Citrus Sinensis ID: 015552

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
Protein Sequence
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Secondary Structure (PSIPRED)
ccccccccccccEEEEcccccccHHHHHHHHccccccccccccccccccHHHHHHHHHcccccccccccccccccccEEEEccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccHHHHHHcccccccccccHHHHHHHHHcEEEEEEEEccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEccccccHHHHHHHHHHHcccccccccccccccccHEEEHHHHHHccccccccccccccccEEEEEccccccHHHHHHHHHHHHccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccHHHHHHcccccccccccHHHHHHHHHHHHEEEEEcccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mgkkkkrvssKVWCYycdrefddEKILVQHQKakhfkchvchkklstaggMAIHVLQVHKenvtkvpnakpgrestdieiygmqgippdvlaahygeeeeevpskmakvdtsfpqlvggvvpgqlgvsyppqstlgmmqpisavpvppagwpvpprpqpwypqhaavsipppaavgyaqqplfpvqnvrpplasstspalqpspvvppgmpsstppvtvsqplfpvvnnnttsqsslfsapipstsialsssaeikgsvdahssantsvtnsyhvpsmqggtlsnshsyasgpntggpsigpppviankapatqpavnEVYLVWEDEAMSMEERRMSSVkyqvhdetsqVSYNYLFKIWSWFvfsnqmdrpyvscfqiSCLRFVTYLERYFLYEFQFFFFLIFTK
Flexible Loop (DISEMBL)
mgkkkkrvsskvWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHkenvtkvpnakpgrESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Low Complexity Region (SEG)
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFpqlvggvvpgqlgvSYPPQSTLGMMQPISavpvppagwpvpprpqpwypqHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALqpspvvppgmpsstppvtvsqpLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTyleryflyefqfffflifTK
Disordered region (IsUnstruct)
**********KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT*************IEIYGMQGIPPDVLAAH******************FPQLVGGVVPGQLGVSY******************************WYPQHAAVSI***AAVGYAQ****************************************************************************************************************************************AVNEVYLVWED**************YQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIF**
Disordered Region (DISOPRED)
*********SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT*V***K*GRESTDIEIYGMQGI********************************************************************************************************************************************************************************************************************************************VWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Disordered Region (DISEMBL)
**********KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG**********AKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVR************PSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Disordered Region (DISPRO)
********SSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE****************************SYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNN*TSQSSLFSA******************************************************************************EVYL*WEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	405	2.2.26 [Sep-21-2011]
O43670	478	Zinc finger protein 207 O	yes	no	0.212	0.179	0.678	4e-33
Q5R8K4	494	Zinc finger protein 207 O	yes	no	0.212	0.174	0.678	2e-32

>sp|O43670|ZN207_HUMAN Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1

 Score =  142 bits (358), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 72/87 (82%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

Homo sapiens (taxid: 9606)

>sp|Q5R8K4|ZN207_PONAB Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1

 Score =  140 bits (354), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILTQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
224074127	385	predicted protein [Populus trichocarpa]	0.854	0.898	0.739	1e-146
357521469	465	Zinc finger protein [Medicago truncatula	0.955	0.832	0.683	1e-141
357521467	374	Zinc finger protein [Medicago truncatula	0.849	0.919	0.727	1e-135
297738020	375	unnamed protein product [Vitis vinifera]	0.864	0.933	0.723	1e-133
356524640	371	PREDICTED: uncharacterized protein LOC10	0.854	0.932	0.749	1e-131
225423609	362	PREDICTED: uncharacterized protein LOC10	0.832	0.930	0.704	1e-130
224138544	363	predicted protein [Populus trichocarpa]	0.837	0.933	0.740	1e-129
356513020	371	PREDICTED: uncharacterized protein LOC10	0.854	0.932	0.735	1e-128
449433517	372	PREDICTED: uncharacterized protein LOC10	0.859	0.935	0.742	1e-126
356524642	359	PREDICTED: uncharacterized protein LOC10	0.827	0.933	0.737	1e-125

>gi|224074127|ref|XP_002304263.1| predicted protein [Populus trichocarpa] gi|222841695|gb|EEE79242.1| predicted protein [Populus trichocarpa]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 273/369 (73%), Positives = 294/369 (79%), Gaps = 23/369 (6%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKR +SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRAASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE+E PSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEDENPSKAAKVDIPSAQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPI-----------------SAVPVPPAGWPVPPRPQPWYPQ 163
           VPG LG  YPP+  L  MQP+                 SAVP P AGWPVPPR Q W PQ
Sbjct: 121 VPGPLGAGYPPRP-LAAMQPMSGPCTLGPVKLWNYLYNSAVPAPHAGWPVPPRSQHWLPQ 179

Query: 164 HAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPL 223
           H AVSIPPPA + Y QQPLFPVQNVRPP+ S+ +PAL PS V PPG+PSSTP  +VSQPL
Sbjct: 180 HPAVSIPPPAPITYTQQPLFPVQNVRPPVPSTMTPALIPSQVTPPGLPSSTP--SVSQPL 237

Query: 224 FPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQG-GT 282
           FPV  NN   QSS FSAP PSTS+  SS AE++GS++ H   NTS+T  Y   S    GT
Sbjct: 238 FPV--NNNLPQSSTFSAPFPSTSLLPSSPAEVRGSMNVHLGVNTSMTTGYLTQSASASGT 295

Query: 283 LSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQ 342
           L N+HSYASGPNTGGPSIGPPPVIANKAP  QPAVNEVYLVW+DEAMSMEERRMS  KYQ
Sbjct: 296 LGNTHSYASGPNTGGPSIGPPPVIANKAPVIQPAVNEVYLVWDDEAMSMEERRMSLPKYQ 355

Query: 343 VHDETSQVS 351
           VHDETSQ+S
Sbjct: 356 VHDETSQMS 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521469|ref|XP_003631023.1| Zinc finger protein [Medicago truncatula] gi|355525045|gb|AET05499.1| Zinc finger protein [Medicago truncatula]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 279/408 (68%), Positives = 314/408 (76%), Gaps = 21/408 (5%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MG+KKKRV+SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM+IHVLQVHK
Sbjct: 1   MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           ENVTKVPNAKPGREST+IEIYGMQGIPPDVLAAHYG+E+++VPSK AKVD       GG+
Sbjct: 61  ENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPI--SAVPVPPAGWP-VPPRPQPWYPQHAAVSIPPPAAVGY 177
           VP  +G  YPP+ST+G ++PI   AVP PP  W  VPPRPQPW+PQ   VS+  P  V Y
Sbjct: 121 VPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSM--PPPVQY 178

Query: 178 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSS 236
            QQPLFPVQNVRPPL S+TSPALQ S + PPG+PSSTPPV VSQPLFPVV NN+  +QSS
Sbjct: 179 PQQPLFPVQNVRPPLPSTTSPALQ-SQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQSS 237

Query: 237 LFSAP-----IPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYAS 291
            FSA      +PS +  LSS+  I    DAH   N+SVT+SY    + GG  SNSHSYAS
Sbjct: 238 PFSAAPMSSSVPSITPGLSSNVPI----DAHLGINSSVTSSYQAIGIPGGIASNSHSYAS 293

Query: 292 GPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 351
           GPNTGGPSIGPPPVI+NKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQVS
Sbjct: 294 GPNTGGPSIGPPPVISNKAPATQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQVS 353

Query: 352 YNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLER-YFLYEFQFF 398
                 +   F  SNQM R Y  CFQI   +  T+++R  F    Q F
Sbjct: 354 RTTFLLLGVAFT-SNQMSRLYAFCFQI---QLFTHIKRGTFCISLQSF 397

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521467|ref|XP_003631022.1| Zinc finger protein [Medicago truncatula] gi|355525044|gb|AET05498.1| Zinc finger protein [Medicago truncatula]

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/360 (72%), Positives = 293/360 (81%), Gaps = 16/360 (4%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MG+KKKRV+SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM+IHVLQVHK
Sbjct: 1   MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           ENVTKVPNAKPGREST+IEIYGMQGIPPDVLAAHYG+E+++VPSK AKVD       GG+
Sbjct: 61  ENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPI--SAVPVPPAGWP-VPPRPQPWYPQHAAVSIPPPAAVGY 177
           VP  +G  YPP+ST+G ++PI   AVP PP  W  VPPRPQPW+PQ   VS+  P  V Y
Sbjct: 121 VPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSM--PPPVQY 178

