.+|++.
T Consensus 196 G~~D~~~~-----~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 196 GERDSKFQ-----ALAQQ--LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred eCCcchHH-----HHHHH--hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 99998542 33443 3789999998 9999999999999999999964
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=5.7e-27 Score=215.54 Aligned_cols=270 Identities=17% Similarity=0.229 Sum_probs=162.9
Q ss_pred ccccCCEEEEEEEccC-C-CCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 19 ALNDNGIKIFYRTYGR-G-PTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~-~-~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
++++++.++.|...+. + +++|||+||++++... |..+...+.. .||+|+++|+||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~----------------------~g~~vi~~d~~G 63 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKE----------------------EGREVIMYDQLG 63 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHh----------------------cCCEEEEEcCCC
Confidence 4677888889988774 3 5679999998666544 5555555554 389999999999
Q ss_pred CCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 96 MGRSSVPVKKT-EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 96 ~G~S~~~~~~~-~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
||.|..+.... .++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++.... +....
T Consensus 64 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~----~~~~~- 138 (288)
T TIGR01250 64 CGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSA----PEYVK- 138 (288)
T ss_pred CCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccc----hHHHH-
Confidence 99998654322 3789999999999999999999999999999999999999999999999999875311 10000
Q ss_pred HHHHHHHHhhccChhhhhccCccccc-CH---hHHHhhh----CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHY-SQ---EYLEEYV----GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
........+................+ .. ....... ..........................+... ... ..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 216 (288)
T TIGR01250 139 ELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNE-FTI-TG 216 (288)
T ss_pred HHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcc-ccc-cc
Confidence 00000000000000000000000000 00 0000000 000000000000000000000000000000 000 00
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.....+..+.+.++++|+++++|++|.+ +++..+.+.+.+ ++++++++++ ||+++.|+|+++++.|.+|++
T Consensus 217 ~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 217 NLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELI-AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhc-cCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 0011123356678899999999999985 567888888876 8889999997 999999999999999999984
No 33
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=2.9e-27 Score=211.02 Aligned_cols=273 Identities=22% Similarity=0.219 Sum_probs=169.9
Q ss_pred CCEEEEEEEcc---CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 23 NGIKIFYRTYG---RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 23 ~g~~i~y~~~G---~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
++..++..+.. .+.+++|||||+|++...|..-++.|++ .++|+++|++|+|+|
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-----------------------~~~vyaiDllG~G~S 130 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-----------------------IRNVYAIDLLGFGRS 130 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-----------------------cCceEEecccCCCCC
Confidence 44444444433 3456799999999999999999999998 899999999999999
Q ss_pred CCCCCCCCC--CHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC-cc----ch
Q 015550 100 SVPVKKTEY--TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC-PK----LD 172 (405)
Q Consensus 100 ~~~~~~~~~--~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~----~~ 172 (405)
++|.-..+. ..+.+++-++++....++.+.+|+|||+||++|..||.+||++|+.|||++|.+....+. .. ..
T Consensus 131 SRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~ 210 (365)
T KOG4409|consen 131 SRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPP 210 (365)
T ss_pred CCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCC
Confidence 988753332 345788999999999999999999999999999999999999999999999987655331 11 11
Q ss_pred hHHHHHHHHHhhccChhh--hhccCcccccCHhHHHhhhCCC--chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 173 LQTLSIAIRFFRAKTPEK--RAAVDLDTHYSQEYLEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
...............+.. +..-.+.......+....+... ...+....+|.-............+...+..+- -
T Consensus 211 ~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g--~ 288 (365)
T KOG4409|consen 211 PEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGG--W 288 (365)
T ss_pred hHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccc--h
Confidence 111111111122222211 1111111111111111111111 111111222332222222111111111111100 0
Q ss_pred cChhhhhhhhhcC--CcEEEEeecCCccCCHHHHHHHHHHh-CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 249 MTQKDIQTIRSAG--FLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 249 ~~~~~~~~l~~i~--~Pvlvi~G~~D~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
.....+..+..++ |||++|+|++|.+- .....++.+.+ ...++.+++++ ||+++.++|+.+++.|.++++..
T Consensus 289 Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 289 ARRPMIQRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hhhhHHHHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 1122234455555 99999999999864 44555555543 35589999998 99999999999999999998753
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.95 E-value=1.2e-26 Score=208.25 Aligned_cols=241 Identities=21% Similarity=0.251 Sum_probs=155.4
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
|+|||+||++++...|.++++.|.. ||+|+++|+||+|.|+.+.....+++++++++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~-----------------------~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 58 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGP-----------------------HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQD 58 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcc-----------------------cCeEEEEcCCCCCCCCCCCccChhhHHHHHHH
Confidence 6799999999999999999999986 99999999999999987655457789999999
Q ss_pred -HHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh-HHHHHHHHHhhccChhhhhcc
Q 015550 117 -VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL-QTLSIAIRFFRAKTPEKRAAV 194 (405)
Q Consensus 117 -l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 194 (405)
+..+++.++.++++++||||||.+++.+|.++|++|++++++++............. .........+.....
T Consensus 59 ~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 132 (251)
T TIGR03695 59 ILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGL------ 132 (251)
T ss_pred HHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCc------
Confidence 788889998899999999999999999999999999999999876321110000000 000000000000000
Q ss_pred CcccccCHhHHHhhh-----CC-CchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 195 DLDTHYSQEYLEEYV-----GS-STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 195 ~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
..+...+. .. ..........+....... ........+.. .......+..+.+..+++|+++|+
T Consensus 133 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~l~i~ 201 (251)
T TIGR03695 133 -------EAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN---NPEGLAKMLRA-TGLGKQPSLWPKLQALTIPVLYLC 201 (251)
T ss_pred -------cHHHHHHhcCceeeecccCChHHhHHHHHhcccc---cchHHHHHHHH-hhhhcccchHHHhhCCCCceEEEe
Confidence 00000000 00 000000001111100000 00000000000 000011223345678899999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
|++|..++ +..+.+.+.+ ++++++++++ ||++++++|+++++.|.+|++
T Consensus 202 g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 202 GEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred eCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 99998764 5667777765 8899999998 999999999999999999983
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.95 E-value=5.2e-26 Score=218.00 Aligned_cols=255 Identities=28% Similarity=0.371 Sum_probs=167.8
Q ss_pred cccccCCEEEEEEEccCC-CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 18 AALNDNGIKIFYRTYGRG-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~-~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
..+..++.+++|...|++ .++|||+||++++...|..+...|.. +|+|+++|+|||
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~g~ 168 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAA-----------------------GRPVIALDLPGH 168 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhc-----------------------CCEEEEEcCCCC
Confidence 346778889999998863 56899999999999999999999987 799999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
|.|..... ..+++++++++.++++.++.++++++||||||.+++.+|..+|+++.++|++++........ ....
T Consensus 169 G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~----~~~~ 242 (371)
T PRK14875 169 GASSKAVG--AGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN----GDYI 242 (371)
T ss_pred CCCCCCCC--CCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc----hhHH
Confidence 99965443 67899999999999999999999999999999999999999999999999998764221110 0000
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhh-cccChhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWM-HKMTQKDI 254 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 254 (405)
. .+......... ...+...+... .........+.......... ..+......... .....+..
T Consensus 243 ~---~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 307 (371)
T PRK14875 243 D---GFVAAESRREL----------KPVLELLFADPALVTRQMVEDLLKYKRLDGVD--DALRALADALFAGGRQRVDLR 307 (371)
T ss_pred H---HhhcccchhHH----------HHHHHHHhcChhhCCHHHHHHHHHHhccccHH--HHHHHHHHHhccCcccchhHH
Confidence 0 00000000000 00000000000 00000000000000000000 000000000000 00112333
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..+.+++||+|+++|++|.++|++..+. +.++.++.++++ ||++++++|+++++.|.+|+++
T Consensus 308 ~~l~~i~~Pvlii~g~~D~~vp~~~~~~----l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 308 DRLASLAIPVLVIWGEQDRIIPAAHAQG----LPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred HHHhcCCCCEEEEEECCCCccCHHHHhh----ccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 4567889999999999999999876654 335688999997 9999999999999999999975
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.95 E-value=6.9e-26 Score=211.15 Aligned_cols=268 Identities=19% Similarity=0.211 Sum_probs=157.4
Q ss_pred cccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 20 LNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
...+|.+|+|.+.|+ +.++|||+||++++...+ .+...+.. .+|+|+++|+||||.
T Consensus 10 ~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~----------------------~~~~vi~~D~~G~G~ 66 (306)
T TIGR01249 10 NVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDP----------------------ETYRIVLFDQRGCGK 66 (306)
T ss_pred EcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCc----------------------cCCEEEEECCCCCCC
Confidence 444689999999986 345799999988776543 33344433 389999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH--
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL-- 176 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-- 176 (405)
|+.+.....++.+++++|+..++++++.++++++||||||.+++.++.++|++|+++|++++................
T Consensus 67 S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 146 (306)
T TIGR01249 67 STPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASM 146 (306)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhh
Confidence 986543335678899999999999999999999999999999999999999999999999876321100000000000
Q ss_pred ---HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchh-HHHHHHHHh----hhhhcc---ccCccc--chhhhHH
Q 015550 177 ---SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRR-AILYQEYVK----GISATG---MQSNYG--FDGQIHA 243 (405)
Q Consensus 177 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~---~~~~~~--~~~~~~~ 243 (405)
.....+........+ ...+...+...+....... ....+.+.. .+.... ...... ....+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (306)
T TIGR01249 147 IYPDAWQRFMDSIPENER-----NEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFAR 221 (306)
T ss_pred hCHHHHHHHhhhCChhhh-----hccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHH
Confidence 000000000000000 0011112222222221110 011111110 000000 000000 0000000
Q ss_pred ---hh--hccc---Chhhhhhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHH
Q 015550 244 ---CW--MHKM---TQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 244 ---~~--~~~~---~~~~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
.+ .... .......+.++ ++|+|+|+|++|.++|.+.++.+++.+ ++++++++++ ||.++.+ +..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~---~~~~~ 297 (306)
T TIGR01249 222 LENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF-PEAELKVTNNAGHSAFDP---NNLAA 297 (306)
T ss_pred HHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCCCh---HHHHH
Confidence 00 0000 11123455666 699999999999999999999999987 8899999997 9998643 34455
Q ss_pred HHHHHH
Q 015550 314 LIDLIK 319 (405)
Q Consensus 314 i~~fl~ 319 (405)
|.+|+.
T Consensus 298 i~~~~~ 303 (306)
T TIGR01249 298 LVHALE 303 (306)
T ss_pred HHHHHH
Confidence 555554
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=1.7e-25 Score=215.09 Aligned_cols=270 Identities=19% Similarity=0.216 Sum_probs=160.3
Q ss_pred EEEEEEcc-C-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC
Q 015550 26 KIFYRTYG-R-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (405)
Q Consensus 26 ~i~y~~~G-~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~ 103 (405)
++++.... + ++|+|||+||++++...|...+..|.+ +|+|+++|+||||.|+.+.
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~rG~G~S~~~~ 149 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALAS-----------------------RFRVIAIDQLGWGGSSRPD 149 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHh-----------------------CCEEEEECCCCCCCCCCCC
Confidence 55544432 2 447899999999999999999999987 8999999999999998654
Q ss_pred CCCCCCH----HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH-----
Q 015550 104 KKTEYTT----KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ----- 174 (405)
Q Consensus 104 ~~~~~~~----~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----- 174 (405)
.. ..+. +.+++++.++++.++.++++++||||||.+|+.+|.++|++|+++|++++.+............
T Consensus 150 ~~-~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 228 (402)
T PLN02894 150 FT-CKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRA 228 (402)
T ss_pred cc-cccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcch
Confidence 21 1121 2356778888888999999999999999999999999999999999999875332211100000
Q ss_pred HH-HHHHHHh--hccChhhhhcc--CcccccCHhHHHhhhCCC-------chhHHHHHHHHhhhhhccccCcccchhhhH
Q 015550 175 TL-SIAIRFF--RAKTPEKRAAV--DLDTHYSQEYLEEYVGSS-------TRRAILYQEYVKGISATGMQSNYGFDGQIH 242 (405)
Q Consensus 175 ~~-~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
.+ ......+ ....+...... .........+....+... .........+...... ..... ...+.
T Consensus 229 ~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~-~~~~~ 304 (402)
T PLN02894 229 TWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLA---AKASG-ELCLK 304 (402)
T ss_pred hHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhc---CCCch-HHHHH
Confidence 00 0000000 00011100000 000000001111110000 0000111111110000 00000 00000
Q ss_pred Hhh--hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 243 ACW--MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 243 ~~~--~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
... ......+....+..+++|+++|+|++|.+.+ .....+.+...+.++++++++ ||+++.|+|++|++.|.+|++
T Consensus 305 ~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~ 383 (402)
T PLN02894 305 YIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACR 383 (402)
T ss_pred HhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHH
Confidence 000 0001223345677889999999999998876 555556665545689999998 999999999999999999999
Q ss_pred hhcCC
Q 015550 320 ASEKK 324 (405)
Q Consensus 320 ~~~~~ 324 (405)
.....
T Consensus 384 ~~~~~ 388 (402)
T PLN02894 384 KYLSP 388 (402)
T ss_pred HhccC
Confidence 88765
No 38
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=4.7e-25 Score=209.59 Aligned_cols=282 Identities=15% Similarity=0.134 Sum_probs=173.3
Q ss_pred ccCCEEEEEEEccC----CCCeEEEEecCCCCCCch---------hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE
Q 015550 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAW---------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (405)
Q Consensus 21 ~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~---------~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 87 (405)
.+..++|.|+++|. +.+.||++|++.+++..- .-+...|.....++|+ ..|.
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt---------------~~yf 101 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDT---------------NKYF 101 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCC---------------CceE
Confidence 45778999999996 346899999998865321 1123445455556666 4899
Q ss_pred EEEecCCCCCCCCCC-----------C--------CCCCCCHHHHHHHHHHHHHHhCCccEE-EEEEChhHHHHHHHHHh
Q 015550 88 VCAFDNRGMGRSSVP-----------V--------KKTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAM 147 (405)
Q Consensus 88 Vi~~D~~G~G~S~~~-----------~--------~~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~ 147 (405)
||++|..|-|.|+.| + ....++++++++++..+++++++++++ ++||||||++|+.+|.+
T Consensus 102 vi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~ 181 (389)
T PRK06765 102 VISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVH 181 (389)
T ss_pred EEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHH
Confidence 999999998764322 1 112479999999999999999999987 99999999999999999
Q ss_pred CCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc------------Chh----hhhccCcccccCHhHHHhhhCC
Q 015550 148 VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK------------TPE----KRAAVDLDTHYSQEYLEEYVGS 211 (405)
Q Consensus 148 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~~~~~~~~ 211 (405)
+|++|+++|++++..... +.............+... .+. .............+++...+..
T Consensus 182 ~P~~v~~lv~ia~~~~~~---~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r 258 (389)
T PRK06765 182 YPHMVERMIGVIGNPQND---AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPR 258 (389)
T ss_pred ChHhhheEEEEecCCCCC---hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCc
Confidence 999999999998763211 000000111111111110 000 0000000111122222222111
Q ss_pred Cc----------hhHHHHHHHHhhhhhc--cccCcccchhhhHHhhhcc---cChhhhhhhhhcCCcEEEEeecCCccCC
Q 015550 212 ST----------RRAILYQEYVKGISAT--GMQSNYGFDGQIHACWMHK---MTQKDIQTIRSAGFLVSVIHGRHDVIAQ 276 (405)
Q Consensus 212 ~~----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~Pvlvi~G~~D~~~~ 276 (405)
.. ......+.|....... .......+......+-.+. ...+..+.+..+++|+|+|+|++|.++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p 338 (389)
T PRK06765 259 NASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQP 338 (389)
T ss_pred CccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCC
Confidence 10 0000112222221110 0000111111111111111 1113456788899999999999999999
Q ss_pred HHHHHHHHHHhC---CCeEEEEcC-C-CccccccCHHHHHHHHHHHHHh
Q 015550 277 ICYARRLAEKLY---PVARMIDLP-G-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 277 ~~~~~~l~~~l~---~~~~l~~~~-g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
++..+++++.+. +++++++++ + ||+.++++|+++++.|.+||++
T Consensus 339 ~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 339 PRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 999999998873 378999997 4 9999999999999999999965
No 39
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.94 E-value=1.5e-25 Score=246.24 Aligned_cols=259 Identities=17% Similarity=0.263 Sum_probs=166.9
Q ss_pred EEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC
Q 015550 27 IFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (405)
Q Consensus 27 i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~ 104 (405)
++|...|+ ++++|||+||++++...|.++++.|.+ +|+|+++|+||||.|..+..
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-----------------------~~rVi~~Dl~G~G~S~~~~~ 1416 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-----------------------SARCISIDLPGHGGSKIQNH 1416 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEcCCCCCCCCCccc
Confidence 55666675 346899999999999999999999987 89999999999999975431
Q ss_pred ------CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHH
Q 015550 105 ------KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (405)
Q Consensus 105 ------~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (405)
...++++++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+.... .....
T Consensus 1417 ~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~-------~~~~~ 1489 (1655)
T PLN02980 1417 AKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKD-------EVARK 1489 (1655)
T ss_pred cccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCc-------hHHHH
Confidence 23578999999999999999999999999999999999999999999999999987532110 00000
Q ss_pred HHHHhhccChhhhhccCcccccCHhHHHhhhCCC-----chhHHHHHHHHh-hhhhccccCcccchhhhHHhhhcccChh
Q 015550 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-----TRRAILYQEYVK-GISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
...... ........ ......+...++... ..... ...... .+.... ...+...+.. +......+
T Consensus 1490 ~~~~~~---~~~~~~l~--~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~-~~~~~~~d 1559 (1655)
T PLN02980 1490 IRSAKD---DSRARMLI--DHGLEIFLENWYSGELWKSLRNHPH-FNKIVASRLLHKD---VPSLAKLLSD-LSIGRQPS 1559 (1655)
T ss_pred HHhhhh---hHHHHHHH--hhhHHHHHHHhccHHHhhhhccCHH-HHHHHHHHHhcCC---HHHHHHHHHH-hhhcccch
Confidence 000000 00000000 000000111111000 00000 001110 000000 0000000100 00011123
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC------------eEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV------------ARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~------------~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
..+.+.++++|+|+|+|++|.+++ +.++++.+.+ ++ ++++++++ ||++++|+|+++++.|.+||+
T Consensus 1560 l~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i-~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~ 1637 (1655)
T PLN02980 1560 LWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREI-GKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLT 1637 (1655)
T ss_pred HHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHc-cccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHH
Confidence 346688899999999999999875 6677777766 33 58999998 999999999999999999999
Q ss_pred hhcCCCCC
Q 015550 320 ASEKKISP 327 (405)
Q Consensus 320 ~~~~~~~~ 327 (405)
+......+
T Consensus 1638 ~~~~~~~~ 1645 (1655)
T PLN02980 1638 RLHNSSTP 1645 (1655)
T ss_pred hccccCCC
Confidence 87755444
No 40
>PRK05855 short chain dehydrogenase; Validated
Probab=99.94 E-value=3.2e-26 Score=232.41 Aligned_cols=273 Identities=16% Similarity=0.213 Sum_probs=165.8
Q ss_pred cccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.++..+|.+|+|..+|+ +.|+|||+||++++...|.++++.|.+ +|+|+++|+|||
T Consensus 6 ~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~Vi~~D~~G~ 62 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLAD-----------------------RFRVVAYDVRGA 62 (582)
T ss_pred EEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhc-----------------------ceEEEEecCCCC
Confidence 34677999999999996 457899999999999999999999965 999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcc-EEEEEEChhHHHHHHHHHh--CCcccceEEEeccCCCCCC------C
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTGGGFQ------C 167 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~------~ 167 (405)
|.|+.+.....++++++++|+.+++++++..+ ++|+||||||.+++.++.+ .++++..++.++++..... .
T Consensus 63 G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 142 (582)
T PRK05855 63 GRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSG 142 (582)
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhc
Confidence 99987654457899999999999999998765 9999999999999888876 2445555555543210000 0
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhcccc---Cc---ccchhhh
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ---SN---YGFDGQI 241 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~ 241 (405)
.................. .................... ...... ...+........ .. .......
T Consensus 143 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (582)
T PRK05855 143 LRRPTPRRLARALGQLLR---SWYIYLFHLPVLPELLWRLG-----LGRAWP-RLLRRVEGTPVDPIPTQTTLSDGAHGV 213 (582)
T ss_pred ccccchhhhhHHHHHHhh---hHHHHHHhCCCCcHHHhccc-----hhhHHH-HhhhhccCCCcchhhhhhhhccccchH
Confidence 000000000000000000 00000000000000000000 000000 000000000000 00 0000000
Q ss_pred HHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 242 HACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..+............+..+++|+++|+|++|.++|+...+.+.+.+ ++.+++++++||+++.|+|+++++.|.+|+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 214 KLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWV-PRLWRREIKAGHWLPMSHPQVLAAAVAEFVDAV 292 (582)
T ss_pred HHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccC-CcceEEEccCCCcchhhChhHHHHHHHHHHHhc
Confidence 0000000000111123457899999999999999999999988765 788888888899999999999999999999886
Q ss_pred cC
Q 015550 322 EK 323 (405)
Q Consensus 322 ~~ 323 (405)
..
T Consensus 293 ~~ 294 (582)
T PRK05855 293 EG 294 (582)
T ss_pred cC
Confidence 53
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=7.1e-25 Score=209.23 Aligned_cols=259 Identities=19% Similarity=0.211 Sum_probs=164.2
Q ss_pred ccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 21 ~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
..++..++|..+.+ .+++||++||++++...|..+++.|.+ +||+|+++|+|||
T Consensus 117 ~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~----------------------~Gy~V~~~D~rGh 174 (395)
T PLN02652 117 GARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTS----------------------CGFGVYAMDWIGH 174 (395)
T ss_pred CCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHH----------------------CCCEEEEeCCCCC
Confidence 34567788887755 335799999999998889999999987 4999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ccEEEEEEChhHHHHHHHHHhCCc---ccceEEEeccCCCCCCCCc
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~ 169 (405)
|.|+.... ...+.+.+++|+.++++.+.. .+++++||||||.+++.++. +|+ +|+++|+.+|........+
T Consensus 175 G~S~~~~~-~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~ 252 (395)
T PLN02652 175 GGSDGLHG-YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP 252 (395)
T ss_pred CCCCCCCC-CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH
Confidence 99986543 345788899999999998753 37999999999999998764 564 8999999987632111000
Q ss_pred cchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
.............+... .... .. ...............+...+. .. +.............
T Consensus 253 -----~~~~~~~l~~~~~p~~~----~~~~-~~----~~~~~s~~~~~~~~~~~dp~~----~~--g~i~~~~~~~~~~~ 312 (395)
T PLN02652 253 -----IVGAVAPIFSLVAPRFQ----FKGA-NK----RGIPVSRDPAALLAKYSDPLV----YT--GPIRVRTGHEILRI 312 (395)
T ss_pred -----HHHHHHHHHHHhCCCCc----ccCc-cc----ccCCcCCCHHHHHHHhcCCCc----cc--CCchHHHHHHHHHH
Confidence 00001011100000000 0000 00 000000001111111110000 00 00000000000001
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHHhhcC
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKASEK 323 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~~~~~ 323 (405)
.....+.+.++++|+|++||++|.++|++.++++++++. ++++++++++ +|.++.| +++++.+.|.+||.....
T Consensus 313 ~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 313 SSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 112234567889999999999999999999999999863 3578999999 8999887 799999999999987653
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=6.3e-25 Score=201.84 Aligned_cols=273 Identities=20% Similarity=0.234 Sum_probs=176.1
Q ss_pred CCCCcccccCCEEEEEEEccCC-C--CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 14 AAPDAALNDNGIKIFYRTYGRG-P--TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 14 ~~~~~~~~~~g~~i~y~~~G~~-~--p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.....+...+|..++|..+-.. + .+||++||++.+...|..++..|.. +||.|++
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~----------------------~G~~V~~ 66 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAA----------------------RGFDVYA 66 (298)
T ss_pred cccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHh----------------------CCCEEEE
Confidence 3456668889999999988753 2 4799999999999999999999998 5999999
Q ss_pred ecCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhC----CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 91 FDNRGMGRSSV-PVKKTEYTTKIMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 91 ~D~~G~G~S~~-~~~~~~~~~~~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
+|+||||.|.. ... ..-++.++.+|+.++++... ..+++++||||||.|++.++.+++.+|+++||.+|.....
T Consensus 67 ~D~RGhG~S~r~~rg-~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 67 LDLRGHGRSPRGQRG-HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred ecCCCCCCCCCCCcC-CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC
Confidence 99999999973 332 34458999999999999885 3589999999999999999999999999999999874222
Q ss_pred CCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
. ....... ................... .. ..........+.....+.|.+.-. ..........+..+.
T Consensus 146 ~---~~~~~~~---~~~~~~~~~~~~p~~~~~~--~~-~~~~~~~~~sr~~~~~~~~~~dP~---~~~~~~~~~w~~~~~ 213 (298)
T COG2267 146 G---AILRLIL---ARLALKLLGRIRPKLPVDS--NL-LEGVLTDDLSRDPAEVAAYEADPL---IGVGGPVSRWVDLAL 213 (298)
T ss_pred h---hHHHHHH---HHHhcccccccccccccCc--cc-ccCcCcchhhcCHHHHHHHhcCCc---cccCCccHHHHHHHH
Confidence 1 0001011 0110000000000000000 00 000001111112222222221110 000000111111111
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCC-HHHHHHHHHHh-CCCeEEEEcCC-Ccccccc-CH--HHHHHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ-ICYARRLAEKL-YPVARMIDLPG-GHLVSHE-RT--EEVNQALIDLIK 319 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~-~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e-~p--~~v~~~i~~fl~ 319 (405)
... ..........+++|+|+++|++|.+++ .+...++.+++ .+++++++++| .|.++.| .. +++.+.+.+|+.
T Consensus 214 ~a~-~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~ 292 (298)
T COG2267 214 LAG-RVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLA 292 (298)
T ss_pred Hhh-cccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHH
Confidence 100 012233356678999999999999999 68888887776 46689999999 8999887 45 789999999998
Q ss_pred hhc
Q 015550 320 ASE 322 (405)
Q Consensus 320 ~~~ 322 (405)
+..
T Consensus 293 ~~~ 295 (298)
T COG2267 293 EAL 295 (298)
T ss_pred hhc
Confidence 765
No 43
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=1.6e-24 Score=189.98 Aligned_cols=266 Identities=20% Similarity=0.200 Sum_probs=178.1
Q ss_pred CCcccccCCEEEEEEEccC-C--CC--eEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 16 PDAALNDNGIKIFYRTYGR-G--PT--KVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~-~--~p--~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
...+.+.+|.++++..+-+ . +| .|+++||++... ..|..++..|+. .||.|+
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~----------------------~g~~v~ 86 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAK----------------------SGFAVY 86 (313)
T ss_pred eeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHh----------------------CCCeEE
Confidence 3445677899999988865 1 23 699999999876 678889999988 499999
Q ss_pred EecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
++|++|||.|++... ..-+++..++|+.+..+... ..+..++||||||.|++.++.+.|+..+++|+++|.+.
T Consensus 87 a~D~~GhG~SdGl~~-yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 87 AIDYEGHGRSDGLHA-YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred EeeccCCCcCCCCcc-cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 999999999996654 45688999999999998752 24799999999999999999999999999999999875
Q ss_pred CCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHH
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
..+..+.. .........+....|..+. ... .......+.+...+...... .....+..+.-..
T Consensus 166 i~~~~kp~--p~v~~~l~~l~~liP~wk~-vp~-----~d~~~~~~kdp~~r~~~~~n---------pl~y~g~pRl~T~ 228 (313)
T KOG1455|consen 166 ISEDTKPH--PPVISILTLLSKLIPTWKI-VPT-----KDIIDVAFKDPEKRKILRSD---------PLCYTGKPRLKTA 228 (313)
T ss_pred cCCccCCC--cHHHHHHHHHHHhCCceee-cCC-----ccccccccCCHHHHHHhhcC---------CceecCCccHHHH
Confidence 44433211 1111122222222222221 100 00111111111111111100 0000011111111
Q ss_pred hhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh-CCCeEEEEcCC-Cccccc----cCHHHHHHHHHHH
Q 015550 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSH----ERTEEVNQALIDL 317 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~----e~p~~v~~~i~~f 317 (405)
+-......+....+.++++|++|+||+.|.++.++.++.+++.. ..+.++..+|| -|.++. |+.+.|...|.+|
T Consensus 229 ~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~W 308 (313)
T KOG1455|consen 229 YELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISW 308 (313)
T ss_pred HHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHH
Confidence 11112234556778899999999999999999999999999987 46789999999 898875 3556778888889
Q ss_pred HHhh
Q 015550 318 IKAS 321 (405)
Q Consensus 318 l~~~ 321 (405)
|++.
T Consensus 309 l~~r 312 (313)
T KOG1455|consen 309 LDER 312 (313)
T ss_pred HHhc
Confidence 8763
No 44
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.93 E-value=2.5e-25 Score=182.28 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=176.6
Q ss_pred CcccccCCEEEEEEEccCCCCeEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+..+.++|.+|.|..+|.|+.-||+++|.-++. ..|.+++..|.+.+ .+.++++|.||
T Consensus 23 e~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l---------------------~~TivawDPpG 81 (277)
T KOG2984|consen 23 ESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPL---------------------QVTIVAWDPPG 81 (277)
T ss_pred hheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCC---------------------ceEEEEECCCC
Confidence 445788999999999999998899999987665 57999999888742 59999999999
Q ss_pred CCCCCCCCCCCCC-CHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 96 MGRSSVPVKKTEY-TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 96 ~G~S~~~~~~~~~-~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
+|.|..|..+... -+..-+++...+++.|..+++.++|||-||..|+..|+++++.|.++|+.+...--. .......+
T Consensus 82 YG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn-~~~~ma~k 160 (277)
T KOG2984|consen 82 YGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVN-HLGAMAFK 160 (277)
T ss_pred CCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceec-chhHHHHh
Confidence 9999877653222 234456677788899999999999999999999999999999999999998752100 00000111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
.+.....+.. +.......+|..+++... ...+++.+..-..... ..-..
T Consensus 161 giRdv~kWs~------r~R~P~e~~Yg~e~f~~~----------wa~wvD~v~qf~~~~d---------------G~fCr 209 (277)
T KOG2984|consen 161 GIRDVNKWSA------RGRQPYEDHYGPETFRTQ----------WAAWVDVVDQFHSFCD---------------GRFCR 209 (277)
T ss_pred chHHHhhhhh------hhcchHHHhcCHHHHHHH----------HHHHHHHHHHHhhcCC---------------CchHh
Confidence 1111111111 111112233333333321 2233332221111100 01112
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..+.+++||+||+||+.|++++..++..+.... +.+++.+.+. +|.+++.-+++++..+.+||+..
T Consensus 210 ~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~-~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 210 LVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK-SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hhcccccCCeeEeeCCcCCCCCCCCccchhhhc-ccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 346789999999999999999998888888865 8899999985 99999999999999999999864
No 45
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=1.3e-23 Score=175.49 Aligned_cols=221 Identities=19% Similarity=0.212 Sum_probs=153.3
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
..||||||+.|+....+.+.+.|.+ +||.|.++.+||||.....- -..+.++|.+|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e----------------------~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~ 71 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNE----------------------NGYTVYAPRYPGHGTLPEDF--LKTTPRDWWED 71 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHH----------------------CCceEecCCCCCCCCCHHHH--hcCCHHHHHHH
Confidence 4699999999999999999999998 59999999999999885322 25678888888
Q ss_pred HHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhc
Q 015550 117 VIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (405)
Q Consensus 117 l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (405)
+.+..++| +.+.|.++|-||||.+|+.+|..+| ++++|.++++..... ....+.....+...
T Consensus 72 v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~-----~~~iie~~l~y~~~-------- 136 (243)
T COG1647 72 VEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKS-----WRIIIEGLLEYFRN-------- 136 (243)
T ss_pred HHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCccccc-----chhhhHHHHHHHHH--------
Confidence 87776665 6789999999999999999999998 999999998742211 11111111111100
Q ss_pred cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCc
Q 015550 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273 (405)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~ 273 (405)
+-.-............+.+..+.. .+... ...+..+....+..|..|++++.|++|.
T Consensus 137 --------------~kk~e~k~~e~~~~e~~~~~~~~~-------~~~~~--~~~~i~~~~~~~~~I~~pt~vvq~~~D~ 193 (243)
T COG1647 137 --------------AKKYEGKDQEQIDKEMKSYKDTPM-------TTTAQ--LKKLIKDARRSLDKIYSPTLVVQGRQDE 193 (243)
T ss_pred --------------hhhccCCCHHHHHHHHHHhhcchH-------HHHHH--HHHHHHHHHhhhhhcccchhheecccCC
Confidence 000000000011111111111000 00000 0112234445677888999999999999
Q ss_pred cCCHHHHHHHHHHhC-CCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHH
Q 015550 274 IAQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIK 319 (405)
Q Consensus 274 ~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~ 319 (405)
++|.+.+..+.+... ...++.++++ ||.+..+ ..+.+.+.+..||+
T Consensus 194 mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 194 MVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred CCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 999999999999873 4678999998 9988876 78899999999996
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=4.4e-23 Score=184.13 Aligned_cols=254 Identities=20% Similarity=0.235 Sum_probs=165.4
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
..|+++++||+-++...|+.+.+.|+..+ +..|+++|.|.||.|+... .++.+.++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l---------------------~~~v~~vd~RnHG~Sp~~~---~h~~~~ma 106 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKL---------------------GRDVYAVDVRNHGSSPKIT---VHNYEAMA 106 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccc---------------------cCceEEEecccCCCCcccc---ccCHHHHH
Confidence 45789999999999999999999999853 7799999999999997655 56799999
Q ss_pred HHHHHHHHHhC----CccEEEEEEChhH-HHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChh
Q 015550 115 KDVIALMDHLG----WKQAHVFGHSMGA-MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (405)
Q Consensus 115 ~dl~~~l~~l~----~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (405)
+|+..+++..+ ..+++++|||||| .+++..+...|+.+..+|+++.++.............+..+...-.....
T Consensus 107 ~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~- 185 (315)
T KOG2382|consen 107 EDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGV- 185 (315)
T ss_pred HHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccc-
Confidence 99999999884 5689999999999 78888888999999999999987643332222222222111111111000
Q ss_pred hhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh-hHHhhhcc---cChhhhhhhhhcCCcEE
Q 015550 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ-IHACWMHK---MTQKDIQTIRSAGFLVS 265 (405)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~l~~i~~Pvl 265 (405)
... .....+.+.+...+......+...+.+ ........+.++-. +...+... ......+. .....|||
T Consensus 186 ~~~-----rke~~~~l~~~~~d~~~~~fi~~nl~~--~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvl 257 (315)
T KOG2382|consen 186 SRG-----RKEALKSLIEVGFDNLVRQFILTNLKK--SPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVL 257 (315)
T ss_pred ccc-----HHHHHHHHHHHhcchHHHHHHHHhcCc--CCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-ccccccee
Confidence 000 000001111111111111111111111 11111111111111 11111110 01111222 55678999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 266 vi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+++|.++..++.+.-.++.+.+ |++++++++. ||+++.|+|+++.+.|.+|+.+.+
T Consensus 258 fi~g~~S~fv~~~~~~~~~~~f-p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 258 FIKGLQSKFVPDEHYPRMEKIF-PNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred EEecCCCCCcChhHHHHHHHhc-cchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 9999999999999888888865 9999999995 999999999999999999997754
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.91 E-value=8.7e-23 Score=191.74 Aligned_cols=258 Identities=17% Similarity=0.122 Sum_probs=155.5
Q ss_pred ccCCEEEEEEEccCC--CCeEEEEecCCCCCCc----------------------h----hhhHhhhcCCCCCCCCchhh
Q 015550 21 NDNGIKIFYRTYGRG--PTKVILITGLAGTHDA----------------------W----GPQLKGLAGTDKPNDDDETI 72 (405)
Q Consensus 21 ~~~g~~i~y~~~G~~--~p~vvllHG~~~~~~~----------------------~----~~~~~~L~~~~~~~~~~~~~ 72 (405)
+.+|.+|+++.+.+. +.+|+++||++.+... | ..+++.|.+
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~----------- 72 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK----------- 72 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH-----------
Confidence 458899999888653 3479999999998851 1 356788877
Q ss_pred hccccCCCCCCCCeEEEEecCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhC------------------------C
Q 015550 73 LQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTTKIMAKDVIALMDHLG------------------------W 126 (405)
Q Consensus 73 ~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~--~~~~~~~~~~dl~~~l~~l~------------------------~ 126 (405)
+||.|+++|+||||.|...... ...+++++++|+.++++.+. .
T Consensus 73 -----------~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (332)
T TIGR01607 73 -----------NGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENR 141 (332)
T ss_pred -----------CCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCC
Confidence 5999999999999999854321 12478999999999998642 2
Q ss_pred ccEEEEEEChhHHHHHHHHHhCCc--------ccceEEEeccCCCCCC-CCc--cchhHHHHHHHHHhhccChhhhhccC
Q 015550 127 KQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLNVTGGGFQ-CCP--KLDLQTLSIAIRFFRAKTPEKRAAVD 195 (405)
Q Consensus 127 ~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (405)
.+++++||||||.+++.++..+++ .++++|++++...... ..+ .............+....+.......
T Consensus 142 ~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 221 (332)
T TIGR01607 142 LPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKK 221 (332)
T ss_pred CceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCc
Confidence 479999999999999999876643 5899998887631100 000 00000011111111111111000000
Q ss_pred cccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc--CCcEEEEeecCCc
Q 015550 196 LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA--GFLVSVIHGRHDV 273 (405)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlvi~G~~D~ 273 (405)
......+...+.+..+.. ...+ ... ......... ........+..+ ++|+|+|+|++|.
T Consensus 222 ~~~~~~~~~~~~~~~Dp~-------------~~~~-~~s---~~~~~~l~~--~~~~~~~~~~~i~~~~P~Lii~G~~D~ 282 (332)
T TIGR01607 222 IRYEKSPYVNDIIKFDKF-------------RYDG-GIT---FNLASELIK--ATDTLDCDIDYIPKDIPILFIHSKGDC 282 (332)
T ss_pred cccccChhhhhHHhcCcc-------------ccCC-ccc---HHHHHHHHH--HHHHHHhhHhhCCCCCCEEEEEeCCCC
Confidence 000000000000000000 0000 000 000000000 001111233444 6999999999999
Q ss_pred cCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccC-HHHHHHHHHHHHH
Q 015550 274 IAQICYARRLAEKLY-PVARMIDLPG-GHLVSHER-TEEVNQALIDLIK 319 (405)
Q Consensus 274 ~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~-p~~v~~~i~~fl~ 319 (405)
+++++.++.+++++. ++++++++++ +|.++.|. ++++.+.|.+||+
T Consensus 283 vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 283 VCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred ccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 999999999988763 5789999998 99999884 7899999999985
No 48
>PLN02511 hydrolase
Probab=99.91 E-value=1.2e-23 Score=201.40 Aligned_cols=262 Identities=18% Similarity=0.241 Sum_probs=153.3
Q ss_pred ccCCEEEEEEEc-------cCCCCeEEEEecCCCCCCc-h-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 21 NDNGIKIFYRTY-------GRGPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 21 ~~~g~~i~y~~~-------G~~~p~vvllHG~~~~~~~-~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..||..+.+.-. .+++|+||++||+++++.. | ..++..+.+ +||+|+++
T Consensus 78 ~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~----------------------~g~~vv~~ 135 (388)
T PLN02511 78 TPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARS----------------------KGWRVVVF 135 (388)
T ss_pred CCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH----------------------CCCEEEEE
Confidence 346666664221 1346789999999887654 4 456555544 39999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ccEEEEEEChhHHHHHHHHHhCCcc--cceEEEeccCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPER--VLSLALLNVTGGGF 165 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~ 165 (405)
|+||||.|..... .+....+++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++....
T Consensus 136 d~rG~G~s~~~~~--~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~ 213 (388)
T PLN02511 136 NSRGCADSPVTTP--QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLV 213 (388)
T ss_pred ecCCCCCCCCCCc--CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHH
Confidence 9999999975432 22335677888888888765 5899999999999999999999987 88888887653110
Q ss_pred CCCccchhHHHHH-----HHHHhhccChhhhhc-cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchh
Q 015550 166 QCCPKLDLQTLSI-----AIRFFRAKTPEKRAA-VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (405)
Q Consensus 166 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (405)
........ .+.. ....+.......... ......+.... ...... ..++.+.+... ..++..
T Consensus 214 ~~~~~~~~-~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~fd~~~t~~----~~gf~~ 280 (388)
T PLN02511 214 IADEDFHK-GFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPL---VANAKT-----VRDFDDGLTRV----SFGFKS 280 (388)
T ss_pred HHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHH---HHhCCC-----HHHHHHhhhhh----cCCCCC
Confidence 00000000 0000 000000000000000 00000000000 000000 11111111110 111111
Q ss_pred hhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-CccccccCHHH------HH
Q 015550 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEE------VN 311 (405)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~------v~ 311 (405)
. ..++. ..+....+.++++|+|+|+|++|+++|++.. ...++.. ++++++++++ ||+.++|+|+. ++
T Consensus 281 ~-~~yy~---~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~-p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~ 355 (388)
T PLN02511 281 V-DAYYS---NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN-PNCLLIVTPSGGHLGWVAGPEAPFGAPWTD 355 (388)
T ss_pred H-HHHHH---HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC-CCEEEEECCCcceeccccCCCCCCCCccHH
Confidence 1 11111 0122356788999999999999999998765 3455544 9999999997 99999999876 58
Q ss_pred HHHHHHHHhhcCC
Q 015550 312 QALIDLIKASEKK 324 (405)
Q Consensus 312 ~~i~~fl~~~~~~ 324 (405)
+.+.+||+.....