Query: 178 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSS 236
            QQPLFPVQNVRPPL S+TSPALQ S + PPG+PSSTPPV VSQPLFPVV NN+  +QSS
Sbjct: 179 PQQPLFPVQNVRPPLPSTTSPALQ-SQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQSS 237

Query: 237 LFSAP-----IPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYAS 291
            FSA      +PS +  LSS+  I    DAH   N+SVT+SY    + GG  SNSHSYAS
Sbjct: 238 PFSAAPMSSSVPSITPGLSSNVPI----DAHLGINSSVTSSYQAIGIPGGIASNSHSYAS 293

Query: 292 GPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 351
           GPNTGGPSIGPPPVI+NKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQ+S
Sbjct: 294 GPNTGGPSIGPPPVISNKAPATQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQMS 353

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738020|emb|CBI27221.3| unnamed protein product [Vitis vinifera]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/355 (72%), Positives = 295/355 (83%), Gaps = 5/355 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRV++KVWCYYCDREF+DEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E V+KVPNAKPGREST+IEIYGM+GIP ++LAAHYGEE+E+VPSK+AKV+    QL GG 
Sbjct: 61  ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 121 VPGQLGVSYPPQSTLGMMQPI--SAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 178
           VPG LG+  PPQ  LG M P+   A+ VPPAGWPVP RPQPWY QH A+SI PPA +G  
Sbjct: 121 VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISI-PPAPLGMT 179

Query: 179 QQPLFPVQNVRPPLASSTSPALQPS-PVVPPGMPSSTPPVTVSQPLFPV-VNNNTTSQSS 236
           QQPLFP+Q V+PPL S+ S ALQPS  + PPG+P  +P   + QPLFPV VNNN  +++S
Sbjct: 180 QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 237 LFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 296
            FS P+ STSI LSS AE+  S++AHSS N+S+ +SY  PS+QGG   NSHSYASGPNTG
Sbjct: 240 PFSTPMLSTSIPLSSQAELNSSIEAHSSTNSSLASSYSAPSIQGGPSINSHSYASGPNTG 299

Query: 297 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 351
           GPSIGPPPVIANK PATQPA NEVYLVW+DEAMSMEERRMS +KYQVHDETSQ+S
Sbjct: 300 GPSIGPPPVIANKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHDETSQMS 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524640|ref|XP_003530936.1| PREDICTED: uncharacterized protein LOC100819009 isoform 1 [Glycine max]

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 266/355 (74%), Positives = 296/355 (83%), Gaps = 9/355 (2%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE++VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPI--SAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 178
           +P  LG  YPP+ TL  M P+   AVPVPP  W VPPRPQPW+ Q  AVS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPPRPTLPTMPPMYNPAVPVPPNAWMVPPRPQPWFSQPPAVSVPP--AAPYT 178

Query: 179 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 237
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSST 235

Query: 238 FSA-PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 296
           FSA P+PS+  +++S       VD H S+N+SVT+SY    + GG  SNSHSYASGPNTG
Sbjct: 236 FSAPPLPSSVPSVTSVMSANVPVDTHLSSNSSVTSSYQAIGIPGGAASNSHSYASGPNTG 295

Query: 297 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 351
           GPSIGPPPVIANKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQ+S
Sbjct: 296 GPSIGPPPVIANKAPATQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMS 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423609|ref|XP_002274291.1| PREDICTED: uncharacterized protein LOC100266425 [Vitis vinifera]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/355 (70%), Positives = 285/355 (80%), Gaps = 18/355 (5%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRV++KVWCYYCDREF+DEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E V+KVPNAKPGREST+IEIYGM+GIP ++LAAHYGEE+E+VPSK+AKV+    QL GG 
Sbjct: 61  ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 121 VPGQLGVSYPPQSTLGMMQPI--SAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 178
           VPG LG+  PPQ  LG M P+   A+ VPPAGWPVP RPQPWY QH A+SI PPA +G  
Sbjct: 121 VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISI-PPAPLGMT 179

Query: 179 QQPLFPVQNVRPPLASSTSPALQPS-PVVPPGMPSSTPPVTVSQPLFPV-VNNNTTSQSS 236
           QQPLFP+Q V+PPL S+ S ALQPS  + PPG+P  +P   + QPLFPV VNNN  +++S
Sbjct: 180 QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 237 LFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 296
            FS P+ STSI LSS AE+  S++AHSS N+             G   NSHSYASGPNTG
Sbjct: 240 PFSTPMLSTSIPLSSQAELNSSIEAHSSTNS-------------GPSINSHSYASGPNTG 286

Query: 297 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 351
           GPSIGPPPVIANK PATQPA NEVYLVW+DEAMSMEERRMS +KYQVHDETSQ+S
Sbjct: 287 GPSIGPPPVIANKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHDETSQMS 341

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138544|ref|XP_002326629.1| predicted protein [Populus trichocarpa] gi|222833951|gb|EEE72428.1| predicted protein [Populus trichocarpa]

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/354 (74%), Positives = 287/354 (81%), Gaps = 15/354 (4%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPDVLA+HYG++E+E PSK AK D    Q +GG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDVLASHYGDDEDETPSKAAKGDIPSAQRIGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPISAVPVP---PAGWPVPPRPQPWYPQHAAVSIPPPAAVGY 177
           +PG L   YPPQ  LG MQPI    +P   P    +PPRPQPW+P H AVSI P A + Y
Sbjct: 121 MPGPLSTGYPPQP-LGAMQPIGPTLIPAYTPTKNEIPPRPQPWFPTHPAVSISPSAPIAY 179

Query: 178 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSL 237
           AQQPLFPVQN+RPP+ S+TS AL PS   PPG+PSSTPP  VSQPLFPVVNNN   QSS 
Sbjct: 180 AQQPLFPVQNMRPPVPSTTSIALPPSQTPPPGLPSSTPP--VSQPLFPVVNNN-LPQSSP 236

Query: 238 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGG 297
           FSAP+P TSI+ SS  E+KGSV+ HS  N+S+T  Y           N+HSYASGPNTGG
Sbjct: 237 FSAPLPPTSISSSSPGEVKGSVNVHSGVNSSMTTGY--------LPGNTHSYASGPNTGG 288

Query: 298 PSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 351
           PSIGPPPVIANKAPATQ AVNEVYLVW+DEAMSMEERRMS  KYQVHDETSQ+S
Sbjct: 289 PSIGPPPVIANKAPATQTAVNEVYLVWDDEAMSMEERRMSLPKYQVHDETSQMS 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513020|ref|XP_003525212.1| PREDICTED: uncharacterized protein LOC100789368 [Glycine max]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/355 (73%), Positives = 291/355 (81%), Gaps = 9/355 (2%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE++VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPI--SAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 178
           +P  LG  YP +  L  M P+   AVPVPP  W VPPRPQPW+ Q   VS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPSRPALPTMPPVYNPAVPVPPNAWVVPPRPQPWFSQPPVVSVPP--AAPYT 178

Query: 179 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 237
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSSA 235

Query: 238 FSA-PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 296
           FSA P+PS+  +++        VD H S+N+SVT+SY    + GG  SNSHSYASGPNTG
Sbjct: 236 FSAPPLPSSVPSVTPVMSTNVPVDTHLSSNSSVTSSYQAIGVPGGAASNSHSYASGPNTG 295

Query: 297 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 351
           GPSIGPPPVIANKAPA QPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQ+S
Sbjct: 296 GPSIGPPPVIANKAPAPQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMS 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433517|ref|XP_004134544.1| PREDICTED: uncharacterized protein LOC101206973 [Cucumis sativus] gi|449506782|ref|XP_004162847.1| PREDICTED: uncharacterized protein LOC101227282 [Cucumis sativus]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/354 (74%), Positives = 291/354 (82%), Gaps = 6/354 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRE+TDIEIYGMQGIPPDVLAAHYGEEEEE  SK+AKV+    Q+VGGV
Sbjct: 61  ESVTKVPNAKPGREATDIEIYGMQGIPPDVLAAHYGEEEEESLSKVAKVEMPSTQMVGGV 120

Query: 121 VPGQLGVSYPPQSTLGMMQPI--SAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 178
           VPG LG+ YPPQ  L  MQPI  S     P  WPVPPRPQPW+P ++AVSIPPP  +GYA
Sbjct: 121 VPGSLGIMYPPQPGLASMQPIYPSTGQAQPTAWPVPPRPQPWFPPNSAVSIPPPVQLGYA 180

Query: 179 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTT-SQSSL 237
           QQPLFPVQ  RPPL  S++P LQP  + PPG+ S+TP  +VSQPLFPVV+N+   +QSS 
Sbjct: 181 QQPLFPVQTARPPLPVSSTPMLQPLQITPPGLTSTTPTASVSQPLFPVVSNSHGPTQSSP 240

Query: 238 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGG 297
           FS+   S SI L+S+A+IKGSV  H   N S T    V ++ GG LSNSHSYASGPNTGG
Sbjct: 241 FSSSTLSASIPLTSAADIKGSV-THLGTNFS-TIGNQVANIPGGILSNSHSYASGPNTGG 298

Query: 298 PSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 351
           PSIGPPPVIANKAP TQP+ NEVYLVW+DEAMSMEERRMS  KYQVHDETSQ+S
Sbjct: 299 PSIGPPPVIANKAP-TQPSTNEVYLVWDDEAMSMEERRMSLTKYQVHDETSQMS 351

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524642|ref|XP_003530937.1| PREDICTED: uncharacterized protein LOC100819009 isoform 2 [Glycine max]

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/354 (73%), Positives = 286/354 (80%), Gaps = 19/354 (5%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFPQLVGGV 120
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE++VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 121 VPGQLGVSYPPQSTLGMMQPI--SAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 178
           +P  LG  YPP+ TL  M P+   AVPVPP  W VPPRPQPW+ Q  AVS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPPRPTLPTMPPMYNPAVPVPPNAWMVPPRPQPWFSQPPAVSVPP--AAPYT 178

Query: 179 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 237
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSST 235

Query: 238 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGG 297
           FSAP   +S+          SV +  SAN  V    H+ S    T SNSHSYASGPNTGG
Sbjct: 236 FSAPPLPSSVP---------SVTSVMSANVPVDT--HLSSNSSVTTSNSHSYASGPNTGG 284

Query: 298 PSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 351
           PSIGPPPVIANKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQ+S
Sbjct: 285 PSIGPPPVIANKAPATQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMS 338

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
TAIR|locus:2015776	367	SUF4 "suppressor of FRIGIDA4"	0.333	0.367	0.742	3.4e-94
UNIPROTKB|E2RI65	457	ZNF207 "Uncharacterized protei	0.212	0.188	0.678	1.4e-41
UNIPROTKB|F1RKW7	464	ZNF207 "Uncharacterized protei	0.212	0.185	0.678	7.5e-41
UNIPROTKB|F1MVH9	420	ZNF207 "Uncharacterized protei	0.212	0.204	0.678	7.5e-41
WB|WBGene00007105	341	B0035.1 [Caenorhabditis elegan	0.261	0.310	0.581	5.1e-40
UNIPROTKB|J3QRS9	493	ZNF207 "Zinc finger protein 20	0.348	0.286	0.465	2.2e-38
UNIPROTKB|F1PRK3	494	ZNF207 "Uncharacterized protei	0.348	0.285	0.465	2.2e-38
UNIPROTKB|O43670	478	ZNF207 "Zinc finger protein 20	0.348	0.294	0.465	2.2e-38
ZFIN|ZDB-GENE-030131-7377	436	znf207b "zinc finger protein 2	0.212	0.197	0.666	9.3e-38
UNIPROTKB|E1C275	465	E1C275 "Uncharacterized protei	0.212	0.184	0.678	2.4e-37

TAIR|locus:2015776 SUF4 "suppressor of FRIGIDA4" [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
 Identities = 101/136 (74%), Positives = 107/136 (78%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MGKKKKR + KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTA GM IHVLQVHK
Sbjct:     1 MGKKKKRATEKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTASGMVIHVLQVHK 60

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFXXXXXXX 120
             ENVTKVPNAK GR+STDIEIYGMQGIPP VL AHYGEEE+E P+K+AKV+          
Sbjct:    61 ENVTKVPNAKDGRDSTDIEIYGMQGIPPHVLTAHYGEEEDEPPAKVAKVEIP-SAPLGGV 119

Query:   121 XXXXXXXSYPPQSTLG 136
                     YPPQ   G
Sbjct:   120 VPRPYGMVYPPQQVPG 135

GO:0003677 "DNA binding" evidence=IEA;IDA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP;TAS

GO:0009910 "negative regulation of flower development" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

UNIPROTKB|E2RI65 ZNF207 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 347 (127.2 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1RKW7 ZNF207 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 347 (127.2 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008201 "heparin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MVH9 ZNF207 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 347 (127.2 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008201 "heparin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

WB|WBGene00007105 B0035.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 360 (131.8 bits), Expect = 5.1e-40, Sum P(3) = 5.1e-40
 Identities = 64/110 (58%), Positives = 84/110 (76%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+V  K WC+YC+REFDDEKIL+QHQKAKHFKCH+CHKKL +  G++IH +QVHK
Sbjct:     1 MGRKKKKVD-KPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVD 110
             E + K+P A  GR++  +EIYGMQGIP     A+ G  +EE   K +++D
Sbjct:    60 ETIDKIPAAVHGRDNIHVEIYGMQGIPS---GAYRGAADEEPDEKRSRMD 106

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J3QRS9 ZNF207 "Zinc finger protein 207" [Homo sapiens (taxid:9606)]

 Score = 350 (128.3 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
 Identities = 67/144 (46%), Positives = 88/144 (61%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG--EEEEEVPSKMAKVDTSFXXXXX 118
             E +  VPNA PGR   ++EIYGM+GIP   +       E++ +   K  + D S      
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDD 119

Query:   119 XXXXXXXXXSYPPQSTLGMMQPIS 142
                        P Q   G + P++
Sbjct:   120 DSAASTSFQPQPVQPQQGYIPPMA 143

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PRK3 ZNF207 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 350 (128.3 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
 Identities = 67/144 (46%), Positives = 88/144 (61%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG--EEEEEVPSKMAKVDTSFXXXXX 118
             E +  VPNA PGR   ++EIYGM+GIP   +       E++ +   K  + D S      
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDD 119

Query:   119 XXXXXXXXXSYPPQSTLGMMQPIS 142
                        P Q   G + P++
Sbjct:   120 DSAASTSFQPQPVQPQQGYIPPMA 143

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|O43670 ZNF207 "Zinc finger protein 207" [Homo sapiens (taxid:9606)]

 Score = 350 (128.3 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
 Identities = 67/144 (46%), Positives = 88/144 (61%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG--EEEEEVPSKMAKVDTSFXXXXX 118
             E +  VPNA PGR   ++EIYGM+GIP   +       E++ +   K  + D S      
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDD 119

Query:   119 XXXXXXXXXSYPPQSTLGMMQPIS 142
                        P Q   G + P++
Sbjct:   120 DSAASTSFQPQPVQPQQGYIPPMA 143

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0005730 "nucleolus" evidence=IDA

ZFIN|ZDB-GENE-030131-7377 znf207b "zinc finger protein 207, b" [Danio rerio (taxid:7955)]

 Score = 343 (125.8 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
 Identities = 58/87 (66%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             + +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 DTIDGVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E1C275 E1C275 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 347 (127.2 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	405
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	1e-05
PRK14950	585	PRK14950, PRK14950, DNA polymerase III subunits ga	1e-04
PHA03378	991	PHA03378, PHA03378, EBNA-3B; Provisional	6e-04
PHA03378	991	PHA03378, PHA03378, EBNA-3B; Provisional	7e-04
PRK14951	618	PRK14951, PRK14951, DNA polymerase III subunits ga	8e-04
pfam03153	332	pfam03153, TFIIA, Transcription factor IIA, alpha/	0.001
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.003
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	0.003
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	0.004
PRK14971	614	PRK14971, PRK14971, DNA polymerase III subunits ga	0.004

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 47.6 bits (113), Expect = 1e-05
 Identities = 40/198 (20%), Positives = 56/198 (28%), Gaps = 7/198 (3%)

Query: 126  GVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVS---IPPPAAVGYAQQPL 182
              S PPQ         +   +     P PP P P    HA VS   +PP  A      P 
Sbjct: 2675 QASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPA 2734

Query: 183  FPVQNVRPPLASST----SPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLF 238
             P     P + +       PA    P    G P+  PP   +      +     +  S  
Sbjct: 2735 LPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSES 2794

Query: 239  SAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGP 298
               +PS        A +     A   A +         S Q                 G 
Sbjct: 2795 RESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGG 2854

Query: 299  SIGPPPVIANKAPATQPA 316
            S+ P   +  + P+  PA
Sbjct: 2855 SVAPGGDVRRRPPSRSPA 2872

Length = 3151

>gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 1/75 (1%)

Query: 141 ISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPAL 200
           +  VP P    P    P P  P   A S  P AA      P  PV+    P      P  
Sbjct: 360 LVPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVA 418