T Consensus 356 ~~i~~Fl~~~~~~ 368 (388)
T PLN02511 356 PVVMEFLEALEEG 368 (388)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887654
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.88 E-value=4.9e-21 Score=184.34 Aligned_cols=226 Identities=19% Similarity=0.182 Sum_probs=142.3
Q ss_pred CCEEEEEEEc---cC-CCCeEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 23 NGIKIFYRTY---GR-GPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 23 ~g~~i~y~~~---G~-~~p~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
+|..|....+ +. ..|+||++||+.+.. +.|..++..|.+ +||.|+++|+||+|
T Consensus 177 ~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~----------------------~Gy~vl~~D~pG~G 234 (414)
T PRK05077 177 GGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAP----------------------RGIAMLTIDMPSVG 234 (414)
T ss_pred CCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHh----------------------CCCEEEEECCCCCC
Confidence 4545554333 22 235555555655543 578888888887 49999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
.|..... ..+......++.+++... +.++++++||||||.+|+.+|..+|++|+++|++++........+..
T Consensus 235 ~s~~~~~--~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~--- 309 (414)
T PRK05077 235 FSSKWKL--TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKR--- 309 (414)
T ss_pred CCCCCCc--cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhh---
Confidence 9965322 234444555666666554 45789999999999999999999999999999998764211100000
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (405)
.. . .+... ...+...+.... ....+... ...+ ....
T Consensus 310 -~~-------~-~p~~~----------~~~la~~lg~~~~~~~~l~~~-l~~~-----------------------sl~~ 346 (414)
T PRK05077 310 -QQ-------Q-VPEMY----------LDVLASRLGMHDASDEALRVE-LNRY-----------------------SLKV 346 (414)
T ss_pred -hh-------h-chHHH----------HHHHHHHhCCCCCChHHHHHH-hhhc-----------------------cchh
Confidence 00 0 00000 000000000000 00000000 0000 0000
Q ss_pred hhhh-hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 254 IQTI-RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 254 ~~~l-~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
...+ +++++|+|+|+|++|.++|++.++.+.+.. ++.+++++++. ++++.++++.+.|.+||+..
T Consensus 347 ~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~-~~~~l~~i~~~--~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 347 QGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS-ADGKLLEIPFK--PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred hhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC-CCCeEEEccCC--CccCCHHHHHHHHHHHHHHH
Confidence 0111 468899999999999999999999888865 89999999986 45679999999999999864
No 50
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=1.9e-22 Score=179.53 Aligned_cols=219 Identities=24% Similarity=0.288 Sum_probs=132.8
Q ss_pred eEEEEecCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 86 IEVCAFDNRGMGRSSV--PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 86 ~~Vi~~D~~G~G~S~~--~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
|+|+++|+||+|.|+. ......++.+++++++..++++++.++++++||||||++++.+|.++|++|+++|++++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999994 14446889999999999999999999999999999999999999999999999999998520
Q ss_pred CCCCCcc-chhHHHHH--HHHHhhccChh-hhhccC-cccccC--HhHHHhhhCCCchhHHHHHHHHhhhhhccccCccc
Q 015550 164 GFQCCPK-LDLQTLSI--AIRFFRAKTPE-KRAAVD-LDTHYS--QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236 (405)
Q Consensus 164 ~~~~~~~-~~~~~~~~--~~~~~~~~~~~-~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (405)
.+. ........ ........... ...... ...... ....................+.... . ...
T Consensus 81 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~ 150 (230)
T PF00561_consen 81 ----LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFA-E-----TDA 150 (230)
T ss_dssp ----HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC-H-----HHH
T ss_pred ----chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHH-H-----HHH
Confidence 000 00000000 00000000000 000000 000000 0000000000000000001111000 0 000
Q ss_pred chhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHH
Q 015550 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
...............+....+..+++|+++++|++|.++|++....+.+.+ |+.+++++++ ||+.+.+.++++++.|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 151 FDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI-PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS-TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred HhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 000000000111223334566789999999999999999999999988876 9999999998 99999999999999875
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.87 E-value=1e-20 Score=173.22 Aligned_cols=245 Identities=18% Similarity=0.148 Sum_probs=144.1
Q ss_pred cccCCEEEEEEEc---cCCCCeEEEEecCCCC----CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 20 LNDNGIKIFYRTY---GRGPTKVILITGLAGT----HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 20 ~~~~g~~i~y~~~---G~~~p~vvllHG~~~~----~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
+..+|..+.-..+ +..++.||++||+... ...|..+++.|.+ +||+|+++|
T Consensus 7 ~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~----------------------~G~~v~~~D 64 (274)
T TIGR03100 7 FSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAE----------------------AGFPVLRFD 64 (274)
T ss_pred EEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHH----------------------CCCEEEEeC
Confidence 3445555542222 2234568888886642 3345667788876 499999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
+||||.|... ..+.+++.+|+.++++.+ +.++++++||||||.+++.+|.. +.+|+++|++++.......
T Consensus 65 l~G~G~S~~~----~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~ 139 (274)
T TIGR03100 65 YRGMGDSEGE----NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAA 139 (274)
T ss_pred CCCCCCCCCC----CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCccc
Confidence 9999998743 246777888888888877 55789999999999999999865 4689999999976321110
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhc-cccCcccchhhhHHhhh
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISAT-GMQSNYGFDGQIHACWM 246 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 246 (405)
. ............. .. ..++.........-......+...+... .........
T Consensus 140 ~---~~~~~~~~~~~~~-~~--------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 193 (274)
T TIGR03100 140 Q---AASRIRHYYLGQL-LS--------------ADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHG-------- 193 (274)
T ss_pred c---hHHHHHHHHHHHH-hC--------------hHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccc--------
Confidence 0 0000100000000 00 0111111111111111111111110000 000000000
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHH------HHHHHHh-CCCeEEEEcCC-Ccccccc-CHHHHHHHHHHH
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA------RRLAEKL-YPVARMIDLPG-GHLVSHE-RTEEVNQALIDL 317 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~------~~l~~~l-~~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~f 317 (405)
....+....+..+++|+++++|..|...+ ... .++.+.+ .++++++.+++ +|++..+ .++++.+.|.+|
T Consensus 194 -~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~w 271 (274)
T TIGR03100 194 -GLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEW 271 (274)
T ss_pred -hHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHH
Confidence 01223345566778999999999999864 222 4455544 37899999997 9998666 558999999999
Q ss_pred HH
Q 015550 318 IK 319 (405)
Q Consensus 318 l~ 319 (405)
|+
T Consensus 272 L~ 273 (274)
T TIGR03100 272 LR 273 (274)
T ss_pred Hh
Confidence 95
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.87 E-value=1.9e-20 Score=175.75 Aligned_cols=244 Identities=15% Similarity=0.122 Sum_probs=138.9
Q ss_pred CCeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC--CCCCHH
Q 015550 36 PTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTTK 111 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~--~~~~~~ 111 (405)
+|+||++||++++... +..++..|.+ +||+|+++|+||||.+...... .....+
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~ 115 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQK----------------------RGWLGVVMHFRGCSGEPNRLHRIYHSGETE 115 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHH----------------------CCCEEEEEeCCCCCCCccCCcceECCCchH
Confidence 5789999999887654 4567788877 5999999999999987533211 111233
Q ss_pred HHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcc--cceEEEeccCCCCCCCCccchhHHHHHH-HHHhhccCh
Q 015550 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER--VLSLALLNVTGGGFQCCPKLDLQTLSIA-IRFFRAKTP 188 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 188 (405)
+....+..+.++++..+++++||||||.+++.++..+++. +.++|+++++.....+...... ..... .+.+.....
T Consensus 116 D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~-~~~~~~~~~l~~~l~ 194 (324)
T PRK10985 116 DARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQ-GFSRVYQRYLLNLLK 194 (324)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhh-hHHHHHHHHHHHHHH
Confidence 3333333344445667899999999999988888887654 8999999876321100000000 00000 000000000
Q ss_pred hhhhccCcccccCHhHHHhhhCCCc-hhHH-----HHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCC
Q 015550 189 EKRAAVDLDTHYSQEYLEEYVGSST-RRAI-----LYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (405)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (405)
.. ....+..+..... .... ...++.+.+. ....++......+.. .+..+.++++++
T Consensus 195 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~----~~~~g~~~~~~~y~~----~~~~~~l~~i~~ 256 (324)
T PRK10985 195 AN----------AARKLAAYPGTLPINLAQLKSVRRLREFDDLIT----ARIHGFADAIDYYRQ----CSALPLLNQIRK 256 (324)
T ss_pred HH----------HHHHHHhccccccCCHHHHhcCCcHHHHhhhhe----eccCCCCCHHHHHHH----CChHHHHhCCCC
Confidence 00 0000000000000 0000 0111111111 111222222222211 123456788999
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCH-----HHHHHHHHHHHHhh
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT-----EEVNQALIDLIKAS 321 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p-----~~v~~~i~~fl~~~ 321 (405)
|+++|+|++|.+++++....+.+. .++.+++++++ ||+.+++.. .-..+.+.+|++..
T Consensus 257 P~lii~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 257 PTLIIHAKDDPFMTHEVIPKPESL-PPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CEEEEecCCCCCCChhhChHHHHh-CCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999999999998888877654 48899999987 999998742 35667788888654
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.86 E-value=5.1e-20 Score=174.81 Aligned_cols=271 Identities=13% Similarity=0.110 Sum_probs=149.2
Q ss_pred cccCCEEEEEEEcc---CCCCeEEEEecCCCCCCch-----hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 20 LNDNGIKIFYRTYG---RGPTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 20 ~~~~g~~i~y~~~G---~~~p~vvllHG~~~~~~~~-----~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
...+...++..... ..+++||++||+..+...+ ..+++.|.+ +||+|+++
T Consensus 43 ~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~----------------------~G~~V~~~ 100 (350)
T TIGR01836 43 YREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLE----------------------RGQDVYLI 100 (350)
T ss_pred EEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHH----------------------CCCeEEEE
Confidence 44455566554322 1234699999986655443 578888887 59999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHH-HH----HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKD-VI----ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~d-l~----~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
|++|+|.|.. .+++++++.+ +. .+.+..+.++++++||||||++++.++..+|++|+++|+++++.....
T Consensus 101 D~~g~g~s~~-----~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 101 DWGYPDRADR-----YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFET 175 (350)
T ss_pred eCCCCCHHHh-----cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCC
Confidence 9999998753 3456666533 44 444455778999999999999999999999999999999998643211
Q ss_pred CCccchhH-----HHHHHHHHhhccChhhhhc----cCcccccCHhHHHhhhCCCchhHHHHHHHHh---hhhhccccCc
Q 015550 167 CCPKLDLQ-----TLSIAIRFFRAKTPEKRAA----VDLDTHYSQEYLEEYVGSSTRRAILYQEYVK---GISATGMQSN 234 (405)
Q Consensus 167 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 234 (405)
. +..... ................... ......+...+..... ... .......+.. ..........
T Consensus 176 ~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~w~~d~~~~~~ 252 (350)
T TIGR01836 176 P-GNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVD-ILE-DERKVENFLRMEKWIFDSPDQAG 252 (350)
T ss_pred C-CchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHH-hcC-ChHHHHHHHHHHHHhcCCcCccH
Confidence 0 000000 0000000000000000000 0000000000110000 000 0001111110 0000000000
Q ss_pred ccchhhhHHhhhc-ccC------hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCCCccccccC
Q 015550 235 YGFDGQIHACWMH-KMT------QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPGGHLVSHER 306 (405)
Q Consensus 235 ~~~~~~~~~~~~~-~~~------~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~ggH~~~~e~ 306 (405)
..+...+...+.. ... ......+.++++|+++++|++|.++|++.++.+.+.+. ++.+++++++||+.++..
T Consensus 253 ~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 332 (350)
T TIGR01836 253 EAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVS 332 (350)
T ss_pred HHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEEC
Confidence 0000000000000 000 01122366789999999999999999999999999873 356788888999887764
Q ss_pred ---HHHHHHHHHHHHHh
Q 015550 307 ---TEEVNQALIDLIKA 320 (405)
Q Consensus 307 ---p~~v~~~i~~fl~~ 320 (405)
++++.+.|.+||.+
T Consensus 333 ~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 333 GKAQKEVPPAIGKWLQA 349 (350)
T ss_pred chhHhhhhHHHHHHHHh
Confidence 47899999999975
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=4.9e-20 Score=166.60 Aligned_cols=217 Identities=18% Similarity=0.241 Sum_probs=136.8
Q ss_pred cCCEEEEEEEccCC------CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 22 DNGIKIFYRTYGRG------PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 22 ~~g~~i~y~~~G~~------~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
.+|..|.-+..-+. .++||++||++++...+..+++.|.+ +||.|+.||.||
T Consensus 17 ~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~----------------------~G~~vLrfD~rg 74 (307)
T PRK13604 17 ENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSS----------------------NGFHVIRYDSLH 74 (307)
T ss_pred CCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHH----------------------CCCEEEEecCCC
Confidence 46788876555442 25799999999988778999999988 599999999998
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 96 M-GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 96 ~-G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
+ |.|++... ..++....+|+.++++.+ +.+++.|+||||||.+|+..|... .++.+|+.+|... +
T Consensus 75 ~~GeS~G~~~--~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~-------l 143 (307)
T PRK13604 75 HVGLSSGTID--EFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN-------L 143 (307)
T ss_pred CCCCCCCccc--cCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc-------H
Confidence 8 99976443 334444567876666655 456899999999999997777643 4999999988631 1
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc--
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM-- 249 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 249 (405)
. ..+.. .+..... .++.....+.++ +.+ .... ...+... +.....
T Consensus 144 ~-d~l~~---~~~~~~~------~~p~~~lp~~~d-~~g-~~l~---~~~f~~~------------------~~~~~~~~ 190 (307)
T PRK13604 144 R-DTLER---ALGYDYL------SLPIDELPEDLD-FEG-HNLG---SEVFVTD------------------CFKHGWDT 190 (307)
T ss_pred H-HHHHH---hhhcccc------cCcccccccccc-ccc-cccc---HHHHHHH------------------HHhcCccc
Confidence 1 11111 0000000 000000000000 000 0000 0011110 000000
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-Cccccc
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSH 304 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~ 304 (405)
.....+.+..+++|+|+|||++|.++|++.++++.+.+. .+++++.++| +|.+..
T Consensus 191 ~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 191 LDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred cccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 012234566778999999999999999999999999873 5799999999 887743
No 55
>PRK10566 esterase; Provisional
Probab=99.85 E-value=9.4e-20 Score=164.82 Aligned_cols=213 Identities=17% Similarity=0.137 Sum_probs=128.9
Q ss_pred EEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC
Q 015550 27 IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (405)
Q Consensus 27 i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~ 103 (405)
++|...+. ..|+||++||++++...|..+++.|.+ +||.|+++|+||||.+....
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~G~~~~~~ 72 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQ----------------------AGFRVIMPDAPMHGARFSGD 72 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHh----------------------CCCEEEEecCCcccccCCCc
Confidence 55555443 247899999999999889999999987 49999999999999864221
Q ss_pred CCCCCC-----HHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 104 KKTEYT-----TKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 104 ~~~~~~-----~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
.....+ .....+|+.++++.+ +.++++++||||||.+++.++.++|+....++++++.. ..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~--------~~ 144 (249)
T PRK10566 73 EARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY--------FT 144 (249)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH--------HH
Confidence 101110 112234444444432 34689999999999999999999886444444444320 00
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
. ...... .+ .... ...... ....+..... ..+
T Consensus 145 --~---~~~~~~--~~-~~~~-----------------~~~~~~-~~~~~~~~~~----------------------~~~ 176 (249)
T PRK10566 145 --S---LARTLF--PP-LIPE-----------------TAAQQA-EFNNIVAPLA----------------------EWE 176 (249)
T ss_pred --H---HHHHhc--cc-cccc-----------------ccccHH-HHHHHHHHHh----------------------hcC
Confidence 0 000000 00 0000 000000 0011110000 001
Q ss_pred hhhhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHhCC-----CeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 253 DIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYP-----VARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 253 ~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~-----~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
....+.++ ++|+|++||++|.++|++.++++.+.+.. ++++..+++ ||... .+..+.+.+||++.
T Consensus 177 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 177 VTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred hhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 11234454 68999999999999999999999988732 357778898 99864 35678888888753
No 56
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.2e-19 Score=164.24 Aligned_cols=280 Identities=21% Similarity=0.177 Sum_probs=178.6
Q ss_pred ccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhh-------hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGP-------QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 21 ~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~-------~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
.+++..|.|+++|. ....||++||+.+++..... +.+.+....+++|+ ..|.||
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt---------------~r~fvI 96 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDT---------------ERFFVI 96 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCc---------------cceEEE
Confidence 45778999999996 23579999999997765542 66777776777777 489999
Q ss_pred EecCCCCC-CCCCCCC-----------CCCCCHHHHHHHHHHHHHHhCCccEE-EEEEChhHHHHHHHHHhCCcccceEE
Q 015550 90 AFDNRGMG-RSSVPVK-----------KTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLA 156 (405)
Q Consensus 90 ~~D~~G~G-~S~~~~~-----------~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lv 156 (405)
++|..|.+ .|+.|.. ...+++.|+++.-..++++||++++. +||.|||||.|++++..|||+|.++|
T Consensus 97 c~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i 176 (368)
T COG2021 97 CTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAI 176 (368)
T ss_pred EecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhh
Confidence 99999976 4443321 12468889999889999999999987 89999999999999999999999999
Q ss_pred EeccCCCCCCCCccchhHHHHHHHHHhhccChhhh-----------------hccCcccccCHhHHHhhhCCCc------
Q 015550 157 LLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR-----------------AAVDLDTHYSQEYLEEYVGSST------ 213 (405)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~------ 213 (405)
.++++..... ....+....+..-...|... .........+.+.+++.+....
T Consensus 177 ~ia~~~r~s~-----~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~ 251 (368)
T COG2021 177 PIATAARLSA-----QNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLR 251 (368)
T ss_pred eecccccCCH-----HHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccC
Confidence 9998632110 00011111111111111110 0000111222333333333211
Q ss_pred --hhHHHHHHHHhhhhhcccc--CcccchhhhHHhhhccc---ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHH
Q 015550 214 --RRAILYQEYVKGISATGMQ--SNYGFDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEK 286 (405)
Q Consensus 214 --~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~ 286 (405)
......+.|.+.....-.. ....+.....+.-.+.. ..+..+.+..+++|++++.-+.|...|++..+++++.
T Consensus 252 ~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~ 331 (368)
T COG2021 252 GGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEA 331 (368)
T ss_pred CCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHh
Confidence 1122333333332211000 00011111111111111 1334566888999999999999999999999999999
Q ss_pred hCCCeEEEEcCC--CccccccCHHHHHHHHHHHHHh
Q 015550 287 LYPVARMIDLPG--GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 287 l~~~~~l~~~~g--gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+.+...+++++. ||..++...+.+...|..||+.
T Consensus 332 L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 332 LPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred ccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 843333888874 9999999999999999999974
No 57
>PLN02872 triacylglycerol lipase
Probab=99.85 E-value=1.2e-19 Score=172.66 Aligned_cols=278 Identities=17% Similarity=0.160 Sum_probs=160.2
Q ss_pred cccCCEEEEEEEcc--------CCCCeEEEEecCCCCCCchhh------hHhhhcCCCCCCCCchhhhccccCCCCCCCC
Q 015550 20 LNDNGIKIFYRTYG--------RGPTKVILITGLAGTHDAWGP------QLKGLAGTDKPNDDDETILQDSVESGDGGAG 85 (405)
Q Consensus 20 ~~~~g~~i~y~~~G--------~~~p~vvllHG~~~~~~~~~~------~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g 85 (405)
.+-||+.|...... ..+|+|||+||++++++.|.. +...|++ +|
T Consensus 50 ~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~----------------------~G 107 (395)
T PLN02872 50 QTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD----------------------HG 107 (395)
T ss_pred ECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHh----------------------CC
Confidence 46688888876642 124679999999999988842 3334555 59
Q ss_pred eEEEEecCCCCCCCCC-------CCCCCCCCHHHHH-HHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCc---c
Q 015550 86 IEVCAFDNRGMGRSSV-------PVKKTEYTTKIMA-KDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPE---R 151 (405)
Q Consensus 86 ~~Vi~~D~~G~G~S~~-------~~~~~~~~~~~~~-~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~---~ 151 (405)
|+|+++|+||++.|.. +.....+++++++ .|+.++++++ ..++++++||||||.+++.++ .+|+ +
T Consensus 108 ydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~ 186 (395)
T PLN02872 108 FDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEM 186 (395)
T ss_pred CCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHH
Confidence 9999999999886632 1112357888898 7999999987 337999999999999998555 5776 6
Q ss_pred cceEEEeccCCCCCCCCccchhHH----HHHHHHHhhc--c--Ch-hhhhccC---cccccCHhHHHhhhCCC-------
Q 015550 152 VLSLALLNVTGGGFQCCPKLDLQT----LSIAIRFFRA--K--TP-EKRAAVD---LDTHYSQEYLEEYVGSS------- 212 (405)
Q Consensus 152 v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~--~~-~~~~~~~---~~~~~~~~~~~~~~~~~------- 212 (405)
|+.+++++|..........+.... .......+.. . .. ....... .........+..+.+..
T Consensus 187 v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~ 266 (395)
T PLN02872 187 VEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASR 266 (395)
T ss_pred HHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhh
Confidence 888899988743211111111000 0000000000 0 00 0000000 00000001111111100
Q ss_pred ----------chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc--CCcEEEEeecCCccCCHHHH
Q 015550 213 ----------TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA--GFLVSVIHGRHDVIAQICYA 280 (405)
Q Consensus 213 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlvi~G~~D~~~~~~~~ 280 (405)
.........|...+.+ +....+++....+.......... .-.+.++ ++|+++++|++|.+++++.+
T Consensus 267 ~~~~~~~~pagtS~k~~~H~~Q~~~s-~~f~~yDyg~~~n~~~Yg~~~pP-~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv 344 (395)
T PLN02872 267 IDYYLEYEPHPSSVKNLRHLFQMIRK-GTFAHYDYGIFKNLKLYGQVNPP-AFDLSLIPKSLPLWMGYGGTDGLADVTDV 344 (395)
T ss_pred hhHHHhcCCCcchHHHHHHHHHHHhc-CCcccCCCCchhhHHHhCCCCCC-CcCcccCCCCccEEEEEcCCCCCCCHHHH
Confidence 0000111122222222 22222333222222222222221 1224555 68999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCC-Ccc---ccccCHHHHHHHHHHHHHhhc
Q 015550 281 RRLAEKLYPVARMIDLPG-GHL---VSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 281 ~~l~~~l~~~~~l~~~~g-gH~---~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+++.+.+.+..+++.+++ ||. ...+.++++.+.|.+|+++..
T Consensus 345 ~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 345 EHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred HHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 999998844368888998 996 344789999999999998643
No 58
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.84 E-value=1.4e-19 Score=176.92 Aligned_cols=239 Identities=15% Similarity=0.088 Sum_probs=142.4
Q ss_pred CCCeEEEEecCCCCCCchh-----hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCC
Q 015550 35 GPTKVILITGLAGTHDAWG-----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~-----~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~ 109 (405)
.++|||++||+......|+ .+++.|.+ +||+|+++|++|+|.+.......+|.
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~----------------------qGf~V~~iDwrgpg~s~~~~~~ddY~ 244 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVE----------------------QGHTVFVISWRNPDASQADKTFDDYI 244 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHH----------------------CCcEEEEEECCCCCcccccCChhhhH
Confidence 3467999999988888775 68888887 59999999999999986554334565
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEEChhHHHHH----HHHHhC-CcccceEEEeccCCCCCCCCccc----hhHHHHHHH
Q 015550 110 TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC----KLAAMV-PERVLSLALLNVTGGGFQCCPKL----DLQTLSIAI 180 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~ 180 (405)
.+.+.+++..+++.++.++++++||||||.++. .+++.+ |++|++++++++...... ...+ +...+....
T Consensus 245 ~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~-~G~l~~f~~~~~~~~~e 323 (532)
T TIGR01838 245 RDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSD-PGELGVFVDEEIVAGIE 323 (532)
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCC-cchhhhhcCchhHHHHH
Confidence 566777788888888999999999999999852 345555 789999999998743211 1110 000110000
Q ss_pred HHhhc---cChhhhhc----cCcccccCHhHHHhhhCC---------------CchhHHHHHHHHhhhhhccccCcccch
Q 015550 181 RFFRA---KTPEKRAA----VDLDTHYSQEYLEEYVGS---------------STRRAILYQEYVKGISATGMQSNYGFD 238 (405)
Q Consensus 181 ~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (405)
..... ........ ..........++..+... .......+.+|++.+-..+....-
T Consensus 324 ~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G--- 400 (532)
T TIGR01838 324 RQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTG--- 400 (532)
T ss_pred HHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCC---
Confidence 10000 00000000 000000000011111111 011222222332222111110000
Q ss_pred hhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHH
Q 015550 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE 308 (405)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~ 308 (405)
.....+....+..+++|+++|+|++|.++|++.+..+.+.+ ++.+..++++ ||.+++++|.
T Consensus 401 --------~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i-~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 401 --------GLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL-GGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred --------eeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC-CCCEEEEECCCCCchHhhCCC
Confidence 00011223567889999999999999999999999999877 6777778876 9999988764
No 59
>PRK11071 esterase YqiA; Provisional
Probab=99.83 E-value=1.5e-19 Score=155.71 Aligned_cols=185 Identities=14% Similarity=0.123 Sum_probs=123.6
Q ss_pred CeEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 37 TKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
|+||++||++++...|.. +...+.+.. .+|+|+++|+||++ ++.+
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~--------------------~~~~v~~~dl~g~~-------------~~~~ 48 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHH--------------------PDIEMIVPQLPPYP-------------ADAA 48 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhC--------------------CCCeEEeCCCCCCH-------------HHHH
Confidence 579999999999999984 334443310 27999999999984 3588
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhcc
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (405)
+++.+++++++.++++++||||||.+++.+|.++|. ++|++++... ..... ..+..... ... .
T Consensus 49 ~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~--------~~~~~---~~~~~~~~-~~~--~ 111 (190)
T PRK11071 49 ELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR--------PFELL---TDYLGENE-NPY--T 111 (190)
T ss_pred HHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC--------HHHHH---HHhcCCcc-ccc--C
Confidence 899999999999999999999999999999999983 4688887631 01111 11111100 000 0
Q ss_pred CcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCcc
Q 015550 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (405)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~ 274 (405)
......+..++. . ... . ....+. ..+|+++|||++|.+
T Consensus 112 ~~~~~~~~~~~~--------------d----~~~--------------------~---~~~~i~-~~~~v~iihg~~De~ 149 (190)
T PRK11071 112 GQQYVLESRHIY--------------D----LKV--------------------M---QIDPLE-SPDLIWLLQQTGDEV 149 (190)
T ss_pred CCcEEEcHHHHH--------------H----HHh--------------------c---CCccCC-ChhhEEEEEeCCCCc
Confidence 000000011111 0 000 0 011122 567899999999999
Q ss_pred CCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 275 ~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+|++.+.++.+. ++++.++| +|.+ ...+++.+.+.+|++
T Consensus 150 V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 150 LDYRQAVAYYAA----CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CCHHHHHHHHHh----cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 999999999984 35667788 7877 445889999999974
No 60
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.83 E-value=1.1e-18 Score=157.00 Aligned_cols=267 Identities=27% Similarity=0.377 Sum_probs=156.2
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
....+..+.|...+.+.|+++++||++++...|......+... . ..|+|+++|+||||.|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~~~d~~g~g~s 64 (282)
T COG0596 5 LAADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPAL-------------------A-ARYRVIAPDLRGHGRS 64 (282)
T ss_pred ccCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhcc-------------------c-cceEEEEecccCCCCC
Confidence 3446778888888876668999999999999998844444431 0 0299999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc----chhHH
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK----LDLQT 175 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~ 175 (405)
. .. .++...+++++..++++++..+++++||||||.+++.++.++|++++++|++++.......... .....
T Consensus 65 ~-~~---~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 140 (282)
T COG0596 65 D-PA---GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAP 140 (282)
T ss_pred C-cc---cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccc
Confidence 7 11 3455566999999999999989999999999999999999999999999999987431100000 00000
Q ss_pred HHHHHHHhhcc-ChhhhhccCcccccCHhHHHh--hhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 176 LSIAIRFFRAK-TPEKRAAVDLDTHYSQEYLEE--YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 176 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
........... ............ ........ ........................ .... ..........
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~ 212 (282)
T COG0596 141 LAALADLLLGLDAAAFAALLAALG-LLAALAAAARAGLAEALRAPLLGAAAAAFARAAR---ADLA----AALLALLDRD 212 (282)
T ss_pred hhhhhhhhhccchhhhhhhhhccc-ccccccccchhccccccccccchhHhhhhhhhcc---cccc----hhhhcccccc
Confidence 00000000000 000000000000 00000000 000000000000000000000000 0000 0000000002
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC-eEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~-~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.......+++|+++++|++|.+.|......+.+.+ ++ .+++++++ ||+++.++|+++++.+.+|+.
T Consensus 213 ~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 213 LRAALARITVPTLIIHGEDDPVVPAELARRLAAAL-PNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred cchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhC-CCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 23445677899999999999777776666666655 64 88999998 999999999999999888543
No 61
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.80 E-value=4.5e-19 Score=153.01 Aligned_cols=262 Identities=18% Similarity=0.187 Sum_probs=152.7
Q ss_pred cccCCEE--EEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 20 LNDNGIK--IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 20 ~~~~g~~--i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
++++|.. +..+..++ ..|.++++||++.+.-+|..+++.|... ...+|+++|+|
T Consensus 53 v~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~---------------------~~~r~~a~DlR 111 (343)
T KOG2564|consen 53 VSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSK---------------------IRCRCLALDLR 111 (343)
T ss_pred cccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhh---------------------cceeEEEeecc
Confidence 4455544 33333344 4578999999999999999999999874 26788999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHh--CCcccceEEEeccCCCCCCCCc
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~ 169 (405)
|||.+...+. .+.+.+.+++|+.++++.+ ...+++||||||||.||...|.. .|. +.+|+.++.. .
T Consensus 112 gHGeTk~~~e-~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV-------E 182 (343)
T KOG2564|consen 112 GHGETKVENE-DDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV-------E 182 (343)
T ss_pred ccCccccCCh-hhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe-------c
Confidence 9999976665 5799999999999999987 24589999999999999888765 465 8999999976 2
Q ss_pred cchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh---hHHhhh
Q 015550 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ---IHACWM 246 (405)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 246 (405)
......+.....++...+.......+...+..+.-..+.... .+ .......+.... + ..|.+... ...+|.
T Consensus 183 gtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~S--Ar-VsmP~~~~~~~e-G--h~yvwrtdL~kte~YW~ 256 (343)
T KOG2564|consen 183 GTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNRDS--AR-VSMPSQLKQCEE-G--HCYVWRTDLEKTEQYWK 256 (343)
T ss_pred hHHHHHHHHHHHHHhcCCccccchhhHHHHHhcccccccccc--ce-EecchheeeccC-C--CcEEEEeeccccchhHH
Confidence 233344444555554433322211110000000000000000 00 000000000000 0 00000000 011111
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
..+. ......-...+|-++|-...|..-..-.. -+.....++.+++. ||+++.+.|..++..+..|+.++.
T Consensus 257 gWF~-gLS~~Fl~~p~~klLilAg~d~LDkdLti----GQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 257 GWFK-GLSDKFLGLPVPKLLILAGVDRLDKDLTI----GQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred HHHh-hhhhHhhCCCccceeEEecccccCcceee----eeeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 1100 00111223446666666666654221111 11235678999986 999999999999999999998876
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.80 E-value=1.2e-18 Score=143.77 Aligned_cols=144 Identities=31% Similarity=0.410 Sum_probs=113.4
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
+||++||++++...|..+++.|.+ +||.|+.+|+||+|.+.... ..+++.+++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~ 53 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAE----------------------QGYAVVAFDYPGHGDSDGAD-----AVERVLADI 53 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHH----------------------TTEEEEEESCTTSTTSHHSH-----HHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEecCCCCccchhH-----HHHHHHHHH
Confidence 589999999999999999999988 49999999999999883211 222333332
Q ss_pred HHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcc
Q 015550 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLD 197 (405)
Q Consensus 118 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (405)
. .+..+.++++++|||+||.+++.++.+. .+|+++|++++.. .
T Consensus 54 ~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~-------~--------------------------- 96 (145)
T PF12695_consen 54 R--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYP-------D--------------------------- 96 (145)
T ss_dssp H--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESS-------G---------------------------
T ss_pred H--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCcc-------c---------------------------
Confidence 2 1123668999999999999999999998 7999999999620 0
Q ss_pred cccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCH
Q 015550 198 THYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQI 277 (405)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~ 277 (405)
.+.+...++|+++++|++|.++++
T Consensus 97 --------------------------------------------------------~~~~~~~~~pv~~i~g~~D~~~~~ 120 (145)
T PF12695_consen 97 --------------------------------------------------------SEDLAKIRIPVLFIHGENDPLVPP 120 (145)
T ss_dssp --------------------------------------------------------CHHHTTTTSEEEEEEETT-SSSHH
T ss_pred --------------------------------------------------------hhhhhccCCcEEEEEECCCCcCCH
Confidence 122345567999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCC-Ccc
Q 015550 278 CYARRLAEKLYPVARMIDLPG-GHL 301 (405)
Q Consensus 278 ~~~~~l~~~l~~~~~l~~~~g-gH~ 301 (405)
+..+++.+++..+.++++++| +|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 121 EQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 999999999866799999998 885
No 63
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.79 E-value=2.3e-18 Score=148.54 Aligned_cols=190 Identities=23% Similarity=0.282 Sum_probs=134.6
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.+++|++||...+......+...|...+ +++|+++|++|+|.|.+.+. ... ..+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~l---------------------n~nv~~~DYSGyG~S~G~ps--E~n---~y~ 113 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFL---------------------NCNVVSYDYSGYGRSSGKPS--ERN---LYA 113 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcc---------------------cceEEEEecccccccCCCcc--ccc---chh
Confidence 4789999999776665555556665432 89999999999999987664 333 344
Q ss_pred HHHHHHHHh----C-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhh
Q 015550 116 DVIALMDHL----G-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190 (405)
Q Consensus 116 dl~~~l~~l----~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (405)
|+.++.+.+ | .++++|+|+|+|+..++.+|.+.| +.++||.+|...+.. .+...
T Consensus 114 Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r---------------v~~~~---- 172 (258)
T KOG1552|consen 114 DIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR---------------VAFPD---- 172 (258)
T ss_pred hHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhh---------------hhccC----
Confidence 444444433 3 578999999999999999999998 999999998631110 00000
Q ss_pred hhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeec
Q 015550 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGR 270 (405)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~ 270 (405)
.. . .+.++ .....+.++.++||||++||+
T Consensus 173 ---~~------------------------------------~-~~~~d-----------~f~~i~kI~~i~~PVLiiHgt 201 (258)
T KOG1552|consen 173 ---TK------------------------------------T-TYCFD-----------AFPNIEKISKITCPVLIIHGT 201 (258)
T ss_pred ---cc------------------------------------e-EEeec-----------cccccCcceeccCCEEEEecc
Confidence 00 0 00000 001146678899999999999
Q ss_pred CCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 271 HDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 271 ~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
+|.+++..+..++.+......+-.++.| ||.- .+...++.+.+..|+......
T Consensus 202 dDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~-~~~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 202 DDEVVDFSHGKALYERCKEKVEPLWVKGAGHND-IELYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred cCceecccccHHHHHhccccCCCcEEecCCCcc-cccCHHHHHHHHHHHHHhccc
Confidence 9999999999999998744457677777 8876 455558888999999877643
No 64
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.79 E-value=1.2e-17 Score=178.23 Aligned_cols=264 Identities=16% Similarity=0.167 Sum_probs=146.3
Q ss_pred CCeEEEEecCCCCCCchhhh-----HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 36 PTKVILITGLAGTHDAWGPQ-----LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~-----~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
.++|||+||++.+...|+.+ ++.|.+ +||+|+++|+ |.++.+.....+++
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~~----------------------~g~~v~~~d~---G~~~~~~~~~~~~l 121 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILHR----------------------AGLDPWVIDF---GSPDKVEGGMERNL 121 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHHH----------------------CCCEEEEEcC---CCCChhHcCccCCH
Confidence 36799999999999999875 777866 4999999994 66665443234577
Q ss_pred HHHHHHHHHHHHH---hCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEeccCCCCCCCCcc-chhHHHHH----HH-
Q 015550 111 KIMAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPK-LDLQTLSI----AI- 180 (405)
Q Consensus 111 ~~~~~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~----~~- 180 (405)
.+++..+.+.++. +..++++++||||||++++.+++.+ |++|+++|+++++.......+. +....... ..
T Consensus 122 ~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 201 (994)
T PRK07868 122 ADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMAD 201 (994)
T ss_pred HHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchh
Confidence 7777666666654 3346899999999999999998755 5689999998887422111010 00000000 00
Q ss_pred HHhhc-cChhhhh--c---cCccccc--CHhHHHhhhCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhc-ccC
Q 015550 181 RFFRA-KTPEKRA--A---VDLDTHY--SQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMH-KMT 250 (405)
Q Consensus 181 ~~~~~-~~~~~~~--~---~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 250 (405)
..... ..+.... . ....... ...++........ ........+.....-. ......+...+..++.. ...
T Consensus 202 ~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~-~~~g~~~~~~~~~~~~~n~~~ 280 (994)
T PRK07868 202 HVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI-AWSGPAISELLKQFIAHNRMM 280 (994)
T ss_pred hhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc-ccchHHHHHHHHHHHHhCccc
Confidence 00000 0000000 0 0000000 0000000000000 0000001111000000 00000001111111110 000
Q ss_pred ------hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEE-EEcCC-Ccccccc---CHHHHHHHHHHHHH
Q 015550 251 ------QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARM-IDLPG-GHLVSHE---RTEEVNQALIDLIK 319 (405)
Q Consensus 251 ------~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l-~~~~g-gH~~~~e---~p~~v~~~i~~fl~ 319 (405)
......++++++|+|+|+|++|.++|++.++.+.+.+ +++++ ..+++ ||+.++- -++++...|.+||+
T Consensus 281 ~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i-~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~ 359 (994)
T PRK07868 281 TGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA-PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVK 359 (994)
T ss_pred CceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHH
Confidence 0111247889999999999999999999999999876 88887 45565 9987763 57899999999999
Q ss_pred hhcCCCC
Q 015550 320 ASEKKIS 326 (405)
Q Consensus 320 ~~~~~~~ 326 (405)
+......
T Consensus 360 ~~~~~~~ 366 (994)
T PRK07868 360 WLEGDGD 366 (994)
T ss_pred HhccCCC
Confidence 8776543
No 65
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.77 E-value=1.8e-17 Score=142.19 Aligned_cols=223 Identities=16% Similarity=0.116 Sum_probs=151.3
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
++.|+++|-.|+++..|+.+...|.. .+.++++++||+|.--..+. ..+++.+++
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~-----------------------~iel~avqlPGR~~r~~ep~--~~di~~Lad 61 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPA-----------------------DIELLAVQLPGRGDRFGEPL--LTDIESLAD 61 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCc-----------------------hhheeeecCCCcccccCCcc--cccHHHHHH
Confidence 34699999999999999999998886 79999999999998754443 668999999
Q ss_pred HHHHHHH-HhCCccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCCCCCCCccchhH---HHHHHHHHhhccCh
Q 015550 116 DVIALMD-HLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQ---TLSIAIRFFRAKTP 188 (405)
Q Consensus 116 dl~~~l~-~l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 188 (405)
.+..-+. -...+++.++||||||++|.++|.+.. ..+..+.+.++..+.......+... .+.....-+....+
T Consensus 62 ~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~ 141 (244)
T COG3208 62 ELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPP 141 (244)
T ss_pred HHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCCh
Confidence 9988887 354578999999999999999998742 2266777777665433222222111 11111111111111
Q ss_pred hhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
+... +.++.+-+...+... ...+-.... ..-..+.||+.++.
T Consensus 142 e~le----------------------d~El~~l~LPilRAD-----------~~~~e~Y~~-----~~~~pl~~pi~~~~ 183 (244)
T COG3208 142 ELLE----------------------DPELMALFLPILRAD-----------FRALESYRY-----PPPAPLACPIHAFG 183 (244)
T ss_pred HHhc----------------------CHHHHHHHHHHHHHH-----------HHHhccccc-----CCCCCcCcceEEec
Confidence 1111 111111111111100 000000000 01145779999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
|++|..+..+....|.++.....+++.++|||+...++.+++...|.+.+...
T Consensus 184 G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 184 GEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred cCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHhhhh
Confidence 99999999999999999887789999999999999999999999999998654
No 66
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.75 E-value=5.9e-18 Score=140.69 Aligned_cols=215 Identities=18% Similarity=0.190 Sum_probs=147.3
Q ss_pred ccCCEEEEE-EE-ccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 21 NDNGIKIFY-RT-YGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 21 ~~~g~~i~y-~~-~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
+-|.++++- .. .....|+++++||..|+....-+.+..+-.. -+.+|+.+++||+|.
T Consensus 61 T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~---------------------l~mnv~ivsYRGYG~ 119 (300)
T KOG4391|consen 61 TRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVN---------------------LKMNVLIVSYRGYGK 119 (300)
T ss_pred cCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHH---------------------cCceEEEEEeecccc
Confidence 345555542 22 2336789999999999998877777655443 289999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
|.+.+. -+.+.-|..++++++ ...+++++|.|.||.+|+.+|+...+++.++|+-++... +.
T Consensus 120 S~Gsps-----E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~S-------Ip 187 (300)
T KOG4391|consen 120 SEGSPS-----EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLS-------IP 187 (300)
T ss_pred CCCCcc-----ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhcc-------ch
Confidence 987663 233445666677766 335899999999999999999999999999999887521 00
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
..... +...+...++.. |..+....
T Consensus 188 ~~~i~------------------~v~p~~~k~i~~-------------------------------------lc~kn~~~ 212 (300)
T KOG4391|consen 188 HMAIP------------------LVFPFPMKYIPL-------------------------------------LCYKNKWL 212 (300)
T ss_pred hhhhh------------------eeccchhhHHHH-------------------------------------HHHHhhhc
Confidence 00000 000000001110 01111112
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
....++..+.|.|+|.|..|.++||-..+.+.+..+ ...++.++|+ .|.-.+- -+-..++|.+||.+....
T Consensus 213 S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 213 SYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred chhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhccC
Confidence 234456677999999999999999999999999762 3578999997 6865443 346789999999998754
No 67
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.73 E-value=1.8e-16 Score=140.57 Aligned_cols=260 Identities=17% Similarity=0.188 Sum_probs=151.5
Q ss_pred cccCCEEEEEEEccC---CCCeEEEEecCCCCCCc-hhhhH-----hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 20 LNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGPQL-----KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~-~~~~~-----~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
++..-..+++..+|+ ++|++|-.|-.|-++.+ |..+. ..+.+ .|.++-
T Consensus 4 v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-----------------------~f~i~H 60 (283)
T PF03096_consen 4 VETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-----------------------NFCIYH 60 (283)
T ss_dssp EEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-----------------------TSEEEE
T ss_pred eccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-----------------------ceEEEE
Confidence 445566888888896 36889999999998876 66654 44555 899999
Q ss_pred ecCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 91 FDNRGMGRSS--VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 91 ~D~~G~G~S~--~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+|.||+..-. .+......|++++++++.+++++++++.++.+|--.||.|..++|..+|++|.++||+++.+....+.
T Consensus 61 i~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~ 140 (283)
T PF03096_consen 61 IDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWM 140 (283)
T ss_dssp EE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HH
T ss_pred EeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHH
Confidence 9999996543 33333355899999999999999999999999999999999999999999999999999875332221
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhH-HHhhhCCCch--hHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY-LEEYVGSSTR--RAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
.+...+.... .+..... .....++ +..+++.... ...+.+.|...+...... ..+..++
T Consensus 141 Ew~~~K~~~~---~L~~~gm---------t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np------~Nl~~f~ 202 (283)
T PF03096_consen 141 EWFYQKLSSW---LLYSYGM---------TSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINP------KNLALFL 202 (283)
T ss_dssp HHHHHHHH----------CT---------TS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTH------HHHHHHH
T ss_pred HHHHHHHhcc---ccccccc---------ccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCH------HHHHHHH
Confidence 1111111111 1111000 0111111 1222221111 223455555555432211 1122223
Q ss_pred hcccChh-hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 246 MHKMTQK-DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 246 ~~~~~~~-~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
.....+. .........||+|++.|+..+.. +.+.++..++. .+.++..+++ |-++..|+|+.+++.+.-|++...
T Consensus 203 ~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 203 NSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp HHHHT-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTT
T ss_pred HHHhccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCC
Confidence 2222222 22334566799999999888754 56678888884 4578888887 999999999999999999998753
No 68
>PRK11460 putative hydrolase; Provisional
Probab=99.73 E-value=1.7e-16 Score=141.45 Aligned_cols=174 Identities=16% Similarity=0.135 Sum_probs=113.2
Q ss_pred CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC---------
Q 015550 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK--------- 104 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~--------- 104 (405)
+..|.||++||++++...|.++++.|.. .++.+..++.+|...+.....
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~----------------------~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~ 71 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAP----------------------AFPDALVVSVGGPEPSGNGAGRQWFSVQGI 71 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHH----------------------HCCCCEEECCCCCCCcCCCCCcccccCCCC
Confidence 3557899999999999999999999976 244445555555432211100
Q ss_pred CCCCC---HHHHHHHHHHHHH----HhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 105 KTEYT---TKIMAKDVIALMD----HLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 105 ~~~~~---~~~~~~dl~~~l~----~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
..... ..+..+.+.++++ ..++ ++++++|||+||.+++.++.++|+.+.+++.+++.. +..
T Consensus 72 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~------~~~---- 141 (232)
T PRK11460 72 TEDNRQARVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY------ASL---- 141 (232)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc------ccc----
Confidence 00111 1222233333333 3343 579999999999999999999998888888776431 000
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
+
T Consensus 142 ------------~------------------------------------------------------------------- 142 (232)
T PRK11460 142 ------------P------------------------------------------------------------------- 142 (232)
T ss_pred ------------c-------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
.....++|++++||++|.++|.+.++++.+.+ ..+++++++++ ||.+..+.-+.+.+.|.+++
T Consensus 143 ~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 143 ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 00012479999999999999999999988877 23578888898 99986544444444444443
No 69
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.72 E-value=4.3e-15 Score=130.02 Aligned_cols=114 Identities=29% Similarity=0.387 Sum_probs=99.6
Q ss_pred EEEEEEEccC-CCC--eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 25 IKIFYRTYGR-GPT--KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 25 ~~i~y~~~G~-~~p--~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
++--|.+..+ |.| +||-+||-+|++..|+.+.+.|.+ .|+++|.+++||+|.++.
T Consensus 21 ~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~----------------------~~iR~I~iN~PGf~~t~~ 78 (297)
T PF06342_consen 21 VQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDE----------------------AGIRFIGINYPGFGFTPG 78 (297)
T ss_pred EEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHH----------------------cCeEEEEeCCCCCCCCCC
Confidence 3445666654 444 799999999999999999999988 599999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCc-cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHLGWK-QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
++. ..|+-.+...-+.++++.++++ +++.+|||.|+-.|+.+|..+| ..++++++|++.
T Consensus 79 ~~~-~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 79 YPD-QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred Ccc-cccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 776 5889999999999999999885 6888999999999999999996 679999999864
No 70
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.70 E-value=1.4e-15 Score=132.64 Aligned_cols=266 Identities=17% Similarity=0.165 Sum_probs=173.5
Q ss_pred cccCCEEEEEEEccC---CCCeEEEEecCCCCCCc-hhhh-----HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 20 LNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGPQ-----LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~-~~~~-----~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
+++.-..+++..+|+ ++|.+|-.|.++-++.+ |..+ +..+.. .|.|+.
T Consensus 27 V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-----------------------~fcv~H 83 (326)
T KOG2931|consen 27 VETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-----------------------HFCVYH 83 (326)
T ss_pred eccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-----------------------heEEEe
Confidence 444445788888886 35778889999998866 6544 344554 699999
Q ss_pred ecCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 91 FDNRGMGRS--SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 91 ~D~~G~G~S--~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+|.|||-.- .-+.+...-+++++++++..++++++.+.++-+|--.|+.|..++|..||+||.+|||+++.+....+.
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi 163 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI 163 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH
Confidence 999999544 334433355899999999999999999999999999999999999999999999999999875332221
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc--hhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
.+...+.. ..++......... ..-.+...++... ....+.++|.+.+.......+ +...++++..
T Consensus 164 ew~~~K~~---s~~l~~~Gmt~~~--------~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~N--l~~fl~ayn~ 230 (326)
T KOG2931|consen 164 EWAYNKVS---SNLLYYYGMTQGV--------KDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKN--LALFLNAYNG 230 (326)
T ss_pred HHHHHHHH---HHHHHhhchhhhH--------HHHHHHHHhccccccccHHHHHHHHHHHHhcCChhH--HHHHHHHhcC
Confidence 11111111 1111111111100 0111222232221 244566777776655433222 1222333332
Q ss_pred cccChhhhhhh-hhcCCcEEEEeecCCccCCHHHHHHHHHHh-CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 247 HKMTQKDIQTI-RSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 247 ~~~~~~~~~~l-~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
+.......... ..++||+|++.|++.+.+ +.+.++..++ ..+..+..+.+ |-.+..++|..+.+.+.-|++...-
T Consensus 231 R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy 308 (326)
T KOG2931|consen 231 RRDLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGY 308 (326)
T ss_pred CCCccccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCCc
Confidence 22222222111 256799999999888754 4666777777 34677888877 9999999999999999999988763
No 71
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.70 E-value=2e-16 Score=142.39 Aligned_cols=103 Identities=21% Similarity=0.239 Sum_probs=85.2
Q ss_pred CCeEEEEecCCCCC----CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 36 PTKVILITGLAGTH----DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 36 ~p~vvllHG~~~~~----~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
.++||++||+++.. ..|..+++.|.+ +||+|+++|+||||.|..... ..+++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~----------------------~Gy~Vl~~Dl~G~G~S~g~~~--~~~~~ 80 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAA----------------------GGFGVLQIDLYGCGDSAGDFA--AARWD 80 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHH----------------------CCCEEEEECCCCCCCCCCccc--cCCHH
Confidence 35799999998753 346667788876 499999999999999976543 45778
Q ss_pred HHHHHHHHHHH---HhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 112 IMAKDVIALMD---HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 112 ~~~~dl~~~l~---~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+++|+.++++ +.+.++++++||||||.+++.+|.++|++++++|+++|..
T Consensus 81 ~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 88888777554 4467899999999999999999999999999999999864
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=99.67 E-value=7.9e-15 Score=134.72 Aligned_cols=117 Identities=22% Similarity=0.312 Sum_probs=79.8
Q ss_pred CCEEEEEEEc------cCCCCeEEEEecCCCCCCchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 23 NGIKIFYRTY------GRGPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 23 ~g~~i~y~~~------G~~~p~vvllHG~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
-+..+.|..+ +.+-|+|+++||++++...|... ...+.. .|+.|+.+|.
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~Vv~pd~ 85 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAA----------------------RGIALVAPDT 85 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhh----------------------cCeEEEecCC
Confidence 3445555554 23457899999999988776432 233333 4999999998
Q ss_pred CCCCC-----CCC-----C-------C-C------CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC
Q 015550 94 RGMGR-----SSV-----P-------V-K------KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 94 ~G~G~-----S~~-----~-------~-~------~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
.++|. +.. . . . ...+-.+++.+.+....+.++.++++++||||||..|+.++.++|
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p 165 (283)
T PLN02442 86 SPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNP 165 (283)
T ss_pred CCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCc
Confidence 87661 110 0 0 0 001123344444555555567789999999999999999999999
Q ss_pred cccceEEEeccC
Q 015550 150 ERVLSLALLNVT 161 (405)
Q Consensus 150 ~~v~~lvl~~~~ 161 (405)
+++++++++++.
T Consensus 166 ~~~~~~~~~~~~ 177 (283)
T PLN02442 166 DKYKSVSAFAPI 177 (283)
T ss_pred hhEEEEEEECCc
Confidence 999999999876
No 73
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.67 E-value=9.1e-16 Score=137.01 Aligned_cols=246 Identities=17% Similarity=0.183 Sum_probs=134.2
Q ss_pred CCCeEEEEecCCCCCCc-h-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~-~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
..|.||++||+.|+..+ | +.+...+.+ +||.|+++|.|||+.+...... -|+ .-
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~----------------------rg~~~Vv~~~Rgcs~~~n~~p~-~yh-~G 129 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSR----------------------RGWLVVVFHFRGCSGEANTSPR-LYH-SG 129 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHh----------------------cCCeEEEEecccccCCcccCcc-eec-cc
Confidence 34789999999887754 3 445566666 5999999999999998653321 121 12
Q ss_pred HHHHHHHHHHHh----CCccEEEEEEChhH-HHHHHHHHhCCc-ccceEEEeccCCCCCCCCccchhHHHHH-----HHH
Q 015550 113 MAKDVIALMDHL----GWKQAHVFGHSMGA-MIACKLAAMVPE-RVLSLALLNVTGGGFQCCPKLDLQTLSI-----AIR 181 (405)
Q Consensus 113 ~~~dl~~~l~~l----~~~~v~lvGhS~Gg-~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~-----~~~ 181 (405)
+.+|+..+++.+ ...++..+|.|+|| +++..++..--+ .+.+.+.++.+..-..+.+.++...... ..+
T Consensus 130 ~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~ 209 (345)
T COG0429 130 ETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLR 209 (345)
T ss_pred chhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHH
Confidence 225555555544 55799999999999 666666655322 3455555554321111111111111100 001
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCCchh-HHHHHH--HHhhhhhccccCcccchhhhHHhhhcccChhhhhhhh
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRR-AILYQE--YVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (405)
.+....... +..+-...... ....+. .+..++..--....++......+ . .......+.
T Consensus 210 ~L~~~~~~k--------------l~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYY-r---~aSs~~~L~ 271 (345)
T COG0429 210 NLKRNAARK--------------LKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYY-R---QASSLPLLP 271 (345)
T ss_pred HHHHHHHHH--------------HHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHH-H---hcccccccc
Confidence 111100000 00000000000 001110 01111111111222333222221 1 122345678
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcC-CCcccccc----CHH-HHHHHHHHHHHhhc
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHE----RTE-EVNQALIDLIKASE 322 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~-ggH~~~~e----~p~-~v~~~i~~fl~~~~ 322 (405)
+|.+|+||||..+|++++++...+......|+..+..-+ |||..++. ++. ...+.|.+|++...
T Consensus 272 ~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 272 KIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred ccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 899999999999999999988887777566888888776 69998887 343 45677888887654
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.66 E-value=3.9e-15 Score=123.96 Aligned_cols=215 Identities=19% Similarity=0.270 Sum_probs=131.1
Q ss_pred eEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 38 KVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 38 ~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.+|++||+-++... ...++..|.+ .|+.++.||++|.|.|...-....|.. .++
T Consensus 35 ~vvlcHGfrS~Kn~~~~~~vA~~~e~----------------------~gis~fRfDF~GnGeS~gsf~~Gn~~~--ead 90 (269)
T KOG4667|consen 35 IVVLCHGFRSHKNAIIMKNVAKALEK----------------------EGISAFRFDFSGNGESEGSFYYGNYNT--EAD 90 (269)
T ss_pred EEEEeeccccccchHHHHHHHHHHHh----------------------cCceEEEEEecCCCCcCCccccCcccc--hHH
Confidence 69999999887753 4566777777 599999999999999987654334443 569
Q ss_pred HHHHHHHHhCCc-c--EEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 116 DVIALMDHLGWK-Q--AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 116 dl~~~l~~l~~~-~--v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
|+..++.++.-. + -+++|||-||-+++.+|.++++ +.-+|-+++-... ..... ..+.
T Consensus 91 DL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl--------~~~I~---eRlg-------- 150 (269)
T KOG4667|consen 91 DLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL--------KNGIN---ERLG-------- 150 (269)
T ss_pred HHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccch--------hcchh---hhhc--------
Confidence 999999998533 2 3679999999999999999987 6666666543210 00000 0000
Q ss_pred ccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhh--hcCCcEEEEeec
Q 015550 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR--SAGFLVSVIHGR 270 (405)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~Pvlvi~G~ 270 (405)
+.+++.... +.++..-.+. ..+.+ .....+....+..+.-+... ..+||||-+||.
T Consensus 151 ---------~~~l~~ike---------~Gfid~~~rk---G~y~~-rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs 208 (269)
T KOG4667|consen 151 ---------EDYLERIKE---------QGFIDVGPRK---GKYGY-RVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGS 208 (269)
T ss_pred ---------ccHHHHHHh---------CCceecCccc---CCcCc-eecHHHHHHHHhchhhhhhcCcCccCceEEEecc
Confidence 000000000 0000000000 00000 00011111111122222222 247999999999
Q ss_pred CCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 271 HDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 271 ~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.|.++|.+.+.++++.+ ++.++..++| .|..... ..+.+.....|.+.
T Consensus 209 ~D~IVPve~AkefAk~i-~nH~L~iIEgADHnyt~~-q~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 209 EDEIVPVEDAKEFAKII-PNHKLEIIEGADHNYTGH-QSQLVSLGLEFIKT 257 (269)
T ss_pred CCceeechhHHHHHHhc-cCCceEEecCCCcCccch-hhhHhhhcceeEEe
Confidence 99999999999999987 8899999999 8876433 34555555555544
No 75
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.66 E-value=6.2e-15 Score=149.47 Aligned_cols=227 Identities=21% Similarity=0.223 Sum_probs=144.3
Q ss_pred cccccCCEEEEEEEccC---CC----CeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 18 AALNDNGIKIFYRTYGR---GP----TKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~----p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
++...||.+|+....-+ ++ |+||++||.+..... |......|+. +||.|
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~----------------------~G~~V 426 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLAS----------------------AGYAV 426 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhc----------------------CCeEE
Confidence 34556888888877654 22 789999999865544 5566667766 59999
Q ss_pred EEecCCCCCCC---CCC--C-CCCCCCHHHHHHHHHHHHHHhC---CccEEEEEEChhHHHHHHHHHhCCcccceEEEec
Q 015550 89 CAFDNRGMGRS---SVP--V-KKTEYTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (405)
Q Consensus 89 i~~D~~G~G~S---~~~--~-~~~~~~~~~~~~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 159 (405)
+.+|+||-+.- -.. . .......+++.+.+. ++...+ .++++++|||+||.+++..+...| ++++.+...
T Consensus 427 ~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~ 504 (620)
T COG1506 427 LAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVA 504 (620)
T ss_pred EEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEecc
Confidence 99999976442 111 1 112335555655555 444443 248999999999999999999988 777777666
Q ss_pred cCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchh
Q 015550 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (405)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (405)
+...... .........+.. ............ +.|
T Consensus 505 ~~~~~~~---------------~~~~~~~~~~~~-----------~~~~~~~~~~~~---~~~----------------- 538 (620)
T COG1506 505 GGVDWLL---------------YFGESTEGLRFD-----------PEENGGGPPEDR---EKY----------------- 538 (620)
T ss_pred Ccchhhh---------------hccccchhhcCC-----------HHHhCCCcccCh---HHH-----------------
Confidence 5421000 000000000000 000000000000 000
Q ss_pred hhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc-cCHHHHHHHH
Q 015550 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-ERTEEVNQAL 314 (405)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~-e~p~~v~~~i 314 (405)
..........++++|+|+|||++|..+|.+.+.++.+.| ...++++++|+ ||.+.. ++...+.+.+
T Consensus 539 ---------~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 539 ---------EDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred ---------HhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 011223445788899999999999999999999999887 35689999998 998876 4567788888
Q ss_pred HHHHHhhcC
Q 015550 315 IDLIKASEK 323 (405)
Q Consensus 315 ~~fl~~~~~ 323 (405)
.+|+++...
T Consensus 610 ~~~~~~~~~ 618 (620)
T COG1506 610 LDWFKRHLK 618 (620)
T ss_pred HHHHHHHhc
Confidence 888887653
No 76
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.66 E-value=7.4e-15 Score=129.53 Aligned_cols=184 Identities=22% Similarity=0.271 Sum_probs=113.4
Q ss_pred CCeEEEEecCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 84 AGIEVCAFDNRGMGRSSVPVK--KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
+||.|+.+|+||.+....... .....-....+|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~ 92 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAA 92 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEE
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeee
Confidence 599999999999875321100 00111223455666666554 3368999999999999999999999999999
Q ss_pred EEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcc
Q 015550 156 ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (405)
Q Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
|..++............. +........ .........+..
T Consensus 93 v~~~g~~d~~~~~~~~~~--------------------------~~~~~~~~~-~~~~~~~~~~~~-------------- 131 (213)
T PF00326_consen 93 VAGAGVSDLFSYYGTTDI--------------------------YTKAEYLEY-GDPWDNPEFYRE-------------- 131 (213)
T ss_dssp EEESE-SSTTCSBHHTCC--------------------------HHHGHHHHH-SSTTTSHHHHHH--------------
T ss_pred eccceecchhcccccccc--------------------------ccccccccc-Cccchhhhhhhh--------------
Confidence 999876321111100000 000000000 000000111111
Q ss_pred cchhhhHHhhhcccChhhhhhhhh--cCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccc-ccCHH
Q 015550 236 GFDGQIHACWMHKMTQKDIQTIRS--AGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS-HERTE 308 (405)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~-~e~p~ 308 (405)
......+.+ +++|+|++||++|..+|++.+.++.+.+ ..+++++++++ ||... .+...
T Consensus 132 ---------------~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~ 196 (213)
T PF00326_consen 132 ---------------LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRR 196 (213)
T ss_dssp ---------------HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHH
T ss_pred ---------------hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHH
Confidence 011122333 6799999999999999999999998877 34589999998 99555 34556
Q ss_pred HHHHHHHHHHHhhcC
Q 015550 309 EVNQALIDLIKASEK 323 (405)
Q Consensus 309 ~v~~~i~~fl~~~~~ 323 (405)
++.+.+.+|+++...
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 889999999988654
No 77
>PLN00021 chlorophyllase
Probab=99.64 E-value=4.5e-15 Score=137.29 Aligned_cols=103 Identities=15% Similarity=0.075 Sum_probs=75.1
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
..|+|||+||++.+...|..+++.|+. .||.|+++|++|++.+.... ...+..+..
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las----------------------~G~~VvapD~~g~~~~~~~~--~i~d~~~~~ 106 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIAS----------------------HGFIVVAPQLYTLAGPDGTD--EIKDAAAVI 106 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHh----------------------CCCEEEEecCCCcCCCCchh--hHHHHHHHH
Confidence 347899999999999999999999987 49999999999975432111 011122223
Q ss_pred HHHHHHHHH-------hCCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccC
Q 015550 115 KDVIALMDH-------LGWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (405)
Q Consensus 115 ~dl~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~ 161 (405)
+.+.+.++. .+.++++++||||||.+|+.+|..+++ +++++|++++.
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 333332222 234689999999999999999999874 58999999876
No 78
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.64 E-value=6.3e-14 Score=128.42 Aligned_cols=118 Identities=22% Similarity=0.313 Sum_probs=82.8
Q ss_pred CCEEEEEEEccC------CCCeEEEEecCCCCCCchhhh--HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC-
Q 015550 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN- 93 (405)
Q Consensus 23 ~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~- 93 (405)
-+..+.|..+-+ ..|+|+++||++++...|... +..+... .|+.|+++|.
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~---------------------~g~~Vv~Pd~~ 81 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAE---------------------HGLALVAPDTS 81 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhh---------------------cCcEEEEeCCC
Confidence 445555555543 247899999999999888532 3344431 3899999998
Q ss_pred -CCCCCCCCCC------------------CCCCCCHHH-HHHHHHHHHHH---hCCccEEEEEEChhHHHHHHHHHhCCc
Q 015550 94 -RGMGRSSVPV------------------KKTEYTTKI-MAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPE 150 (405)
Q Consensus 94 -~G~G~S~~~~------------------~~~~~~~~~-~~~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 150 (405)
+|+|.+.... ....++..+ +++++..+++. ++.++++++||||||.+|+.++.++|+
T Consensus 82 ~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~ 161 (275)
T TIGR02821 82 PRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD 161 (275)
T ss_pred CCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc
Confidence 5555332110 001223333 46788888876 355789999999999999999999999
Q ss_pred ccceEEEeccC
Q 015550 151 RVLSLALLNVT 161 (405)
Q Consensus 151 ~v~~lvl~~~~ 161 (405)
.+++++++++.
T Consensus 162 ~~~~~~~~~~~ 172 (275)
T TIGR02821 162 RFKSVSAFAPI 172 (275)
T ss_pred cceEEEEECCc
Confidence 99999999876
No 79
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.61 E-value=3.3e-14 Score=126.80 Aligned_cols=219 Identities=16% Similarity=0.198 Sum_probs=136.5
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCC-eEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g-~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
+|+|+|+.+++...|.++++.|.. . +.|++++.+|.+....+ ..+++++++.
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~-----------------------~~~~v~~i~~~~~~~~~~~----~~si~~la~~ 54 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD-----------------------DVIGVYGIEYPGRGDDEPP----PDSIEELASR 54 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT-----------------------TEEEEEEECSTTSCTTSHE----ESSHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC-----------------------CeEEEEEEecCCCCCCCCC----CCCHHHHHHH
Confidence 699999999999999999999987 5 99999999999833322 4589999999
Q ss_pred HHHHHHHhCCc-cEEEEEEChhHHHHHHHHHhC---CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 117 VIALMDHLGWK-QAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 117 l~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
..+.+.....+ +++|+|||+||.+|..+|.+- ...|..++++++..+...................+......
T Consensus 55 y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 131 (229)
T PF00975_consen 55 YAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGT--- 131 (229)
T ss_dssp HHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHH---
T ss_pred HHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCC---
Confidence 99888877655 999999999999999999763 34599999999764332111111111111100111000000
Q ss_pred ccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCC
Q 015550 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272 (405)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D 272 (405)
.............+...+... ........ ........+|.++.....|
T Consensus 132 ----------------~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 179 (229)
T PF00975_consen 132 ----------------PDASLEDEELLARLLRALRDD-----------FQALENYS-----IRPIDKQKVPITLFYALDD 179 (229)
T ss_dssp ----------------HHHHCHHHHHHHHHHHHHHHH-----------HHHHHTCS------TTSSSESSEEEEEEECSS
T ss_pred ----------------chhhhcCHHHHHHHHHHHHHH-----------HHHHhhcc-----CCccccCCCcEEEEecCCC
Confidence 000000000011111111000 00000000 0001111467899999999
Q ss_pred ccCCHH---HHHHHHHHhCCCeEEEEcCCCcccccc-CHHHHHHHHHHHH
Q 015550 273 VIAQIC---YARRLAEKLYPVARMIDLPGGHLVSHE-RTEEVNQALIDLI 318 (405)
Q Consensus 273 ~~~~~~---~~~~l~~~l~~~~~l~~~~ggH~~~~e-~p~~v~~~i~~fl 318 (405)
...... ....+.+......+++.++|+|+.++. +..++++.|.++|
T Consensus 180 ~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 180 PLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHSTTHHHHHHHHHHHH
T ss_pred ccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecchHHHHHHHHHhccC
Confidence 988766 344566655556789999999998887 7788999888875
No 80
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.61 E-value=4.2e-14 Score=137.02 Aligned_cols=249 Identities=14% Similarity=0.107 Sum_probs=144.8
Q ss_pred ccccCCCCccc-ccCCEEEEEEEc-cC--CCCeEEEEecCCCCCCch-----hhhHhhhcCCCCCCCCchhhhccccCCC
Q 015550 10 KEQSAAPDAAL-NDNGIKIFYRTY-GR--GPTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVESG 80 (405)
Q Consensus 10 ~~~~~~~~~~~-~~~g~~i~y~~~-G~--~~p~vvllHG~~~~~~~~-----~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 80 (405)
+.....|.+++ ..+-.++..+.- .. .++|||+++.+......| ..+++.|.+
T Consensus 185 ~~~a~TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~------------------- 245 (560)
T TIGR01839 185 KNLATTEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLK------------------- 245 (560)
T ss_pred CCCCCCCCceeEECCceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHH-------------------
Confidence 44444455444 344444443322 11 235799999998666656 467888877
Q ss_pred CCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHH----HHHhCCc-c
Q 015550 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACK----LAAMVPE-R 151 (405)
Q Consensus 81 l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~----~a~~~p~-~ 151 (405)
+||+|+.+|+++-+... ..++++++++.+.+.++.+ |.++++++||||||.++.. +++++++ +
T Consensus 246 ---qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~ 317 (560)
T TIGR01839 246 ---NQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRK 317 (560)
T ss_pred ---cCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCc
Confidence 69999999999876653 3568888888777777765 6789999999999999987 7888886 8
Q ss_pred cceEEEeccCCCCCCCC---ccchhHHHHHHHHHh--hccChhhhhc--c---CcccccCHhHHHhh-------------
Q 015550 152 VLSLALLNVTGGGFQCC---PKLDLQTLSIAIRFF--RAKTPEKRAA--V---DLDTHYSQEYLEEY------------- 208 (405)
Q Consensus 152 v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~--~---~~~~~~~~~~~~~~------------- 208 (405)
|++++++.+.......- ...+...+....... ....+..... + ........-++..+
T Consensus 318 V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~ 397 (560)
T TIGR01839 318 VNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILY 397 (560)
T ss_pred eeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHH
Confidence 99999998865422110 001111111100000 0000000000 0 00000000001111
Q ss_pred -hCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh-------hhhhhhhhcCCcEEEEeecCCccCCHHH
Q 015550 209 -VGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ-------KDIQTIRSAGFLVSVIHGRHDVIAQICY 279 (405)
Q Consensus 209 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~i~~Pvlvi~G~~D~~~~~~~ 279 (405)
..+.. ....++.+|...+ ....+.. ...-.+++|+||++++.|+.|.|+|++.
T Consensus 398 Wn~D~t~lPg~~~~e~l~ly------------------~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s 459 (560)
T TIGR01839 398 WNNDTTRLPAAFHGDLLDMF------------------KSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDA 459 (560)
T ss_pred HhCcCccchHHHHHHHHHHH------------------hcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHH
Confidence 11111 1111222222111 1111111 1123468899999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCCcccc
Q 015550 280 ARRLAEKLYPVARMIDLPGGHLVS 303 (405)
Q Consensus 280 ~~~l~~~l~~~~~l~~~~ggH~~~ 303 (405)
+..+.+.+..+.+++..++||..-
T Consensus 460 ~~~~~~l~gs~~~fvl~~gGHIgg 483 (560)
T TIGR01839 460 VYRSALLLGGKRRFVLSNSGHIQS 483 (560)
T ss_pred HHHHHHHcCCCeEEEecCCCcccc
Confidence 999999886678888888899654
No 81
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.59 E-value=6.5e-14 Score=129.81 Aligned_cols=251 Identities=14% Similarity=0.189 Sum_probs=131.8
Q ss_pred CCCeEEEEecCCCCCCc-h-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~-~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
..|.||++||+.+++.. | +.++..+.+ +||+|+.++.||+|.|.-.+.. -| ...
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~----------------------~G~r~VVfN~RG~~g~~LtTpr-~f-~ag 179 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQR----------------------KGYRVVVFNHRGLGGSKLTTPR-LF-TAG 179 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHh----------------------CCcEEEEECCCCCCCCccCCCc-ee-ecC
Confidence 45889999999877643 3 344444444 5999999999999999765541 22 222
Q ss_pred HHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcc---cceEEEeccCCCCCCCCccchhHHHHHHHHHhhc
Q 015550 113 MAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPER---VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185 (405)
Q Consensus 113 ~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (405)
+.+|+.++++++ ...++..+|.||||++.+.|..+..++ +.++++.+|.- .......+........+.....
T Consensus 180 ~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd-~~~~~~~~~~~~~~~~y~~~l~ 258 (409)
T KOG1838|consen 180 WTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD-LLAASRSIETPLYRRFYNRALT 258 (409)
T ss_pred CHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch-hhhhhhHHhcccchHHHHHHHH
Confidence 445666666655 456899999999999999998875443 44555555431 1000000111111111111111
Q ss_pred cChhhhhccCccccc-CHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcE
Q 015550 186 KTPEKRAAVDLDTHY-SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264 (405)
Q Consensus 186 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (405)
............... .....+..... ...+++-+.+ ....++|.. ...++.. ......+.+|++|+
T Consensus 259 ~~l~~~~~~~r~~~~~~~vd~d~~~~~-----~SvreFD~~~----t~~~~gf~~-~deYY~~---aSs~~~v~~I~VP~ 325 (409)
T KOG1838|consen 259 LNLKRIVLRHRHTLFEDPVDFDVILKS-----RSVREFDEAL----TRPMFGFKS-VDEYYKK---ASSSNYVDKIKVPL 325 (409)
T ss_pred HhHHHHHhhhhhhhhhccchhhhhhhc-----CcHHHHHhhh----hhhhcCCCc-HHHHHhh---cchhhhcccccccE
Confidence 000000000000000 00000001111 1111211111 122223332 2222222 23446678899999
Q ss_pred EEEeecCCccCCHHHHHHHHHHhCCCeEEEEcC-CCccccccC----HHHHH-HHHHHHHHhhcC
Q 015550 265 SVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHER----TEEVN-QALIDLIKASEK 323 (405)
Q Consensus 265 lvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~-ggH~~~~e~----p~~v~-~~i~~fl~~~~~ 323 (405)
|+|+..+|+++|++....-..+-.|+.-+++-. |||..++|. +.... +.+.+|+.....
T Consensus 326 L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 326 LCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred EEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 999999999999864433332224666666554 799999886 22333 337777766654
No 82
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.58 E-value=7.4e-14 Score=123.30 Aligned_cols=179 Identities=22% Similarity=0.225 Sum_probs=105.9
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHh-hhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC------CCC---CCCC
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLK-GLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG------MGR---SSVP 102 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~-~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G------~G~---S~~~ 102 (405)
++..++||++||+|++.+.|..... .+.. ....++.++-|- .|. +-.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~----------------------~~~~~i~p~ap~~~~~~~~g~~~~~Wf~ 68 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLAL----------------------PNTRFISPRAPSRPVTVPGGYRMPAWFD 68 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCS----------------------TTEEEEEE---EEE-GGGTT-EEE-SS-
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccC----------------------CceEEEeccCCCCCcccccccCCCceee
Confidence 4456789999999999977665555 2222 266777665442 222 1111
Q ss_pred -----CCC--CCCCHHHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 103 -----VKK--TEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 103 -----~~~--~~~~~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
... ..-.+.+.++.+.++++.. ..++++++|.|+||++|+.++.++|+.+.++|.+++.......
T Consensus 69 ~~~~~~~~~~~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--- 145 (216)
T PF02230_consen 69 IYDFDPEGPEDEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--- 145 (216)
T ss_dssp BSCSSSSSEB-HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC---
T ss_pred ccCCCcchhhhHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc---
Confidence 000 0112333344455555532 3468999999999999999999999999999999975210000
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
.
T Consensus 146 -------------------------------------------------------------------------------~ 146 (216)
T PF02230_consen 146 -------------------------------------------------------------------------------L 146 (216)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
....... .++|++++||++|.++|.+.++...+.+ ..+.+++.++| ||.+. .+..+.+.+||+++
T Consensus 147 ~~~~~~~--~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 147 EDRPEAL--AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HCCHCCC--CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred ccccccc--CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 0000011 1589999999999999999888888777 34688999996 99775 35555677777654
No 83
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.58 E-value=2.1e-14 Score=136.76 Aligned_cols=113 Identities=23% Similarity=0.416 Sum_probs=86.9
Q ss_pred ccCCCCeEEEEecCCCCC--Cchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 015550 32 YGRGPTKVILITGLAGTH--DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (405)
Q Consensus 32 ~G~~~p~vvllHG~~~~~--~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~ 108 (405)
..+..|++|+|||++++. +.|.+ +.+.|... ...++||++|++|+|.+..+.. ..
T Consensus 37 Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~--------------------~~d~nVI~VDw~g~g~s~y~~a--~~ 94 (442)
T TIGR03230 37 FNHETKTFIVIHGWTVTGMFESWVPKLVAALYER--------------------EPSANVIVVDWLSRAQQHYPTS--AA 94 (442)
T ss_pred cCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhc--------------------cCCCEEEEEECCCcCCCCCccc--cc
Confidence 344567899999998754 34665 45555321 0269999999999998865543 23
Q ss_pred CHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 109 TTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 109 ~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
....+++++.++++.+ ++++++|+||||||.+|..++..+|++|.++++++|+++.+.
T Consensus 95 ~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 95 YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCccc
Confidence 4466777788777765 368999999999999999999999999999999999876554
No 84
>COG0400 Predicted esterase [General function prediction only]
Probab=99.56 E-value=8.8e-14 Score=119.76 Aligned_cols=172 Identities=21% Similarity=0.187 Sum_probs=115.0
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC----CCCCCCCCCCCCCCC-
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GMGRSSVPVKKTEYT- 109 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~----G~G~S~~~~~~~~~~- 109 (405)
..|+||++||+|++...+-+....+.. ++.++.+--+ |-.+=........++
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P-----------------------~~~~is~rG~v~~~g~~~~f~~~~~~~~d~ 73 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILP-----------------------NATLVSPRGPVAENGGPRFFRRYDEGSFDQ 73 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCC-----------------------CCeEEcCCCCccccCcccceeecCCCccch
Confidence 446799999999999888886655555 4444443211 000000000001222
Q ss_pred ------HHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 110 ------TKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 110 ------~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
.+.+++.+..+.+..++ ++++++|+|.||++++.+..++|+.++++|++++......
T Consensus 74 edl~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------- 138 (207)
T COG0400 74 EDLDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------- 138 (207)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC---------------
Confidence 34455555556666666 6899999999999999999999999999999998631100
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcC
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (405)
. ..-....
T Consensus 139 ----------------------------------------------------------------------~--~~~~~~~ 146 (207)
T COG0400 139 ----------------------------------------------------------------------E--LLPDLAG 146 (207)
T ss_pred ----------------------------------------------------------------------c--cccccCC
Confidence 0 0001224
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCCCccccccCHHHHHHHHHHHHHh
Q 015550 262 FLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 262 ~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.||+++||+.|+++|...+.++.+.+ ..+++.+++++||-+..+.- +.+.+|+..
T Consensus 147 ~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~e~~----~~~~~wl~~ 204 (207)
T COG0400 147 TPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPPEEL----EAARSWLAN 204 (207)
T ss_pred CeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCHHHH----HHHHHHHHh
Confidence 79999999999999999888888766 45688888899997765544 444446554
No 85
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.53 E-value=4.4e-13 Score=134.61 Aligned_cols=117 Identities=17% Similarity=0.129 Sum_probs=88.9
Q ss_pred cCCEEEEEEEcc---C-CCCeEEEEecCCCCCC---ch-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 22 DNGIKIFYRTYG---R-GPTKVILITGLAGTHD---AW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 22 ~~g~~i~y~~~G---~-~~p~vvllHG~~~~~~---~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.||.+|++..+- . ..|+||++||++.+.. .+ ......|.+ +||.|+++|+
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~----------------------~Gy~vv~~D~ 61 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVA----------------------QGYAVVIQDT 61 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHh----------------------CCcEEEEEec
Confidence 478899865553 2 3478999999987653 12 223345555 4999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
||+|.|..... .++ ...++|+.++++.+.. .++.++||||||.+++.+|..+|++++++|..++...
T Consensus 62 RG~g~S~g~~~--~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 62 RGRGASEGEFD--LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred cccccCCCceE--ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 99999986543 233 4577888888887632 4899999999999999999999999999999887643
No 86
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.53 E-value=3.1e-14 Score=129.90 Aligned_cols=119 Identities=17% Similarity=0.293 Sum_probs=88.7
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCC-CchhhhH-hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~-~~~~~~~-~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
++..+.+....+..|++|+|||++++. ..|...+ ..+... .+++|+++|+++++.+.
T Consensus 23 ~~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~---------------------~~~nVi~vD~~~~~~~~ 81 (275)
T cd00707 23 DPSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSR---------------------GDYNVIVVDWGRGANPN 81 (275)
T ss_pred ChhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhc---------------------CCCEEEEEECccccccC
Confidence 355677777777788999999999987 6676544 334321 28999999999984332
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCC
Q 015550 101 VPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (405)
.+. ...++..+++++.++++.+ +.++++++||||||.+|..++..+|++|.++++++|..+.
T Consensus 82 y~~--a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 82 YPQ--AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred hHH--HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 211 2334555666666666654 4468999999999999999999999999999999998643
No 87
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.52 E-value=3.1e-13 Score=126.27 Aligned_cols=209 Identities=20% Similarity=0.252 Sum_probs=111.4
Q ss_pred CeEEEEecCCCCCCchh-hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 37 TKVILITGLAGTHDAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~-~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
|+||++.|+-+..+.+. .+.+.|.. +|+.++++|.||.|.|...+. ..+.+.+..
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~----------------------rGiA~LtvDmPG~G~s~~~~l--~~D~~~l~~ 246 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAP----------------------RGIAMLTVDMPGQGESPKWPL--TQDSSRLHQ 246 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHH----------------------CT-EEEEE--TTSGGGTTT-S---S-CCHHHH
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHh----------------------CCCEEEEEccCCCcccccCCC--CcCHHHHHH
Confidence 55666666666665544 44466766 499999999999999864332 223344556
Q ss_pred HHHHHHHHhC---CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 116 DVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 116 dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
.+.+.+.... ..+|.++|.|+||.+|.++|..+++|++++|.++++...+. ... .... ..|..
T Consensus 247 aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~f-----t~~------~~~~-~~P~m-- 312 (411)
T PF06500_consen 247 AVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFF-----TDP------EWQQ-RVPDM-- 312 (411)
T ss_dssp HHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGG-----H-H------HHHT-TS-HH--
T ss_pred HHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhh-----ccH------HHHh-cCCHH--
Confidence 6666666554 35899999999999999999999999999999998642111 000 0000 00100
Q ss_pred ccCcccccCHhHHHhhhCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhh--hhcCCcEEEEee
Q 015550 193 AVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI--RSAGFLVSVIHG 269 (405)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvlvi~G 269 (405)
+. ..+...++... ....+..+ ...++ -.....+ ++..+|+|.+.|
T Consensus 313 -------y~-d~LA~rlG~~~~~~~~l~~e-l~~~S-----------------------Lk~qGlL~~rr~~~plL~i~~ 360 (411)
T PF06500_consen 313 -------YL-DVLASRLGMAAVSDESLRGE-LNKFS-----------------------LKTQGLLSGRRCPTPLLAING 360 (411)
T ss_dssp -------HH-HHHHHHCT-SCE-HHHHHHH-GGGGS-----------------------TTTTTTTTSS-BSS-EEEEEE
T ss_pred -------HH-HHHHHHhCCccCCHHHHHHH-HHhcC-----------------------cchhccccCCCCCcceEEeec
Confidence 00 11111111111 11111111 11110 0011122 567799999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCeEEEEcCC-C-ccccccCHHHHHHHHHHHHHh
Q 015550 270 RHDVIAQICYARRLAEKLYPVARMIDLPG-G-HLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 270 ~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-g-H~~~~e~p~~v~~~i~~fl~~ 320 (405)
++|.++|.+..+-+++. ..+.+...++. . |..+ +.-...+.+||+.
T Consensus 361 ~~D~v~P~eD~~lia~~-s~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 361 EDDPVSPIEDSRLIAES-STDGKALRIPSKPLHMGY----PQALDEIYKWLED 408 (411)
T ss_dssp TT-SSS-HHHHHHHHHT-BTT-EEEEE-SSSHHHHH----HHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHhc-CCCCceeecCCCccccch----HHHHHHHHHHHHH
Confidence 99999999999888885 46677777775 4 5443 3555666667654
No 88
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.51 E-value=5.8e-13 Score=117.29 Aligned_cols=105 Identities=14% Similarity=0.059 Sum_probs=70.5
Q ss_pred CCCeEEEEecCCCCCCchh---hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC-------
Q 015550 35 GPTKVILITGLAGTHDAWG---PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK------- 104 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~---~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~------- 104 (405)
..|.||++||.+++...|. .+...+.+ .||.|+++|.+|++.+.....