Query: 201 QPSPVVPPGMPSSTP 215
            P P  P   P  T 
Sbjct: 419 PPVPHTPESAPKLTR 433

Length = 585

>gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional

 Score = 41.6 bits (97), Expect = 6e-04
 Identities = 34/97 (35%), Positives = 40/97 (41%), Gaps = 13/97 (13%)

Query: 130 PPQSTLGMMQPISAVPV---PPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 186
           PP +  G  Q  +A      PPA  P   RP    P  A    PP AA G A+ P     
Sbjct: 706 PPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRAR---PPAAAPGRARPPAAAPG 762

Query: 187 NVRPPLASSTSPALQPSPVVPP-------GMPSSTPP 216
             RPP A+  +P  QP P  PP       G P+  PP
Sbjct: 763 RARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPP 799

Length = 991

>gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional

 Score = 41.6 bits (97), Expect = 7e-04
 Identities = 32/106 (30%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 122 PGQLGVSYPPQSTLGMMQPISAVPV---PPAGWPVPPRPQPWYPQHAAVSIPPPAAV-GY 177
           P       P Q   G MQP    P    PPA  P   +     P  A     PPAA  G 
Sbjct: 678 PTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQR----PAAATGRARPPAAAPGR 733

Query: 178 AQQPLFPVQNVRPPLASST-------SPALQPSPVVPPGMPSSTPP 216
           A+ P       RPP A+         +P     P   PG P+  PP
Sbjct: 734 ARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPP 779

Length = 991

>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional

 Score = 41.2 bits (97), Expect = 8e-04
 Identities = 21/82 (25%), Positives = 27/82 (32%), Gaps = 2/82 (2%)

Query: 141 ISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPAL 200
            SA   PPA  P  P   P     A  + P  A    A  P  P Q     +A     A 
Sbjct: 411 ASAPAAPPAAAPPAPVAAP--AAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAP 468

Query: 201 QPSPVVPPGMPSSTPPVTVSQP 222
           +P+       P++ P      P
Sbjct: 469 EPAVASAAPAPAAAPAAARLTP 490

Length = 618

>gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 30/190 (15%), Positives = 42/190 (22%), Gaps = 19/190 (10%)

Query: 152 PVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPS-PVVPPGM 210
           P  P P    PQ      P  A            Q+  P  + + +P    + P  P G 
Sbjct: 53  PQAPPPVAQLPQPLPQPPPTQALQALPAGD--QQQHNTPTGSPAANPPATFALPAGPAGP 110

Query: 211 PSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVT 270
              T P  +     PV+     + S L           L        S    S   ++  
Sbjct: 111 TIQTEPGQLYPVQVPVMVTQNPANSPLDQPAQQRALQQLQQRYGAPASGQLPSQQQSAQK 170

Query: 271 N-SYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAM 329
           N    +     G             T G        +     A            E    
Sbjct: 171 NDESQLQQQPNGETPP-------QQTDGAGDDESEALVRLREADGTL--------EQRIK 215

Query: 330 SMEERRMSSV 339
             E      V
Sbjct: 216 GAEGGGAMKV 225

Transcription initiation factor IIA (TFIIA) is a heterotrimer, the three subunits being known as alpha, beta, and gamma, in order of molecular weight. The N and C-terminal domains of the gamma subunit are represented in pfam02268 and pfam02751, respectively. This family represents the precursor that yields both the alpha and beta subunits. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II. Together with TFIID, TFIIA binds to the promoter region; this is the first step in the formation of a pre-initiation complex (PIC). Binding of the rest of the transcription machinery follows this step. After initiation, the PIC does not completely dissociate from the promoter. Some components, including TFIIA, remain attached and re-initiate a subsequent round of transcription. Length = 332

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 39.9 bits (93), Expect = 0.003
 Identities = 44/222 (19%), Positives = 65/222 (29%), Gaps = 35/222 (15%)

Query: 114  PQLVGGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPP-- 171
            PQ      P          +    + P +  P PP   P P   +P       V  P   
Sbjct: 2593 PQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERP 2652

Query: 172  --PAAVGYAQQPLFPVQNVRPPLASSTS-----PALQPS---------PVVPPGMPSSTP 215
                A G   +P    +  R   ASS        A +P+         P  PP  P   P
Sbjct: 2653 RDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712

Query: 216  PVTVSQ-PLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYH 274
               VS  PL P       +  +L +AP P    A+ +     G     +   T+      
Sbjct: 2713 HALVSATPLPPGPAAARQASPALPAAPAPP---AVPAGPATPGGPARPARPPTTAGPPAP 2769

Query: 275  VPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPA 316
             P              + P  G P     P +A+ + + +  
Sbjct: 2770 AP-------------PAAPAAGPPRRLTRPAVASLSESRESL 2798

Length = 3151

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 39.8 bits (93), Expect = 0.003
 Identities = 24/122 (19%), Positives = 31/122 (25%), Gaps = 8/122 (6%)

Query: 113 FPQLVGGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPP 172
            P       P               +   S  P  P   P  P+  P          P  
Sbjct: 195 GPPEQPPGYPQPPQGHPEQVQPQQFLPAPSQAPAQPPLPPQLPQQPP---PLQQPQFPGL 251

Query: 173 AAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMP----SSTPPVTVSQPLFPVVN 228
           +       P  P Q  +PP   +  P     P   PG+P    +  PP    Q L  V  
Sbjct: 252 SQQMPPPPPQPPQQQQQPPQPQAQPPPQNQ-PTPHPGLPQGQNAPLPPPQQPQLLPLVQQ 310

Query: 229 NN 230
             
Sbjct: 311 PQ 312

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 39.4 bits (92), Expect = 0.004
 Identities = 40/179 (22%), Positives = 51/179 (28%), Gaps = 25/179 (13%)

Query: 113 FPQLVGGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPP 172
            PQ    V+P  +    PP+       P    P  P G+P PP+  P   Q       P 
Sbjct: 172 LPQPPQQVLPQGM----PPRQ---AAFPQQGPPEQPPGYPQPPQGHPEQVQPQQFLPAPS 224

Query: 173 AAVGYAQQPLFPVQ--NVRPPLASSTSPALQ----PSPVVPPGMPSSTPPVTVSQPLFPV 226
            A     QP  P Q     PPL     P L     P P  PP      PP   +QP  P 
Sbjct: 225 QA---PAQPPLPPQLPQQPPPLQQPQFPGLSQQMPPPPPQPPQQ-QQQPPQPQAQP--PP 278

Query: 227 VNNNTTSQSSLFSA------PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQ 279
            N  T               P     + L    + +            ++        Q
Sbjct: 279 QNQPTPHPGLPQGQNAPLPPPQQPQLLPLVQQPQGQQRGPQFREQLVQLSQQQREALSQ 337

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

>gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.0 bits (91), Expect = 0.004
 Identities = 16/92 (17%), Positives = 26/92 (28%)

Query: 130 PPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVR 189
             +     ++P+   P             P   Q +A + P             P  +V 
Sbjct: 371 GGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVD 430

Query: 190 PPLASSTSPALQPSPVVPPGMPSSTPPVTVSQ 221
           PP A   +P       V P        + VS+
Sbjct: 431 PPAAVPVNPPSTAPQAVRPAQFKEEKKIPVSK 462