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~----------------------~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~ 69 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADR----------------------YGFVLVAPEQTSYNSSNNCWDWFFTHHR 69 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHh----------------------CCeEEEecCCcCccccCCCCCCCCcccc
Confidence 4578999999998876654 23333332 399999999999875432100
Q ss_pred -CCCCCHHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 105 -KTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 105 -~~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
.......++.+.+..+.+..++ ++++|+||||||.+++.++.++|+++.+++.+++.
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 70 ARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred CCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 0011122222222222333333 58999999999999999999999999999988876
No 89
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.50 E-value=3.7e-12 Score=118.07 Aligned_cols=206 Identities=20% Similarity=0.199 Sum_probs=113.7
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC-CCCCCC-----------
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR-SSVPVK----------- 104 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~-S~~~~~----------- 104 (405)
|.||.+||.++....|...+..-.. ||.|+.+|.||+|. +.....
T Consensus 84 Pavv~~hGyg~~~~~~~~~~~~a~~-----------------------G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~ 140 (320)
T PF05448_consen 84 PAVVQFHGYGGRSGDPFDLLPWAAA-----------------------GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHIT 140 (320)
T ss_dssp EEEEEE--TT--GGGHHHHHHHHHT-----------------------T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTT
T ss_pred CEEEEecCCCCCCCCcccccccccC-----------------------CeEEEEecCCCCCCCCCCccccCCCCCccHHh
Confidence 5789999999998777666554444 99999999999993 311100
Q ss_pred ------CCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 105 ------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 105 ------~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
...+-...+..|+...++.+ +.+++.+.|.|+||.+++.+|+..| +|++++...|....+ .
T Consensus 141 ~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~------~ 213 (320)
T PF05448_consen 141 RGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDF------R 213 (320)
T ss_dssp TTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSH------H
T ss_pred cCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccch------h
Confidence 11122334556666666554 2358999999999999999999986 799999988763110 0
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhC---CC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG---SS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
.. ........+ ...+..++. .. ...+...+. ..
T Consensus 214 ~~-----~~~~~~~~~-------------y~~~~~~~~~~d~~~~~~~~v~~~-L~------------------------ 250 (320)
T PF05448_consen 214 RA-----LELRADEGP-------------YPEIRRYFRWRDPHHEREPEVFET-LS------------------------ 250 (320)
T ss_dssp HH-----HHHT--STT-------------THHHHHHHHHHSCTHCHHHHHHHH-HH------------------------
T ss_pred hh-----hhcCCcccc-------------HHHHHHHHhccCCCcccHHHHHHH-Hh------------------------
Confidence 00 000000000 000111111 10 111111110 11
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHH-HHHHHHHHHh
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEV-NQALIDLIKA 320 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v-~~~i~~fl~~ 320 (405)
..|.....+.|+|||++-.|-.|.++||...-...+.+...+++.+++. ||.... +. .+...+||.+
T Consensus 251 -Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~----~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 251 -YFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGP----EFQEDKQLNFLKE 319 (320)
T ss_dssp -TT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTH----HHHHHHHHHHHHH
T ss_pred -hhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchh----hHHHHHHHHHHhc
Confidence 1123344578899999999999999999999999999977799999997 885433 33 5566677654
No 90
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.50 E-value=2.1e-12 Score=121.93 Aligned_cols=253 Identities=15% Similarity=0.158 Sum_probs=143.8
Q ss_pred CeEEEEecCCCCCCch-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 37 TKVILITGLAGTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 37 p~vvllHG~~~~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
|+||++..+.++.... +.+++.|.. |+.|+..|+..-+..+... ..++++++++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-----------------------g~dVYl~DW~~p~~vp~~~--~~f~ldDYi~ 157 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-----------------------DHDVYITDWVNARMVPLSA--GKFDLEDYID 157 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-----------------------CCcEEEEeCCCCCCCchhc--CCCCHHHHHH
Confidence 6799999988655433 456666665 9999999998777553333 3789999999
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-----CcccceEEEeccCCCCCCCCccchhH-----HHHHHHHHhhc
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVTGGGFQCCPKLDLQ-----TLSIAIRFFRA 185 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 185 (405)
-+.++++++|.+ ++++|+|+||..++.+++.. |++++++++++++...-. .|..... .+.........
T Consensus 158 ~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~-~p~~v~~~a~~~~i~~~~~~~i~ 235 (406)
T TIGR01849 158 YLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA-SPTVVNELAREKPIEWFQHNVIM 235 (406)
T ss_pred HHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC-CCchHHHHhhcccHHHHHHHhhh
Confidence 999999999977 99999999999977766654 678999999998753221 1111000 00111111100
Q ss_pred c------------Chhhhhcc-----Cccccc--CHhHHHhhhCCCchhHH----HHHHHHhhhhhccccCcccchhhhH
Q 015550 186 K------------TPEKRAAV-----DLDTHY--SQEYLEEYVGSSTRRAI----LYQEYVKGISATGMQSNYGFDGQIH 242 (405)
Q Consensus 186 ~------------~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
. .+...... ....+. ...++............ .+++|.....-++ --+...+.
T Consensus 236 ~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpg----e~y~~~v~ 311 (406)
T TIGR01849 236 RVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTA----EFYLQTID 311 (406)
T ss_pred ccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcH----HHHHHHHH
Confidence 0 01000000 000000 00111222211111111 1111111111110 00111111
Q ss_pred Hhhh-cccChh------hhhhhhhcC-CcEEEEeecCCccCCHHHHHHHHHHh---C-CCeEEEEc-CCCcccccc---C
Q 015550 243 ACWM-HKMTQK------DIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKL---Y-PVARMIDL-PGGHLVSHE---R 306 (405)
Q Consensus 243 ~~~~-~~~~~~------~~~~l~~i~-~Pvlvi~G~~D~~~~~~~~~~l~~~l---~-~~~~l~~~-~ggH~~~~e---~ 306 (405)
..+. +.+... ..-.+++|+ +|+|.+.|++|.|+|+..+..+.+.+ . .+.+..+. ++||...+. -
T Consensus 312 ~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~ 391 (406)
T TIGR01849 312 VVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRF 391 (406)
T ss_pred HHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhh
Confidence 1111 111111 112457888 99999999999999999999888863 2 23445555 459987764 3
Q ss_pred HHHHHHHHHHHHHh
Q 015550 307 TEEVNQALIDLIKA 320 (405)
Q Consensus 307 p~~v~~~i~~fl~~ 320 (405)
.+++...|.+||.+
T Consensus 392 ~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 392 REEIYPLVREFIRR 405 (406)
T ss_pred hhhhchHHHHHHHh
Confidence 56899999999975
No 91
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.49 E-value=5e-13 Score=118.26 Aligned_cols=176 Identities=21% Similarity=0.153 Sum_probs=114.5
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC-CCCCCCCCC--C----
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR-SSVPVKKTE--Y---- 108 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~-S~~~~~~~~--~---- 108 (405)
.|.||++|++.|-....+.+++.|++ +||.|+++|+-+-.. ......... +
T Consensus 14 ~~~Vvv~~d~~G~~~~~~~~ad~lA~----------------------~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~ 71 (218)
T PF01738_consen 14 RPAVVVIHDIFGLNPNIRDLADRLAE----------------------EGYVVLAPDLFGGRGAPPSDPEEAFAAMRELF 71 (218)
T ss_dssp EEEEEEE-BTTBS-HHHHHHHHHHHH----------------------TT-EEEEE-CCCCTS--CCCHHCHHHHHHHCH
T ss_pred CCEEEEEcCCCCCchHHHHHHHHHHh----------------------cCCCEEecccccCCCCCccchhhHHHHHHHHH
Confidence 46899999998877667778888887 599999999865443 111110000 0
Q ss_pred --CHHHHHHHHHHHHHHh---C---CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHH
Q 015550 109 --TTKIMAKDVIALMDHL---G---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (405)
Q Consensus 109 --~~~~~~~dl~~~l~~l---~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (405)
..+...+++.+.++.+ . .+++.++|+|+||.+++.+|... +.+++.|..-+..
T Consensus 72 ~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~------------------ 132 (218)
T PF01738_consen 72 APRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGS------------------ 132 (218)
T ss_dssp HHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SS------------------
T ss_pred hhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCC------------------
Confidence 1244566776666665 2 35899999999999999999887 5799888876510
Q ss_pred HHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc
Q 015550 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260 (405)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 260 (405)
..........++
T Consensus 133 --------------------------------------------------------------------~~~~~~~~~~~~ 144 (218)
T PF01738_consen 133 --------------------------------------------------------------------PPPPPLEDAPKI 144 (218)
T ss_dssp --------------------------------------------------------------------SGGGHHHHGGG-
T ss_pred --------------------------------------------------------------------CCCcchhhhccc
Confidence 001112334567
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccC--------HHHHHHHHHHHHHh
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHER--------TEEVNQALIDLIKA 320 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~--------p~~v~~~i~~fl~~ 320 (405)
++|+++++|++|..++.+..+.+.+.+ ....++++++| +|.+.... .++..+.+.+||++
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 799999999999999999878777776 56789999999 99776542 23455666777754
No 92
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.48 E-value=2e-12 Score=108.78 Aligned_cols=155 Identities=23% Similarity=0.297 Sum_probs=102.8
Q ss_pred EEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 39 VILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 39 vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
|+++||++++. +.|.+..+.-.+ ..++|-..|+ + .-+.+++.+.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~----------------------~~~~V~~~~~------~------~P~~~~W~~~l 46 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLE----------------------NSVRVEQPDW------D------NPDLDEWVQAL 46 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHT----------------------TSEEEEEC--------T------S--HHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCC----------------------CCeEEecccc------C------CCCHHHHHHHH
Confidence 68999999876 568777654433 1477777665 1 33678888888
Q ss_pred HHHHHHhCCccEEEEEEChhHHHHHHHH-HhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCc
Q 015550 118 IALMDHLGWKQAHVFGHSMGAMIACKLA-AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196 (405)
Q Consensus 118 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (405)
.+.+..+. +++++||||+|+..++.++ .....+|.+++|+++.-.. .. ....
T Consensus 47 ~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~-------~~-----------~~~~-------- 99 (171)
T PF06821_consen 47 DQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD-------DP-----------EPFP-------- 99 (171)
T ss_dssp HHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG-------CH-----------HCCT--------
T ss_pred HHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc-------cc-----------cchh--------
Confidence 88887664 6799999999999999999 7778899999999986210 00 0000
Q ss_pred ccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCC
Q 015550 197 DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ 276 (405)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~ 276 (405)
..+.. ..... ...+.+|.++|.+++|+++|
T Consensus 100 ------~~~~~-----------------------------------------f~~~p---~~~l~~~~~viaS~nDp~vp 129 (171)
T PF06821_consen 100 ------PELDG-----------------------------------------FTPLP---RDPLPFPSIVIASDNDPYVP 129 (171)
T ss_dssp ------CGGCC-----------------------------------------CTTSH---CCHHHCCEEEEEETTBSSS-
T ss_pred ------hhccc-----------------------------------------cccCc---ccccCCCeEEEEcCCCCccC
Confidence 00000 00000 12234778999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEcCC-CccccccC
Q 015550 277 ICYARRLAEKLYPVARMIDLPG-GHLVSHER 306 (405)
Q Consensus 277 ~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~ 306 (405)
.+.++++++++ +++++.+++ ||+...+.
T Consensus 130 ~~~a~~~A~~l--~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 130 FERAQRLAQRL--GAELIILGGGGHFNAASG 158 (171)
T ss_dssp HHHHHHHHHHH--T-EEEEETS-TTSSGGGT
T ss_pred HHHHHHHHHHc--CCCeEECCCCCCcccccC
Confidence 99999999998 789999998 99987653
No 93
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.47 E-value=3.2e-12 Score=115.86 Aligned_cols=111 Identities=21% Similarity=0.239 Sum_probs=92.8
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC----CCCCCCCHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP----VKKTEYTTK 111 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~----~~~~~~~~~ 111 (405)
++.+|+|+|++|-.+.|.++++.|.+.+. ..+.|+++.+.||-.++.. .....++++
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~-------------------~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~ 62 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLN-------------------PQFEILGISHAGHSTSPSNSKFSPNGRLFSLQ 62 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCC-------------------CCCeeEEecCCCCcCCcccccccCCCCccCHH
Confidence 34689999999999999999999986432 3899999999999887655 134688999
Q ss_pred HHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCCCC
Q 015550 112 IMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGF 165 (405)
Q Consensus 112 ~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~ 165 (405)
++++...++++.+- ..+++++|||.|+++++++..+.+ .+|.+++++-|+....
T Consensus 63 ~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 63 DQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 99998888887663 247999999999999999999999 7899999999885443
No 94
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.47 E-value=1.4e-12 Score=131.75 Aligned_cols=126 Identities=24% Similarity=0.256 Sum_probs=97.5
Q ss_pred CCCcccccCCEEEEEEEccCCC----------CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGP----------TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~----------p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (405)
.|..++..++.+|.|...|.|. |+|||+||++++.+.|..+++.|.+ +
T Consensus 418 vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~----------------------~ 475 (792)
T TIGR03502 418 VPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAA----------------------A 475 (792)
T ss_pred cceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHh----------------------C
Confidence 4556677788888887766543 4799999999999999999999986 4
Q ss_pred CeEEEEecCCCCCCCCCC----------CCCCC-----------CCHHHHHHHHHHHHHHhC----------------Cc
Q 015550 85 GIEVCAFDNRGMGRSSVP----------VKKTE-----------YTTKIMAKDVIALMDHLG----------------WK 127 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~----------~~~~~-----------~~~~~~~~dl~~~l~~l~----------------~~ 127 (405)
||+|+++|+||||.|... ..... .++.+.+.|+..+...++ ..
T Consensus 476 Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~ 555 (792)
T TIGR03502 476 GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGS 555 (792)
T ss_pred CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 999999999999999443 11111 267899999999988886 24
Q ss_pred cEEEEEEChhHHHHHHHHHhCCc-----------ccceEEEeccCC
Q 015550 128 QAHVFGHSMGAMIACKLAAMVPE-----------RVLSLALLNVTG 162 (405)
Q Consensus 128 ~v~lvGhS~Gg~ia~~~a~~~p~-----------~v~~lvl~~~~~ 162 (405)
+++++||||||+++..++..... .+....+.+|.+
T Consensus 556 ~V~~lGHSLGgiig~~~~~~an~~~~~~~~~~l~~~~~a~l~~pgG 601 (792)
T TIGR03502 556 KVSFLGHSLGGIVGTSFIAYANTPLGSPTADALYAVNAASLQNPGG 601 (792)
T ss_pred cEEEEecCHHHHHHHHHHHhcCccccCCccccccccceeeeecCCc
Confidence 89999999999999999975322 345666666554
No 95
>PRK10162 acetyl esterase; Provisional
Probab=99.44 E-value=9.8e-12 Score=116.24 Aligned_cols=105 Identities=18% Similarity=0.140 Sum_probs=73.0
Q ss_pred CCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 35 GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 35 ~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
+.|+||++||.+ ++.+.|..++..|+.. .|+.|+.+|+|.......+.. ..+..
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~Vv~vdYrlape~~~p~~--~~D~~ 136 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASY---------------------SGCTVIGIDYTLSPEARFPQA--IEEIV 136 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHH---------------------cCCEEEEecCCCCCCCCCCCc--HHHHH
Confidence 457899999977 5666788888888762 389999999996543322211 11222
Q ss_pred HHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhC------CcccceEEEeccCC
Q 015550 112 IMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVTG 162 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~ 162 (405)
+..+.+.+..+.+++ ++++|+|+|+||.+|+.++.+. +.++.+++++.+..
T Consensus 137 ~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 137 AVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 233344444445554 5899999999999999998753 35789999998763
No 96
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.42 E-value=1.3e-11 Score=111.14 Aligned_cols=128 Identities=25% Similarity=0.362 Sum_probs=106.8
Q ss_pred cccCCEEEEEEEccCC-------CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 20 LNDNGIKIFYRTYGRG-------PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~-------~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
.++.|.+|||...-+. .-|||++|||+|+-..+..+++.|...-+ ++..-+--|.||++.
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~-------------hg~~~d~~FEVI~PS 195 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKR-------------HGNESDYAFEVIAPS 195 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccc-------------cCCccceeEEEeccC
Confidence 6789999999776532 12699999999999999999999987311 111122368999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+||+|.|+.+.. ..++..+.|.-+..++-.+|..++.+-|..||+.|+..+|..+|++|.|+-+-.+.
T Consensus 196 lPGygwSd~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 196 LPGYGWSDAPSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred CCCcccCcCCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 999999998876 58889999999999999999999999999999999999999999999988665443
No 97
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.39 E-value=1.6e-11 Score=101.09 Aligned_cols=176 Identities=22% Similarity=0.283 Sum_probs=117.5
Q ss_pred EEEEEcc-CCCCeEEEEecCC---CCC--CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 27 IFYRTYG-RGPTKVILITGLA---GTH--DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 27 i~y~~~G-~~~p~vvllHG~~---~~~--~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
..|.... +..|..|++|--+ ++. ..-..+++.|.+ .||.++.||+||.|+|.
T Consensus 18 ~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~----------------------~G~atlRfNfRgVG~S~ 75 (210)
T COG2945 18 GRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVK----------------------RGFATLRFNFRGVGRSQ 75 (210)
T ss_pred eccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHh----------------------CCceEEeeccccccccc
Confidence 3344333 3456677787533 222 234456666776 59999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh---CCc-c-EEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 101 VPVKKTEYTTKIMAKDVIALMDHL---GWK-Q-AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~l---~~~-~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
..-.. ... -.+|+.+.++.+ ..+ + ..+.|+|+|++|+..+|.+.|+ ....+.+.+...
T Consensus 76 G~fD~-GiG---E~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~------------ 138 (210)
T COG2945 76 GEFDN-GIG---ELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN------------ 138 (210)
T ss_pred CcccC-Ccc---hHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC------------
Confidence 76542 222 234444444444 222 3 3688999999999999999875 444454444310
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
.....
T Consensus 139 ---------------------------------------------------------------------------~~dfs 143 (210)
T COG2945 139 ---------------------------------------------------------------------------AYDFS 143 (210)
T ss_pred ---------------------------------------------------------------------------chhhh
Confidence 00001
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.+....+|.++|+|+.|.+++....-++++. ...+++.+++ +|++ ..+-+++.+.|.+|+.
T Consensus 144 ~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF-~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 144 FLAPCPSPGLVIQGDADDVVDLVAVLKWQES--IKITVITIPGADHFF-HGKLIELRDTIADFLE 205 (210)
T ss_pred hccCCCCCceeEecChhhhhcHHHHHHhhcC--CCCceEEecCCCcee-cccHHHHHHHHHHHhh
Confidence 1234458999999999999999888888885 4567777888 8887 4566789999999985
No 98
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=1.9e-11 Score=105.91 Aligned_cols=208 Identities=19% Similarity=0.171 Sum_probs=129.5
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC----CCC--------
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV----PVK-------- 104 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~----~~~-------- 104 (405)
|.||-.||+++....|..+...-.. ||.|+.+|-||.|.|+. ++.
T Consensus 84 P~vV~fhGY~g~~g~~~~~l~wa~~-----------------------Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~m 140 (321)
T COG3458 84 PAVVQFHGYGGRGGEWHDMLHWAVA-----------------------GYAVFVMDVRGQGSSSQDTADPPGGPSDPGFM 140 (321)
T ss_pred ceEEEEeeccCCCCCcccccccccc-----------------------ceeEEEEecccCCCccccCCCCCCCCcCCcee
Confidence 6799999999999988777765554 99999999999998833 111
Q ss_pred -------CCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 105 -------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 105 -------~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
+..|-......|+..+++.+ ..+++.+.|.|.||.+++..|+..| +|++++++-|....+.-.
T Consensus 141 trGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~--- 216 (321)
T COG3458 141 TRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRA--- 216 (321)
T ss_pred EeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhh---
Confidence 11222223444554444433 4578999999999999999998876 899999887653221100
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
+ .....-....+..++......+...-+... ..
T Consensus 217 -----------i-----------~~~~~~~ydei~~y~k~h~~~e~~v~~TL~-------------------------yf 249 (321)
T COG3458 217 -----------I-----------ELATEGPYDEIQTYFKRHDPKEAEVFETLS-------------------------YF 249 (321)
T ss_pred -----------e-----------eecccCcHHHHHHHHHhcCchHHHHHHHHh-------------------------hh
Confidence 0 000000001111111111100100001010 01
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+.......+++|+|+..|--|.++||..+-..++++...+++.+++- +|.-. |.-..+.+..|++..
T Consensus 250 D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l 317 (321)
T COG3458 250 DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLKIL 317 (321)
T ss_pred hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC---cchhHHHHHHHHHhh
Confidence 22233467889999999999999999999999999877788888886 87443 334444555666543
No 99
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=4.4e-11 Score=106.34 Aligned_cols=176 Identities=22% Similarity=0.165 Sum_probs=130.5
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC-CCCCCCC-CC---C-----
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM-GRSSVPV-KK---T----- 106 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~-G~S~~~~-~~---~----- 106 (405)
|.||++|+..+-....+.+++.|+. +||.|+++|+-+. |.+.... .. .
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~----------------------~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~ 85 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAK----------------------AGYVVLAPDLYGRQGDPTDIEDEPAELETGLVE 85 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHh----------------------CCcEEEechhhccCCCCCcccccHHHHhhhhhc
Confidence 7899999999999999999999988 5999999999763 3332211 00 0
Q ss_pred CCCHHHHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHH
Q 015550 107 EYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (405)
..+..+...|+.+.++.|. .++|.++|+||||.+++.++...| .|++.|..-+.....
T Consensus 86 ~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~--------------- 149 (236)
T COG0412 86 RVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD--------------- 149 (236)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC---------------
Confidence 1233677788888888772 357999999999999999999987 788888877652100
Q ss_pred HHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc
Q 015550 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260 (405)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 260 (405)
......++
T Consensus 150 ------------------------------------------------------------------------~~~~~~~~ 157 (236)
T COG0412 150 ------------------------------------------------------------------------DTADAPKI 157 (236)
T ss_pred ------------------------------------------------------------------------cccccccc
Confidence 00112467
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCC-CccccccC-----------HHHHHHHHHHHHHhhc
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHER-----------TEEVNQALIDLIKASE 322 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~e~-----------p~~v~~~i~~fl~~~~ 322 (405)
++|+|+++|+.|..+|......+.+.+. ...++.++++ .|.++-++ .+.-.+.+.+|+++..
T Consensus 158 ~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 158 KVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred cCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999988888887762 2578899998 78776332 2456677788887654
No 100
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.31 E-value=3.4e-11 Score=101.86 Aligned_cols=254 Identities=17% Similarity=0.164 Sum_probs=144.6
Q ss_pred cccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..-..||+.+....+.. .+..+++-.+.+.....|++++..+.+ +||.|+.+|+|
T Consensus 9 ~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~----------------------~Gf~Vlt~dyR 66 (281)
T COG4757 9 HLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAK----------------------AGFEVLTFDYR 66 (281)
T ss_pred ccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhc----------------------cCceEEEEecc
Confidence 34455788777665543 222355555666666778889888887 59999999999
Q ss_pred CCCCCCCCCC-CCCCCHHHHHH-HHHHHHHHhC----CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 95 GMGRSSVPVK-KTEYTTKIMAK-DVIALMDHLG----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 95 G~G~S~~~~~-~~~~~~~~~~~-dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
|.|.|..... +..+.+.|++. |+.+.++.++ -.+.+.+|||+||.+...+.. +| ++.+....++....-..+
T Consensus 67 G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m 144 (281)
T COG4757 67 GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWM 144 (281)
T ss_pred cccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEeccccccccch
Confidence 9999975543 34577777774 6766666553 358999999999998776654 44 555555554432111001
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
..... ........ ........+....-..+++.. ......+.++......+. +.+. .
T Consensus 145 ~~~~~------l~~~~l~~----lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~----y~fd--------d 202 (281)
T COG4757 145 GLRER------LGAVLLWN----LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPR----YYFD--------D 202 (281)
T ss_pred hhhhc------ccceeecc----ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCcc----cccc--------C
Confidence 10000 00000000 000000111111111111111 122233334333322111 0000 0
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeE--EEEcC---C--CccccccCH-HHHHHHHHHHH
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR--MIDLP---G--GHLVSHERT-EEVNQALIDLI 318 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~--l~~~~---g--gH~~~~e~p-~~v~~~i~~fl 318 (405)
.......+....+++||..+...+|..+|+...+.+++-. +|+. ++.++ + ||+-...++ |.+.+.+.+|+
T Consensus 203 p~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y-~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 203 PAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFY-RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhh-hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 0111234556778899999999999999999999999865 5554 44443 3 899988877 77777776664
No 101
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.31 E-value=1.3e-10 Score=109.63 Aligned_cols=279 Identities=17% Similarity=0.180 Sum_probs=155.1
Q ss_pred cccCCEEEEEEE--cc-CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 20 LNDNGIKIFYRT--YG-RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 20 ~~~~g~~i~y~~--~G-~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+.||+-+.... .+ ..+|+|++.||+.+++..|-...+ +.+++-.|+++||.|+.-+.||-
T Consensus 54 ~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p----------------~~sLaf~LadaGYDVWLgN~RGn 117 (403)
T KOG2624|consen 54 TTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGP----------------EQSLAFLLADAGYDVWLGNNRGN 117 (403)
T ss_pred EccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCc----------------cccHHHHHHHcCCceeeecCcCc
Confidence 455676443322 23 345789999999999999854321 11223344447999999999997
Q ss_pred CCCCC--------CCCCCCCCHHHHHH-HHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc---ccceEEEecc
Q 015550 97 GRSSV--------PVKKTEYTTKIMAK-DVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNV 160 (405)
Q Consensus 97 G~S~~--------~~~~~~~~~~~~~~-dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~ 160 (405)
-.|.. ......+++.+++. |+-+.++++ +.++++.+|||.|+.....++...|+ +|+..++++|
T Consensus 118 ~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 118 TYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAP 197 (403)
T ss_pred ccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecc
Confidence 76642 12235678888765 777777765 66799999999999999999988875 7999999999
Q ss_pred CCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHh-----HHHhhhCCCch---------------------
Q 015550 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQE-----YLEEYVGSSTR--------------------- 214 (405)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--------------------- 214 (405)
.......... .......+.................... +..........
T Consensus 198 ~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n 272 (403)
T KOG2624|consen 198 AAFPKHIKSL-----LNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWN 272 (403)
T ss_pred hhhhcccccH-----HHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhh
Confidence 8521110000 0000000000000000000000000000 00000000000
Q ss_pred ---------------hHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHH
Q 015550 215 ---------------RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY 279 (405)
Q Consensus 215 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~ 279 (405)
.......+.....+ +....+++....+.... .......-.+..+++||.+.+|++|.++.++.
T Consensus 273 ~~~~~~~~~h~pagtSvk~~~H~~Q~~~s-~~f~~yD~G~~~N~~~Y-~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~D 350 (403)
T KOG2624|consen 273 TTLLPVYLAHLPAGTSVKNIVHWAQIVRS-GKFRKYDYGSKRNLKHY-GQSTPPEYDLTNIKVPTALYYGDNDWLADPED 350 (403)
T ss_pred hcccchhhccCCCCccHHHHHHHHHHhcC-CCccccCCCccccHhhc-CCCCCCCCCccccccCEEEEecCCcccCCHHH
Confidence 00011111111111 11112222221111111 11122233456779999999999999999999
Q ss_pred HHHHHHHhCCCeEEE---EcCC-Cccccc---cCHHHHHHHHHHHHHhhc
Q 015550 280 ARRLAEKLYPVARMI---DLPG-GHLVSH---ERTEEVNQALIDLIKASE 322 (405)
Q Consensus 280 ~~~l~~~l~~~~~l~---~~~g-gH~~~~---e~p~~v~~~i~~fl~~~~ 322 (405)
.+.+...+ +++... .++. .|+=+. +-++++.+.|.+.++...
T Consensus 351 V~~~~~~~-~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 351 VLILLLVL-PNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHHHhc-ccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 99888876 444332 2677 885553 568999999999998765
No 102
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.30 E-value=4.5e-11 Score=110.28 Aligned_cols=255 Identities=12% Similarity=0.097 Sum_probs=141.7
Q ss_pred CCeEEEEecCCCCCCchh-----hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 36 PTKVILITGLAGTHDAWG-----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~-----~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
++|+|++|-+-..-..|+ .++..|.+ +|+.|+.+|+++-..+.......+|-.
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~----------------------~g~~vfvIsw~nPd~~~~~~~~edYi~ 164 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLE----------------------QGLDVFVISWRNPDASLAAKNLEDYIL 164 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHH----------------------cCCceEEEeccCchHhhhhccHHHHHH
Confidence 457999999887766654 45666665 699999999998777754332222323
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcc-cceEEEeccCCCCCCCCcc--c-hhHHHHHHHHHhhc-
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGFQCCPK--L-DLQTLSIAIRFFRA- 185 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~- 185 (405)
+.+.+.+..+.+..+.++|.++|||.||+++..+++.++.+ |++++++.+........+. + ....+.....-...
T Consensus 165 e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~ 244 (445)
T COG3243 165 EGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQK 244 (445)
T ss_pred HHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhc
Confidence 34445555666667889999999999999999999988887 9999998876422111110 0 11111111100000
Q ss_pred -cChhhh-----hccCcccccCHhHHHhhhCCC---------------chhHHHHHHHHhhhhhccccCcccchhhhHHh
Q 015550 186 -KTPEKR-----AAVDLDTHYSQEYLEEYVGSS---------------TRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (405)
Q Consensus 186 -~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (405)
..+... ............++..+.... ......+.+|.+.+-..+......
T Consensus 245 g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~-------- 316 (445)
T COG3243 245 GILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGG-------- 316 (445)
T ss_pred cCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccc--------
Confidence 000000 000000011112222222111 112222222222111111000000
Q ss_pred hhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCH-H----H----HHHHHH
Q 015550 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERT-E----E----VNQALI 315 (405)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p-~----~----v~~~i~ 315 (405)
.......-.+.+++||++++.|++|.|+|.+......+.+...++++..++||....-+| . . ......
T Consensus 317 ---~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~ 393 (445)
T COG3243 317 ---LEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAE 393 (445)
T ss_pred ---eEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHH
Confidence 000111234688999999999999999999999988887745578888888997765432 1 1 223567
Q ss_pred HHHHhhcC
Q 015550 316 DLIKASEK 323 (405)
Q Consensus 316 ~fl~~~~~ 323 (405)
+|+.+...
T Consensus 394 ~Wl~~a~~ 401 (445)
T COG3243 394 AWLSGAKE 401 (445)
T ss_pred HHHHhhcc
Confidence 77776554
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.30 E-value=2.9e-10 Score=96.85 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=66.8
Q ss_pred eEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 38 KVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.|+++|||.++..+... +.+.+.+.. ....+.++|++ .+.++..+
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~~~~~~~--------------------~~~~~~~p~l~-------------~~p~~a~~ 47 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQYFAEHG--------------------PDIQYPCPDLP-------------PFPEEAIA 47 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHHHHHHhC--------------------CCceEECCCCC-------------cCHHHHHH
Confidence 38999999999988654 234444310 14567777654 35666778
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+.++++....+.+.|+|.||||..|..+|.+++ +++ ||+||..
T Consensus 48 ~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 48 QLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred HHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCC
Confidence 8889999888777999999999999999999985 444 9999873
No 104
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.29 E-value=4.6e-11 Score=100.88 Aligned_cols=209 Identities=19% Similarity=0.143 Sum_probs=133.0
Q ss_pred CCcccccCCccccCCCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCC
Q 015550 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVES 79 (405)
Q Consensus 1 mp~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 79 (405)
||.|....+........+..+++|..-+..-.-..+..||++--..|.... -+..+..++.
T Consensus 4 ~~cc~~~~~~~~~~~~g~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~------------------ 65 (242)
T KOG3043|consen 4 MPCCPDGKIAAEVDDGGREEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVAL------------------ 65 (242)
T ss_pred CCCCCCcccccccCCCCceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhc------------------
Confidence 566666533333223345566677665544333344356666665554443 5556666665
Q ss_pred CCCCCCeEEEEecCC-CCCCCCC-CCC-----CCCCCHHHHHHHHHHHHHHh---C-CccEEEEEEChhHHHHHHHHHhC
Q 015550 80 GDGGAGIEVCAFDNR-GMGRSSV-PVK-----KTEYTTKIMAKDVIALMDHL---G-WKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 80 ~l~~~g~~Vi~~D~~-G~G~S~~-~~~-----~~~~~~~~~~~dl~~~l~~l---~-~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
.||.|+.+|+- |--.|.. ... ....+..-..+++..+++.+ + .++|.++|.||||.++..+....
T Consensus 66 ----~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~ 141 (242)
T KOG3043|consen 66 ----NGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKD 141 (242)
T ss_pred ----CCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccc
Confidence 49999999975 3111111 000 01223333445555555544 4 57899999999999999988887
Q ss_pred CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhh
Q 015550 149 PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISA 228 (405)
Q Consensus 149 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (405)
| .+.+.+..-|..
T Consensus 142 ~-~f~a~v~~hps~------------------------------------------------------------------ 154 (242)
T KOG3043|consen 142 P-EFDAGVSFHPSF------------------------------------------------------------------ 154 (242)
T ss_pred h-hheeeeEecCCc------------------------------------------------------------------
Confidence 7 677777776651
Q ss_pred ccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC----eEEEEcCC-Ccccc
Q 015550 229 TGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV----ARMIDLPG-GHLVS 303 (405)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~----~~l~~~~g-gH~~~ 303 (405)
...+.+..+++|||++.|+.|.++|++....+.+.+..+ .++.+++| +|-..
T Consensus 155 -----------------------~d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 155 -----------------------VDSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred -----------------------CChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 012345677899999999999999999988888877332 35889999 99666
Q ss_pred c-----cCH------HHHHHHHHHHHHhh
Q 015550 304 H-----ERT------EEVNQALIDLIKAS 321 (405)
Q Consensus 304 ~-----e~p------~~v~~~i~~fl~~~ 321 (405)
. +.| |+..+.+.+|++..
T Consensus 212 ~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 212 ARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 3 223 45566667776653
No 105
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.28 E-value=9.3e-12 Score=90.30 Aligned_cols=76 Identities=25% Similarity=0.399 Sum_probs=65.2
Q ss_pred CEEEEEEEccCCC---CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 24 GIKIFYRTYGRGP---TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 24 g~~i~y~~~G~~~---p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
|.+|+|+.+-+.+ .+|+++||++.++..|..+++.|++ +||.|+++|+||||.|.
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~----------------------~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAE----------------------QGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHh----------------------CCCEEEEECCCcCCCCC
Confidence 5789999987633 4799999999999999999999998 59999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH
Q 015550 101 VPVKKTEYTTKIMAKDVIALMD 122 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~ 122 (405)
.... ..-+++++++|+..+++
T Consensus 59 g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 59 GKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred Cccc-ccCCHHHHHHHHHHHhC
Confidence 6554 35589999999998864
No 106
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.28 E-value=4.3e-10 Score=101.16 Aligned_cols=243 Identities=14% Similarity=0.145 Sum_probs=90.3
Q ss_pred EEEEEEEccC-CCCeEEEEecCCCCC---CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC----CC
Q 015550 25 IKIFYRTYGR-GPTKVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GM 96 (405)
Q Consensus 25 ~~i~y~~~G~-~~p~vvllHG~~~~~---~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~----G~ 96 (405)
..+.|...+. .+..||||.|++..- .+...+++.|.+ .+|.|+-+-++ |+
T Consensus 21 ~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~----------------------~~wsl~q~~LsSSy~G~ 78 (303)
T PF08538_consen 21 VAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEE----------------------TGWSLFQVQLSSSYSGW 78 (303)
T ss_dssp EEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-----------------------TT-EEEEE--GGGBTTS
T ss_pred eEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhcc----------------------CCeEEEEEEecCccCCc
Confidence 3444444443 334799999988754 345667777765 39999999875 45
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHh--------CCccEEEEEEChhHHHHHHHHHhCC-----cccceEEEeccCCC
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHL--------GWKQAHVFGHSMGAMIACKLAAMVP-----ERVLSLALLNVTGG 163 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l--------~~~~v~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~ 163 (405)
|.+ ++++-++||.++++++ +.++|+|+|||.|+.-++.|+.... ..|++.||-+|...
T Consensus 79 G~~---------SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 79 GTS---------SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp -S-----------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred Ccc---------hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 544 6777777777777755 2468999999999999999988752 56999999999864
Q ss_pred CCCCCccchh-----HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccch
Q 015550 164 GFQCCPKLDL-----QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238 (405)
Q Consensus 164 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (405)
.......... .....+............. ..++...... ..+....++.......
T Consensus 150 REa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l--------p~~~~~~~~~---~~PiTA~Rf~SL~s~~--------- 209 (303)
T PF08538_consen 150 REAILNFLGEREAYEELVALAKELIAEGKGDEIL--------PREFTPLVFY---DTPITAYRFLSLASPG--------- 209 (303)
T ss_dssp TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG------------GGTTT----SS---HHHHHT-S-SS---------
T ss_pred hhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee--------eccccccccC---CCcccHHHHHhccCCC---------
Confidence 3322221111 1112222221111111110 0011111000 0011111222111111
Q ss_pred hhhHHhhhcccChhh-hhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhC---C----CeEEEEcCC-CccccccCH-
Q 015550 239 GQIHACWMHKMTQKD-IQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLY---P----VARMIDLPG-GHLVSHERT- 307 (405)
Q Consensus 239 ~~~~~~~~~~~~~~~-~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~---~----~~~l~~~~g-gH~~~~e~p- 307 (405)
.-..++...+..+. .+.++.+++|+|++.+.+|..+|...- +.+.+++. + ...--+++| +|.+--+..
T Consensus 210 -gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~ 288 (303)
T PF08538_consen 210 -GDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQA 288 (303)
T ss_dssp -HHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------------------------------------------
T ss_pred -CcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccc
Confidence 01112222233333 356788999999999999999997432 33444431 1 112347888 898875433
Q ss_pred ---HHHHHHHHHHHH
Q 015550 308 ---EEVNQALIDLIK 319 (405)
Q Consensus 308 ---~~v~~~i~~fl~ 319 (405)
+.+.+.+..||+
T Consensus 289 ~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 289 EAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------
T ss_pred cccccccccccccCC
Confidence 246777777764
No 107
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.27 E-value=7e-11 Score=131.12 Aligned_cols=102 Identities=18% Similarity=0.135 Sum_probs=87.9
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
|.+ ++++|+||++++...|..+.+.|.. ++.|+++|.+|+|.+.. ..+++++
T Consensus 1066 ~~~-~~l~~lh~~~g~~~~~~~l~~~l~~-----------------------~~~v~~~~~~g~~~~~~----~~~~l~~ 1117 (1296)
T PRK10252 1066 GDG-PTLFCFHPASGFAWQFSVLSRYLDP-----------------------QWSIYGIQSPRPDGPMQ----TATSLDE 1117 (1296)
T ss_pred CCC-CCeEEecCCCCchHHHHHHHHhcCC-----------------------CCcEEEEECCCCCCCCC----CCCCHHH
Confidence 444 5699999999999999999999987 89999999999986531 3579999
Q ss_pred HHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHh---CCcccceEEEeccCC
Q 015550 113 MAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVTG 162 (405)
Q Consensus 113 ~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 162 (405)
+++++.+.++.+.. .+++++||||||.+|..+|.+ .++++..++++++..
T Consensus 1118 la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1118 VCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 99999999988754 489999999999999999986 578899999998753
No 108
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.24 E-value=4.1e-10 Score=116.10 Aligned_cols=221 Identities=13% Similarity=0.095 Sum_probs=120.1
Q ss_pred CCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CccEEEEEEChhH
Q 015550 79 SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG--------------------WKQAHVFGHSMGA 138 (405)
Q Consensus 79 ~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~--------------------~~~v~lvGhS~Gg 138 (405)
++++.+||.|+.+|.||+|.|++... .+. .+..+|..++++-+. ..+|.++|.|+||
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 45556799999999999999987543 222 334455555555443 3589999999999
Q ss_pred HHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHH-Hhhh--CCCchh
Q 015550 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL-EEYV--GSSTRR 215 (405)
Q Consensus 139 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~ 215 (405)
.+++.+|...|..++++|..++.......... ...+.... ...... .....+.. .... ......
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~---------~G~~~~~~--g~~ged--~d~l~~~~~~r~~~~~~~~~~ 416 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRE---------NGLVRAPG--GYQGED--LDVLAELTYSRNLLAGDYLRH 416 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhc---------CCceeccC--CcCCcc--hhhHHHHhhhcccCcchhhcc
Confidence 99999999988899999998765321100000 00000000 000000 00000000 0000 000000
Q ss_pred HHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC---CCeE
Q 015550 216 AILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVAR 292 (405)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~ 292 (405)
...++.+...+....... ......+|.. .+....+.++++|+|+|||.+|..+++..+.++.+.+. ...+
T Consensus 417 ~~~~~~~~~~~~~~~~~~----~~~y~~fW~~---rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkk 489 (767)
T PRK05371 417 NEACEKLLAELTAAQDRK----TGDYNDFWDD---RNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKK 489 (767)
T ss_pred hHHHHHHHhhhhhhhhhc----CCCccHHHHh---CCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeE
Confidence 001111111000000000 0011122322 23345567889999999999999999888888877762 3567
Q ss_pred EEEcCCCcccccc-CHHHHHHHHHHHHHhhc
Q 015550 293 MIDLPGGHLVSHE-RTEEVNQALIDLIKASE 322 (405)
Q Consensus 293 l~~~~ggH~~~~e-~p~~v~~~i~~fl~~~~ 322 (405)
+++.+++|..... .+.++.+.+.+|++...
T Consensus 490 L~l~~g~H~~~~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 490 LFLHQGGHVYPNNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred EEEeCCCccCCCchhHHHHHHHHHHHHHhcc
Confidence 7776779965433 45566777777776553
No 109
>PRK10115 protease 2; Provisional
Probab=99.23 E-value=5.8e-10 Score=114.19 Aligned_cols=209 Identities=17% Similarity=0.136 Sum_probs=127.4
Q ss_pred cccCCEEEEE-EEcc------CCCCeEEEEecCCCCCC--chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 20 LNDNGIKIFY-RTYG------RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 20 ~~~~g~~i~y-~~~G------~~~p~vvllHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.+.||.+|.+ ..+. ...|+||++||..+... .|.+....|.. +||.|+.
T Consensus 422 ~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~----------------------rG~~v~~ 479 (686)
T PRK10115 422 TARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLD----------------------RGFVYAI 479 (686)
T ss_pred ECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHH----------------------CCcEEEE
Confidence 4578888775 3331 13478999999877663 36666666666 4999999
Q ss_pred ecCCCCCCCCC---CC---CCCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 91 FDNRGMGRSSV---PV---KKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 91 ~D~~G~G~S~~---~~---~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+.||-|.-.. .. .....+++|+++.+..+++.= ..+++.+.|.|.||.++..++.++|++++++|...+..
T Consensus 480 ~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 480 VHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred EEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 99998654421 11 111245666665555555431 23589999999999999999999999999999988763
Q ss_pred CCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhH
Q 015550 163 GGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH 242 (405)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
.. ..++.... .........++ +..... . ..+++..
T Consensus 560 D~---------------~~~~~~~~----------~p~~~~~~~e~-G~p~~~-~-~~~~l~~----------------- 594 (686)
T PRK10115 560 DV---------------VTTMLDES----------IPLTTGEFEEW-GNPQDP-Q-YYEYMKS----------------- 594 (686)
T ss_pred hH---------------hhhcccCC----------CCCChhHHHHh-CCCCCH-H-HHHHHHH-----------------
Confidence 11 00100000 00000011111 111111 0 1111111
Q ss_pred HhhhcccChhhhhhhhhcCCc-EEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEc---CC-Ccccc
Q 015550 243 ACWMHKMTQKDIQTIRSAGFL-VSVIHGRHDVIAQICYARRLAEKL---YPVARMIDL---PG-GHLVS 303 (405)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~P-vlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~---~g-gH~~~ 303 (405)
...+..+.+++.| +|+++|.+|.-||+..+.+++.++ ....+++++ ++ ||...
T Consensus 595 --------~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 595 --------YSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred --------cCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 1223344566789 667799999999999999998887 234566666 66 99843
No 110
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.22 E-value=3.4e-09 Score=90.74 Aligned_cols=216 Identities=19% Similarity=0.281 Sum_probs=116.1
Q ss_pred CCEEEEEEEccC------CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 23 ~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
+|.+|+.++.-| ..++||+.+||+-..+.|..++.+|+. .||+|+.+|.-.|
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~----------------------NGFhViRyDsl~H 68 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSA----------------------NGFHVIRYDSLNH 68 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHT----------------------TT--EEEE---B-
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhh----------------------CCeEEEecccccc
Confidence 688888877754 236899999999999999999999998 4999999999877
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 97 -GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 97 -G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
|.|++... ++++....+++..+++.+ |..++.|+.-|+.|-+|+..|.+. .+.-||+.-+.. .-
T Consensus 69 vGlSsG~I~--eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV--------nl 136 (294)
T PF02273_consen 69 VGLSSGDIN--EFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV--------NL 136 (294)
T ss_dssp --------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S---------H
T ss_pred ccCCCCChh--hcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee--------eH
Confidence 88887664 889999999998888776 677899999999999999999854 477777665442 12
Q ss_pred hHHHHHHHHH--hhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc-
Q 015550 173 LQTLSIAIRF--FRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM- 249 (405)
Q Consensus 173 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 249 (405)
+.++.....+ +...........++. +.....+.+.+. |....+
T Consensus 137 r~TLe~al~~Dyl~~~i~~lp~dldfe------------Gh~l~~~vFv~d----------------------c~e~~w~ 182 (294)
T PF02273_consen 137 RDTLEKALGYDYLQLPIEQLPEDLDFE------------GHNLGAEVFVTD----------------------CFEHGWD 182 (294)
T ss_dssp HHHHHHHHSS-GGGS-GGG--SEEEET------------TEEEEHHHHHHH----------------------HHHTT-S
T ss_pred HHHHHHHhccchhhcchhhCCCccccc------------ccccchHHHHHH----------------------HHHcCCc
Confidence 2222222111 100000000000000 000111111111 111111
Q ss_pred -ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh-CCCeEEEEcCC-CccccccCH
Q 015550 250 -TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERT 307 (405)
Q Consensus 250 -~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e~p 307 (405)
.......++.+.+|++.+++++|.++......++...+ .+.++++.++| +|-+. |++
T Consensus 183 ~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 183 DLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp SHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred cchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 12334567788999999999999999998888888766 35688999999 89874 444
No 111
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.19 E-value=3.1e-09 Score=103.75 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=83.1
Q ss_pred CEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC-CCC
Q 015550 24 GIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-GMG 97 (405)
Q Consensus 24 g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~-G~G 97 (405)
+.+++|.-... ..|.||+++|.+|++..+..+.+ ...-. .+.|...... -..---+..+++.+|.| |+|
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E-~GP~~--i~~~~~~~~~--n~~sW~~~~~~l~iDqP~G~G 134 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAE-NGPCL--MNETTGDIYN--NTYSWNNEAYVIYVDQPAGVG 134 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhcc-CCCeE--EeCCCCceeE--CCcccccccCeEEEeCCCCcC
Confidence 46777765552 45789999999998876533321 10000 0000000000 00000125689999975 899
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHhC----------CcccceEEEecc
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV----------PERVLSLALLNV 160 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~----------p~~v~~lvl~~~ 160 (405)
.|.........+.++.++|+.++++.+ +..+++|+||||||.++..+|... +-.++++++.++
T Consensus 135 ~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 135 FSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred cccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecc
Confidence 886544323456688899999888843 447899999999999998887652 123688888887
Q ss_pred CC
Q 015550 161 TG 162 (405)
Q Consensus 161 ~~ 162 (405)
..
T Consensus 215 ~~ 216 (462)
T PTZ00472 215 LT 216 (462)
T ss_pred cc
Confidence 64
No 112
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.18 E-value=1.9e-09 Score=95.85 Aligned_cols=100 Identities=22% Similarity=0.265 Sum_probs=85.3
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
|+|+++|+.+|....|.++...|.. ...|+.++.||.|.-... .-+++++++.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-----------------------~~~v~~l~a~g~~~~~~~----~~~l~~~a~~ 53 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-----------------------LLPVYGLQAPGYGAGEQP----FASLDDMAAA 53 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-----------------------CceeeccccCcccccccc----cCCHHHHHHH
Confidence 4699999999999999999999987 799999999999863322 4589999998
Q ss_pred HHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhC---CcccceEEEeccCCC
Q 015550 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGG 163 (405)
Q Consensus 117 l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 163 (405)
..+.|..... .+++|+|||+||.+|...|.+- .+.|..|+++++...
T Consensus 54 yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 54 YVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 8888887754 5999999999999999999763 346999999998854
No 113
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.17 E-value=1.2e-09 Score=100.06 Aligned_cols=80 Identities=20% Similarity=0.273 Sum_probs=56.5
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEe
Q 015550 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 158 (405)
+||.|+.+|.||.|.|...... . ....++|..++|+-+ .+ .+|.++|.|++|..++.+|...|..+++++..
T Consensus 56 ~GY~vV~~D~RG~g~S~G~~~~--~-~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~ 132 (272)
T PF02129_consen 56 RGYAVVVQDVRGTGGSEGEFDP--M-SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQ 132 (272)
T ss_dssp TT-EEEEEE-TTSTTS-S-B-T--T-SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEE
T ss_pred CCCEEEEECCcccccCCCcccc--C-ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEec
Confidence 5999999999999999876542 1 344555555555544 44 48999999999999999999888899999998
Q ss_pred ccCCCCCC
Q 015550 159 NVTGGGFQ 166 (405)
Q Consensus 159 ~~~~~~~~ 166 (405)
.+....+.
T Consensus 133 ~~~~d~~~ 140 (272)
T PF02129_consen 133 SGWSDLYR 140 (272)
T ss_dssp SE-SBTCC
T ss_pred ccCCcccc
Confidence 87654443
No 114
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.16 E-value=1.3e-09 Score=89.03 Aligned_cols=136 Identities=14% Similarity=0.114 Sum_probs=97.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc
Q 015550 107 EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (405)
.-..+++++.+.+.+... .++++||+||+|+..++.++.+....|.|+.|++|+-.... ...
T Consensus 40 ~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~---~~~-------------- 101 (181)
T COG3545 40 APVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRP---EIR-------------- 101 (181)
T ss_pred CCCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcccc---ccc--------------
Confidence 346888888888888877 46799999999999999999988779999999998721100 000
Q ss_pred ChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEE
Q 015550 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (405)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlv 266 (405)
...... +.... ...+..|.++
T Consensus 102 ---------------------------------~~~~~t-----------------------f~~~p---~~~lpfps~v 122 (181)
T COG3545 102 ---------------------------------PKHLMT-----------------------FDPIP---REPLPFPSVV 122 (181)
T ss_pred ---------------------------------hhhccc-----------------------cCCCc---cccCCCceeE
Confidence 000000 00011 1234579999
Q ss_pred EeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Ccccccc---CHHHHHHHHHHHHHhh
Q 015550 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE---RTEEVNQALIDLIKAS 321 (405)
Q Consensus 267 i~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e---~p~~v~~~i~~fl~~~ 321 (405)
++.++|++++++.++.+++.+ .+.++.+.. ||+.-.+ ...+....+.+|+.+.
T Consensus 123 vaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 123 VASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred EEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 999999999999999999987 456776664 9977543 5667777888877654
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.16 E-value=1.6e-09 Score=86.45 Aligned_cols=183 Identities=17% Similarity=0.165 Sum_probs=125.4
Q ss_pred cCCCCeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC----CCCCCC
Q 015550 33 GRGPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS----VPVKKT 106 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~----~~~~~~ 106 (405)
|+.+-+||+-||.+.+.++ ....+..|+. +|+.|..|+++-+-... .|+...
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~----------------------~G~~vaRfefpYma~Rrtg~rkPp~~~ 68 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALAR----------------------RGWLVARFEFPYMAARRTGRRKPPPGS 68 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHh----------------------CceeEEEeecchhhhccccCCCCcCcc
Confidence 4444479999999988765 5667788887 59999999998653221 122222
Q ss_pred CCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc
Q 015550 107 EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (405)
..-..++...+.++...+...+.++-|+||||-++.++|..-...|++|++++-+.- | ..
T Consensus 69 ~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh-----p---------------pG 128 (213)
T COG3571 69 GTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH-----P---------------PG 128 (213)
T ss_pred ccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccC-----C---------------CC
Confidence 333456778888888888777999999999999999998876666999999984410 0 00
Q ss_pred ChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEE
Q 015550 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (405)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlv 266 (405)
.+ .....+.+..+++|+||
T Consensus 129 KP-------------------------------------------------------------e~~Rt~HL~gl~tPtli 147 (213)
T COG3571 129 KP-------------------------------------------------------------EQLRTEHLTGLKTPTLI 147 (213)
T ss_pred Cc-------------------------------------------------------------ccchhhhccCCCCCeEE
Confidence 00 00011345667899999
Q ss_pred EeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Ccccccc----------CHHHHHHHHHHHHHh
Q 015550 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE----------RTEEVNQALIDLIKA 320 (405)
Q Consensus 267 i~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e----------~p~~v~~~i~~fl~~ 320 (405)
.+|+.|.+-..+.....+ +.+..+++++.+ .|.+--. +-...++.|..|+..
T Consensus 148 ~qGtrD~fGtr~~Va~y~--ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 148 TQGTRDEFGTRDEVAGYA--LSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred eecccccccCHHHHHhhh--cCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999999998876653333 357789999987 7865321 223455666666654
No 116
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.11 E-value=2.2e-10 Score=100.58 Aligned_cols=169 Identities=18% Similarity=0.149 Sum_probs=90.6
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC-----CCCC--------
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG-----RSSV-------- 101 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G-----~S~~-------- 101 (405)
.++.|||+||++.+...++.+...|.+.+. +.++..+.+|-|--- -...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~------------------~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~ 64 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALK------------------KLDFEFVFVDGPHEVPPGPGIEPFSSEAESAF 64 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHH------------------HTT-EEEEE--SEE---GGG-SS---HHHHHH
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHh------------------hCcEEEEEecCCcccCCccccccccccccccc
Confidence 356799999999999998877766655211 016777777754221 1100
Q ss_pred ----CC------C---CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC--------cccceEEEecc
Q 015550 102 ----PV------K---KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP--------ERVLSLALLNV 160 (405)
Q Consensus 102 ----~~------~---~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p--------~~v~~lvl~~~ 160 (405)
+. . .....+++..+.+.+.++..|. -..|+|+|+||.+|..++.... ..++-+|++++
T Consensus 65 ~~~~~~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg 143 (212)
T PF03959_consen 65 GDPGPFYSWWDPDDDDHEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISG 143 (212)
T ss_dssp HHTT--EESS---S-SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES-
T ss_pred CCCCcceeeeecCCCcccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcc
Confidence 00 0 0122355566666666666652 3579999999999998886421 24788888887
Q ss_pred CCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh
Q 015550 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (405)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
..+... . +
T Consensus 144 ~~p~~~------~------------------------------------------------~------------------ 151 (212)
T PF03959_consen 144 FPPPDP------D------------------------------------------------Y------------------ 151 (212)
T ss_dssp ---EEE-------------------------------------------------------G------------------
T ss_pred cCCCch------h------------------------------------------------h------------------
Confidence 631000 0 0
Q ss_pred hHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC-eEEEEcCCCccccccC
Q 015550 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPGGHLVSHER 306 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~-~~l~~~~ggH~~~~e~ 306 (405)
.... .-..+++|+|.|+|++|.+++++..+.+++.+ .+ .+++..+|||.+....
T Consensus 152 ----------~~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~-~~~~~v~~h~gGH~vP~~~ 206 (212)
T PF03959_consen 152 ----------QELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMF-DPDARVIEHDGGHHVPRKK 206 (212)
T ss_dssp ----------TTTT---TT---EEEEEEETT-SSS-HHHHHHHHHHH-HHHEEEEEESSSSS----H
T ss_pred ----------hhhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhc-cCCcEEEEECCCCcCcCCh
Confidence 0000 12456799999999999999999999999987 45 8888889999887653
No 117
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.09 E-value=5.5e-09 Score=95.45 Aligned_cols=235 Identities=15% Similarity=0.135 Sum_probs=126.3
Q ss_pred CCCeEEEEecCCCCCCchh-hh-HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC--CCCCH
Q 015550 35 GPTKVILITGLAGTHDAWG-PQ-LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTT 110 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~-~~-~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~--~~~~~ 110 (405)
.+|.+|.++|.|.+....+ .+ +..|.+ +|+..+.+..|-||.-.+.... .-.++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~----------------------~gi~s~~le~Pyyg~RkP~~Q~~s~l~~V 148 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLK----------------------EGIASLILENPYYGQRKPKDQRRSSLRNV 148 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHH----------------------cCcceEEEecccccccChhHhhcccccch
Confidence 3566777888777443322 22 455555 4999999999999976543221 11122
Q ss_pred HHH----------HHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh--HHHHH
Q 015550 111 KIM----------AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL--QTLSI 178 (405)
Q Consensus 111 ~~~----------~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~ 178 (405)
.|+ +..+..+++..|..++.+.|.||||.+|...|...|..|..+-.+++......-....-. ..+..
T Consensus 149 sDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~ 228 (348)
T PF09752_consen 149 SDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDA 228 (348)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHH
Confidence 221 223344445558889999999999999999999999888777777765321110000000 00111
Q ss_pred HHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhh
Q 015550 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (405)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (405)
+...+........ ................ .......+..+..... .+....+.
T Consensus 229 L~~q~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~Ea~~~m~~~-------------------------md~~T~l~ 281 (348)
T PF09752_consen 229 LEKQFEDTVYEEE-ISDIPAQNKSLPLDSM-EERRRDREALRFMRGV-------------------------MDSFTHLT 281 (348)
T ss_pred HHHHhcccchhhh-hcccccCcccccchhh-ccccchHHHHHHHHHH-------------------------HHhhcccc
Confidence 1111000000000 0000000000000000 0000000000000000 01111122
Q ss_pred hcC-----CcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCcccc-ccCHHHHHHHHHHHHH
Q 015550 259 SAG-----FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVS-HERTEEVNQALIDLIK 319 (405)
Q Consensus 259 ~i~-----~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~-~e~p~~v~~~i~~fl~ 319 (405)
+.. -.+.++.+++|..+|......|.+.. |+++++.++|||... +-+.+.+.++|.+-++
T Consensus 282 nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W-PGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 282 NFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW-PGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred ccCCCCCCCcEEEEEecCceEechhhcchHHHhC-CCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 222 34889999999999998888999876 999999999999554 4577888888888664
No 118
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.08 E-value=9e-09 Score=91.90 Aligned_cols=207 Identities=20% Similarity=0.238 Sum_probs=118.0
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhc-CCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC----CCCC----CCC---
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----GRSS----VPV--- 103 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~-~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~----G~S~----~~~--- 103 (405)
..|.||+||++++...+..++..+. +... ....=++.++.-|. |.=. .|-
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~------------------~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV 72 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGV------------------AQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQV 72 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-------------------S-EEEEEEETTSEEEEES---TT-SS-EEEE
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCC------------------CceEEEEEECCCCeEEEeeecCCCCCCCEEEE
Confidence 3469999999999999999999997 5211 01222344444443 2211 110
Q ss_pred --CCCC-CCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccCCCCCCCCccc
Q 015550 104 --KKTE-YTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 104 --~~~~-~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~ 171 (405)
.... -+....++.+..++..| +++++.+|||||||+.+..++..+.. ++.++|.|+++..+.......
T Consensus 73 ~F~~n~~~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~ 152 (255)
T PF06028_consen 73 NFEDNRNANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDD 152 (255)
T ss_dssp EESSTT-CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-
T ss_pred EecCCCcCCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccccccc
Confidence 0011 35777888888888776 67899999999999999999887532 589999999875433211100
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
... . .+.. -+ .......++.+....
T Consensus 153 ~~~-----------------~-----------~~~~-~g-p~~~~~~y~~l~~~~------------------------- 177 (255)
T PF06028_consen 153 QNQ-----------------N-----------DLNK-NG-PKSMTPMYQDLLKNR------------------------- 177 (255)
T ss_dssp TTT-----------------T------------CST-T--BSS--HHHHHHHHTH-------------------------
T ss_pred chh-----------------h-----------hhcc-cC-CcccCHHHHHHHHHH-------------------------
Confidence 000 0 0000 00 011111222222110
Q ss_pred hhhhhhhhcCCcEEEEeec------CCccCCHHHHHHHHHHhCC---CeEEEEcCC---CccccccCHHHHHHHHHHHHH
Q 015550 252 KDIQTIRSAGFLVSVIHGR------HDVIAQICYARRLAEKLYP---VARMIDLPG---GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~------~D~~~~~~~~~~l~~~l~~---~~~l~~~~g---gH~~~~e~p~~v~~~i~~fl~ 319 (405)
...+ .-++.||-|.|. .|..+|...+..+..-+.+ ..+-.++.| .|.-.+|++ +|.+.|.+||-
T Consensus 178 --~~~~-p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 178 --RKNF-PKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp --GGGS-TTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred --HhhC-CCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 0011 124679999998 8999999888777665533 344455554 588888877 78899999983
No 119
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.08 E-value=2.7e-09 Score=89.21 Aligned_cols=95 Identities=26% Similarity=0.321 Sum_probs=73.8
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
.+||+-|=++-...=..+++.|.+ +|+.|+.+|-+-+=.+ .-+.++.+.|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~----------------------~G~~VvGvdsl~Yfw~-------~rtP~~~a~Dl 54 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAK----------------------QGVPVVGVDSLRYFWS-------ERTPEQTAADL 54 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHH----------------------CCCeEEEechHHHHhh-------hCCHHHHHHHH
Confidence 577888877655444566777877 5999999997644333 34677888888
Q ss_pred HHHHHHh----CCccEEEEEEChhHHHHHHHHHhCC----cccceEEEeccC
Q 015550 118 IALMDHL----GWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLALLNVT 161 (405)
Q Consensus 118 ~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~ 161 (405)
..++++. +.++++|+|+|+|+-+.-....+.| ++|..++|+++.
T Consensus 55 ~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 55 ARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred HHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 8888765 6679999999999988888877776 479999999986
No 120
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=1.3e-08 Score=104.78 Aligned_cols=220 Identities=17% Similarity=0.212 Sum_probs=140.4
Q ss_pred cccccCCEEEEEEEccC-------CCCeEEEEecCCCCCC-------chhhhHhhhcCCCCCCCCchhhhccccCCCCCC
Q 015550 18 AALNDNGIKIFYRTYGR-------GPTKVILITGLAGTHD-------AWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-------~~p~vvllHG~~~~~~-------~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~ 83 (405)
..+..+|...++...-+ .-|.||.+||.+++.. .|..+ ....
T Consensus 501 ~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~---------------------- 556 (755)
T KOG2100|consen 501 GKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSS---------------------- 556 (755)
T ss_pred EEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhcc----------------------
Confidence 34556888888876654 2267788889886332 23333 2333
Q ss_pred CCeEEEEecCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 84 AGIEVCAFDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
.|+.|+.+|.||-|..... ..-.....+++...+..+++.. +.+++.++|+|+||.+++..+...|+.+-++
T Consensus 557 ~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkc 636 (755)
T KOG2100|consen 557 RGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKC 636 (755)
T ss_pred CCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEE
Confidence 4999999999998766422 1112346666666666666654 4468999999999999999999998665555
Q ss_pred -EEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCc
Q 015550 156 -ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (405)
Q Consensus 156 -vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
|.++|..... .+...+.+++++........+++
T Consensus 637 gvavaPVtd~~---------------------------------~yds~~terymg~p~~~~~~y~e------------- 670 (755)
T KOG2100|consen 637 GVAVAPVTDWL---------------------------------YYDSTYTERYMGLPSENDKGYEE------------- 670 (755)
T ss_pred EEEecceeeee---------------------------------eecccccHhhcCCCccccchhhh-------------
Confidence 9999873110 01111111111111111111111
Q ss_pred ccchhhhHHhhhcccChhhhhhhhhcCCcE-EEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCC-CccccccCH-H
Q 015550 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLV-SVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERT-E 308 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-lvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~e~p-~ 308 (405)
......+..++.|. |++||+.|.-++.+.+..+.+.|. -..++.++|+ +|.+..-.. .
T Consensus 671 ----------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~ 734 (755)
T KOG2100|consen 671 ----------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVIS 734 (755)
T ss_pred ----------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchH
Confidence 01112233444455 999999999999999998888772 2378999998 999877543 6
Q ss_pred HHHHHHHHHHHhhcC
Q 015550 309 EVNQALIDLIKASEK 323 (405)
Q Consensus 309 ~v~~~i~~fl~~~~~ 323 (405)
.+...+..|+..+-.
T Consensus 735 ~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 735 HLYEKLDRFLRDCFG 749 (755)
T ss_pred HHHHHHHHHHHHHcC
Confidence 788889999986554
No 121
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.05 E-value=2.1e-09 Score=94.95 Aligned_cols=102 Identities=20% Similarity=0.196 Sum_probs=72.6
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
=|+|||+||+......|..++++++.+ ||-|+++|+...+...... ...+..++++
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvASh----------------------GyIVV~~d~~~~~~~~~~~--~~~~~~~vi~ 72 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASH----------------------GYIVVAPDLYSIGGPDDTD--EVASAAEVID 72 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhC----------------------ceEEEEecccccCCCCcch--hHHHHHHHHH
Confidence 378999999997777788999999984 9999999976644321111 0112223333
Q ss_pred HHHHHHH-Hh------CCccEEEEEEChhHHHHHHHHHhC-----CcccceEEEeccC
Q 015550 116 DVIALMD-HL------GWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVT 161 (405)
Q Consensus 116 dl~~~l~-~l------~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~ 161 (405)
.+.+-++ .+ +..++.|.|||-||-+|..++..+ +.+++++++++|.
T Consensus 73 Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 73 WLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred HHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 3322111 11 345899999999999999999887 5689999999987
No 122
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.99 E-value=1.1e-08 Score=89.79 Aligned_cols=93 Identities=22% Similarity=0.228 Sum_probs=59.7
Q ss_pred EEEEecCCCC---CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 39 VILITGLAGT---HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 39 vvllHG~~~~---~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
||++||.+-. .+....++..++.. .|+.|+.+|+|=.-. ..+.+..+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~v~~~~Yrl~p~---------~~~p~~~~ 50 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE---------------------RGFVVVSIDYRLAPE---------APFPAALE 50 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH---------------------HTSEEEEEE---TTT---------SSTTHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh---------------------ccEEEEEeecccccc---------cccccccc
Confidence 7899998754 34445566666531 399999999994321 23333444
Q ss_pred HHHHH----HHH-----hCCccEEEEEEChhHHHHHHHHHhCCc----ccceEEEeccC
Q 015550 116 DVIAL----MDH-----LGWKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (405)
Q Consensus 116 dl~~~----l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~ 161 (405)
|+.+. +++ .+.++++|+|+|.||.+|+.++.+..+ .++++++++|.
T Consensus 51 D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 51 DVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp HHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred ccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 44443 444 334689999999999999999986443 38999999985
No 123
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.98 E-value=1.3e-08 Score=86.33 Aligned_cols=62 Identities=26% Similarity=0.396 Sum_probs=50.6
Q ss_pred hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhc
Q 015550 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 258 ~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+.+++|.|-|.|+.|.++|......|++.+ +++.+...+|||++.-.. ...+.|.+||....
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~-~~a~vl~HpggH~VP~~~--~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESF-KDATVLEHPGGHIVPNKA--KYKEKIADFIQSFL 221 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhc-CCCeEEecCCCccCCCch--HHHHHHHHHHHHHH
Confidence 567899999999999999999999999987 888787778999997664 45556666665544
No 124
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.97 E-value=2.7e-08 Score=86.81 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=68.5
Q ss_pred CCeEEEEecCCCCCCchhhh--HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC------C-CCCC
Q 015550 36 PTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV------P-VKKT 106 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~------~-~~~~ 106 (405)
.|.||++||.+.+.+.+... +..|++. .||-|+.++......... . ....
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~---------------------~GfivvyP~~~~~~~~~~cw~w~~~~~~~g 74 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADR---------------------EGFIVVYPEQSRRANPQGCWNWFSDDQQRG 74 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhc---------------------CCeEEEcccccccCCCCCcccccccccccC
Confidence 47899999999988765432 2345543 489999988542111100 0 0000
Q ss_pred CCCHHHHHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 107 EYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.-+...++..+..+..+.+ ..+|++.|+|.||+++..++..+||.+.++..+++..
T Consensus 75 ~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 75 GGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred ccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 1122223333334444444 4589999999999999999999999999999888763
No 125
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.96 E-value=2.2e-08 Score=85.88 Aligned_cols=256 Identities=13% Similarity=0.103 Sum_probs=139.6
Q ss_pred CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC---CC----CCCC
Q 015550 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS---VP----VKKT 106 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~---~~----~~~~ 106 (405)
..++.+++++|.+|....|.++++.|...+. +.+.|+.+-..||-.-+ .. ....
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~-------------------~r~~~wtIsh~~H~~~P~sl~~~~s~~~~e 87 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLI-------------------DRLPVWTISHAGHALMPASLREDHSHTNEE 87 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcc-------------------cccceeEEeccccccCCccccccccccccc
Confidence 3567789999999999999999988876322 14668998888886543 11 1124
Q ss_pred CCCHHHHHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCC--cccceEEEeccCCCCCCCCccchhHHHHHHHHH
Q 015550 107 EYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF 182 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (405)
.+++++.++.-.++++..- -.+++++|||-|+++.+....... -.|.+.+++=|+.......|.-.. +......
T Consensus 88 ifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~--~t~~l~~ 165 (301)
T KOG3975|consen 88 IFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIR--LTKVLRY 165 (301)
T ss_pred ccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceE--eeeeeee
Confidence 6789999998888888763 358999999999999999887432 247888888766321111110000 0000000
Q ss_pred hhccChhhhhccCcccccCHhHHHhh----h-CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhh
Q 015550 183 FRAKTPEKRAAVDLDTHYSQEYLEEY----V-GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (405)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (405)
+.. ...........+.+.++..+ . .......+....-.......-......+.++-.. .......+.+
T Consensus 166 ~~h---v~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~----eV~~~d~e~~ 238 (301)
T KOG3975|consen 166 LPH---VVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEME----EVTTRDIEYC 238 (301)
T ss_pred ehh---hhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHH----HHHHhHHHHH
Confidence 000 00000000000111111111 0 0000000000000000000000000000000000 0111223445
Q ss_pred hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEc-CC-CccccccCHHHHHHHHHHHH
Q 015550 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL-PG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 258 ~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~-~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
.+-.+-+.+.+|..|.++|.++...+.+.+ |..++..- +. -|.+...+.+.+++.+.+.+
T Consensus 239 een~d~l~Fyygt~DgW~p~~~~d~~kdd~-~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 239 EENLDSLWFYYGTNDGWVPSHYYDYYKDDV-PEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HhcCcEEEEEccCCCCCcchHHHHHHhhhc-chhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 555688999999999999999999999987 54444332 44 89999999999998888765
No 126
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.96 E-value=1.2e-08 Score=90.10 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=71.1
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH-
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA- 114 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~- 114 (405)
+.+||||||++++...++.+...+.+.. ........++++++|+......-. ...+.+.+
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~--------------~~~~~~~~~d~ft~df~~~~s~~~-----g~~l~~q~~ 64 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKA--------------LLNDNSSHFDFFTVDFNEELSAFH-----GRTLQRQAE 64 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhh--------------hhccCccceeEEEeccCccccccc-----cccHHHHHH
Confidence 3469999999999888877776653210 001111368999999876532221 11222333
Q ss_pred ---HHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCC
Q 015550 115 ---KDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGG 163 (405)
Q Consensus 115 ---~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 163 (405)
+.+..+++.. +.+++++|||||||.+|-.++...+ +.|+.+|.++++..
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 3333444444 4578999999999999988876543 57999999998753
No 127
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.94 E-value=1.6e-08 Score=88.40 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=72.2
Q ss_pred EEecCC--CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 015550 41 LITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (405)
Q Consensus 41 llHG~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (405)
++|+.+ ++...|.++...|.. .+.|+++|.+|++.+... ..+.+.+++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-----------------------~~~v~~~~~~g~~~~~~~----~~~~~~~~~~~~ 54 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-----------------------RRDVSALPLPGFGPGEPL----PASADALVEAQA 54 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-----------------------CccEEEecCCCCCCCCCC----CCCHHHHHHHHH
Confidence 455544 566779999999887 799999999999876543 236777777665
Q ss_pred HHHH-HhCCccEEEEEEChhHHHHHHHHHh---CCcccceEEEeccCC
Q 015550 119 ALMD-HLGWKQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVTG 162 (405)
Q Consensus 119 ~~l~-~l~~~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 162 (405)
..+. ..+..+++++|||+||.++..++.. .++.+.+++++++..
T Consensus 55 ~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 55 EAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 5444 3445789999999999999998886 456799999998754
No 128
>PRK04940 hypothetical protein; Provisional
Probab=98.89 E-value=3.7e-07 Score=76.28 Aligned_cols=53 Identities=9% Similarity=-0.094 Sum_probs=37.1
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCe-EEEEcCCCccccccCHHHHHHHHHHHHHh
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVA-RMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~-~l~~~~ggH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..+++..+.|.+.+...+.+... ++ ++++.+||++-+ +.-++....|.+|++.
T Consensus 126 r~~vllq~gDEvLDyr~a~~~y~----~~y~~~v~~GGdH~f-~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEELH----PYYEIVWDEEQTHKF-KNISPHLQRIKAFKTL 179 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHHhc----cCceEEEECCCCCCC-CCHHHHHHHHHHHHhc
Confidence 36899999999998766554443 33 678888854332 5556788888888853
No 129
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.86 E-value=6.1e-08 Score=80.83 Aligned_cols=150 Identities=19% Similarity=0.141 Sum_probs=92.0
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHh-CCccEEEEEEChhHHHHHHHHHh-CCcccceEEE
Q 015550 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALM----DHL-GWKQAHVFGHSMGAMIACKLAAM-VPERVLSLAL 157 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l----~~l-~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl 157 (405)
.||+|..+++ +.+. ...++++...++...+ +.. ..+.+.+-|||.|+.+|..+..+ +..+|.++++
T Consensus 96 ~gY~vasvgY---~l~~-----q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l 167 (270)
T KOG4627|consen 96 RGYRVASVGY---NLCP-----QVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLIL 167 (270)
T ss_pred cCeEEEEecc---CcCc-----ccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHH
Confidence 3999999865 3442 1335555555444443 333 33567777899999999988766 3448999999
Q ss_pred eccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccc
Q 015550 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237 (405)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (405)
+++.. .. +-+..... . ..++-.. +-.
T Consensus 168 ~~GvY---------~l-------~EL~~te~----------------g-~dlgLt~-------~~a-------------- 193 (270)
T KOG4627|consen 168 LCGVY---------DL-------RELSNTES----------------G-NDLGLTE-------RNA-------------- 193 (270)
T ss_pred HhhHh---------hH-------HHHhCCcc----------------c-cccCccc-------chh--------------
Confidence 88651 00 00000000 0 0000000 000
Q ss_pred hhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccC
Q 015550 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHER 306 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~ 306 (405)
....-.+..+..+++|+|++.|++|.---.+..+.++..+ ..+++..+++ +|+-.+++
T Consensus 194 ----------e~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~-~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 194 ----------ESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL-RKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred ----------hhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh-hhcceeecCCcchhhHHHH
Confidence 0011123445678899999999999866678889999887 7799999999 99877664
No 130
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.83 E-value=1.9e-08 Score=95.67 Aligned_cols=102 Identities=21% Similarity=0.275 Sum_probs=59.5
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC-CCC-CC----------
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS-SVP-VK---------- 104 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S-~~~-~~---------- 104 (405)
|+|||-||++++...|..++..|+. +||-|+++|+|-.-.+ ... ..
T Consensus 101 PvvIFSHGlgg~R~~yS~~~~eLAS----------------------~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~ 158 (379)
T PF03403_consen 101 PVVIFSHGLGGSRTSYSAICGELAS----------------------HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYV 158 (379)
T ss_dssp EEEEEE--TT--TTTTHHHHHHHHH----------------------TT-EEEEE---SS-SSEEEE-SSHHHHHHT---
T ss_pred CEEEEeCCCCcchhhHHHHHHHHHh----------------------CCeEEEEeccCCCceeEEEeccCCCcccccccc
Confidence 7899999999999999999999998 5999999999953211 000 00
Q ss_pred ----C------CCC----C-------HHHHHHHHHHHHHHh--------------------------CCccEEEEEEChh
Q 015550 105 ----K------TEY----T-------TKIMAKDVIALMDHL--------------------------GWKQAHVFGHSMG 137 (405)
Q Consensus 105 ----~------~~~----~-------~~~~~~dl~~~l~~l--------------------------~~~~v~lvGhS~G 137 (405)
. ... . ++.-++++..+++.+ +..++.++|||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFG 238 (379)
T PF03403_consen 159 VEYLEEEWIPLRDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFG 238 (379)
T ss_dssp ------EEEE-----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHH
T ss_pred ccccccceeccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCch
Confidence 0 000 0 111223444444322 2347999999999
Q ss_pred HHHHHHHHHhCCcccceEEEeccC
Q 015550 138 AMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 138 g~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
|..++..+... .+++..|++++.
T Consensus 239 GATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 239 GATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp HHHHHHHHHH--TT--EEEEES--
T ss_pred HHHHHHHHhhc-cCcceEEEeCCc
Confidence 99999988776 689999999976
No 131
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.83 E-value=5e-07 Score=84.47 Aligned_cols=100 Identities=20% Similarity=0.126 Sum_probs=66.3
Q ss_pred CCeEEEEecCCCC---CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 36 PTKVILITGLAGT---HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 36 ~p~vvllHG~~~~---~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
.|+||++||.+-. .+.....+..+... .|+.|+.+|+|-.-+-. ....+++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~---------------------~g~~vv~vdYrlaPe~~-----~p~~~~d 132 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAA---------------------AGAVVVSVDYRLAPEHP-----FPAALED 132 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHH---------------------cCCEEEecCCCCCCCCC-----CCchHHH
Confidence 5789999998643 34443445444432 49999999998543322 2334444
Q ss_pred HHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhCCc----ccceEEEeccC
Q 015550 113 MAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (405)
Q Consensus 113 ~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~ 161 (405)
..+.+..+.++ ++ .+++.++|+|.||.+++.++..-.+ .....+++.|.
T Consensus 133 ~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 133 AYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred HHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 33333333333 33 4689999999999999999987544 46788888876
No 132
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.82 E-value=1.3e-08 Score=98.11 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=72.5
Q ss_pred CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 015550 47 GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW 126 (405)
Q Consensus 47 ~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~ 126 (405)
.....|..+++.|.+ .||.+ ..|++|+|.+.+.........+++.+.+.++.++.+.
T Consensus 105 ~~~~~~~~li~~L~~----------------------~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~ 161 (440)
T PLN02733 105 DEVYYFHDMIEQLIK----------------------WGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG 161 (440)
T ss_pred chHHHHHHHHHHHHH----------------------cCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC
Confidence 455789999999998 48755 8999999998765421122344555555555566677
Q ss_pred ccEEEEEEChhHHHHHHHHHhCCcc----cceEEEeccCCCCC
Q 015550 127 KQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGF 165 (405)
Q Consensus 127 ~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~ 165 (405)
++++|+||||||.++..++..+|+. |+++|+++++..+.
T Consensus 162 ~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 162 KKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 8999999999999999999988864 78999998875443
No 133
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.79 E-value=5.4e-08 Score=89.45 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=43.5
Q ss_pred cCCcEEEEeecCCccCCHHHHHHHHHHh---C-CCeEEEEcCC-Cccccc-cCHHHHHHHHHHHHH
Q 015550 260 AGFLVSVIHGRHDVIAQICYARRLAEKL---Y-PVARMIDLPG-GHLVSH-ERTEEVNQALIDLIK 319 (405)
Q Consensus 260 i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~-~~~~l~~~~g-gH~~~~-e~p~~v~~~i~~fl~ 319 (405)
.++|++|.+|..|.++|+...+.+.+++ . .+++++.+++ +|.... ........+|.+-++
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFA 283 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHC
Confidence 3699999999999999999999988777 3 3677888887 897643 233344444444443
No 134
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.77 E-value=2.3e-07 Score=78.29 Aligned_cols=173 Identities=18% Similarity=0.235 Sum_probs=109.2
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC--------------C
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV--------------P 102 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~--------------~ 102 (405)
.+||++||++.+...|..+.+.|.- .+...|++..|-.-.+.. .
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l----------------------~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~ 61 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPL----------------------PNIKWICPTAPSRPVTLNGGAFMNAWFDIMELS 61 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCC----------------------CCeeEEcCCCCCCcccccCCCcccceecceeeC
Confidence 3699999999999999888877654 255666554332111000 0
Q ss_pred -C-CCCCCCHHHHHHHHHHHHHHh---CC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 103 -V-KKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 103 -~-~~~~~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
. ....-.....++.+..+++.. |+ .++.+-|.||||++++..+..+|..+.+.+-..+..+.. ..
T Consensus 62 ~~~~~d~~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~------~~-- 133 (206)
T KOG2112|consen 62 SDAPEDEEGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRA------SI-- 133 (206)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccc------hh--
Confidence 0 001223445556666666654 33 478999999999999999999988888877766541000 00
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
.+. . |. .
T Consensus 134 ----------------------------~~~--------------~-----------------------~~--------~ 140 (206)
T KOG2112|consen 134 ----------------------------GLP--------------G-----------------------WL--------P 140 (206)
T ss_pred ----------------------------hcc--------------C-----------------------Cc--------c
Confidence 000 0 00 0
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHH
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQAL 314 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i 314 (405)
..+ ..|++..||+.|+++|....+...+.+ ...+++..++| +|...-+.-+++...|
T Consensus 141 ~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~ 201 (206)
T KOG2112|consen 141 GVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWI 201 (206)
T ss_pred ccC--cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHH
Confidence 000 479999999999999987766666554 23478888999 9987666554444443
No 135
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.76 E-value=8.9e-08 Score=84.35 Aligned_cols=122 Identities=16% Similarity=0.112 Sum_probs=72.8
Q ss_pred CCEEEEEEEccC-----CC---CeEEEEecCCCCCCchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 23 NGIKIFYRTYGR-----GP---TKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 23 ~g~~i~y~~~G~-----~~---p~vvllHG~~~~~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.|.+|-|+-+-+ ++ |.|||+||.+..+..-.. +...+.. ..-...+.++-|+++.+
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~ga---------------iawa~pedqcfVlAPQy 234 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGA---------------IAWAGPEDQCFVLAPQY 234 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccc---------------eeeecccCceEEEcccc
Confidence 467788877754 21 789999999887754332 2222211 00111112455666552
Q ss_pred -CCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 94 -RGMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 94 -~G~G~S~~~~~~~~~~~~~~~~dl~-~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+=+..++..+ ..-.....+-+. .+.++.++ .+|+++|.|+||+-++.++.++|+.+.+.+++++.+
T Consensus 235 ~~if~d~e~~t---~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 235 NPIFADSEEKT---LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred ccccccccccc---chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 1122222211 112233344444 23344444 589999999999999999999999999999999763
No 136
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.76 E-value=7.2e-08 Score=89.15 Aligned_cols=83 Identities=24% Similarity=0.225 Sum_probs=51.7
Q ss_pred CCCCCCCCeEEEEecCCCCCCCCCCCCC---CCCCHHHH---------------HHHHHHHHHHh------CCccEEEEE
Q 015550 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKK---TEYTTKIM---------------AKDVIALMDHL------GWKQAHVFG 133 (405)
Q Consensus 78 ~~~l~~~g~~Vi~~D~~G~G~S~~~~~~---~~~~~~~~---------------~~dl~~~l~~l------~~~~v~lvG 133 (405)
+..|+++||-|+++|.+|+|+....... ..++...+ +-|...++|.| +.++|.++|
T Consensus 153 g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~G 232 (390)
T PF12715_consen 153 GDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMG 232 (390)
T ss_dssp HHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEe
Confidence 3467789999999999999987543321 12222222 22333344544 235899999
Q ss_pred EChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 134 HSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 134 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+||||..++.+|+.. ++|+..|..+-.