Length = 614

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	405
KOG2893	341	consensus Zn finger protein [General function pred	99.96
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.58
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.49
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.25
KOG3576	267	consensus Ovo and related transcription factors [T	99.23
KOG3576	267	consensus Ovo and related transcription factors [T	99.1
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.95
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.91
PHA00733	128	hypothetical protein	98.75
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.68
PHA02768	55	hypothetical protein; Provisional	98.43
KOG3608	467	consensus Zn finger proteins [General function pre	98.42
PHA00733	128	hypothetical protein	98.41
PHA02768	55	hypothetical protein; Provisional	98.4
KOG3608	467	consensus Zn finger proteins [General function pre	98.33
KOG3993	500	consensus Transcription factor (contains Zn finger	98.25
PLN03086	567	PRLI-interacting factor K; Provisional	98.19
PHA00732	79	hypothetical protein	98.0
PHA00616	44	hypothetical protein	97.79
PHA00732	79	hypothetical protein	97.76
PLN03086	567	PRLI-interacting factor K; Provisional	97.52
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.52
KOG3993	500	consensus Transcription factor (contains Zn finger	97.42
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.33
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.32
KOG2893	341	consensus Zn finger protein [General function pred	97.31
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.27
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.23
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.22
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.06
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.0
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.71
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.68
PHA00616	44	hypothetical protein	96.52
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.28
smart00355	26	ZnF_C2H2 zinc finger.	95.97
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.86
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.59
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.46
KOG3671	569	consensus Actin regulatory protein (Wiskott-Aldric	95.36
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	95.21
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.49
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	94.46
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	94.46
smart00355	26	ZnF_C2H2 zinc finger.	94.45
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	94.4
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.36
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	94.31
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	94.17
KOG1146	1406	consensus Homeobox protein [General function predi	93.99
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.33
PRK04860	160	hypothetical protein; Provisional	93.12
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	92.93
COG5048	467	FOG: Zn-finger [General function prediction only]	92.54
COG5236	493	Uncharacterized conserved protein, contains RING Z	92.11
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.15
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	89.35
COG5236	493	Uncharacterized conserved protein, contains RING Z	88.94
COG5048	467	FOG: Zn-finger [General function prediction only]	88.83
KOG1146	1406	consensus Homeobox protein [General function predi	88.02
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	87.2
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.78
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	86.43
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	85.7
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	85.19
COG4888	104	Uncharacterized Zn ribbon-containing protein [Gene	84.55
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	84.32
KOG2932	389	consensus E3 ubiquitin ligase involved in ubiquiti	83.14
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	82.45
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	81.36
KOG2186	276	consensus Cell growth-regulating nucleolar protein	80.9
COG5188	470	PRP9 Splicing factor 3a, subunit 3 [RNA processing	80.38

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=99.96  E-value=2.4e-27  Score=222.31  Aligned_cols=110  Identities=56%  Similarity=1.064  Sum_probs=96.9

Q ss_pred             CCCCCCCCCCcccccccCcccCChhHHHHHhhcCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCcccccc
Q 015552            1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI   80 (405)
Q Consensus         1 mgkKkrr~geKp~C~~CgK~F~~ks~Lk~H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~i   80 (405)
                      |||||++ ..|+||.+|++.|.++..|.+|++.|+|||++|.|++.+--.|..|..++|+|...+++++..+|+..+.+|
T Consensus         1 mgrkkkk-~~kpwcwycnrefddekiliqhqkakhfkchichkkl~sgpglsihcmqvhketid~ip~av~gr~~i~vei   79 (341)
T KOG2893|consen    1 MGRKKKK-VDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKETIDKIPAAVHGRDNIHVEI   79 (341)
T ss_pred             CCccccc-cCCceeeecccccchhhhhhhhhhhccceeeeehhhhccCCCceeehhhhhhhhhhcccccccCCcceeEEE
Confidence            8999999 789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHhhhcCCCcccccccCCCCC
Q 015552           81 YGMQGIPPDVLAAHYGEEEEEVPSKMAKVDTSFP  114 (405)
Q Consensus        81 Cgk~F~~~s~L~~H~r~h~~e~~~k~ak~~~p~~  114 (405)
                      +|+..+.++..+.   ..+++.++|+.+++..+.
T Consensus        80 ygmqgip~~~~r~---~~de~~~ekr~~~d~~~~  110 (341)
T KOG2893|consen   80 YGMQGIPSGAYRG---AADEEPDEKRSRMDNGPP  110 (341)
T ss_pred             eeccCCCchhhhh---hhhcCchhhhhcccCCCC
Confidence            9999999876543   344455556666665443

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.58  E-value=1.6e-15  Score=145.89  Aligned_cols=89  Identities=19%  Similarity=0.276  Sum_probs=80.6

Q ss_pred             ccccCcccCChhHHHHHhh--cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHH
Q 015552           14 CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVL   91 (405)
Q Consensus        14 C~~CgK~F~~ks~Lk~H~R--EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L   91 (405)
                      |.+|||+|.....|+.|+|  .-+++|.+|||.|.+.-.|+.|+|+|+|||+            |.|..|+|.|.++++|
T Consensus       164 C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKP------------F~C~hC~kAFADRSNL  231 (279)
T KOG2462|consen  164 CKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTGEKP------------FSCPHCGKAFADRSNL  231 (279)
T ss_pred             CCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccccCCCC------------ccCCcccchhcchHHH
Confidence            9999999999999999999  6699999999999999999999999999987            8888999999999999


Q ss_pred             HHHHhhhcCCCcccccccCCCCC
Q 015552           92 AAHYGEEEEEVPSKMAKVDTSFP  114 (405)
Q Consensus        92 ~~H~r~h~~e~~~k~ak~~~p~~  114 (405)
                      +.|+++|.+.+.+++.+......
T Consensus       232 RAHmQTHS~~K~~qC~~C~KsFs  254 (279)
T KOG2462|consen  232 RAHMQTHSDVKKHQCPRCGKSFA  254 (279)
T ss_pred             HHHHHhhcCCccccCcchhhHHH
Confidence            99999999998888777754433

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.49  E-value=1e-14  Score=140.40  Aligned_cols=76  Identities=18%  Similarity=0.291  Sum_probs=70.0

Q ss_pred             cccccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCC
Q 015552           11 KVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (405)
Q Consensus        11 Kp~C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~   86 (405)
                      ...|.+|||+|++...|+.|+|    ||||.|..|+|+|..++||+.|+++|.+.|.            |+|..|+|.|.
T Consensus       187 ~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~------------~qC~~C~KsFs  254 (279)
T KOG2462|consen  187 PCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK------------HQCPRCGKSFA  254 (279)
T ss_pred             CcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcc------------ccCcchhhHHH
Confidence            3449999999999999999999    9999999999999999999999999988775            99999999999


Q ss_pred             ChHHHHHHHhhh
Q 015552           87 PPDVLAAHYGEE   98 (405)
Q Consensus        87 ~~s~L~~H~r~h   98 (405)
                      ..+.|.+|...-
T Consensus       255 l~SyLnKH~ES~  266 (279)
T KOG2462|consen  255 LKSYLNKHSESA  266 (279)
T ss_pred             HHHHHHHhhhhc
Confidence            999999997543

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.25  E-value=1.3e-12  Score=138.25  Aligned_cols=74  Identities=16%  Similarity=0.345  Sum_probs=70.2

Q ss_pred             ccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCC
Q 015552           11 KVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQG   85 (405)
Q Consensus        11 Kp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F   85 (405)
                      -.| |+.|+|+|...+.|.+|.-    .|||+|.+|.|.|..+.+|..|.|.|.|||+            |+|+.|+|+|
T Consensus       893 gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKP------------fQCdKClKRF  960 (1007)
T KOG3623|consen  893 GMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKP------------FQCDKCLKRF  960 (1007)
T ss_pred             ccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCc------------chhhhhhhhc
Confidence            345 9999999999999999988    8999999999999999999999999999997            9999999999


Q ss_pred             CChHHHHHHHh
Q 015552           86 IPPDVLAAHYG   96 (405)
Q Consensus        86 ~~~s~L~~H~r   96 (405)
                      .+.....+||.
T Consensus       961 SHSGSYSQHMN  971 (1007)
T KOG3623|consen  961 SHSGSYSQHMN  971 (1007)
T ss_pred             ccccchHhhhc
Confidence            99999999985

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.23  E-value=1.9e-12  Score=119.99  Aligned_cols=80  Identities=16%  Similarity=0.245  Sum_probs=67.8

Q ss_pred             CCcccccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCC
Q 015552            9 SSKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (405)
Q Consensus         9 geKp~C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~   84 (405)
                      ...+.|.+|+|.|.....|.+|++    .|.|.|..|||.|...-.|+||+|+|++.++            |+|..|+|.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrp------------ykc~~c~ka  182 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRP------------YKCSLCEKA  182 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccc------------cchhhhhHH
Confidence            345569999999999999999999    7889999999999999999999999998887            777888888


Q ss_pred             CCChHHHHHHHhhhcC
Q 015552           85 GIPPDVLAAHYGEEEE  100 (405)
Q Consensus        85 F~~~s~L~~H~r~h~~  100 (405)
                      |.++..|+.|.+.-++
T Consensus       183 ftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  183 FTQRCSLESHLKKVHG  198 (267)
T ss_pred             HHhhccHHHHHHHHcC
Confidence            8888888888776554

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.10  E-value=2e-11  Score=113.33  Aligned_cols=88  Identities=22%  Similarity=0.385  Sum_probs=74.6