T Consensus 233 fSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 233 FSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp EGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred ecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 999999999999986 589888877643
No 137
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.74 E-value=5.2e-08 Score=84.53 Aligned_cols=101 Identities=17% Similarity=0.160 Sum_probs=72.6
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCC-CCHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTE-YTTKIMAK 115 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~-~~~~~~~~ 115 (405)
|.|+|+||+.-....|..++.+++. .||-|+++++-..-. +....+ -+....++
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIAS----------------------HGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~ 101 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIAS----------------------HGFIVVAPQLYTLFP---PDGQDEIKSAASVIN 101 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhh----------------------cCeEEEechhhcccC---CCchHHHHHHHHHHH
Confidence 6799999999998899999999988 499999999875311 221111 12333334
Q ss_pred HHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHhCC--cccceEEEeccCC
Q 015550 116 DVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTG 162 (405)
Q Consensus 116 dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 162 (405)
++.+-+.++ +..++.++|||.||-.|..+|..+- -.+.+||.++|..
T Consensus 102 WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 102 WLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 444444333 3458999999999999999998763 2478899998873
No 138
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.71 E-value=7.7e-08 Score=84.39 Aligned_cols=50 Identities=18% Similarity=0.241 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHh-C--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 113 MAKDVIALMDHL-G--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 113 ~~~dl~~~l~~l-~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
+.+.+.+++... . .++|.|+|.|.||-+|+.+|..+| .|+++|.+++...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 445555666554 2 258999999999999999999998 8999999998753
No 139
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.70 E-value=2.1e-06 Score=79.68 Aligned_cols=104 Identities=14% Similarity=0.031 Sum_probs=74.2
Q ss_pred CCeEEEEecCCCC-----CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 36 PTKVILITGLAGT-----HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 36 ~p~vvllHG~~~~-----~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
.|.||++||.|-. ...|..+...++.. .+.-|+.+|+|=-=+.. ..-.+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~---------------------~~~vvvSVdYRLAPEh~-----~Pa~y 143 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAE---------------------LNCVVVSVDYRLAPEHP-----FPAAY 143 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHH---------------------cCeEEEecCcccCCCCC-----CCccc
Confidence 3689999998743 34578888888663 38999999998332222 23345
Q ss_pred HHHHHHHHHHHHH------hCCccEEEEEEChhHHHHHHHHHhC------CcccceEEEeccCCCCC
Q 015550 111 KIMAKDVIALMDH------LGWKQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVTGGGF 165 (405)
Q Consensus 111 ~~~~~dl~~~l~~------l~~~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~ 165 (405)
+|-.+.+.-+.++ .+.++++|+|-|.||.||..+|.+. +-++++.||+-|...+.
T Consensus 144 ~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 144 DDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred hHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 5555555555553 2557899999999999999988763 35799999999875443
No 140
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.69 E-value=1.4e-06 Score=79.00 Aligned_cols=103 Identities=22% Similarity=0.310 Sum_probs=74.9
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCCch------hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAW------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~------~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
+..|++.|-...-.. ....||++-|.++.-+.. +..+..+++. .+.+|+
T Consensus 117 Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~---------------------~~aNvl 175 (365)
T PF05677_consen 117 IQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE---------------------LGANVL 175 (365)
T ss_pred EeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH---------------------cCCcEE
Confidence 566777776544431 334799999988776651 1234444432 288999
Q ss_pred EecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----C--CccEEEEEEChhHHHHHHHHHhC
Q 015550 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----G--WKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-----~--~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
.+++||.|.|.++. +.+++++|-.+.++.| | .+++++.|||+||.++..++..+
T Consensus 176 ~fNYpGVg~S~G~~-----s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 176 VFNYPGVGSSTGPP-----SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred EECCCccccCCCCC-----CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 99999999997655 4688888888888776 2 25799999999999999876665
No 141
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.64 E-value=3.8e-08 Score=91.69 Aligned_cols=111 Identities=21% Similarity=0.351 Sum_probs=65.1
Q ss_pred CCCeEEEEecCCCCC--Cchh-hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 35 GPTKVILITGLAGTH--DAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 35 ~~p~vvllHG~~~~~--~~~~-~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
.+|++|++|||.++. ..|. .+.+.+..... .+++||++|+...-... -......+.
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~-------------------~d~NVI~VDWs~~a~~~--Y~~a~~n~~ 128 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDT-------------------GDYNVIVVDWSRGASNN--YPQAVANTR 128 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC---------------------S-EEEEEEE-HHHHSS---HHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhcc-------------------CCceEEEEcchhhcccc--ccchhhhHH
Confidence 457899999999888 3454 44454443100 28999999996332110 000011223
Q ss_pred HHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCc--ccceEEEeccCCCCCC
Q 015550 112 IMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQ 166 (405)
Q Consensus 112 ~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~ 166 (405)
.+.+.+..++..| ..++++|||||+||.+|-.++..... +|..+..++|+++.+.
T Consensus 129 ~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 129 LVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp HHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTT
T ss_pred HHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccccc
Confidence 3344444444333 35789999999999999999998877 8999999999976554
No 142
>PLN02606 palmitoyl-protein thioesterase
Probab=98.63 E-value=3.4e-06 Score=76.05 Aligned_cols=108 Identities=16% Similarity=0.188 Sum_probs=69.0
Q ss_pred CCeEEEEecCC--CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 36 PTKVILITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 36 ~p~vvllHG~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
+.|||+.||++ .+...+..+.+.+... .++.+..+. -|-+.. .. .-..+.+.
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~---------------------~~~pg~~v~-ig~~~~---~s-~~~~~~~Q 79 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINH---------------------SGYPGTCVE-IGNGVQ---DS-LFMPLRQQ 79 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhC---------------------CCCCeEEEE-ECCCcc---cc-cccCHHHH
Confidence 34699999999 4555677776666421 144333333 222221 10 11244444
Q ss_pred HHHHHHHHHH---hCCccEEEEEEChhHHHHHHHHHhCCc--ccceEEEeccCCCCCCCCcc
Q 015550 114 AKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 114 ~~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~ 170 (405)
++.+.+.+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.++++..|....|.
T Consensus 80 v~~vce~l~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~p~ 140 (306)
T PLN02606 80 ASIACEKIKQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIPK 140 (306)
T ss_pred HHHHHHHHhcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccCcc
Confidence 4444444333 22 359999999999999999999987 49999999998877766553
No 143
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=4.4e-07 Score=87.69 Aligned_cols=178 Identities=17% Similarity=0.194 Sum_probs=115.3
Q ss_pred CCeEEEEecCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHHhC---CccEEEEEEChhHHHHHHHHHhCCcccce
Q 015550 84 AGIEVCAFDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLS 154 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~ 154 (405)
.||-|+.+|.||....... ..-....++|.++-+.-+.++.| .++|.+-|||+||.++++...++|+.++.
T Consensus 675 lGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~Ifrv 754 (867)
T KOG2281|consen 675 LGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRV 754 (867)
T ss_pred cceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeE
Confidence 5999999999997544321 11124567888888888888875 46899999999999999999999998887
Q ss_pred EEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCc
Q 015550 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (405)
Q Consensus 155 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
.|.-+|... + ..|...|.+++++-....+.- |..
T Consensus 755 AIAGapVT~---------W------------------------~~YDTgYTERYMg~P~~nE~g---Y~a---------- 788 (867)
T KOG2281|consen 755 AIAGAPVTD---------W------------------------RLYDTGYTERYMGYPDNNEHG---YGA---------- 788 (867)
T ss_pred EeccCccee---------e------------------------eeecccchhhhcCCCccchhc---ccc----------
Confidence 776665421 0 011112222222222111000 000
Q ss_pred ccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccccc-CHHH
Q 015550 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHE-RTEE 309 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e-~p~~ 309 (405)
.. .....+.+..-.-..|++||--|.-+...+..+|...+ ++..++.++|+ -|.+--. .-.-
T Consensus 789 -----gS--------V~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~ 855 (867)
T KOG2281|consen 789 -----GS--------VAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIY 855 (867)
T ss_pred -----hh--------HHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchh
Confidence 00 00112233333345899999999999999988888777 45578999998 8987543 4455
Q ss_pred HHHHHHHHHHh
Q 015550 310 VNQALIDLIKA 320 (405)
Q Consensus 310 v~~~i~~fl~~ 320 (405)
+...|..|+++
T Consensus 856 yE~rll~FlQ~ 866 (867)
T KOG2281|consen 856 YEARLLHFLQE 866 (867)
T ss_pred HHHHHHHHHhh
Confidence 66778888764
No 144
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.59 E-value=3.5e-08 Score=90.55 Aligned_cols=92 Identities=26% Similarity=0.264 Sum_probs=65.4
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC--CCCCCCCCC----CCCCH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM--GRSSVPVKK----TEYTT 110 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~--G~S~~~~~~----~~~~~ 110 (405)
|.||+-||.++....+..+.+.|++ .||-|.++|++|- |........ ...-+
T Consensus 72 PlvvlshG~Gs~~~~f~~~A~~lAs----------------------~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~ 129 (365)
T COG4188 72 PLVVLSHGSGSYVTGFAWLAEHLAS----------------------YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEW 129 (365)
T ss_pred CeEEecCCCCCCccchhhhHHHHhh----------------------CceEEEeccCCCcccccCChhhcCCcccchhhh
Confidence 6788899999999999999999998 5999999999994 333322111 11122
Q ss_pred HHHHHHHHHHHHHh-------------CCccEEEEEEChhHHHHHHHHHhCCc
Q 015550 111 KIMAKDVIALMDHL-------------GWKQAHVFGHSMGAMIACKLAAMVPE 150 (405)
Q Consensus 111 ~~~~~dl~~~l~~l-------------~~~~v~lvGhS~Gg~ia~~~a~~~p~ 150 (405)
.+...|+..+++.| ...+|.++|||+||+.++.++....+
T Consensus 130 ~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 130 WERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 33444555544433 33589999999999999999876543
No 145
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.57 E-value=6.5e-06 Score=78.51 Aligned_cols=70 Identities=21% Similarity=0.225 Sum_probs=54.4
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEec
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 159 (405)
|+.||.+.+.- .|. ...++++.......+++.+ +..+.+|+|-|.||+.++.+|+.+|+.+..+|+-+
T Consensus 100 GHPvYFV~F~p-----~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaG 172 (581)
T PF11339_consen 100 GHPVYFVGFFP-----EPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAG 172 (581)
T ss_pred CCCeEEEEecC-----CCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecC
Confidence 99998887641 122 2457888887777777665 23489999999999999999999999998888876
Q ss_pred cC
Q 015550 160 VT 161 (405)
Q Consensus 160 ~~ 161 (405)
++
T Consensus 173 aP 174 (581)
T PF11339_consen 173 AP 174 (581)
T ss_pred CC
Confidence 65
No 146
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.56 E-value=1.4e-07 Score=82.30 Aligned_cols=88 Identities=24% Similarity=0.256 Sum_probs=53.3
Q ss_pred eEEEEecCCC-CCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE---EEEecCCCCCCCCCCCCC--CCCCHH
Q 015550 38 KVILITGLAG-THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGRSSVPVKK--TEYTTK 111 (405)
Q Consensus 38 ~vvllHG~~~-~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~---Vi~~D~~G~G~S~~~~~~--~~~~~~ 111 (405)
||||+||.++ ....|..+.+.|.. +||. |+++++-........... ..-+..
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~----------------------~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~ 60 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKA----------------------AGYCDSEVYALTYGSGNGSPSVQNAHMSCESAK 60 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHH----------------------TT--CCCEEEE--S-CCHHTHHHHHHB-HHHHH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHH----------------------cCCCcceeEeccCCCCCCCCcccccccchhhHH
Confidence 5999999999 55789999999988 5999 799998543332111100 001123
Q ss_pred HHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
++++-+.+++.+-|. +|.||||||||+++-.+..-.
T Consensus 61 ~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 61 QLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 455555555666688 999999999999998887643
No 147
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.55 E-value=3.5e-06 Score=72.67 Aligned_cols=94 Identities=14% Similarity=0.202 Sum_probs=61.6
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE-EEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE-VCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~-Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
++..|||..|||.+...+.++. +.+ ++. ++++|+|-. +.+.
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~--~~~-----------------------~~D~l~~yDYr~l------------~~d~- 51 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI--LPE-----------------------NYDVLICYDYRDL------------DFDF- 51 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc--CCC-----------------------CccEEEEecCccc------------cccc-
Confidence 3457999999999887665543 122 444 466787732 1110
Q ss_pred HHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 114 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
| .-+.+.++|||+|||-++|..+.... .++..|.+++++.+....-.++...+
T Consensus 52 --~------~~~y~~i~lvAWSmGVw~A~~~l~~~--~~~~aiAINGT~~Pid~~~GIpp~iF 104 (213)
T PF04301_consen 52 --D------LSGYREIYLVAWSMGVWAANRVLQGI--PFKRAIAINGTPYPIDDEYGIPPAIF 104 (213)
T ss_pred --c------cccCceEEEEEEeHHHHHHHHHhccC--CcceeEEEECCCCCcCCCCCCCHHHH
Confidence 1 12457999999999999998876554 47888889988766554444444433
No 148
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.55 E-value=3.4e-07 Score=82.22 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=57.3
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIA-LMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~-~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
||.|+.+++||++.|.+.+. .......++.+.+ .+..++. +.++++|||.||.-+..+|..||+ |+++||-++.
T Consensus 268 gYsvLGwNhPGFagSTG~P~--p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 268 GYSVLGWNHPGFAGSTGLPY--PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred CceeeccCCCCccccCCCCC--cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 99999999999999987664 3333333444333 4455654 579999999999999999999995 9999988764
No 149
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.49 E-value=9.4e-06 Score=79.06 Aligned_cols=135 Identities=17% Similarity=0.180 Sum_probs=79.5
Q ss_pred CCEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcC-CCCCCCCchhhhccccCCCCCCCCeEEEEecCC-C
Q 015550 23 NGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAG-TDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-G 95 (405)
Q Consensus 23 ~g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~-G 95 (405)
.+.+++|.-... ..|.||.+.|.+|++..+..+.+ ... +..+ +. ....... ..---+..+++-+|.| |
T Consensus 22 ~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e-~GP~~~~~-~~-~~~l~~n--~~sW~~~an~l~iD~PvG 96 (415)
T PF00450_consen 22 ENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGE-NGPFRINP-DG-PYTLEDN--PYSWNKFANLLFIDQPVG 96 (415)
T ss_dssp TTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCT-TSSEEEET-TS-TSEEEE---TT-GGGTSEEEEE--STT
T ss_pred CCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccc-cCceEEee-cc-ccccccc--ccccccccceEEEeecCc
Confidence 477888866653 45789999999999988754332 111 0000 00 0000000 0000025789999955 9
Q ss_pred CCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHh----C------CcccceEEE
Q 015550 96 MGRSSVPVKK-TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM----V------PERVLSLAL 157 (405)
Q Consensus 96 ~G~S~~~~~~-~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl 157 (405)
.|.|...... ...+.++.++|+..++..+ .-.+++|.|.|+||..+-.+|.. . +-.++++++
T Consensus 97 tGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~I 176 (415)
T PF00450_consen 97 TGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAI 176 (415)
T ss_dssp STT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEE
T ss_pred eEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccccee
Confidence 9999765542 2457888889988888765 33589999999999987777653 2 234889999
Q ss_pred eccCC
Q 015550 158 LNVTG 162 (405)
Q Consensus 158 ~~~~~ 162 (405)
.++..
T Consensus 177 Gng~~ 181 (415)
T PF00450_consen 177 GNGWI 181 (415)
T ss_dssp ESE-S
T ss_pred cCccc
Confidence 98764
No 150
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.40 E-value=2e-06 Score=82.76 Aligned_cols=149 Identities=18% Similarity=0.220 Sum_probs=98.9
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------HhCCccEEEEEEChhHHHHHHHHHhCCc-ccceE
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMD--------HLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSL 155 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~--------~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~l 155 (405)
-..|-+||++.--. ..++..-++.+..+.. ++...+++|+|.|||+.++++......| .|+++
T Consensus 208 vvev~tfdl~n~ig--------G~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~v 279 (784)
T KOG3253|consen 208 VVEVPTFDLNNPIG--------GANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAV 279 (784)
T ss_pred eeeeccccccCCCC--------CcchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEE
Confidence 56788888863211 1345555555555554 2344689999999999999998876542 48888
Q ss_pred EEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcc
Q 015550 156 ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (405)
Q Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
|.++-+..... . +
T Consensus 280 VCigypl~~vd------g--------------p----------------------------------------------- 292 (784)
T KOG3253|consen 280 VCIGYPLDTVD------G--------------P----------------------------------------------- 292 (784)
T ss_pred EEecccccCCC------c--------------c-----------------------------------------------
Confidence 88874310000 0 0
Q ss_pred cchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccC--------
Q 015550 236 GFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHER-------- 306 (405)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~-------- 306 (405)
+...+ +.+-.++.|||++.|.+|..+++...+.+.+++....+++++++ +|.+-...
T Consensus 293 -----------rgirD---E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegl 358 (784)
T KOG3253|consen 293 -----------RGIRD---EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGL 358 (784)
T ss_pred -----------cCCcc---hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccc
Confidence 00111 22345668999999999999999999999999988889999998 89775422
Q ss_pred -HHHHHHHHHHHHHhhc
Q 015550 307 -TEEVNQALIDLIKASE 322 (405)
Q Consensus 307 -p~~v~~~i~~fl~~~~ 322 (405)
..+|...+.++|.+.-
T Consensus 359 tqseVd~~i~~aI~efv 375 (784)
T KOG3253|consen 359 TQSEVDSAIAQAIKEFV 375 (784)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 3455555555554443
No 151
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.39 E-value=7.2e-06 Score=72.93 Aligned_cols=126 Identities=25% Similarity=0.282 Sum_probs=86.8
Q ss_pred CCcccccCCEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhH--hhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 16 PDAALNDNGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQL--KGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
....+..+|.+..|+.+-+ ++|.||.+||-.++...+.... ..|++. .||-|
T Consensus 36 ~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~---------------------~gFlV 94 (312)
T COG3509 36 SVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADR---------------------EGFLV 94 (312)
T ss_pred CccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcc---------------------cCcEE
Confidence 3445677888888777754 4578999999999887655544 455553 39999
Q ss_pred EEecC-------CCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHhCCcccceEEE
Q 015550 89 CAFDN-------RGMGRSSVPVK--KTEYTTKIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLAL 157 (405)
Q Consensus 89 i~~D~-------~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 157 (405)
..+|- .+.+.+..+.. ...-+...+.+-+..++...+++ +|++.|.|-||.++..++..+|+.+.++..
T Consensus 95 ~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~ 174 (312)
T COG3509 95 AYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAP 174 (312)
T ss_pred ECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceee
Confidence 99852 12233322221 11123334444555555666766 899999999999999999999999999999
Q ss_pred eccCC
Q 015550 158 LNVTG 162 (405)
Q Consensus 158 ~~~~~ 162 (405)
+++..
T Consensus 175 VAg~~ 179 (312)
T COG3509 175 VAGLL 179 (312)
T ss_pred eeccc
Confidence 98765
No 152
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.38 E-value=4.9e-05 Score=68.73 Aligned_cols=108 Identities=15% Similarity=0.161 Sum_probs=69.5
Q ss_pred CeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 37 TKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 37 p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.|+|+.||+|.+... ...+.+.+... .|..+.++.. |.+. ....-..+.+.+
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~---------------------~g~~~~~i~i---g~~~--~~s~~~~~~~Qv 79 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNL---------------------SGSPGFCLEI---GNGV--GDSWLMPLTQQA 79 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhC---------------------CCCceEEEEE---CCCc--cccceeCHHHHH
Confidence 369999999987653 34444444221 1566666554 3321 111223444555
Q ss_pred HHHHHHHHH---hCCccEEEEEEChhHHHHHHHHHhCCc--ccceEEEeccCCCCCCCCccc
Q 015550 115 KDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 115 ~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~ 171 (405)
+.+.+.+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.++++..|....|.-
T Consensus 80 e~vce~l~~~~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g~p~C 140 (314)
T PLN02633 80 EIACEKVKQMKELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSLPRC 140 (314)
T ss_pred HHHHHHHhhchhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeCCCCC
Confidence 544444433 22 359999999999999999999987 599999999988776665553
No 153
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.33 E-value=2.9e-06 Score=75.39 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=66.1
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.+..+||+||+..+.+.--..+..+...+. ....++.|.||+.|.-..-.. ...+...-.
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~-------------------~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~ 76 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLG-------------------FPGVVILFSWPSDGSLLGYFY-DRESARFSG 76 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhC-------------------CCceEEEEEcCCCCChhhhhh-hhhhHHHHH
Confidence 455799999999876543222222222100 123899999998886321111 111333334
Q ss_pred HHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHh----CC-----cccceEEEeccC
Q 015550 115 KDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAM----VP-----ERVLSLALLNVT 161 (405)
Q Consensus 115 ~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~----~p-----~~v~~lvl~~~~ 161 (405)
.++..++..+ +.++|++++||||+.+.+..... .+ .++..+||++|-
T Consensus 77 ~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 77 PALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred HHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 4555555544 56799999999999998887654 21 367889999864
No 154
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.27 E-value=3e-05 Score=67.46 Aligned_cols=208 Identities=17% Similarity=0.198 Sum_probs=111.5
Q ss_pred CCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH--------HHHHHH------hCCccEEEEEEChhHHHHHHHHHhC
Q 015550 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV--------IALMDH------LGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 83 ~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl--------~~~l~~------l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
+++...+.+..|-+|+...+.. ..+.-+.+.|+ .+.... .|..+..++|-||||.+|......+
T Consensus 139 k~~i~tmvle~pfYgqr~p~~q--~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~ 216 (371)
T KOG1551|consen 139 KREIATMVLEKPFYGQRVPEEQ--IIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLH 216 (371)
T ss_pred hhcchheeeecccccccCCHHH--HHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccC
Confidence 3689999999999998754432 11111122222 222222 2567899999999999999999988
Q ss_pred CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhh--hCCCchhHHHHHHHHhhh
Q 015550 149 PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEY--VGSSTRRAILYQEYVKGI 226 (405)
Q Consensus 149 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 226 (405)
+..|.-+-++++...........-....+...++.....-.... .....+.+.... ...+. +.+ ...+++.
T Consensus 217 q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~----~r~p~Q~~~~~~~~~srn~-~~E-~~~~Mr~- 289 (371)
T KOG1551|consen 217 QKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYT----SRNPAQSYHLLSKEQSRNS-RKE-SLIFMRG- 289 (371)
T ss_pred CCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhh----hhCchhhHHHHHHHhhhcc-hHH-HHHHHHH-
Confidence 87777776666543221111111111111111111110000000 000001111100 00000 000 0011110
Q ss_pred hhccccCcccchhhhHHhhhcccChhhhhhhhhcCCc-----EEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCcc
Q 015550 227 SATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL-----VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHL 301 (405)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-----vlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~ 301 (405)
.-++...+....+| +.++.+++|..+|..-...+.+.. |++++..++|||.
T Consensus 290 -----------------------vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~W-Pg~eVr~~egGHV 345 (371)
T KOG1551|consen 290 -----------------------VMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIW-PGCEVRYLEGGHV 345 (371)
T ss_pred -----------------------HHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhC-CCCEEEEeecCce
Confidence 01111122222233 678889999999987778888865 9999999999996
Q ss_pred cc-ccCHHHHHHHHHHHHHhhcC
Q 015550 302 VS-HERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 302 ~~-~e~p~~v~~~i~~fl~~~~~ 323 (405)
.. +-+-+++.++|.+-|++...
T Consensus 346 sayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 346 SAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred eeeehhchHHHHHHHHHHHhhhh
Confidence 54 45778999999999988763
No 155
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.24 E-value=0.00013 Score=67.73 Aligned_cols=39 Identities=31% Similarity=0.334 Sum_probs=33.2
Q ss_pred HhCCccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccC
Q 015550 123 HLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVT 161 (405)
Q Consensus 123 ~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 161 (405)
..+.++++|+||+.|+..+..+....+. .++++|++++.
T Consensus 189 ~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 189 QQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred hcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 3455679999999999999999988764 58999999976
No 156
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.20 E-value=7.2e-05 Score=64.96 Aligned_cols=107 Identities=21% Similarity=0.183 Sum_probs=71.9
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC----CCCCC----CC-----C
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----GRSSV----PV-----K 104 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~----G~S~~----~~-----~ 104 (405)
|.|||||.+|+..+...++..|...++..+ .-=++.+|--|- |.=+. |. .
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~-----------------e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe 109 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGT-----------------ESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFE 109 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccc-----------------cceEEEEcCCCcEEEeeeecccCCCCeEEEEEe
Confidence 689999999999999999998887432211 223455555441 11010 00 0
Q ss_pred CCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccC
Q 015550 105 KTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (405)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~ 161 (405)
...-+..++...+..++..| +++++.++||||||.-...|+..+.+ .++.+|.++++
T Consensus 110 ~n~~s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 110 DNTASGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred cCcCchhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 11234455566666666554 78899999999999999999887532 48999999976
No 157
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.20 E-value=1.4e-05 Score=70.32 Aligned_cols=107 Identities=16% Similarity=0.202 Sum_probs=57.8
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH---
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM--- 113 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~--- 113 (405)
..|||+||+.++...|..+...+.... ..+.--.+...+....... ...+++..
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~--------------------~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~r 61 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIP--------------------EDLPNARIVVLGYSNNEFK---TFDGIDVCGER 61 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhh--------------------hhcchhhhhhhcccccccc---cchhhHHHHHH
Confidence 469999999999998877766665410 0111111111111111101 12234444
Q ss_pred -HHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHh---CC----c-----ccceEEEeccCCCCCC
Q 015550 114 -AKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAM---VP----E-----RVLSLALLNVTGGGFQ 166 (405)
Q Consensus 114 -~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~---~p----~-----~v~~lvl~~~~~~~~~ 166 (405)
++++.+.++.... .++++|||||||.++-.+... .+ + +....+.++++..|..
T Consensus 62 L~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~ 129 (217)
T PF05057_consen 62 LAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSR 129 (217)
T ss_pred HHHHHHHhccccccccccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCc
Confidence 4444444444443 489999999999998655542 22 1 2334566777655544
No 158
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.20 E-value=8.9e-05 Score=71.56 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+.+++++.-.+++. +.++.+|.|+||||..|+.++.++|+++.+++.+++.
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 33456666666654 2356899999999999999999999999999999975
No 159
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.19 E-value=5.8e-06 Score=77.73 Aligned_cols=103 Identities=24% Similarity=0.301 Sum_probs=81.2
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE---EEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~---Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
+++++||++.+...|.++...+.. .|+. ++.++.++. ....+ .....+.+.
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~----------------------~g~~~~~~~~~~~~~~-~~~~~---~~~~~~ql~ 114 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAI----------------------LGWLTNGVYAFELSGG-DGTYS---LAVRGEQLF 114 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcc----------------------hHHHhccccccccccc-CCCcc---ccccHHHHH
Confidence 699999998888888888777665 3666 889988866 11111 234566677
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC--cccceEEEeccCCCCCC
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~ 166 (405)
.-+.+++...+.+++.++||||||.+...++...+ .+|+.++.++++..+..
T Consensus 115 ~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 115 AYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred HHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 77778888888899999999999999999999888 78999999998865443
No 160
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.10 E-value=1.9e-05 Score=70.43 Aligned_cols=40 Identities=25% Similarity=0.421 Sum_probs=35.7
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
|.|||-||++++...|..++-.|+. .||-|.++++|-+-.
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAS----------------------hG~VVaavEHRD~SA 158 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLAS----------------------HGFVVAAVEHRDRSA 158 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhh----------------------CceEEEEeecccCcc
Confidence 7899999999999999999999988 499999999986543
No 161
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.10 E-value=8.3e-05 Score=72.83 Aligned_cols=131 Identities=21% Similarity=0.241 Sum_probs=83.8
Q ss_pred ccccCCEEEEEEEccC---C-CCeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 19 ALNDNGIKIFYRTYGR---G-PTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~---~-~p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
+..-||++|+-..+-+ + .|+++..+-++-.... +..+...+.. ....+.+||.|+..|
T Consensus 24 V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~----------------~~~~aa~GYavV~qD 87 (563)
T COG2936 24 VPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQ----------------PAWFAAQGYAVVNQD 87 (563)
T ss_pred EEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccc----------------cceeecCceEEEEec
Confidence 3456999999777654 2 3566666733322221 1111000000 012233699999999
Q ss_pred CCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 93 NRGMGRSSVPVKKTEYT-TKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~-~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
.||.|.|++.... .++ -.+-.-|+++++....+ .+|..+|-|++|+..+.+|+..|-.++.++...+....+.
T Consensus 88 vRG~~~SeG~~~~-~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~ 163 (563)
T COG2936 88 VRGRGGSEGVFDP-ESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYR 163 (563)
T ss_pred ccccccCCcccce-eccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccccc
Confidence 9999999876542 222 11223466666666654 5899999999999999999998888999988887755443
No 162
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.99 E-value=0.00032 Score=59.75 Aligned_cols=99 Identities=16% Similarity=0.109 Sum_probs=71.4
Q ss_pred CeEEEEecCCCCCC---chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 37 TKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 37 p~vvllHG~~~~~~---~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
..||||-|++..-- .-.++...|.+ .+|..+-+-++.+ ..+....++++-
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde----------------------~~wslVq~q~~Ss-----y~G~Gt~slk~D 89 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDE----------------------NSWSLVQPQLRSS-----YNGYGTFSLKDD 89 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhh----------------------ccceeeeeecccc-----cccccccccccc
Confidence 46888988887542 34456666665 4899998887632 111124467788
Q ss_pred HHHHHHHHHHhCC----ccEEEEEEChhHHHHHHHHHh--CCcccceEEEeccCC
Q 015550 114 AKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTG 162 (405)
Q Consensus 114 ~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 162 (405)
++|+.++++|++. ..|+|+|||.|+.=.+.|... .|..|...|+.+|..
T Consensus 90 ~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 90 VEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred HHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 9999999999853 379999999999988777633 456688888888774
No 163
>PLN02209 serine carboxypeptidase
Probab=97.98 E-value=0.0016 Score=63.23 Aligned_cols=59 Identities=19% Similarity=0.285 Sum_probs=47.7
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhC-----------------------CC-eEEEEcCC-CccccccCHHHHHHHHH
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PV-ARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-----------------------~~-~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
+++||+..|+.|.+++.--.+.+.+.+. .+ .+++.+.+ ||++. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 5899999999999999887777777652 12 34556667 99996 69999999999
Q ss_pred HHHHh
Q 015550 316 DLIKA 320 (405)
Q Consensus 316 ~fl~~ 320 (405)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 164
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.93 E-value=2.8e-05 Score=59.62 Aligned_cols=60 Identities=28% Similarity=0.398 Sum_probs=54.0
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..|+|++.++.|.++|.+.++++++.+ ++++++..++ ||..+...-.-+.+.+.+||..-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l-~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL-PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC-CCceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 589999999999999999999999998 7799999999 99988665678899999999753
No 165
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.91 E-value=0.00042 Score=62.13 Aligned_cols=60 Identities=10% Similarity=-0.008 Sum_probs=49.0
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccccc-CHHHHHHHHHHHH
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHE-RTEEVNQALIDLI 318 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl 318 (405)
...+|-|+++++.|.+++.+..++.++.. +-+++...+++ .|..++. +|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 34589999999999999998888887655 23466777777 8988876 8999999999884
No 166
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.88 E-value=0.00022 Score=65.51 Aligned_cols=67 Identities=18% Similarity=0.304 Sum_probs=51.7
Q ss_pred hhhhhcC-CcEEEEeecCCccCCHHHHHHHHHHhCC-CeEEEEcCC-CccccccCHH---HHHHHHHHHHHhh
Q 015550 255 QTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTE---EVNQALIDLIKAS 321 (405)
Q Consensus 255 ~~l~~i~-~Pvlvi~G~~D~~~~~~~~~~l~~~l~~-~~~l~~~~g-gH~~~~e~p~---~v~~~i~~fl~~~ 321 (405)
..+..+. +|+|+++|..|.++|...+..+.+.... ..+...+++ +|........ +..+.+.+|+.+.
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 3444554 7999999999999999999999987744 456777776 8988865443 6788888888764
No 167
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.82 E-value=0.002 Score=62.57 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=47.5
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhC-----------------------CC-eEEEEcCC-CccccccCHHHHHHHHH
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PV-ARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-----------------------~~-~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
+++||+..|+.|.+++.--.+.+.+.+. .+ .+++.+.+ ||++. .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5899999999999999888887776652 11 34556666 99996 59999999999
Q ss_pred HHHHh
Q 015550 316 DLIKA 320 (405)
Q Consensus 316 ~fl~~ 320 (405)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
No 168
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.80 E-value=0.00018 Score=65.99 Aligned_cols=107 Identities=15% Similarity=0.164 Sum_probs=64.7
Q ss_pred CCCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC---CCCCCH
Q 015550 35 GPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK---KTEYTT 110 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~---~~~~~~ 110 (405)
++..+||+||+..+-+. -...++-.... +.....+.|.||..|.--.-.. ...|+-
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~--------------------g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr 174 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDS--------------------GNDGVPVVFSWPSRGSLLGYNYDRESTNYSR 174 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhc--------------------CCCcceEEEEcCCCCeeeecccchhhhhhhH
Confidence 45679999999876542 22222222221 0256788999998776422111 013333
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh--------CCcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM--------VPERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~--------~p~~v~~lvl~~~~ 161 (405)
..+.+-+..+.+....++|+|++||||.+++++...+ .+.+++-+||-+|-
T Consensus 175 ~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 175 PALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred HHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 3333333333344457789999999999999987654 23467788887743
No 169
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=0.00045 Score=60.67 Aligned_cols=107 Identities=18% Similarity=0.188 Sum_probs=73.7
Q ss_pred CeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC--CCCCCCCCCCCCHHH
Q 015550 37 TKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG--RSSVPVKKTEYTTKI 112 (405)
Q Consensus 37 p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G--~S~~~~~~~~~~~~~ 112 (405)
-|+|++||++++... ...+.+.+.+. .|..|+++|. |-| .|. -..+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~---------------------~g~~v~~lei-g~g~~~s~------l~pl~~ 75 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEEL---------------------PGSPVYCLEI-GDGIKDSS------LMPLWE 75 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhC---------------------CCCeeEEEEe-cCCcchhh------hccHHH
Confidence 359999999998876 66676666652 2889999996 333 221 223344
Q ss_pred HHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccCCCCCCCCccc
Q 015550 113 MAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 113 ~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~ 171 (405)
.++.+.+.+.... ..-++++|.|.||.++-.++...++ .|+.+|.++++..+....|.-
T Consensus 76 Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~p~c 137 (296)
T KOG2541|consen 76 QVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGIPRC 137 (296)
T ss_pred HHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCccCCCCC
Confidence 4444443333221 1458999999999999999988664 599999999887776665553
No 170
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.79 E-value=0.00035 Score=61.92 Aligned_cols=101 Identities=17% Similarity=0.157 Sum_probs=72.3
Q ss_pred CCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 36 PTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.|.||++-...|+... .+...+.|.. ...|+..|+----.-+ -....+++++++
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp-----------------------~~~vyitDW~dAr~Vp--~~~G~FdldDYI 157 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLP-----------------------YHDVYITDWVDARMVP--LEAGHFDLDDYI 157 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhcc-----------------------ccceeEeeccccceee--cccCCccHHHHH
Confidence 4567777777766543 4556666766 6789999986433332 222478999999
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHH-----HHHHHHHhCCcccceEEEeccCC
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAM-----IACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~-----ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+-+++.+..+|.+ +++++-|.-+. ++++.+...|..-.++++++++.
T Consensus 158 dyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 158 DYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred HHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 9999999999954 89999887654 44444445677788999998764
No 171
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.78 E-value=0.00013 Score=61.57 Aligned_cols=107 Identities=22% Similarity=0.290 Sum_probs=68.7
Q ss_pred CCeEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC--CC---CCCCCCCC----
Q 015550 36 PTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR--GM---GRSSVPVK---- 104 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~--G~---G~S~~~~~---- 104 (405)
-|+|.++.|+..+.+.+-. .....+.+ .|+.|+++|-. |. |.++.-+.
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~---------------------hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASK---------------------HGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhh---------------------cCeEEECCCCCCCccccCCCcccccccCCc
Confidence 3678899999999886532 12222221 48999999853 33 22211000
Q ss_pred -----------CCCCCHHH-HHHHHHHHHHH----hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 105 -----------KTEYTTKI-MAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 105 -----------~~~~~~~~-~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
...|.+.+ +++.+.++++. ++..++.+.||||||.-|+..+.+.|.+.+++-..+|...
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 01122222 33555555552 2345799999999999999999999999999998888753
No 172
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.74 E-value=0.00013 Score=72.70 Aligned_cols=129 Identities=16% Similarity=0.143 Sum_probs=71.4
Q ss_pred cCCEEEEEEEccC----------CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 22 DNGIKIFYRTYGR----------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 22 ~~g~~i~y~~~G~----------~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
.+-+.++.+..|. +.-||+||+|..|+-..-+.++..-..-+.... .......+....++.+++
T Consensus 65 a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~------~e~t~~~d~~~~~DFFaV 138 (973)
T KOG3724|consen 65 ADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGP------FEKTEDRDNPFSFDFFAV 138 (973)
T ss_pred CCceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCc------hhhhhcccCccccceEEE
Confidence 3556666555442 223699999999987665555543331110000 001222334457788888
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----C--------CccEEEEEEChhHHHHHHHHHh---CCcccceE
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----G--------WKQAHVFGHSMGAMIACKLAAM---VPERVLSL 155 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-----~--------~~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~l 155 (405)
|+-+-= ......++.+.++-+.+.++.+ + .+.|+++||||||++|...+.. .++.|+-+
T Consensus 139 DFnEe~-----tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntI 213 (973)
T KOG3724|consen 139 DFNEEF-----TAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTI 213 (973)
T ss_pred cccchh-----hhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhh
Confidence 875410 0011224555555444444322 2 2349999999999999877653 24556667
Q ss_pred EEeccC
Q 015550 156 ALLNVT 161 (405)
Q Consensus 156 vl~~~~ 161 (405)
+..+++
T Consensus 214 ITlssP 219 (973)
T KOG3724|consen 214 ITLSSP 219 (973)
T ss_pred hhhcCc
Confidence 777665
No 173
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.67 E-value=0.0008 Score=62.53 Aligned_cols=85 Identities=25% Similarity=0.248 Sum_probs=61.3
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
..-||+.|=|+-.+.=+.+..+|.+ +|+.|+.+|-.-+=.| ..+.++.++|
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~----------------------~gvpVvGvdsLRYfW~-------~rtPe~~a~D 311 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQK----------------------QGVPVVGVDSLRYFWS-------ERTPEQIAAD 311 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHH----------------------CCCceeeeehhhhhhc-------cCCHHHHHHH
Confidence 3456666666544444566677776 6999999996533333 4477889999
Q ss_pred HHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc
Q 015550 117 VIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE 150 (405)
Q Consensus 117 l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~ 150 (405)
+..++++. +.+++.|+|+|+|+-+.-....+.|.
T Consensus 312 l~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 312 LSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 99988876 55789999999999987776666553
No 174
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.64 E-value=0.0088 Score=55.95 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=47.3
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhC-----------------------CC-eEEEEcCC-CccccccCHHHHHHHHH
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PV-ARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-----------------------~~-~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
+++|||..|+.|.+++.--.+.+.+.+. .+ .+++.+.+ ||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 5899999999999999887777777662 11 34555667 99996 59999999999
Q ss_pred HHHHh
Q 015550 316 DLIKA 320 (405)
Q Consensus 316 ~fl~~ 320 (405)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 175
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.64 E-value=0.0029 Score=59.43 Aligned_cols=110 Identities=15% Similarity=0.075 Sum_probs=70.9
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.+|.||++||.|-.-.....++..|...+..+ . ...++.+|+.-...-. .....+.-+.+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l---------------~--~~SILvLDYsLt~~~~-~~~~yPtQL~qlv 182 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL---------------P--EVSILVLDYSLTSSDE-HGHKYPTQLRQLV 182 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc---------------C--CCeEEEEecccccccc-CCCcCchHHHHHH
Confidence 45889999999877766555554443311111 1 3488888876443000 0111233455666
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC--Cc---ccceEEEeccCC
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PE---RVLSLALLNVTG 162 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p~---~v~~lvl~~~~~ 162 (405)
+-...+++..|.++++|+|-|.||.+++.+.+.. ++ .-+++||++|..
T Consensus 183 ~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 183 ATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred HHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 6666777677889999999999999999886532 11 257999999874
No 176
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.63 E-value=8.4e-05 Score=67.03 Aligned_cols=49 Identities=20% Similarity=0.263 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHh-CCc--cEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 113 MAKDVIALMDHL-GWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 113 ~~~dl~~~l~~l-~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+.+++...++.- ... +..++|+||||..|+.++.++|+.+.+++.+++.
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 445666666643 322 2799999999999999999999999999999975
No 177
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.58 E-value=0.01 Score=57.50 Aligned_cols=134 Identities=15% Similarity=0.055 Sum_probs=79.1
Q ss_pred cccccC---CEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCC------
Q 015550 18 AALNDN---GIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG------ 83 (405)
Q Consensus 18 ~~~~~~---g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~------ 83 (405)
.+++++ +..++|.-... .+|.||.+.|.+|++..- -++.++.. +.- . ..+.-|..