Q ss_pred             CcccccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccc---cccCCCCCCCCccccccCC
Q 015552           10 SKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV---TKVPNAKPGRESTDIEIYG   82 (405)
Q Consensus        10 eKp~C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp---~~cp~~kpgRk~~~C~iCg   82 (405)
                      .|+.|..|||.|.+-.+|++|+|    .|||+|..|+|.|+++..|..|++.+|+...   |+..    ..+-|-|+.||
T Consensus       144 kr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yayker----r~kl~vcedcg  219 (267)
T KOG3576|consen  144 KRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKER----RAKLYVCEDCG  219 (267)
T ss_pred             HHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHh----hhheeeecccC
Confidence            34559999999999999999999    8999999999999999999999999998642   2221    22349999999


Q ss_pred             CCCCChHHHHHHHhhhcCC
Q 015552           83 MQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        83 k~F~~~s~L~~H~r~h~~e  101 (405)
                      ..-...+.+..|++.|+..
T Consensus       220 ~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  220 YTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             CCCCChhHHHHHHHhcCCC
Confidence            9999999999999988754

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.95  E-value=2.3e-10  Score=121.61  Aligned_cols=74  Identities=18%  Similarity=0.269  Sum_probs=55.4

Q ss_pred             ccccccCcccCChhHHHHHhh-----------------cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCC
Q 015552           12 VWCYYCDREFDDEKILVQHQK-----------------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRE   74 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R-----------------EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk   74 (405)
                      +.|-.|..+|.++..|.+|+.                 -|.|||..|||.|..+.+|+.|+|+|.|||+           
T Consensus       241 fsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKP-----------  309 (1007)
T KOG3623|consen  241 FSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKP-----------  309 (1007)
T ss_pred             CcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCC-----------
Confidence            337778888888877777776                 4668888888888888888888888877776           


Q ss_pred             ccccccCCCCCCChHHHHHHHhh
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGE   97 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~   97 (405)
                       |+|..|+|+|.+...+..|+..
T Consensus       310 -feCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  310 -FECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             -cCCcccccccccCCcccccccc
Confidence             6666677777777777777643

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.91  E-value=4.1e-10  Score=121.45  Aligned_cols=85  Identities=25%  Similarity=0.378  Sum_probs=74.0

Q ss_pred             ccccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccc---cCCCC
Q 015552           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE---IYGMQ   84 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~---iCgk~   84 (405)
                      -.|-+|.|..+.++.|+.|+|    ||||||++||+.|+++.||+.|+ .+|+-++       +.|-.+.|.   +|.+.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p-------~~R~q~ScP~~~ic~~k  677 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKP-------PARVQFSCPSTFICQKK  677 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcc-cccccCc-------cccccccCCchhhhccc
Confidence            349999999999999999999    99999999999999999999998 5666553       345558898   99999


Q ss_pred             CCChHHHHHHHhhhcCCCcc
Q 015552           85 GIPPDVLAAHYGEEEEEVPS  104 (405)
Q Consensus        85 F~~~s~L~~H~r~h~~e~~~  104 (405)
                      |...-.|.+|+++|.+....
T Consensus       678 ftn~V~lpQhIriH~~~~~s  697 (958)
T KOG1074|consen  678 FTNAVTLPQHIRIHLGGQIS  697 (958)
T ss_pred             ccccccccceEEeecCCCCC
Confidence            99999999999999865433

>PHA00733 hypothetical protein

Probab=98.75  E-value=8.3e-09  Score=90.57  Aligned_cols=76  Identities=11%  Similarity=0.143  Sum_probs=64.1

Q ss_pred             ccccccCcccCChhHHHHH------hh---cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCC
Q 015552           12 VWCYYCDREFDDEKILVQH------QK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H------~R---EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCg   82 (405)
                      ..|.+|++.|.....|..|      ..   +++|+|..|++.|.+..+|.+|++.+ . ..            +.|.+|+
T Consensus        41 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~-~~------------~~C~~Cg  106 (128)
T PHA00733         41 LIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-E-HS------------KVCPVCG  106 (128)
T ss_pred             HHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-C-cC------------ccCCCCC
Confidence            3499999999988777766      22   78999999999999999999998654 2 22            8899999


Q ss_pred             CCCCChHHHHHHHhhhcCC
Q 015552           83 MQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        83 k~F~~~s~L~~H~r~h~~e  101 (405)
                      +.|...+.|.+|++..++.
T Consensus       107 K~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        107 KEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CccCCHHHHHHHHHHhcCc
Confidence            9999999999999887753

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.68  E-value=6.6e-09  Score=112.29  Aligned_cols=54  Identities=26%  Similarity=0.620  Sum_probs=48.7

Q ss_pred             CCcccccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552            9 SSKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus         9 geKp~C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      ..|+.|.+|.|.|...+.|+.|.|    ||||+|++||.+|+++.+|+.|..+|+.+.
T Consensus       351 ~~khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~  408 (958)
T KOG1074|consen  351 FFKHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKY  408 (958)
T ss_pred             cccchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccC
Confidence            446679999999999999999999    999999999999999999999986666554

>PHA02768 hypothetical protein; Provisional

Probab=98.43  E-value=7.4e-08  Score=72.31  Aligned_cols=42  Identities=10%  Similarity=0.226  Sum_probs=26.3

Q ss_pred             ccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHH
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVL   91 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L   91 (405)
                      |+|..|||.|++.++|.+|+|+|+  ++            ++|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~------------~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TN------------LKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--Cc------------ccCCcccceeccccee
Confidence            566666666666666666666655  22            5566666666655544

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.42  E-value=1.3e-07  Score=94.34  Aligned_cols=89  Identities=21%  Similarity=0.361  Sum_probs=61.0

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh------cCcccccccccCCCChhhHHHHhhhhccccccccCCCC-----------
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK-----------   70 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R------EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~k-----------   70 (405)
                      +||.. |..||+.|.++..|-.|.|      ..+|.|..|.|+|.++..|+.|+++|-.  .++|+.|.           
T Consensus       204 ~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~  281 (467)
T KOG3608|consen  204 NEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLTT  281 (467)
T ss_pred             CCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChHHHHH
Confidence            56666 7777777777777777777      4567777777777777777777655432  34555431           


Q ss_pred             ------CCCCccccccCCCCCCChHHHHHHHhhhc
Q 015552           71 ------PGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        71 ------pgRk~~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                            -..+.|+|+.|++.|.+.++|.+|...|.
T Consensus       282 H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  282 HIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence                  12345888888888888888888777665

>PHA00733 hypothetical protein

Probab=98.41  E-value=2.3e-07  Score=81.53  Aligned_cols=52  Identities=25%  Similarity=0.441  Sum_probs=48.3

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh--cCcccccccccCCCChhhHHHHhhhhcc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R--EKPfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      +++++ |..|++.|.....|++|++  +++|+|.+|++.|.....|.+|++..|+
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            46677 9999999999999999999  8899999999999999999999988775

>PHA02768 hypothetical protein; Provisional

Probab=98.40  E-value=1.2e-07  Score=71.16  Aligned_cols=40  Identities=18%  Similarity=0.379  Sum_probs=37.4

Q ss_pred             cccccCcccCChhHHHHHhh--cCcccccccccCCCChhhHH
Q 015552           13 WCYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMA   52 (405)
Q Consensus        13 ~C~~CgK~F~~ks~Lk~H~R--EKPfkC~~CgKsFs~~s~L~   52 (405)
                      .|.+|||.|.+.++|.+|+|  .|+|+|..|+|.|.+.+.|.
T Consensus         7 ~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          7 ECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             CcchhCCeeccHHHHHHHHHhcCCcccCCcccceecccceeE
Confidence            49999999999999999999  78999999999999988775

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.33  E-value=3.4e-07  Score=91.33  Aligned_cols=88  Identities=22%  Similarity=0.300  Sum_probs=71.1

Q ss_pred             ccccccCcccCChhHHHHHhh-----cCcccccccccCCCChhhHHHHhhhhccccccccCC--CC--------------
Q 015552           12 VWCYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--AK--------------   70 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R-----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~--~k--------------   70 (405)
                      +.|..|+.+....+.|.+|+|     +|+|||..|++.|.+.+.|.+|.. +|.+..+.|..  |.              
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS~~~y~C~h~~C~~s~r~~~q~~~H~~  342 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHSKTVYQCEHPDCHYSVRTYTQMRRHFL  342 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH-hccccceecCCCCCcHHHHHHHHHHHHHH
Confidence            348888888888888888888     899999999999999999999985 66677788865  31              


Q ss_pred             ---C--CCCccccccCCCCCCChHHHHHHHhhhcC
Q 015552           71 ---P--GRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        71 ---p--gRk~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                         +  ..-.|.|+.|++.|..-..|.+|+...++
T Consensus       343 evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  343 EVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             HhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence               1  22349999999999999999999876654

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.25  E-value=3.9e-07  Score=92.68  Aligned_cols=93  Identities=22%  Similarity=0.353  Sum_probs=71.9

Q ss_pred             ccccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccccccc----CCC--------------
Q 015552           12 VWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV----PNA--------------   69 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c----p~~--------------   69 (405)
                      +.|+.|...|.+...|.+|..    .-.|+|..|+|.|+--.||..| |+.|+-++.--    +-.              
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASH-RRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASH-RRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhh-hcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            349999999999999999988    5679999999999999999999 56776543111    000              


Q ss_pred             CCCC----CccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           70 KPGR----ESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        70 kpgR----k~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +-|.    .-|.|++|+|.|.+...|+.|..+|+.....+
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccch
Confidence            0111    12899999999999999999999987644333

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.19  E-value=2.5e-06  Score=91.11  Aligned_cols=83  Identities=14%  Similarity=0.189  Sum_probs=59.4

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh--cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCC
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R--EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~   84 (405)
                      ..++++ |.+|++.|. ...|+.|++  .+++.|. |++.+ .+..|..|+++|..+++            +.|..|++.
T Consensus       449 el~~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kp------------i~C~fC~~~  513 (567)
T PLN03086        449 EAKNHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRL------------ITCRFCGDM  513 (567)
T ss_pred             ccccCccCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCc------------eeCCCCCCc
Confidence            346677 999999996 677999999  7899999 99765 66899999877776666            666667766


Q ss_pred             CCC----------hHHHHHHHhhhcCCCcccc
Q 015552           85 GIP----------PDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        85 F~~----------~s~L~~H~r~h~~e~~~k~  106 (405)
                      |..          ...|..|+... +.+...+
T Consensus       514 v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C  544 (567)
T PLN03086        514 VQAGGSAMDVRDRLRGMSEHESIC-GSRTAPC  544 (567)
T ss_pred             cccCccccchhhhhhhHHHHHHhc-CCcceEc
Confidence            631          23566666553 4444433

>PHA00732 hypothetical protein

Probab=98.00  E-value=3.3e-06  Score=68.21  Aligned_cols=33  Identities=30%  Similarity=0.460  Sum_probs=15.4

Q ss_pred             ccccCcccCChhHHHHHhh--cCcccccccccCCC
Q 015552           14 CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLS   46 (405)
Q Consensus        14 C~~CgK~F~~ks~Lk~H~R--EKPfkC~~CgKsFs   46 (405)
                      |..|++.|.+...|++|++  ...+.|..|+++|.
T Consensus         4 C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~   38 (79)
T PHA00732          4 CPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR   38 (79)
T ss_pred             CCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeC
Confidence            4444444444444444443  23344444444444

>PHA00616 hypothetical protein

Probab=97.79  E-value=7.1e-06  Score=58.96  Aligned_cols=32  Identities=25%  Similarity=0.485  Sum_probs=28.7

Q ss_pred             cccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      +|+|..||+.|..+++|.+|+++||+++++.|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            68999999999999999999999999987544

>PHA00732 hypothetical protein

Probab=97.76  E-value=1.6e-05  Score=64.22  Aligned_cols=49  Identities=20%  Similarity=0.259  Sum_probs=41.5

Q ss_pred             cccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcC
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      +|+|..|++.|.+.++|++|++.+|..              +.|++|++.|.   .|.+|.+++.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~--------------~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL--------------TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC--------------CccCCCCCEeC---ChhhhhcccCC
Confidence            589999999999999999998755542              56999999999   47889888765

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.52  E-value=9e-05  Score=79.36  Aligned_cols=73  Identities=18%  Similarity=0.323  Sum_probs=55.7

Q ss_pred             ccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCC----------hhhHHHHhhhhccccccccCCCCCCCCc
Q 015552           11 KVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLST----------AGGMAIHVLQVHKENVTKVPNAKPGRES   75 (405)
Q Consensus        11 Kp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~----------~s~L~rH~r~hH~ekp~~cp~~kpgRk~   75 (405)
                      +.+ |. ||+.| .+..|..|++    +|++.|..|++.|..          ...|..|++. .+.+.            
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~-CG~rt------------  541 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI-CGSRT------------  541 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh-cCCcc------------
Confidence            344 99 99866 5689999987    899999999999952          3578889754 34443            


Q ss_pred             cccccCCCCCCChHHHHHHHhhhc
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      +.|..||+.+..++ +..|+..-+
T Consensus       542 ~~C~~Cgk~Vrlrd-m~~H~~~~h  564 (567)
T PLN03086        542 APCDSCGRSVMLKE-MDIHQIAVH  564 (567)
T ss_pred             eEccccCCeeeehh-HHHHHHHhh
Confidence            89999999887765 567765543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.52  E-value=2.4e-05  Score=77.37  Aligned_cols=64  Identities=25%  Similarity=0.351  Sum_probs=46.3

Q ss_pred             cCcccccc--cccCCCChhhHHHHhhhhcc-----ccccccCC--CCCCCCccccccCCCCCCChHHHHHHHh
Q 015552           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHK-----ENVTKVPN--AKPGRESTDIEIYGMQGIPPDVLAAHYG   96 (405)
Q Consensus        33 EKPfkC~~--CgKsFs~~s~L~rH~r~hH~-----ekp~~cp~--~kpgRk~~~C~iCgk~F~~~s~L~~H~r   96 (405)
                      +|+|+|.+  |+|++...-.|+-|++--|.     +.+...+.  -.-..|.|+|++|+|++.....|+-|++
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            79999998  99999999999999643341     11111111  0123455999999999999999998865

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.42  E-value=4.8e-05  Score=77.74  Aligned_cols=52  Identities=27%  Similarity=0.538  Sum_probs=44.9

Q ss_pred             cccccccCcccCChhHHHHHhh----------------cC---------------------cccccccccCCCChhhHHH
Q 015552           11 KVWCYYCDREFDDEKILVQHQK----------------AK---------------------HFKCHVCHKKLSTAGGMAI   53 (405)
Q Consensus        11 Kp~C~~CgK~F~~ks~Lk~H~R----------------EK---------------------PfkC~~CgKsFs~~s~L~r   53 (405)
                      .|.|.+|+|.|+.-.+|..|+|                ++                     -|.|.+|+|+|.+...|+.
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrK  374 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRK  374 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHH
Confidence            3459999999999999999999                11                     2889999999999999999


Q ss_pred             Hhhhhcccc
Q 015552           54 HVLQVHKEN   62 (405)
Q Consensus        54 H~r~hH~ek   62 (405)
                      |+.+||...
T Consensus       375 Hqlthq~~~  383 (500)
T KOG3993|consen  375 HQLTHQRAP  383 (500)
T ss_pred             hHHhhhccc
Confidence            998887543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.33  E-value=9.6e-05  Score=60.10  Aligned_cols=72  Identities=24%  Similarity=0.229  Sum_probs=20.9

Q ss_pred             ccccCcccCChhHHHHHhhcCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHH
Q 015552           14 CYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAA   93 (405)
Q Consensus        14 C~~CgK~F~~ks~Lk~H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~   93 (405)
                      |.+|+..|.....|..|+++..-......+.+.....+..+.+....             ..+.|.+|++.|.....|..
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~C~~C~~~f~s~~~l~~   68 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVK-------------ESFRCPYCNKTFRSREALQE   68 (100)
T ss_dssp             ------------------------------------------------------------SSEEBSSSS-EESSHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccC-------------CCCCCCccCCCCcCHHHHHH
Confidence            66666666666666666652221111122222333333333322111             13889999999999999999


Q ss_pred             HHhhh
Q 015552           94 HYGEE   98 (405)
Q Consensus        94 H~r~h   98 (405)
                      |++.+
T Consensus        69 Hm~~~   73 (100)
T PF12756_consen   69 HMRSK   73 (100)
T ss_dssp             HHHHT
T ss_pred             HHcCc
Confidence            99875

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.32  E-value=0.00022  Score=53.16  Aligned_cols=44  Identities=27%  Similarity=0.625  Sum_probs=23.3

Q ss_pred             cccccCcccCChhHHHHHhh------cCcccccccccCCCChhhHHHHhhhhc
Q 015552           13 WCYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        13 ~C~~CgK~F~~ks~Lk~H~R------EKPfkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      .|.+|++. .+...|..|..      .+.+.|.+|.+.+.  .+|.+|++.+|
T Consensus         4 ~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    4 TCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            36666663 33445665555      24455666665433  25666655544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=97.31  E-value=0.002  Score=61.89  Aligned_cols=54  Identities=33%  Similarity=0.447  Sum_probs=40.8