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GP----f~v-----~-~~G~tL~~N~ySWn 115 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGP----FRV-----K-YNGKTLYLNPYSWN 115 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCC----eEE-----c-CCCCcceeCCcccc
Confidence 334444 78888865442 457899999999988654 22222221 000 0 00001111
Q ss_pred CCeEEEEecCC-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHh----C--
Q 015550 84 AGIEVCAFDNR-GMGRSSVPVKK-TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM----V-- 148 (405)
Q Consensus 84 ~g~~Vi~~D~~-G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~----~-- 148 (405)
+--+++-+|.| |.|.|-..+.. ...+-+..++|...++... .-++++|.|-|++|...-.+|.. .
T Consensus 116 k~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~ 195 (454)
T KOG1282|consen 116 KEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKK 195 (454)
T ss_pred ccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccc
Confidence 13468899988 88888543321 1124455667766666533 33689999999999877777653 2
Q ss_pred ----CcccceEEEeccCC
Q 015550 149 ----PERVLSLALLNVTG 162 (405)
Q Consensus 149 ----p~~v~~lvl~~~~~ 162 (405)
+-.++|+++-++..
T Consensus 196 ~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 196 CCKPNINLKGYAIGNGLT 213 (454)
T ss_pred ccCCcccceEEEecCccc
Confidence 12478888877764
No 178
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.58 E-value=0.00052 Score=67.29 Aligned_cols=119 Identities=18% Similarity=0.144 Sum_probs=75.0
Q ss_pred CEEEEEEEccC----CCCeEEEEecCCCCCCch---hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 24 GIKIFYRTYGR----GPTKVILITGLAGTHDAW---GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 24 g~~i~y~~~G~----~~p~vvllHG~~~~~~~~---~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
-.+.+|..... +.| |+|.-|.-+..+.. ..++..|++. -|--|+++++|-+
T Consensus 13 tf~qRY~~n~~~~~~~gp-ifl~~ggE~~~~~~~~~~~~~~~lA~~---------------------~~a~~v~lEHRyY 70 (434)
T PF05577_consen 13 TFSQRYWVNDQYYKPGGP-IFLYIGGEGPIEPFWINNGFMWELAKE---------------------FGALVVALEHRYY 70 (434)
T ss_dssp EEEEEEEEE-TT--TTSE-EEEEE--SS-HHHHHHH-HHHHHHHHH---------------------HTEEEEEE--TTS
T ss_pred eEEEEEEEEhhhcCCCCC-EEEEECCCCccchhhhcCChHHHHHHH---------------------cCCcEEEeehhhh
Confidence 34556655542 444 66666665554322 2244555553 2789999999999
Q ss_pred CCCCCCCC-----CCCCCHHHHHHHHHHHHHHhC-------CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCC
Q 015550 97 GRSSVPVK-----KTEYTTKIMAKDVIALMDHLG-------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (405)
Q Consensus 97 G~S~~~~~-----~~~~~~~~~~~dl~~~l~~l~-------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (405)
|.|.+... -...+.++..+|+..+++++. -.|++++|-|+||++|..+-.+||+.|.+.+.-+++...
T Consensus 71 G~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 71 GKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred cCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 99964321 134688899999999988763 137999999999999999999999999999988877543
No 179
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.57 E-value=0.0045 Score=58.33 Aligned_cols=63 Identities=14% Similarity=0.027 Sum_probs=44.3
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEc-----------CC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDL-----------PG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~-----------~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
++-....|+..|..+|.+.-+.+.+.+ .=+++++.+ .. .|.+-+..-.-+...+-..+++...
T Consensus 293 ~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~ 370 (403)
T PF11144_consen 293 KIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQG 370 (403)
T ss_pred ceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhc
Confidence 345678899999999999888887765 446788776 24 5665555555666776666666443
No 180
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.55 E-value=0.002 Score=60.68 Aligned_cols=70 Identities=14% Similarity=0.042 Sum_probs=58.4
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCCC
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKKI 325 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~~ 325 (405)
.+....++++|-++|.|..|....+.....+.+.+.....+..+|+ +|.... ..+.+.|..|+.......
T Consensus 254 P~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 254 PYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred HHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHHcCC
Confidence 3344466789999999999999999999999999966788999998 998866 678888999998875543
No 181
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.54 E-value=0.00014 Score=65.24 Aligned_cols=110 Identities=15% Similarity=0.087 Sum_probs=57.8
Q ss_pred CeEEEEecCCCCC---Cchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC-CCCCCCCCCC
Q 015550 37 TKVILITGLAGTH---DAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS-SVPVKKTEYT 109 (405)
Q Consensus 37 p~vvllHG~~~~~---~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S-~~~~~~~~~~ 109 (405)
.|||+.||+|.+. ..+..+ ++.... |..|.+++.- -+.+ +.... .-.+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-----------------------G~yV~si~ig-~~~~~D~~~s-~f~~ 60 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHP-----------------------GTYVHSIEIG-NDPSEDVENS-FFGN 60 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHST-----------------------T--EEE--SS-SSHHHHHHHH-HHSH
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCC-----------------------CceEEEEEEC-CCcchhhhhh-HHHH
Confidence 3699999999764 244444 333333 8888888873 2211 10000 0123
Q ss_pred HHHHHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccCCCCCCCCccc
Q 015550 110 TKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~ 171 (405)
+.+.++.+.+.+.... ..-++++|+|.||.++-.++.+.|+ .|+.+|.++++..|....|..
T Consensus 61 v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~p~c 125 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGLPFC 125 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-TCH
T ss_pred HHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccCCcc
Confidence 3444444444444321 1469999999999999999999875 699999999988777666653
No 182
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.52 E-value=0.00092 Score=66.71 Aligned_cols=78 Identities=17% Similarity=0.091 Sum_probs=49.4
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCCCCHHHHH---HHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHh--CCcccc
Q 015550 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMA---KDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAM--VPERVL 153 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~---~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~ 153 (405)
++-|+.+++| |+..+........+-+.|.. +.+.+-++.+| .++|+|+|+|.||..+..++.. .+..++
T Consensus 125 ~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~ 204 (493)
T cd00312 125 NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFH 204 (493)
T ss_pred CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHH
Confidence 3999999999 33333221111122233333 34444455554 3589999999999999888775 234688
Q ss_pred eEEEeccCC
Q 015550 154 SLALLNVTG 162 (405)
Q Consensus 154 ~lvl~~~~~ 162 (405)
++|++++..
T Consensus 205 ~~i~~sg~~ 213 (493)
T cd00312 205 RAISQSGSA 213 (493)
T ss_pred HHhhhcCCc
Confidence 899888654
No 183
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.51 E-value=0.00069 Score=65.14 Aligned_cols=119 Identities=18% Similarity=0.234 Sum_probs=70.1
Q ss_pred cccCCEEEEEEEccCCCCeEEEEe-cCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILIT-GLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllH-G~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
...+|+.|.....|.-. .|-.+- .+......|..+++.|.+. ++..+......-+|+|=
T Consensus 35 ~~~~gv~i~~~~~g~~~-~i~~ld~~~~~~~~~~~~li~~L~~~----------------GY~~~~~l~~~pYDWR~--- 94 (389)
T PF02450_consen 35 SNDPGVEIRVPGFGGTS-GIEYLDPSFITGYWYFAKLIENLEKL----------------GYDRGKDLFAAPYDWRL--- 94 (389)
T ss_pred ecCCCceeecCCCCcee-eeeecccccccccchHHHHHHHHHhc----------------CcccCCEEEEEeechhh---
Confidence 34566777665555211 122221 1212222789999999762 01111122334478872
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCc------ccceEEEeccCCCCC
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPE------RVLSLALLNVTGGGF 165 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~~ 165 (405)
+ ....+++...+.+.++.. .-++|+|+||||||.++..+....+. .|+++|.++++..|.
T Consensus 95 ~-------~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 95 S-------PAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred c-------hhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 1 112334555555555543 24799999999999999999888753 599999999875543
No 184
>COG3150 Predicted esterase [General function prediction only]
Probab=97.40 E-value=0.00035 Score=56.82 Aligned_cols=88 Identities=16% Similarity=0.223 Sum_probs=62.9
Q ss_pred EEEEecCCCCCCchhhhH--hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 39 VILITGLAGTHDAWGPQL--KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 39 vvllHG~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
||++|||.++..+...+. ..+.. |.|-.+.+... ...+....++.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~------------------------------~~~~i~y~~p~---l~h~p~~a~~e 48 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE------------------------------DVRDIEYSTPH---LPHDPQQALKE 48 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc------------------------------cccceeeecCC---CCCCHHHHHHH
Confidence 799999999888876543 22332 11222222211 14478889999
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+..++...+.+...++|-|+||+.|..++.++. + ..|++||..
T Consensus 49 le~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--i-rav~~NPav 91 (191)
T COG3150 49 LEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--I-RAVVFNPAV 91 (191)
T ss_pred HHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--C-hhhhcCCCc
Confidence 999999998788999999999999999999874 3 445677764
No 185
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.11 E-value=0.0082 Score=48.58 Aligned_cols=92 Identities=14% Similarity=0.229 Sum_probs=59.6
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE-EEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE-VCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~-Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
..||+.-|++..+.....++ +.+ ++. ++++|+....- ++++..
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpe-----------------------N~dl~lcYDY~dl~l--------dfDfsA--- 55 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPE-----------------------NHDLLLCYDYQDLNL--------DFDFSA--- 55 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCC-----------------------CCcEEEEeehhhcCc--------ccchhh---
Confidence 36888889988877655543 222 554 56788763321 222221
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
.+.+.+|++|||-.+|-.+..-. +.++.+.+++++.+-.....+....+
T Consensus 56 ----------y~hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTgLpcDds~GIp~AIF 104 (214)
T COG2830 56 ----------YRHIRLVAWSMGVWVAERVLQGI--RLKSATAINGTGLPCDDSFGIPPAIF 104 (214)
T ss_pred ----------hhhhhhhhhhHHHHHHHHHHhhc--cccceeeecCCCCCccccCCCCHHHH
Confidence 14567999999999999888765 58889999988765554444444333
No 186
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.10 E-value=0.0052 Score=60.13 Aligned_cols=117 Identities=18% Similarity=0.180 Sum_probs=75.6
Q ss_pred cccCCEEEEEEEccCC-----CCeEEEEecCCCCC----CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 20 LNDNGIKIFYRTYGRG-----PTKVILITGLAGTH----DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~-----~p~vvllHG~~~~~----~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.+-||.+|.|...+++ .|+ ++||+|+-. -.|.+....+.+ +|...+.
T Consensus 400 tSkDGT~IPYFiv~K~~~~d~~pT--ll~aYGGF~vsltP~fs~~~~~WLe----------------------rGg~~v~ 455 (648)
T COG1505 400 TSKDGTRIPYFIVRKGAKKDENPT--LLYAYGGFNISLTPRFSGSRKLWLE----------------------RGGVFVL 455 (648)
T ss_pred EcCCCccccEEEEecCCcCCCCce--EEEeccccccccCCccchhhHHHHh----------------------cCCeEEE
Confidence 5679999999777532 454 455555432 235555554444 3888888
Q ss_pred ecCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHh---CC---ccEEEEEEChhHHHHHHHHHhCCcccceEEEecc
Q 015550 91 FDNRGMGRSSVPVKK--TEYTTKIMAKDVIALMDHL---GW---KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~--~~~~~~~~~~dl~~~l~~l---~~---~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (405)
-+.||=|.=...-.. ...+-+...+|..++.+.| |+ +++.+.|-|-||.+.-....++|+.+.++|+--|
T Consensus 456 ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 456 ANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred EecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 899997765321110 1112334556666666655 33 4789999999999988888899998877776544
No 187
>COG0627 Predicted esterase [General function prediction only]
Probab=97.03 E-value=0.0029 Score=58.60 Aligned_cols=55 Identities=27% Similarity=0.285 Sum_probs=41.1
Q ss_pred CCHHHHH-HHHHHHHH-HhCC----ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 108 YTTKIMA-KDVIALMD-HLGW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 108 ~~~~~~~-~dl~~~l~-~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+.++++. +++-+.++ +... ++..++||||||.-|+.+|+++|+++..+..+++..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 4454443 45554444 3331 268999999999999999999999999999888764
No 188
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.99 E-value=0.0083 Score=56.10 Aligned_cols=116 Identities=20% Similarity=0.172 Sum_probs=81.2
Q ss_pred EEEEEEc----cCCCCeEEEEecCCCCCCchhh---hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 26 KIFYRTY----GRGPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 26 ~i~y~~~----G~~~p~vvllHG~~~~~~~~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
.++|... .++..||+|--|.-++.+.+.. ++-.++.. .+--++-.++|-+|+
T Consensus 66 ~qRylin~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~---------------------~~AllVFaEHRyYGe 124 (492)
T KOG2183|consen 66 DQRYLINDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPE---------------------LKALLVFAEHRYYGE 124 (492)
T ss_pred eeEEEEecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHh---------------------hCceEEEeehhcccc
Confidence 4455443 2343459999999888766543 33333332 266789999999999
Q ss_pred CCCCCCC--------CCCCHHHHHHHHHHHHHHhCC------ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 99 SSVPVKK--------TEYTTKIMAKDVIALMDHLGW------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 99 S~~~~~~--------~~~~~~~~~~dl~~~l~~l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
|-+--.. ...+.++...|..+++.++.- .+|+.+|.|+|||+|..+=.+||+.|.|...-+.+.
T Consensus 125 S~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 125 SLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred CCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 9542221 234567777788888887742 379999999999999999999999988876655543
No 189
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.94 E-value=0.0028 Score=52.43 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc----ccceEEEeccCC
Q 015550 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVTG 162 (405)
Q Consensus 111 ~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~ 162 (405)
..+.+.+...++.. ...+++++|||+||.+|..++..... ++..++.++++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 33445555555443 56789999999999999999888654 567788888764
No 190
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.76 E-value=0.019 Score=51.80 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=31.5
Q ss_pred cEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 128 QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 128 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
.-+|.|.|+||.+++..+..+|+++-.++..++.
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 4689999999999999999999999999988876
No 191
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.64 E-value=0.011 Score=59.56 Aligned_cols=79 Identities=16% Similarity=0.059 Sum_probs=46.9
Q ss_pred CCeEEEEecCC----CCCCCCCCCCC-CCCCHHHHHH---HHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhC--Ccc
Q 015550 84 AGIEVCAFDNR----GMGRSSVPVKK-TEYTTKIMAK---DVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV--PER 151 (405)
Q Consensus 84 ~g~~Vi~~D~~----G~G~S~~~~~~-~~~~~~~~~~---dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~ 151 (405)
+++-|+.+++| |+-.+...... ..+-+.|+.. .+.+-|.++| .++|.|+|||.||..+..+...- ...
T Consensus 155 ~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~L 234 (535)
T PF00135_consen 155 KDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGL 234 (535)
T ss_dssp HTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTS
T ss_pred CCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccc
Confidence 38999999998 44333222211 2344444443 3444444554 35799999999999888777662 246
Q ss_pred cceEEEeccCC
Q 015550 152 VLSLALLNVTG 162 (405)
Q Consensus 152 v~~lvl~~~~~ 162 (405)
+.++|+.++..
T Consensus 235 F~raI~~SGs~ 245 (535)
T PF00135_consen 235 FHRAILQSGSA 245 (535)
T ss_dssp BSEEEEES--T
T ss_pred ccccccccccc
Confidence 99999999854
No 192
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.63 E-value=0.28 Score=43.30 Aligned_cols=77 Identities=19% Similarity=0.252 Sum_probs=51.0
Q ss_pred chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHH----HHHHh--
Q 015550 51 AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIA----LMDHL-- 124 (405)
Q Consensus 51 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~----~l~~l-- 124 (405)
.|+.+.+.|++ +||.|++.=+.- .++-...|+.+.. .++.+
T Consensus 35 tYr~lLe~La~----------------------~Gy~ViAtPy~~-----------tfDH~~~A~~~~~~f~~~~~~L~~ 81 (250)
T PF07082_consen 35 TYRYLLERLAD----------------------RGYAVIATPYVV-----------TFDHQAIAREVWERFERCLRALQK 81 (250)
T ss_pred HHHHHHHHHHh----------------------CCcEEEEEecCC-----------CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 58888999988 599999976631 2233333333322 22222
Q ss_pred --CC----ccEEEEEEChhHHHHHHHHHhCCcccceEEEecc
Q 015550 125 --GW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (405)
Q Consensus 125 --~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (405)
+. -+++-+|||+|+-+-+.+...++..-++-|+++-
T Consensus 82 ~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 82 RGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred hcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 22 2678899999999988888777655577788773
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.62 E-value=0.015 Score=49.49 Aligned_cols=78 Identities=21% Similarity=0.200 Sum_probs=48.4
Q ss_pred CCeEEEEecCCC---CCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc--ccceEEE
Q 015550 84 AGIEVCAFDNRG---MGRSSVPVKKTEYTTKIMAKDV-IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLAL 157 (405)
Q Consensus 84 ~g~~Vi~~D~~G---~G~S~~~~~~~~~~~~~~~~dl-~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 157 (405)
.||.|+..+.-- +-.+...+.+...+..+.+.-+ ..++.-...+.+.++.||+||...+.+..++|+ +|.++.|
T Consensus 143 ~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aial 222 (297)
T KOG3967|consen 143 EGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIAL 222 (297)
T ss_pred cCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEe
Confidence 499999887531 1112111211122333333322 233333456789999999999999999999985 5777777
Q ss_pred eccC
Q 015550 158 LNVT 161 (405)
Q Consensus 158 ~~~~ 161 (405)
-+++
T Consensus 223 TDs~ 226 (297)
T KOG3967|consen 223 TDSA 226 (297)
T ss_pred eccc
Confidence 7765
No 194
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.59 E-value=0.18 Score=50.38 Aligned_cols=78 Identities=17% Similarity=0.113 Sum_probs=55.7
Q ss_pred CCeEEEEecCCCCCCCCCCC---C---CCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 84 AGIEVCAFDNRGMGRSSVPV---K---KTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~---~---~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
+|+-.-....||=|.-.... + ....++.++++....+++.= ..+.++++|-|.||++.-..+.+.|+.++++
T Consensus 476 RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~i 555 (682)
T COG1770 476 RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGI 555 (682)
T ss_pred CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhhe
Confidence 58877777778866543211 1 12346666666666555532 2247999999999999999999999999999
Q ss_pred EEeccC
Q 015550 156 ALLNVT 161 (405)
Q Consensus 156 vl~~~~ 161 (405)
|+--|.
T Consensus 556 iA~VPF 561 (682)
T COG1770 556 IAQVPF 561 (682)
T ss_pred eecCCc
Confidence 987765
No 195
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.51 E-value=0.0068 Score=49.12 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
...+.+.++++.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 4455666666666657899999999999999988763
No 196
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.38 E-value=0.021 Score=55.03 Aligned_cols=105 Identities=21% Similarity=0.139 Sum_probs=64.2
Q ss_pred CCCeEEEEecCCCC---CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCC-eEEEEecCC----CCC-CCCCC---
Q 015550 35 GPTKVILITGLAGT---HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNR----GMG-RSSVP--- 102 (405)
Q Consensus 35 ~~p~vvllHG~~~~---~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g-~~Vi~~D~~----G~G-~S~~~--- 102 (405)
+.|++|+|||.+.. ......--..|++ +| +-|+.+++| |+= .|...
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~----------------------~g~vVvVSvNYRLG~lGfL~~~~~~~~~ 150 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDGSALAA----------------------RGDVVVVSVNYRLGALGFLDLSSLDTED 150 (491)
T ss_pred CCcEEEEEeccccccCCCcccccChHHHHh----------------------cCCEEEEEeCcccccceeeehhhccccc
Confidence 45899999997532 2221122244555 36 899999987 221 11111
Q ss_pred CCCCCCCHHHH---HHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCc---ccceEEEeccCC
Q 015550 103 VKKTEYTTKIM---AKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTG 162 (405)
Q Consensus 103 ~~~~~~~~~~~---~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 162 (405)
......-+.|+ .+.+.+-|+++|- ++|.|+|+|.||+.++.+.+. |. .+.++|+.++..
T Consensus 151 ~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 151 AFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred cccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 00011233333 3566677777764 579999999999998887664 43 477888888764
No 197
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.35 E-value=0.0074 Score=59.53 Aligned_cols=54 Identities=17% Similarity=0.173 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCC---------------cccceEEEeccCCCC
Q 015550 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVP---------------ERVLSLALLNVTGGG 164 (405)
Q Consensus 111 ~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p---------------~~v~~lvl~~~~~~~ 164 (405)
+++-..+..+++.. +-++|+|+||||||.+++.+..... ..|++.|.++++..+
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 33444444444432 3579999999999999998876421 248899999987433
No 198
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.11 E-value=0.039 Score=46.50 Aligned_cols=55 Identities=25% Similarity=0.270 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHhC-----CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCC
Q 015550 110 TKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (405)
-++-+.++..+++.|. ..++.++|||+|+.++-..+...+..+..+|++++++.+
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 4556677777877663 237899999999999988888767789999999988644
No 199
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.86 E-value=0.043 Score=52.80 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=63.4
Q ss_pred CeEEEEecCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhCC-------ccEEEEEEChhHHHHHHHHHhCCccc
Q 015550 85 GIEVCAFDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALMDHLGW-------KQAHVFGHSMGAMIACKLAAMVPERV 152 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l~~l~~-------~~v~lvGhS~Gg~ia~~~a~~~p~~v 152 (405)
|-.|+.+++|-+|.|.+.... ...+.++...|+.++|+++.. .+++.+|-|+-|.++..+=..+|+.+
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 789999999999998543321 134677888999999988732 28999999999999999999999999
Q ss_pred ceEEEeccCC
Q 015550 153 LSLALLNVTG 162 (405)
Q Consensus 153 ~~lvl~~~~~ 162 (405)
.+-|.-+.+.
T Consensus 198 ~GsvASSapv 207 (514)
T KOG2182|consen 198 VGSVASSAPV 207 (514)
T ss_pred eeecccccce
Confidence 8888777654
No 200
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.85 E-value=0.011 Score=56.54 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=44.3
Q ss_pred EEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc--------ccceEEEec
Q 015550 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLN 159 (405)
Q Consensus 88 Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~ 159 (405)
-..+|+| .|.......+..+..+..-++.....-|-+|++|++||||+.+.+.+...+++ .|++.+-++
T Consensus 146 ga~YDwR---ls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig 222 (473)
T KOG2369|consen 146 GAPYDWR---LSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIG 222 (473)
T ss_pred ccccchh---hccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccC
Confidence 4567776 22222221122333344444444444466899999999999999999988876 366777666
Q ss_pred cC
Q 015550 160 VT 161 (405)
Q Consensus 160 ~~ 161 (405)
.+
T Consensus 223 ~p 224 (473)
T KOG2369|consen 223 AP 224 (473)
T ss_pred ch
Confidence 54
No 201
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.83 E-value=0.38 Score=51.25 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=64.9
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC-CCCCCCCCCCHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS-SVPVKKTEYTTKIM 113 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S-~~~~~~~~~~~~~~ 113 (405)
..|++.|+|..-+......+++..|.- |-+|.- .... ..-+++..
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rle~--------------------------------PaYglQ~T~~v--P~dSies~ 2167 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRLEI--------------------------------PAYGLQCTEAV--PLDSIESL 2167 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhcCC--------------------------------cchhhhccccC--CcchHHHH
Confidence 456799999988877767666665532 222221 1111 13378888
Q ss_pred HHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCC--cccceEEEeccCC
Q 015550 114 AKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTG 162 (405)
Q Consensus 114 ~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 162 (405)
++-.+.-++.+.. .+..++|+|+|+.++..+|.... +....+|++++.+
T Consensus 2168 A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2168 AAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred HHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 8877777777754 58999999999999999987643 3456699998763
No 202
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.80 E-value=0.026 Score=49.74 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=34.4
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhC----CcccceEEEeccCC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVTG 162 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~ 162 (405)
+..+++..+ +++.+.|||.||.+|..+|... .++|.++...++++
T Consensus 75 l~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 75 LKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 334444444 4699999999999999998874 35789999999875
No 203
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.76 E-value=0.071 Score=51.61 Aligned_cols=131 Identities=14% Similarity=0.042 Sum_probs=75.8
Q ss_pred EEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec-CCCCCCCCC
Q 015550 27 IFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD-NRGMGRSSV 101 (405)
Q Consensus 27 i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D-~~G~G~S~~ 101 (405)
.+|.-.++ ..|.++.+.|.+|++..|..+.+.=..+.... .....+..+.-. -..-.++-+| .-|.|.|..
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~---~~P~~~~NP~SW-~~~adLvFiDqPvGTGfS~a 163 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSG---TSPSYPDNPGSW-LDFADLVFIDQPVGTGFSRA 163 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCC---CCCCCCCCcccc-ccCCceEEEecCcccCcccc
Confidence 44444453 35788999999999988876643221111100 000000000000 0245789999 569999975
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh-------CC--ccEEEEEEChhHHHHHHHHHhCCc---ccceEEEeccC
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHL-------GW--KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVT 161 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l-------~~--~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 161 (405)
......-++....+|+..+.+.+ .- .+.+|+|.|+||.-+..+|..--+ ..++++++.+.
T Consensus 164 ~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 164 LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 22222445556666666655543 22 489999999999998888865433 35666666654
No 204
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.40 E-value=0.035 Score=49.22 Aligned_cols=24 Identities=33% Similarity=0.307 Sum_probs=20.3
Q ss_pred CCccEEEEEEChhHHHHHHHHHhC
Q 015550 125 GWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 125 ~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 446899999999999999988753
No 205
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=95.09 E-value=0.22 Score=49.53 Aligned_cols=78 Identities=13% Similarity=0.033 Sum_probs=55.4
Q ss_pred CCeEEEEecCCCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 84 AGIEVCAFDNRGMGRSSVPVK------KTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~------~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
.|+-...-|.||=|.-..... +...+++++..-+.-+++.= ...+..+.|.|.||.++...+.++|+.+.++
T Consensus 498 ~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~av 577 (712)
T KOG2237|consen 498 RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAV 577 (712)
T ss_pred cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhh
Confidence 499889999999775532211 12335555555555555421 3457999999999999999999999999888
Q ss_pred EEeccC
Q 015550 156 ALLNVT 161 (405)
Q Consensus 156 vl~~~~ 161 (405)
|+--|.
T Consensus 578 ia~Vpf 583 (712)
T KOG2237|consen 578 IAKVPF 583 (712)
T ss_pred hhcCcc
Confidence 876554
No 206
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.06 E-value=0.045 Score=48.75 Aligned_cols=47 Identities=13% Similarity=0.301 Sum_probs=37.9
Q ss_pred HHHHHHHHH-h--CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 115 KDVIALMDH-L--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 115 ~dl~~~l~~-l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+.+.-+++. . ..++..++|||+||.+++.....+|+.+...++++|.
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 344444443 2 3356899999999999999999999999999999987
No 207
>PLN02162 triacylglycerol lipase
Probab=94.92 E-value=0.074 Score=51.23 Aligned_cols=51 Identities=12% Similarity=0.135 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh---C-----CcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM---V-----PERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~ 161 (405)
.++.+.+.+++......++++.|||+||.+|..+|.. + .+++.+++..+.+
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 3445555666666555689999999999999987652 1 1234556666654
No 208
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=94.85 E-value=0.041 Score=42.59 Aligned_cols=38 Identities=13% Similarity=0.239 Sum_probs=23.9
Q ss_pred cccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhh
Q 015550 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQ 55 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~ 55 (405)
-.++++|..|||...-+ +..||||+||++++-..|.++
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 34778999999966543 334799999999988776654
No 209
>PLN00413 triacylglycerol lipase
Probab=94.85 E-value=0.084 Score=51.00 Aligned_cols=51 Identities=18% Similarity=0.231 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh---C-----CcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM---V-----PERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~ 161 (405)
.++.+.+.++++.....++++.|||+||.+|..+|.. + ..++.++...+.+
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 3456677777777766789999999999999998752 1 2345566666654
No 210
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.63 E-value=0.081 Score=44.95 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=43.9
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhCCccEEEEEEChhHHHHHHHHHh------CCcccce
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMD----HLGWKQAHVFGHSMGAMIACKLAAM------VPERVLS 154 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~----~l~~~~v~lvGhS~Gg~ia~~~a~~------~p~~v~~ 154 (405)
...+..+++|-..... ....+..+-++++...++ .-.-.+++|+|+|+|+.++..++.. ..++|.+
T Consensus 39 ~~~~~~V~YpA~~~~~----~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~a 114 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN----SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAA 114 (179)
T ss_dssp EEEEEE--S---SCGG----SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEE
T ss_pred eeEEEecCCCCCCCcc----cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEE
Confidence 5777778877432211 011233444444444444 3345689999999999999999877 2367999
Q ss_pred EEEeccC
Q 015550 155 LALLNVT 161 (405)
Q Consensus 155 lvl~~~~ 161 (405)
+++++-+
T Consensus 115 vvlfGdP 121 (179)
T PF01083_consen 115 VVLFGDP 121 (179)
T ss_dssp EEEES-T
T ss_pred EEEecCC
Confidence 9999865
No 211
>PLN02571 triacylglycerol lipase
Probab=94.28 E-value=0.072 Score=50.85 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHh
Q 015550 111 KIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+++..++..+++..... ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45556677777665433 68999999999999998864
No 212
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.28 E-value=0.075 Score=50.14 Aligned_cols=105 Identities=14% Similarity=0.034 Sum_probs=77.0
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC-CCCCHH
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK-TEYTTK 111 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~-~~~~~~ 111 (405)
+...|+|+..-|.+....-.. .+++..+ +-+-+.+++|-+|.|.+.+.. ...+++
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r---~Ept~Ll---------------------d~NQl~vEhRfF~~SrP~p~DW~~Lti~ 115 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRR---SEPTQLL---------------------DGNQLSVEHRFFGPSRPEPADWSYLTIW 115 (448)
T ss_pred CCCCCeEEEecCcccccCccc---cchhHhh---------------------ccceEEEEEeeccCCCCCCCCcccccHh
Confidence 345677888888876543222 1232221 456788999999999765542 456889
Q ss_pred HHHHHHHHHHHHhC---CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 112 IMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 112 ~~~~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+-+.|...+++.+. ..+.+--|-|=||+.++.+=.-||+.|++.|.--.+
T Consensus 116 QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 116 QAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred HhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 99999998888773 357899999999999998888899999988865444
No 213
>PLN02454 triacylglycerol lipase
Probab=94.16 E-value=0.086 Score=50.28 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=22.8
Q ss_pred HHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHh
Q 015550 116 DVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 116 dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 147 (405)
.+..+++..... +|++.|||+||.+|+.+|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344444444333 49999999999999999864
No 214
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.71 E-value=0.15 Score=43.98 Aligned_cols=39 Identities=15% Similarity=0.078 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhC
Q 015550 110 TKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
..|..+....++++.+. ++++|+|||.|+++..++...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 45555566666666643 5899999999999999998764
No 215
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=93.70 E-value=0.36 Score=48.85 Aligned_cols=77 Identities=17% Similarity=0.112 Sum_probs=45.1
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCCCCHHHHHHH---HHHHHHHhC--CccEEEEEEChhHHHHHHHHHhC--Ccccc
Q 015550 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKD---VIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV--PERVL 153 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~~d---l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~ 153 (405)
..-|+.+.+| |+...........+-+.|+... +.+-|...| .++|.++|||.||..+..+.... ...+.
T Consensus 144 ~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~ 223 (545)
T KOG1516|consen 144 DVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFH 223 (545)
T ss_pred CEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHH
Confidence 6777777776 3322211111234455555444 444444554 46899999999999987776531 13466
Q ss_pred eEEEeccC
Q 015550 154 SLALLNVT 161 (405)
Q Consensus 154 ~lvl~~~~ 161 (405)
+.|.+++.
T Consensus 224 ~aI~~SG~ 231 (545)
T KOG1516|consen 224 KAISMSGN 231 (545)
T ss_pred HHHhhccc
Confidence 66666655
No 216
>PLN02408 phospholipase A1
Probab=93.23 E-value=0.14 Score=48.13 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.+.+..+++..+.. ++++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345555666655433 59999999999999998865
No 217
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.04 E-value=0.07 Score=50.19 Aligned_cols=87 Identities=17% Similarity=0.265 Sum_probs=50.1
Q ss_pred CCeEEEEecCCC-CCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC-CCCCHHHH
Q 015550 36 PTKVILITGLAG-THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK-TEYTTKIM 113 (405)
Q Consensus 36 ~p~vvllHG~~~-~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~-~~~~~~~~ 113 (405)
+..||+.||+.+ +...|...+........ +. .+..+|+-.....+.. -.+==+..
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk~p--------------------~~---~iv~~g~~~~~~~T~~Gv~~lG~Rl 136 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKKMP--------------------DK---LIVVRGKMNNMCQTFDGVDVLGERL 136 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcCCC--------------------cc---eEeeeccccchhhccccceeeeccc
Confidence 347999999988 56677777766665211 23 3333333222211111 11112334
Q ss_pred HHHHHHHHHHhCCccEEEEEEChhHHHHHHHH
Q 015550 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145 (405)
Q Consensus 114 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a 145 (405)
++++.+.+....++++..+|||+||.++..+.
T Consensus 137 a~~~~e~~~~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 137 AEEVKETLYDYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred HHHHhhhhhccccceeeeeeeecCCeeeeEEE
Confidence 55555555555578999999999999875543
No 218
>PLN02310 triacylglycerol lipase
Probab=92.84 E-value=0.3 Score=46.61 Aligned_cols=36 Identities=25% Similarity=0.236 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhC----CccEEEEEEChhHHHHHHHHHh
Q 015550 112 IMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 112 ~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
++.+.+..+++... ..++++.|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666666552 1379999999999999988854
No 219
>PLN02934 triacylglycerol lipase
Probab=92.73 E-value=0.19 Score=49.10 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHH
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 146 (405)
..+...+.++++.....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345566667777666678999999999999999874
No 220
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.49 E-value=0.25 Score=40.74 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=65.6
Q ss_pred CEEEEEEEccCCCCeEEEEecCCCCCCchhhh--HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 24 g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
+..+.+..+|.+..+||+.+--++....|..+ +..|+..... -..+.++++ |-..-+-
T Consensus 14 ~RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~------------------G~vQlft~~--gldsESf 73 (227)
T COG4947 14 NRDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEE------------------GLVQLFTLS--GLDSESF 73 (227)
T ss_pred cchhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhc------------------CcEEEEEec--ccchHhH
Confidence 45677888898655577777666665555432 2223221000 134555555 2221110
Q ss_pred CCCCCCCCHHHHHH---HHH-HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 102 PVKKTEYTTKIMAK---DVI-ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 102 ~~~~~~~~~~~~~~---dl~-~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
-.. ..+..+.++ ... -+++..-..+..+-|.||||..|..+..++|+...++|.+++.
T Consensus 74 ~a~--h~~~adr~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 74 LAT--HKNAADRAERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred hhh--cCCHHHHHHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 000 112222222 222 2233332356778899999999999999999999999999876
No 221
>PLN02324 triacylglycerol lipase
Probab=92.13 E-value=0.25 Score=47.22 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.+.+..+++...- .+|++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455666665543 269999999999999998864
No 222
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=91.90 E-value=0.24 Score=33.87 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=19.2
Q ss_pred ccccCCEEEEEEEc-c-C-------CCCeEEEEecCCCCCCchh
Q 015550 19 ALNDNGIKIFYRTY-G-R-------GPTKVILITGLAGTHDAWG 53 (405)
Q Consensus 19 ~~~~~g~~i~y~~~-G-~-------~~p~vvllHG~~~~~~~~~ 53 (405)
+.+-||+-|....- . . .+|+|++.||+.++++.|-
T Consensus 17 V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 17 VTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp EE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred EEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 35668887765332 2 2 3578999999999999883
No 223
>PLN02802 triacylglycerol lipase
Probab=91.52 E-value=0.31 Score=47.62 Aligned_cols=35 Identities=31% Similarity=0.361 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.+++..+++...- .+|++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 44455556655532 268999999999999988764
No 224
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.28 E-value=0.33 Score=47.53 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhC----CccEEEEEEChhHHHHHHHHHh
Q 015550 112 IMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 112 ~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+..+++..+++... ..++++.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44566667776553 2369999999999999988854
No 225
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=91.16 E-value=0.55 Score=44.07 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=29.5
Q ss_pred CCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccC
Q 015550 125 GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (405)
Q Consensus 125 ~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~ 161 (405)
|.+|+.|+|||+|+.+.......-.+ .|+.+++++.+
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 66799999999999998776654333 38999999876
No 226
>PLN02753 triacylglycerol lipase
Probab=91.07 E-value=0.35 Score=47.42 Aligned_cols=35 Identities=29% Similarity=0.309 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCC-----ccEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+...+..+++.... .+|++.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455566655432 479999999999999998853
No 227
>PLN02719 triacylglycerol lipase
Probab=90.85 E-value=0.39 Score=46.96 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCC-----ccEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.+.+..+++.... .+|++.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34455555555432 379999999999999998854
No 228
>PLN02761 lipase class 3 family protein
Probab=90.72 E-value=0.4 Score=47.02 Aligned_cols=35 Identities=31% Similarity=0.353 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhC-----C-ccEEEEEEChhHHHHHHHHH
Q 015550 112 IMAKDVIALMDHLG-----W-KQAHVFGHSMGAMIACKLAA 146 (405)
Q Consensus 112 ~~~~dl~~~l~~l~-----~-~~v~lvGhS~Gg~ia~~~a~ 146 (405)
++.+.+..+++..+ . -+|++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34455556665552 1 36999999999999998885
No 229
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.86 E-value=1.6 Score=38.44 Aligned_cols=77 Identities=19% Similarity=0.175 Sum_probs=47.2
Q ss_pred CeEEEEecCCCC-CC-CCCCCCCCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhC---C--c-ccce
Q 015550 85 GIEVCAFDNRGM-GR-SSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMV---P--E-RVLS 154 (405)
Q Consensus 85 g~~Vi~~D~~G~-G~-S~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~---p--~-~v~~ 154 (405)
|+.+..+++|.. +- +.........++.+=++.+.+.++.. .-++++++|+|+|+.++...+.+. + . ....
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 677888888861 11 00111112446666666777666652 236899999999999998877653 1 1 2335
Q ss_pred EEEeccC
Q 015550 155 LALLNVT 161 (405)
Q Consensus 155 lvl~~~~ 161 (405)
.|+++-+
T Consensus 82 fVl~gnP 88 (225)
T PF08237_consen 82 FVLIGNP 88 (225)
T ss_pred EEEecCC
Confidence 6666644
No 230
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.67 E-value=0.54 Score=44.28 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677888888888876789999999999999988864
No 231
>PLN02847 triacylglycerol lipase
Probab=88.63 E-value=0.79 Score=45.69 Aligned_cols=21 Identities=29% Similarity=0.437 Sum_probs=18.7
Q ss_pred ccEEEEEEChhHHHHHHHHHh
Q 015550 127 KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 127 ~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999998765
No 232
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=88.59 E-value=2.6 Score=41.77 Aligned_cols=77 Identities=17% Similarity=0.033 Sum_probs=52.6
Q ss_pred CeEEEEecCCCCCCCCCC-CCCCCCC-----------HHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCC
Q 015550 85 GIEVCAFDNRGMGRSSVP-VKKTEYT-----------TKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~-~~~~~~~-----------~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
||.+..-|- ||..+... ......+ +.+++.-..++++.+ ..+.-+..|.|.||.-++..|+++|
T Consensus 59 G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP 137 (474)
T PF07519_consen 59 GYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYP 137 (474)
T ss_pred CeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhCh
Confidence 999999995 66555321 1101122 222333334444443 3456899999999999999999999
Q ss_pred cccceEEEeccCC
Q 015550 150 ERVLSLALLNVTG 162 (405)
Q Consensus 150 ~~v~~lvl~~~~~ 162 (405)
+..++++.-+|..
T Consensus 138 ~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 138 EDFDGILAGAPAI 150 (474)
T ss_pred hhcCeEEeCCchH
Confidence 9999999988863
No 233
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.93 E-value=28 Score=32.87 Aligned_cols=65 Identities=3% Similarity=-0.014 Sum_probs=49.0
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHHhhcCCC
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKASEKKI 325 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~~~~~~~ 325 (405)
..+.+.+.+..|.++|....+++.+.. .-+.+-+-+.+ -|..++. .|..+.+...+|++......
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccccc
Confidence 467888999999999999888886544 12333334444 7888765 79999999999999987644
No 234
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=86.72 E-value=3.2 Score=38.81 Aligned_cols=63 Identities=10% Similarity=0.034 Sum_probs=46.7
Q ss_pred hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 258 ~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
.++.+|-.++.+..|...++..+....+.+....-+..+|+ .|...-. -+.+.|..|++....
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~---~i~esl~~flnrfq~ 389 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ---FIKESLEPFLNRFQM 389 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH---HHHHHHHHHHHHHhc
Confidence 45668999999999999999999999998855667888898 8876443 344455555555443
No 235
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=84.48 E-value=2.6 Score=35.90 Aligned_cols=60 Identities=20% Similarity=0.251 Sum_probs=42.8
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHH---HhCC-CeEEEEcCC-CccccccC---HHHHHHHHHHHHHh
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAE---KLYP-VARMIDLPG-GHLVSHER---TEEVNQALIDLIKA 320 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~---~l~~-~~~l~~~~g-gH~~~~e~---p~~v~~~i~~fl~~ 320 (405)
++++|-|-|+.|.|+.+-....-.+ .+.+ ....++.+| ||+..+.- .+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 3778889999999998765544444 3322 234556678 99887763 36899999999975
No 236
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.72 E-value=2.2 Score=42.38 Aligned_cols=37 Identities=30% Similarity=0.399 Sum_probs=26.5
Q ss_pred CccEEEEEEChhHHHHHHHHHh-----CCc------ccceEEEeccCC
Q 015550 126 WKQAHVFGHSMGAMIACKLAAM-----VPE------RVLSLALLNVTG 162 (405)
Q Consensus 126 ~~~v~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~~ 162 (405)
.++++.+||||||.++=.+... .|+ .-.++++++.+.
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 3589999999999887666543 232 356788888764
No 237
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=77.85 E-value=3.6 Score=37.76 Aligned_cols=76 Identities=25% Similarity=0.325 Sum_probs=54.5
Q ss_pred CeEEEEecCC-CCCCCCCCCCCCCC--CHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHhCCc----
Q 015550 85 GIEVCAFDNR-GMGRSSVPVKKTEY--TTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMVPE---- 150 (405)
Q Consensus 85 g~~Vi~~D~~-G~G~S~~~~~~~~~--~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~p~---- 150 (405)
.-.++.+|.| |.|.|-.... ..| +.++.+.|+.++++.+ ...|++++..|+||-+|..++...-+
T Consensus 71 ~adllfvDnPVGaGfSyVdg~-~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~ 149 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGS-SAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKR 149 (414)
T ss_pred hccEEEecCCCcCceeeecCc-ccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhc
Confidence 3467888887 8888854433 233 5678899999999876 34589999999999999998875422
Q ss_pred -----ccceEEEeccC
Q 015550 151 -----RVLSLALLNVT 161 (405)
Q Consensus 151 -----~v~~lvl~~~~ 161 (405)
...+++|-++.
T Consensus 150 G~i~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 150 GEIKLNFIGVALGDSW 165 (414)
T ss_pred CceeecceeEEccCcc
Confidence 24566665554
No 238
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=75.96 E-value=4 Score=36.75 Aligned_cols=28 Identities=25% Similarity=0.225 Sum_probs=22.3
Q ss_pred HHhCCccEEEEEEChhHHHHHHHHHhCC
Q 015550 122 DHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 122 ~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
+.....++.|-|||+||.+|..+..++.
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 271 RIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhccccC
Confidence 3334468999999999999998887763
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=75.96 E-value=4 Score=36.75 Aligned_cols=28 Identities=25% Similarity=0.225 Sum_probs=22.3
Q ss_pred HHhCCccEEEEEEChhHHHHHHHHHhCC
Q 015550 122 DHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 122 ~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
+.....++.|-|||+||.+|..+..++.
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 271 RIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhccccC
Confidence 3334468999999999999998887763
No 240
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=74.36 E-value=6.2 Score=39.13 Aligned_cols=71 Identities=21% Similarity=0.278 Sum_probs=51.4
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh----CC-------CeEEEEcCC-Ccccccc--CHHHHHHHHHHH
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL----YP-------VARMIDLPG-GHLVSHE--RTEEVNQALIDL 317 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l----~~-------~~~l~~~~g-gH~~~~e--~p~~v~~~i~~f 317 (405)
..+...+.-.-.+++.||..|.++|+....++++++ .. -.++..+|| +|..--. .+-.....|.+|
T Consensus 344 pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~W 423 (474)
T PF07519_consen 344 PDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDW 423 (474)
T ss_pred cCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHH
Confidence 345556666789999999999999987766666554 22 257888899 9977644 344677788888
Q ss_pred HHhhc
Q 015550 318 IKASE 322 (405)
Q Consensus 318 l~~~~ 322 (405)
+++-.
T Consensus 424 VE~G~ 428 (474)
T PF07519_consen 424 VENGK 428 (474)
T ss_pred HhCCC
Confidence 87543
No 241
>PRK12467 peptide synthase; Provisional
Probab=68.39 E-value=18 Score=45.87 Aligned_cols=100 Identities=19% Similarity=0.129 Sum_probs=70.3
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
+.+.+++.|...++...+.++...+.. +..|+.+..++.-.... ...+++.++
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~~l~~~l~~-----------------------~~~~~~l~~~~~~~d~~----~~~~~~~~~ 3743 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYEPLAVILEG-----------------------DRHVLGLTCRHLLDDGW----QDTSLQAMA 3743 (3956)
T ss_pred cccceeeechhhcchhhhHHHHHHhCC-----------------------CCcEEEEeccccccccC----CccchHHHH
Confidence 345699999999888888888877765 67888888776533222 133566677
Q ss_pred HHHHHHHHHhC-CccEEEEEEChhHHHHHHHHHh---CCcccceEEEeccC
Q 015550 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVT 161 (405)
Q Consensus 115 ~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~ 161 (405)
....+.+.... ..+..+.|+|+||.++..++.. ..+.+.-+.++...
T Consensus 3744 ~~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3744 VQYADYILWQQAKGPYGLLGWSLGGTLARLVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred HHHHHHHHHhccCCCeeeeeeecchHHHHHHHHHHHHcCCceeEEEEEecc
Confidence 76666666553 3578999999999999988764 34556666666443
No 242
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=68.20 E-value=1.3e+02 Score=29.77 Aligned_cols=104 Identities=21% Similarity=0.220 Sum_probs=64.5
Q ss_pred EEEEEccC-CCCeEEEEecCCCCCCchh--hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC
Q 015550 27 IFYRTYGR-GPTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (405)
Q Consensus 27 i~y~~~G~-~~p~vvllHG~~~~~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~ 103 (405)
++|..-|+ .+|..|..-|+-. .+-+. .+++.|.. =-.+.-|.|=-|.+--..
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~------------------------PfLL~~DpRleGGaFYlG 333 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGA------------------------PFLLIGDPRLEGGAFYLG 333 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcCC------------------------CeEEeeccccccceeeeC
Confidence 45566676 4566788888765 33333 23444432 234555777666663221
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHhCCcccceEEEec
Q 015550 104 KKTEYTTKIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (405)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 159 (405)
. ..| -+.+.+-|.+.++.||.+ .++|-|-|||..-|+.+++... -.++|+--
T Consensus 334 s-~ey-E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgK 387 (511)
T TIGR03712 334 S-DEY-EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGK 387 (511)
T ss_pred c-HHH-HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcC
Confidence 1 122 334556667788888875 6999999999999999998742 24555433
No 243
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=58.53 E-value=12 Score=37.31 Aligned_cols=72 Identities=18% Similarity=0.073 Sum_probs=40.5
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHH---HHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHh---CCcc-cceE
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK---DVIALMDHLGW--KQAHVFGHSMGAMIACKLAAM---VPER-VLSL 155 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~---dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~---~p~~-v~~l 155 (405)
|..|+.+|+-= .|......-+++.-- +++.-...+|+ ++|+++|-|.||.+.+..|.+ +.-| -++|
T Consensus 427 ~cPiiSVdYSL-----APEaPFPRaleEv~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl 501 (880)
T KOG4388|consen 427 GCPIISVDYSL-----APEAPFPRALEEVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGL 501 (880)
T ss_pred CCCeEEeeecc-----CCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCce
Confidence 88999999742 222222223333221 22222234565 589999999999876555543 1123 3677
Q ss_pred EEeccC
Q 015550 156 ALLNVT 161 (405)
Q Consensus 156 vl~~~~ 161 (405)
++.-++
T Consensus 502 ~laY~p 507 (880)
T KOG4388|consen 502 MLAYPP 507 (880)
T ss_pred EEecCh
Confidence 776543
No 244
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=57.89 E-value=11 Score=37.11 Aligned_cols=60 Identities=17% Similarity=0.146 Sum_probs=39.9
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHhC------CCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 262 FLVSVIHGRHDVIAQICYARRLAEKLY------PVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 262 ~Pvlvi~G~~D~~~~~~~~~~l~~~l~------~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
.+++..+|=.|..+|+-..+.-.+.++ ....+.++++||++.+++|+...+.+..|+...
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChHHHHHHHHHHHhhc
Confidence 345555555555555544433333331 234567788999999999999999999998763
No 245
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=55.52 E-value=14 Score=33.93 Aligned_cols=29 Identities=31% Similarity=0.469 Sum_probs=23.5
Q ss_pred HHHHHHhCCccEEEEEEChhHHHHHHHHH
Q 015550 118 IALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (405)
Q Consensus 118 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 146 (405)
.+++..+|+++-.++|||+|-..|+.++.
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 35566778999999999999988876654
No 246
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=55.33 E-value=8.4 Score=35.93 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=24.3
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHh
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.++++..|+++-.++|||+|=+.|+.++..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 3456677789999999999998888766543
No 247
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=52.87 E-value=17 Score=33.47 Aligned_cols=31 Identities=23% Similarity=0.156 Sum_probs=24.0
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHh
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.+++...|.++..++|||+|-..|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3455566788999999999999888776543
No 248
>TIGR03493 cellullose_BcsF celllulose biosynthesis operon protein BcsF/YhjT. Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process. Members average about 63 amino acids in length and are not uncharacterized. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F).
Probab=52.14 E-value=29 Score=23.32 Aligned_cols=35 Identities=34% Similarity=0.309 Sum_probs=21.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH----------hhccccee
Q 015550 361 PLEKLHLYLLYLCGLFLLAFEYARRLL----------QSLKPVRV 395 (405)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 395 (405)
++.-.-++-|.+|+|-.++-.+.|+++ |.+||+-|
T Consensus 6 ilQli~lcALIf~pLgyl~~r~~~r~r~~~r~~~~~pRYlKp~Gv 50 (62)
T TIGR03493 6 ILQLVLLCALIFFPLGYLARRSLRRIRTTLRLRLASPRYLKPAGV 50 (62)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHhcCCccccCccce
Confidence 344445566677888777766666654 45677654
No 249
>PRK10279 hypothetical protein; Provisional
Probab=51.98 E-value=19 Score=33.33 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=26.2
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
+.+.++..++..-.+.|-|+|+.++..||...
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 44556667888889999999999999999754
No 250
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=51.31 E-value=43 Score=28.90 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=46.9
Q ss_pred Ce-EEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEECh----hHHHHHHHHHhCC-cccceEEEe
Q 015550 85 GI-EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM----GAMIACKLAAMVP-ERVLSLALL 158 (405)
Q Consensus 85 g~-~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~----Gg~ia~~~a~~~p-~~v~~lvl~ 158 (405)
|. +|+..|.++. ..|+.+.+++.+.++++..+ ..++++|+|. |..++..+|.+.- ..+..++-+
T Consensus 76 G~d~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 76 GADRAILVSDRAF---------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CCCEEEEEecccc---------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 44 6777776533 25678889999999998887 6799999998 8889999888742 234444444
No 251
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=51.20 E-value=23 Score=29.61 Aligned_cols=33 Identities=27% Similarity=0.225 Sum_probs=25.4
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
+.+.++..++..-.+.|-|.|+.+|..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334444457777889999999999999998653
No 252
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=50.80 E-value=21 Score=33.10 Aligned_cols=33 Identities=30% Similarity=0.333 Sum_probs=26.5
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
-+.+.++..|+..-.++|-|+|+.++..+|...
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 445556666887778999999999999999864
No 253
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=48.78 E-value=19 Score=32.81 Aligned_cols=29 Identities=28% Similarity=0.318 Sum_probs=22.8
Q ss_pred HHHHHhC-CccEEEEEEChhHHHHHHHHHh
Q 015550 119 ALMDHLG-WKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 119 ~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
.++.+.+ +.+..++|||+|=+.|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 4455666 8999999999999888777654
No 254
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.83 E-value=41 Score=33.26 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=29.0
Q ss_pred hCCccEEEEEEChhHHHHHHHHHh-----CCcccceEEEeccC
Q 015550 124 LGWKQAHVFGHSMGAMIACKLAAM-----VPERVLSLALLNVT 161 (405)
Q Consensus 124 l~~~~v~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~ 161 (405)
+|.+||.|+|+|+|+.+....... .-..|..++|++.+
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaP 486 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAP 486 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCC
Confidence 478899999999999987754432 12358889999876
No 255
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=47.36 E-value=27 Score=29.62 Aligned_cols=31 Identities=29% Similarity=0.340 Sum_probs=23.8
Q ss_pred HHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 118 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
.+.++..++..=.+.|-|.||.+|..++...
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3344445667778999999999999999754
No 256
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=46.22 E-value=26 Score=32.52 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
-+.+.++..++..-.+.|-|+|+.++..+|...
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 455667777888999999999999999999854
No 257
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=45.49 E-value=29 Score=31.58 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=25.6
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
+.+.++..++..=.+.|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44555667877778899999999999999764
No 258
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.65 E-value=35 Score=29.94 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=23.1
Q ss_pred HHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 119 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
..++..+++.-.+.|-|.|+.+|..+|...
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 333445677778999999999999998654
No 259
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=43.03 E-value=38 Score=22.21 Aligned_cols=23 Identities=48% Similarity=0.856 Sum_probs=16.3
Q ss_pred HHHHHHHHHH--HHHHHHHHHhhcc
Q 015550 369 LLYLCGLFLL--AFEYARRLLQSLK 391 (405)
Q Consensus 369 ~~~~~~~~~~--~~~~~~~~~~~~~ 391 (405)
+.++.|+.++ =|+|.||+++..|
T Consensus 27 l~i~~GL~iLa~ef~wArr~l~~~~ 51 (53)
T PF09656_consen 27 LVIFLGLAILATEFPWARRLLRRLR 51 (53)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 4556788777 4678888887654
No 260
>PF03283 PAE: Pectinacetylesterase
Probab=42.86 E-value=1.2e+02 Score=28.99 Aligned_cols=35 Identities=29% Similarity=0.204 Sum_probs=23.9
Q ss_pred CccEEEEEEChhHHHHHHHHH----hCCcccceEEEecc
Q 015550 126 WKQAHVFGHSMGAMIACKLAA----MVPERVLSLALLNV 160 (405)
Q Consensus 126 ~~~v~lvGhS~Gg~ia~~~a~----~~p~~v~~lvl~~~ 160 (405)
.++++|.|.|.||.-++..+. ..|..++-..+.++
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 367999999999998887654 35654444444444
No 261
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=40.92 E-value=86 Score=25.72 Aligned_cols=49 Identities=27% Similarity=0.257 Sum_probs=33.6
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHH
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~ 144 (405)
|-.|++.|.+|- .++.+++++.+..+-+ .|-+=.+++|.|.|=--++..
T Consensus 67 ~~~vi~Ld~~Gk----------~~sSe~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 67 GSYVVLLDIRGK----------ALSSEEFADFLERLRD-DGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCeEEEEecCCC----------cCChHHHHHHHHHHHh-cCCeEEEEEeCcccCCHHHHH
Confidence 779999999873 5567777777665544 342335678999986655554
No 262
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=40.55 E-value=43 Score=26.59 Aligned_cols=12 Identities=33% Similarity=0.575 Sum_probs=6.3
Q ss_pred HHHHHhhcccce
Q 015550 383 ARRLLQSLKPVR 394 (405)
Q Consensus 383 ~~~~~~~~~~~~ 394 (405)
-||..|.++|++
T Consensus 24 rRR~r~G~~P~~ 35 (130)
T PF12273_consen 24 RRRRRRGLQPIY 35 (130)
T ss_pred HHHhhcCCCCcC
Confidence 344444466765
No 263
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=39.66 E-value=1.6e+02 Score=22.13 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=44.6
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhH--HHHHHHHHhCCcccceEEE
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA--MIACKLAAMVPERVLSLAL 157 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg--~ia~~~a~~~p~~v~~lvl 157 (405)
|+..=.+.++..|.+........ ..+.=...+..+++.+...+++++|=|--. -+-..+|.++|++|.++.+
T Consensus 24 ~~P~G~~~Lr~~~~~~~~~~~~~-~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 24 GFPAGPLLLRDYGPSLSGLFKSG-AEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred CCCCCceEcccCCccccccccCC-chhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 55555566666654422111001 112334567788888888899999976543 3445678889999988764
No 264
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=38.92 E-value=2.8e+02 Score=25.23 Aligned_cols=40 Identities=23% Similarity=0.321 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHH-HHhC-CccEEEEEEChhHHHHHHHHHhC
Q 015550 109 TTKIMAKDVIALM-DHLG-WKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 109 ~~~~~~~dl~~~l-~~l~-~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
.+++-+.+....+ +... .+++.++|.|-|+..|-.+|..-
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 3444444443333 4442 35799999999999999998653
No 265
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.09 E-value=44 Score=29.10 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=25.4
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
+.+.+...+...-.+.|.|.|+.+|..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 344455557666688999999999999998764
No 266
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=38.05 E-value=47 Score=27.79 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=23.5
Q ss_pred HHHHHhCCccEEEEEEChhHHHHHHHHHhCC
Q 015550 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 119 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
+.++..+...=.+.|-|.|+.+|..++...+
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3334456666788999999999999987654
No 267
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=37.26 E-value=36 Score=34.30 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=25.3
Q ss_pred HHHH-HHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 118 IALM-DHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 118 ~~~l-~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
.+++ +..|+++-.++|||+|=..|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 578999999999999999998887654
No 268
>COG3933 Transcriptional antiterminator [Transcription]
Probab=34.53 E-value=1.5e+02 Score=29.02 Aligned_cols=73 Identities=12% Similarity=0.171 Sum_probs=55.8
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
.+|..||.. +..+...++..|.+ .--+.++|+| .+.+..+..+.+
T Consensus 111 vIiiAHG~s-TASSmaevanrLL~-----------------------~~~~~aiDMP-----------Ldvsp~~vle~l 155 (470)
T COG3933 111 VIIIAHGYS-TASSMAEVANRLLG-----------------------EEIFIAIDMP-----------LDVSPSDVLEKL 155 (470)
T ss_pred EEEEecCcc-hHHHHHHHHHHHhh-----------------------ccceeeecCC-----------CcCCHHHHHHHH
Confidence 588889975 44556677777776 4568899997 467889999999
Q ss_pred HHHHHHhCCccEEEEEEChhHHHHHHHH
Q 015550 118 IALMDHLGWKQAHVFGHSMGAMIACKLA 145 (405)
Q Consensus 118 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a 145 (405)
.+-+++.+..+=.++=-.||...+..=.
T Consensus 156 ~e~~k~~~~~~GlllLVDMGSL~~f~~~ 183 (470)
T COG3933 156 KEYLKERDYRSGLLLLVDMGSLTSFGSI 183 (470)
T ss_pred HHHHHhcCccCceEEEEecchHHHHHHH
Confidence 9999988877756666699998766544
No 269
>PF11120 DUF2636: Protein of unknown function (DUF2636); InterPro: IPR019995 Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process []. Members average about 63 amino acids in length and are not uncharacterised. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F).
Probab=34.38 E-value=70 Score=21.71 Aligned_cols=30 Identities=20% Similarity=0.206 Sum_probs=21.4
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015550 360 GPLEKLHLYLLYLCGLFLLAFEYARRLLQS 389 (405)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (405)
.+++-.-++.+.+|+|-.++=+|.++.++.
T Consensus 5 DiiQii~l~AlI~~pLGyl~~~~~~r~~~~ 34 (62)
T PF11120_consen 5 DIIQIIILCALIFFPLGYLARRWLPRIRRT 34 (62)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhHHHHHH
Confidence 455666677788888888877777776654
No 270
>PRK02399 hypothetical protein; Provisional
Probab=33.60 E-value=4.4e+02 Score=25.56 Aligned_cols=99 Identities=22% Similarity=0.239 Sum_probs=60.6
Q ss_pred EEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC-------------
Q 015550 39 VILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK------------- 104 (405)
Q Consensus 39 vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~------------- 104 (405)
-|++-|-..+... +..+...+.. +|..|+.+|.-..|....+..
T Consensus 5 ~I~iigT~DTK~~E~~yl~~~i~~----------------------~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~ 62 (406)
T PRK02399 5 RIYIAGTLDTKGEELAYVKDLIEA----------------------AGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDG 62 (406)
T ss_pred EEEEEeccCCcHHHHHHHHHHHHH----------------------CCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCC
Confidence 3677777777743 4334444444 489999999844442211110
Q ss_pred ------C--CCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEec
Q 015550 105 ------K--TEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (405)
Q Consensus 105 ------~--~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 159 (405)
. ...-++.+++-+..++..+ .+.-++-+|-|+|..++.......|--+-+++.--
T Consensus 63 ~~~~~~~~dRg~ai~~M~~ga~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVST 129 (406)
T PRK02399 63 IEAVFCGGDRGSAMAAMAEGAAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVST 129 (406)
T ss_pred HHHhhcCccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEc
Confidence 0 0011244555555555543 34568889999999999999988887777766543
No 271
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=33.31 E-value=35 Score=34.50 Aligned_cols=34 Identities=12% Similarity=-0.108 Sum_probs=26.0
Q ss_pred EEEEEEChhHHHHHHHHHhCC-cccceEEEeccCC
Q 015550 129 AHVFGHSMGAMIACKLAAMVP-ERVLSLALLNVTG 162 (405)
Q Consensus 129 v~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~ 162 (405)
|+--+.|-||..++..|.+.- ..|++++...|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 455579999999999998754 3588888877653
No 272
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=32.44 E-value=4.3e+02 Score=24.90 Aligned_cols=56 Identities=27% Similarity=0.290 Sum_probs=34.6
Q ss_pred CcccccCCEEEEEEEccC------CCCeEEEEecCC--CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 17 DAALNDNGIKIFYRTYGR------GPTKVILITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~------~~p~vvllHG~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
+++-+..+-.+||...|+ ..++=+|+||.| ++...-...++.-.. +..|
T Consensus 186 ~Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGTitgvGRylke~~~-----------------------~~kV 242 (362)
T KOG1252|consen 186 DQFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGTITGVGRYLKEQNP-----------------------NIKV 242 (362)
T ss_pred HHhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCceeechhHHHHHhCC-----------------------CCEE
Confidence 344555666788988885 233356777654 444445555555544 7888
Q ss_pred EEecCCC
Q 015550 89 CAFDNRG 95 (405)
Q Consensus 89 i~~D~~G 95 (405)
+.+|.-+
T Consensus 243 v~vdp~~ 249 (362)
T KOG1252|consen 243 VGVDPQE 249 (362)
T ss_pred EEeCCCc
Confidence 8888654
No 273
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=31.82 E-value=31 Score=33.66 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=25.2
Q ss_pred HHHHHhCCccEEEEEEChhHHHHHHHHHhCCccc
Q 015550 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERV 152 (405)
Q Consensus 119 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v 152 (405)
..+...++.+=++.|-|.|+.+|..++...++.+
T Consensus 93 kaL~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 93 KALFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 3333346666689999999999999998766554
No 274
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=31.79 E-value=79 Score=26.29 Aligned_cols=30 Identities=27% Similarity=0.279 Sum_probs=22.5
Q ss_pred HHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 119 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
..++..+...=.+.|-|.|+.+|..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334444666668999999999999998653
No 275
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=29.83 E-value=1e+02 Score=25.39 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=29.2
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhH
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA 138 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg 138 (405)
+-.++++|-.|- .++-+++++.+..+...-.-+=+.++|-+.|=
T Consensus 67 ~~~~i~Ld~~Gk----------~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 67 NDYVILLDERGK----------QLSSEEFAKKLERWMNQGKSDIVFIIGGADGL 110 (155)
T ss_dssp TSEEEEE-TTSE----------E--HHHHHHHHHHHHHTTS-EEEEEE-BTTB-
T ss_pred CCEEEEEcCCCc----------cCChHHHHHHHHHHHhcCCceEEEEEecCCCC
Confidence 777899998873 66788888888887776332446789999983
No 276
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.83 E-value=74 Score=28.66 Aligned_cols=33 Identities=24% Similarity=0.188 Sum_probs=23.7
Q ss_pred HHHHHhCCc-cEEEEEEChhHHHHHHHHHhCCcc
Q 015550 119 ALMDHLGWK-QAHVFGHSMGAMIACKLAAMVPER 151 (405)
Q Consensus 119 ~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~ 151 (405)
+.+...++. .=.++|.|.|+.+|..++...+.+
T Consensus 18 ~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 18 DAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 333444555 448899999999999999876543
No 277
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=29.67 E-value=5.3e+02 Score=25.02 Aligned_cols=99 Identities=20% Similarity=0.208 Sum_probs=61.5
Q ss_pred EEEEecCCCCCC-chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC--------C---
Q 015550 39 VILITGLAGTHD-AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--------T--- 106 (405)
Q Consensus 39 vvllHG~~~~~~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~--------~--- 106 (405)
-|++-|-..+.. .+..+...+.+ .|.+|+.+|.-=.|.+..+..- .
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~----------------------~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~ 60 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEA----------------------QGVEVLLIDVGTLGEPSFPPDISREEVARAAGDS 60 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHH----------------------CCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCC
Confidence 456667776664 34445555555 4999999997555444322110 0
Q ss_pred ----------CCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEec
Q 015550 107 ----------EYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (405)
Q Consensus 107 ----------~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 159 (405)
...++.+++-+..++..+ .+.-++-+|-|.|..++.......|--+-+++.--
T Consensus 61 ~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST 127 (403)
T PF06792_consen 61 IEAVRSSGDRGEAIEAMARGAARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVST 127 (403)
T ss_pred hHHhhccCCHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEc
Confidence 011333444455555554 24568889999999999999988887777766543
No 278
>PF00976 ACTH_domain: Corticotropin ACTH domain; InterPro: IPR013531 Pro-opiomelanocortin is present in high levels in the pituitary and is processed into 3 major peptide families: adrenocorticotrophin (ACTH); alpha-, beta- and gamma-melanocyte- stimulating hormones (MSH); and beta-endorphin []. ACTH regulates the synthesis and release of glucocorticoids and, to some extent, aldosterone in the adrenal cortex. It is synthesised and released in response to corticotrophin-releasing factor at times of stress (i.e. heat, cold, infection, etc.), its release leading to increased metabolism. The action of MSH in man is poorly understood, but it may be involved in temperature regulation []. Full activity of ACTH resides in the first 20 N-terminal amino acids, the first 13 of which are identical to alpha-MSH [, ]. The function of this region is not known, though it is found near the centre of these proteins.
Probab=29.65 E-value=8.1 Score=22.91 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=17.9
Q ss_pred HHHHHHHHHhhcccceeccCCC
Q 015550 379 AFEYARRLLQSLKPVRVRASPT 400 (405)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~ 400 (405)
-|+|+.-+-|-.+||||-++..
T Consensus 6 hfrwgkp~g~KRRPvKVypn~~ 27 (39)
T PF00976_consen 6 HFRWGKPVGRKRRPVKVYPNGA 27 (39)
T ss_pred ceeccCCCCcccCcceeCCCCc
Confidence 4788888889999999987643
No 279
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=29.39 E-value=2.4e+02 Score=28.75 Aligned_cols=106 Identities=19% Similarity=0.290 Sum_probs=58.0
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC----CCCCCCCCCCCCCCHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG----MGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G----~G~S~~~~~~~~~~~~~~ 113 (405)
++=+--|.+-.......+.+.-.. ++-..+.+-|=+|..-..-| +|.-+.+..+ ....-
T Consensus 260 pLTLSiGvg~g~~~~~elg~vA~~--------------~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ek---rTRvR 322 (655)
T COG3887 260 PLTLSIGVGYGENNLIELGEVAQS--------------NLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEK---RTRVR 322 (655)
T ss_pred ceEEEEEeccCcccHHHHHHHHHH--------------hHHHHhccCCceEEEEcCCCceeeeCCCcchhHH---hHHHH
Confidence 577778887766655443321100 01112222366777765444 3433333221 12233
Q ss_pred HHHHHHHHHHh--CCccEEEEEE------ChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 114 AKDVIALMDHL--GWKQAHVFGH------SMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 114 ~~dl~~~l~~l--~~~~v~lvGh------S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
++++...+..+ ..++|+++|| +.|+.+++...+..-++ .+.+.++|.
T Consensus 323 aRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 323 ARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 44444333332 2579999999 78999998876665455 677878764
No 280
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=28.67 E-value=56 Score=31.43 Aligned_cols=38 Identities=21% Similarity=0.283 Sum_probs=27.4
Q ss_pred HHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 118 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
...+...|+.+=++.|-|.|+.+|..+|...++.+..+
T Consensus 102 ~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 102 VKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 33444456667789999999999999998655544443
No 281
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=28.47 E-value=78 Score=28.85 Aligned_cols=36 Identities=17% Similarity=0.107 Sum_probs=26.9
Q ss_pred ccEEEEEEChhHHHHHHHHH---hCCcccceEEEeccCC
Q 015550 127 KQAHVFGHSMGAMIACKLAA---MVPERVLSLALLNVTG 162 (405)
Q Consensus 127 ~~v~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~ 162 (405)
.+++|.|.|+|++-+..... ..-+++++.++.+++.
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 37999999999987655432 2335799999999863
No 282
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=28.40 E-value=33 Score=33.31 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=26.7
Q ss_pred HHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 120 LMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 120 ~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
.+...++.+=++.|-|.|+.+|..+|...++.+..+
T Consensus 88 aL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 88 ALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333346667789999999999999998666555444
No 283
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=28.21 E-value=42 Score=26.55 Aligned_cols=29 Identities=17% Similarity=0.123 Sum_probs=20.3
Q ss_pred cCCCCeEEEEecCCCCCCchh--hhHhhhcC
Q 015550 33 GRGPTKVILITGLAGTHDAWG--PQLKGLAG 61 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~--~~~~~L~~ 61 (405)
.+.+|.|+-+||+.|+...|- -+++.|-.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~ 79 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYK 79 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHh
Confidence 346777888999999998763 34455443
No 284
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=27.76 E-value=98 Score=28.81 Aligned_cols=18 Identities=28% Similarity=0.359 Sum_probs=15.6
Q ss_pred EEEEEChhHHHHHHHHHh
Q 015550 130 HVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 130 ~lvGhS~Gg~ia~~~a~~ 147 (405)
.+.|.|+||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 567999999999999853
No 285
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=27.33 E-value=42 Score=31.24 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=24.5
Q ss_pred HHHHHhCCccEEEEEEChhHHHHHHHHHhCCccc
Q 015550 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERV 152 (405)
Q Consensus 119 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v 152 (405)
..+...++.+-++.|-|.|+.+|..++...++.+
T Consensus 88 kaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 88 RTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 3333446667789999999999999987544433
No 286
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=26.20 E-value=1.9e+02 Score=23.80 Aligned_cols=46 Identities=26% Similarity=0.311 Sum_probs=30.5
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHH
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~i 140 (405)
+-.++++|-+|- .++-+++++.+..+.+.-.-+=++++|-+.|=--
T Consensus 67 ~~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~ 112 (157)
T PRK00103 67 GARVIALDERGK----------QLSSEEFAQELERWRDDGRSDVAFVIGGADGLSP 112 (157)
T ss_pred CCEEEEEcCCCC----------cCCHHHHHHHHHHHHhcCCccEEEEEcCccccCH
Confidence 456899998763 5677778888877644322244678888877433
No 287
>COG0218 Predicted GTPase [General function prediction only]
Probab=26.18 E-value=91 Score=26.84 Aligned_cols=60 Identities=17% Similarity=0.286 Sum_probs=35.9
Q ss_pred hhhcCCcEEEEeecCCccCCHHHH---HHHHHHh--CCCeE--EEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 257 IRSAGFLVSVIHGRHDVIAQICYA---RRLAEKL--YPVAR--MIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 257 l~~i~~Pvlvi~G~~D~~~~~~~~---~~l~~~l--~~~~~--l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+...++|++++.-.-|.+-.-+.. ....+.+ .+... ++.++. ... .-+++.+.|.+++..
T Consensus 131 l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~----Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 131 LLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKK----GIDELKAKILEWLKE 198 (200)
T ss_pred HHHcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEeccccc----CHHHHHHHHHHHhhc
Confidence 455678999999999999875554 3334333 12222 344432 221 146777778777754
No 288
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=25.92 E-value=2.6e+02 Score=21.38 Aligned_cols=73 Identities=10% Similarity=0.038 Sum_probs=43.7
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
.||.-|| .-.......++.+... .--.+.++++. ...+.+++.+.+
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~---------------------~~~~i~~~~~~-----------~~~~~~~~~~~l 47 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGE---------------------DQDNIEAVDLY-----------PDESIEDFEEKL 47 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTS---------------------TCSSEEEEEET-----------TTSCHHHHHHHH
T ss_pred EEEEECc--HHHHHHHHHHHHHcCC---------------------CcccEEEEECc-----------CCCCHHHHHHHH
Confidence 3677888 3444455666666651 01245555543 144788899999
Q ss_pred HHHHHHhCC-ccEEEEEEChhHHHHHHH
Q 015550 118 IALMDHLGW-KQAHVFGHSMGAMIACKL 144 (405)
Q Consensus 118 ~~~l~~l~~-~~v~lvGhS~Gg~ia~~~ 144 (405)
.+.++.+.. +.+.++-==.||.....+
T Consensus 48 ~~~i~~~~~~~~vlil~Dl~ggsp~n~a 75 (116)
T PF03610_consen 48 EEAIEELDEGDGVLILTDLGGGSPFNEA 75 (116)
T ss_dssp HHHHHHCCTTSEEEEEESSTTSHHHHHH
T ss_pred HHHHHhccCCCcEEEEeeCCCCccchHH
Confidence 999988864 456666544444443333
No 289
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=25.55 E-value=1e+02 Score=27.29 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=22.6
Q ss_pred HHHHHhCCc--cEEEEEEChhHHHHHHHHHhCC
Q 015550 119 ALMDHLGWK--QAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 119 ~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
+.+...++. .-.+.|-|.|+.+|..++...+
T Consensus 19 ~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 19 SLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 333344554 3479999999999999998653
No 290
>KOG4172 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=24.53 E-value=96 Score=20.37 Aligned_cols=24 Identities=29% Similarity=0.649 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Q 015550 368 YLLYLCGLFLLAFEYARRLLQSLK 391 (405)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~ 391 (405)
++||-.|-.-+-|+-++|+||.++
T Consensus 20 sVlYtCGHMCmCy~Cg~rl~~~~~ 43 (62)
T KOG4172|consen 20 SVLYTCGHMCMCYACGLRLKKALH 43 (62)
T ss_pred HHHHHcchHHhHHHHHHHHHHccC
Confidence 688999999999999999999765
No 291
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=24.27 E-value=6.5e+02 Score=24.22 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=54.1
Q ss_pred eEEEEecCCCCC-------CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 38 KVILITGLAGTH-------DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 38 ~vvllHG~~~~~-------~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
.||++||=+.+. +.|..+++.+.+ .--+-.+|.--+|.-+ .+
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~-----------------------r~lip~~D~AYQGF~~--------Gl 221 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKE-----------------------RGLIPFFDIAYQGFAD--------GL 221 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHH-----------------------cCCeeeeehhhhhhcc--------ch
Confidence 599999976654 458888887776 3345556766555443 13
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
++-+.-+..++... +-.++..|..=..+ .|.+||-++.+++..
T Consensus 222 eeDa~~lR~~a~~~---~~~lva~S~SKnfg-----LYgERVGa~~vva~~ 264 (396)
T COG1448 222 EEDAYALRLFAEVG---PELLVASSFSKNFG-----LYGERVGALSVVAED 264 (396)
T ss_pred HHHHHHHHHHHHhC---CcEEEEehhhhhhh-----hhhhccceeEEEeCC
Confidence 33444444444432 23788888765554 477999999999753
No 292
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=24.25 E-value=3.7e+02 Score=23.90 Aligned_cols=58 Identities=14% Similarity=0.064 Sum_probs=38.3
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Cccccc-----cCHHHHHHHHHHHHHhhc
Q 015550 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLIKASE 322 (405)
Q Consensus 262 ~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~-----e~p~~v~~~i~~fl~~~~ 322 (405)
.|++++||-.+.. .....+.+.+....+++.++- ||.-.- ...+.+.+.+.++++...
T Consensus 26 ~plvllHG~~~~~---~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~ 89 (276)
T TIGR02240 26 TPLLIFNGIGANL---ELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD 89 (276)
T ss_pred CcEEEEeCCCcch---HHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC
Confidence 5899999955432 234555666656677777775 665432 245678888888888765
No 293
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=23.83 E-value=75 Score=28.58 Aligned_cols=15 Identities=27% Similarity=0.700 Sum_probs=12.4
Q ss_pred CCccEEEEEEChhHH
Q 015550 125 GWKQAHVFGHSMGAM 139 (405)
Q Consensus 125 ~~~~v~lvGhS~Gg~ 139 (405)
.+..|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 446899999999975
No 294
>PF07589 VPEP: PEP-CTERM motif; InterPro: IPR013424 This entry describes a 25-residue region including an invariant Pro-Glu-Pro (PEP) motif, a thirteen residue strongly hydrophobic sequence likely to span the membrane, and a five-residue strongly basic motif that often contains four Arg residues. In most cases, this motif is found within nine residues of the C-terminal end of the protein. Proteins containing this motif typically have signal sequences at the N terminus [].
Probab=23.38 E-value=97 Score=16.68 Aligned_cols=13 Identities=46% Similarity=0.475 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHH
Q 015550 368 YLLYLCGLFLLAF 380 (405)
Q Consensus 368 ~~~~~~~~~~~~~ 380 (405)
..++.+|++.+.+
T Consensus 8 ~~l~~~gl~~l~~ 20 (25)
T PF07589_consen 8 LALLGLGLLGLAF 20 (25)
T ss_pred HHHHHHHHHHHHH
Confidence 4466667766666
No 295
>TIGR03141 cytochro_ccmD heme exporter protein CcmD. The model for this protein family describes a small, hydrophobic, and only moderately well-conserved protein, tricky to identify accurately for all of these reasons. However, members are found as part of large operons involved in heme export across the inner membrane for assembly of c-type cytochromes in a large number of bacteria. The gray zone between the trusted cutoff (13.0) and noise cutoff (4.75) includes both low-scoring examples and false-positive matches to hydrophobic domains of longer proteins.
Probab=23.08 E-value=1.4e+02 Score=18.64 Aligned_cols=30 Identities=33% Similarity=0.439 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015550 362 LEKLHLYLLYLCGLFLLAFEYARRLLQSLK 391 (405)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (405)
+...-++++.+.++++......|++.|.++
T Consensus 9 W~sYg~t~l~l~~li~~~~~~~r~~~~~l~ 38 (45)
T TIGR03141 9 WLAYGITALVLAGLILWSLLDRRRLLRELR 38 (45)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445666777778888888888888765
No 296
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=22.03 E-value=1.4e+02 Score=26.66 Aligned_cols=20 Identities=30% Similarity=0.433 Sum_probs=17.9
Q ss_pred EEEEEChhHHHHHHHHHhCC
Q 015550 130 HVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 130 ~lvGhS~Gg~ia~~~a~~~p 149 (405)
.+.|-|.|+.+|..+|...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998653
No 297
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=21.91 E-value=46 Score=27.48 Aligned_cols=47 Identities=19% Similarity=0.246 Sum_probs=26.8
Q ss_pred CCCCCCCCCCC-CCCCCCHHHHHHHH----HHHHHHh----CCccEEEEEEChhHH
Q 015550 93 NRGMGRSSVPV-KKTEYTTKIMAKDV----IALMDHL----GWKQAHVFGHSMGAM 139 (405)
Q Consensus 93 ~~G~G~S~~~~-~~~~~~~~~~~~dl----~~~l~~l----~~~~v~lvGhS~Gg~ 139 (405)
+-|||+..... ....++.++++.-+ ..+.+.. ..++|.|+|.|++..
T Consensus 61 lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 45888772111 11467888888888 4444444 235799999998887
No 298
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=21.19 E-value=1.3e+02 Score=21.39 Aligned_cols=25 Identities=36% Similarity=0.391 Sum_probs=19.0
Q ss_pred hCCccEEEEEEChhHHHHHHHHHhC
Q 015550 124 LGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 124 l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
-+.+++-++|-|-|=.+|...+..+
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCCceEEEEecCCcccHHHHHHHHh
Confidence 3557899999999999998877765
No 299
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=21.04 E-value=4.2e+02 Score=22.58 Aligned_cols=35 Identities=29% Similarity=0.359 Sum_probs=25.7
Q ss_pred CCeEEEEecCCCCCCch--hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 36 PTKVILITGLAGTHDAW--GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~--~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
++.+|.+.|+.++..+- ..+.+.|.+ .|++++..|
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~----------------------~G~~~y~LD 58 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFA----------------------KGYHVYLLD 58 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHH----------------------cCCeEEEec
Confidence 45799999999888652 233445555 599999998
No 300
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=20.85 E-value=2e+02 Score=19.37 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=27.2
Q ss_pred CCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 288 YPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 288 ~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
.|+..+....|-+++-.|.++++.+.+.+|-++.
T Consensus 25 ~PDTvItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 25 TPDTVITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred cCCeEEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 3776666666777888899999999999997654
No 301
>PF15161 Neuropep_like: Neuropeptide-like
Probab=20.68 E-value=71 Score=21.00 Aligned_cols=16 Identities=50% Similarity=0.715 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhhcccc
Q 015550 378 LAFEYARRLLQSLKPV 393 (405)
Q Consensus 378 ~~~~~~~~~~~~~~~~ 393 (405)
-+||+++|.+.-+|+-
T Consensus 20 HAFefmqRALQdlkkt 35 (65)
T PF15161_consen 20 HAFEFMQRALQDLKKT 35 (65)
T ss_pred HHHHHHHHHHhhhhhc
Confidence 3799999999998874
No 302
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=20.66 E-value=1.1e+02 Score=28.15 Aligned_cols=29 Identities=24% Similarity=0.294 Sum_probs=22.6
Q ss_pred hCCccEEEEEEChhHHHHHHHHHhCCccc
Q 015550 124 LGWKQAHVFGHSMGAMIACKLAAMVPERV 152 (405)
Q Consensus 124 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v 152 (405)
.++.+-++.|.|.|+.+|..++....+.+
T Consensus 94 ~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 94 QDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred cCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 45566689999999999999998654444
No 303
>PF04995 CcmD: Heme exporter protein D (CcmD); InterPro: IPR007078 The CcmD protein is part of a C-type cytochrome biogenesis operon []. The exact function of this protein is uncertain. It has been proposed that CcmC, CcmD and CcmE interact directly with each other, establishing a cytoplasm to periplasm haem delivery pathway for cytochrome c maturation []. This protein is found fused to CcmE in P52224 from SWISSPROT. These proteins contain a predicted transmembrane helix.; GO: 0006810 transport, 0016021 integral to membrane
Probab=20.66 E-value=1.7e+02 Score=18.34 Aligned_cols=28 Identities=32% Similarity=0.462 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015550 364 KLHLYLLYLCGLFLLAFEYARRLLQSLK 391 (405)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (405)
-.-++++.+.++++......|++.+.++
T Consensus 10 sYg~t~~~l~~l~~~~~~~~r~~~~~l~ 37 (46)
T PF04995_consen 10 SYGVTALVLAGLIVWSLRRRRRLRKELK 37 (46)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666677777777777888877664
Done!