Q ss_pred             CCCCCCCCCCCCCCCcccCCCCCCCCCCceEEEEEcccccChHHHhhccCceee
Q 015552          290 ASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQV  343 (405)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (405)
                      ++...|+.++.+.+.++...-+++--++.-.-|+-+||.+|.||||+.|+|||-
T Consensus       283 ~sttsttnsta~kpaasitskpatltttsatklihpdedisleerraqlpkyqr  336 (341)
T KOG2893|consen  283 ESTTSTTNSTAGKPAASITSKPATLTTTSATKLIHPDEDISLEERRAQLPKYQR  336 (341)
T ss_pred             cccccCcccccccchhhhhcccceeccccceeeeCCcccccHHHHhhhhhhhhh
Confidence            344445555566666655555777766777799999999999999999999984

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.27  E-value=0.00011  Score=46.90  Aligned_cols=13  Identities=15%  Similarity=0.115  Sum_probs=7.1

Q ss_pred             HHHHhhhhccccc
Q 015552           51 MAIHVLQVHKENV   63 (405)
Q Consensus        51 L~rH~r~hH~ekp   63 (405)
                      |.+|++.|+++++
T Consensus         2 l~~H~~~H~~~k~   14 (26)
T PF13465_consen    2 LRRHMRTHTGEKP   14 (26)
T ss_dssp             HHHHHHHHSSSSS
T ss_pred             HHHHhhhcCCCCC
Confidence            5555555555544

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.23  E-value=0.00011  Score=46.94  Aligned_cols=22  Identities=36%  Similarity=0.700  Sum_probs=18.4

Q ss_pred             HHHHHhh----cCcccccccccCCCC
Q 015552           26 ILVQHQK----AKHFKCHVCHKKLST   47 (405)
Q Consensus        26 ~Lk~H~R----EKPfkC~~CgKsFs~   47 (405)
                      +|++|++    ||+|+|.+|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            3666776    999999999999974

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.22  E-value=0.00012  Score=44.72  Aligned_cols=22  Identities=27%  Similarity=0.730  Sum_probs=16.9

Q ss_pred             ccccccccCCCChhhHHHHhhh
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~   57 (405)
                      |+|.+|++.|.++..|.+|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5777888888888888888765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.06  E-value=0.00025  Score=42.99  Aligned_cols=24  Identities=25%  Similarity=0.661  Sum_probs=17.1

Q ss_pred             ccccccccCCCChhhHHHHhhhhc
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      |+|.+|++.|.+...|.+|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            578888888888888888877665

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.00  E-value=0.00089  Score=49.93  Aligned_cols=53  Identities=19%  Similarity=0.327  Sum_probs=41.0

Q ss_pred             cccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcC
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      -|.|.+|++. .+...|..|....|...          ++.+.|.+|...+.  ++|.+|++.+++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~----------~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSE----------SKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCC----------CCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            4899999994 55678999988888654          22488999998654  489999987653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.71  E-value=0.00066  Score=43.09  Aligned_cols=25  Identities=24%  Similarity=0.460  Sum_probs=19.7

Q ss_pred             cccccccccCCCChhhHHHHhhhhc
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      +|+|..|++.|.....|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4788888888888888888876665

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.68  E-value=0.00051  Score=68.24  Aligned_cols=47  Identities=26%  Similarity=0.677  Sum_probs=42.6

Q ss_pred             CCccc-ccc--cCcccCChhHHHHHhh-----------------------cCcccccccccCCCChhhHHHHh
Q 015552            9 SSKVW-CYY--CDREFDDEKILVQHQK-----------------------AKHFKCHVCHKKLSTAGGMAIHV   55 (405)
Q Consensus         9 geKp~-C~~--CgK~F~~ks~Lk~H~R-----------------------EKPfkC~~CgKsFs~~s~L~rH~   55 (405)
                      ++|+| |.+  |+|+++....|+-|+.                       .|||+|.+|+|++...-.|+-|.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            46888 987  9999999999999887                       59999999999999999999884

>PHA00616 hypothetical protein

Probab=96.52  E-value=0.0012  Score=47.61  Aligned_cols=30  Identities=7%  Similarity=-0.190  Sum_probs=27.4

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      |+|..||+.|+...+|.+|++.|+++++..
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccc
Confidence            889999999999999999999999986553

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.28  E-value=0.0017  Score=39.59  Aligned_cols=23  Identities=17%  Similarity=0.083  Sum_probs=21.2

Q ss_pred             cccccCCCCCCChHHHHHHHhhh
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEE   98 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h   98 (405)
                      |.|.+|++.|.....|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>smart00355 ZnF_C2H2 zinc finger

Probab=95.97  E-value=0.0049  Score=37.52  Aligned_cols=22  Identities=18%  Similarity=0.563  Sum_probs=16.6

Q ss_pred             ccccccccCCCChhhHHHHhhh
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~   57 (405)
                      |+|..|++.|.....|.+|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            5677788888888888888753

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.86  E-value=0.0034  Score=46.55  Aligned_cols=31  Identities=13%  Similarity=0.288  Sum_probs=23.5

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      ++|..|.+|+..+.+..+|+||+..+|+.|+
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            8999999999999999999999999998774

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.59  E-value=0.0066  Score=36.56  Aligned_cols=24  Identities=17%  Similarity=0.079  Sum_probs=20.0

Q ss_pred             cccccCCCCCCChHHHHHHHhhhc
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      |.|.+|++.|.....|++|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            579999999999999999998874

...

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.46  E-value=0.0049  Score=39.36  Aligned_cols=21  Identities=43%  Similarity=0.803  Sum_probs=11.5

Q ss_pred             ccccccCcccCChhHHHHHhh
Q 015552           12 VWCYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R   32 (405)
                      ++|..|++.|.....|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            345555555555555555554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton]

Probab=95.36  E-value=1.3  Score=47.00  Aligned_cols=18  Identities=22%  Similarity=0.257  Sum_probs=13.8

Q ss_pred             hHHHhhccCceeeecccc
Q 015552          331 MEERRMSSVKYQVHDETS  348 (405)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~  348 (405)
                      |++|||+|=+..-.||-+
T Consensus       541 m~ara~a~~i~~tkd~de  558 (569)
T KOG3671|consen  541 MDARASALAIHSTKDEDE  558 (569)
T ss_pred             HHHHHHhhcccccccccc
Confidence            899999999888544433

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=95.21  E-value=0.27  Score=54.45  Aligned_cols=12  Identities=17%  Similarity=0.271  Sum_probs=6.5

Q ss_pred             CCCCCCCCCCCC
Q 015552          240 APIPSTSIALSS  251 (405)
Q Consensus       240 ~~~~p~~~p~~~  251 (405)
                      ++..|=++..--
T Consensus       607 aPvlP~gLkpKK  618 (1102)
T KOG1924|consen  607 APVLPFGLKPKK  618 (1102)
T ss_pred             cccCCCCCCccc
Confidence            355566665544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.49  E-value=0.018  Score=35.50  Aligned_cols=24  Identities=25%  Similarity=0.527  Sum_probs=17.6

Q ss_pred             ccccccccCCCChhhHHHHhhhhcc
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      |+|..|+.... +..|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            67888887777 7888888887764

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=94.46  E-value=0.016  Score=36.65  Aligned_cols=25  Identities=12%  Similarity=0.001  Sum_probs=23.0

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      |+|.+|++.|.....|.+|++.|..
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhcC
Confidence            7899999999999999999988864

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=94.46  E-value=0.036  Score=60.61  Aligned_cols=22  Identities=23%  Similarity=0.558  Sum_probs=11.6

Q ss_pred             ccccccCCCChhhHHHHhhhhc
Q 015552           38 CHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        38 C~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      |..|...|.....|.+|++.+|
T Consensus       185 C~~C~~~fld~~el~rH~~~~h  206 (669)
T KOG2231|consen  185 CKFCHERFLDDDELYRHLRFDH  206 (669)
T ss_pred             chhhhhhhccHHHHHHhhccce
Confidence            4555555555555555554444

>smart00355 ZnF_C2H2 zinc finger

Probab=94.45  E-value=0.037  Score=33.45  Aligned_cols=24  Identities=13%  Similarity=-0.011  Sum_probs=21.6

Q ss_pred             cccccCCCCCCChHHHHHHHhhhc
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998764

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=94.40  E-value=0.36  Score=53.51  Aligned_cols=10  Identities=10%  Similarity=0.218  Sum_probs=4.7

Q ss_pred             CCCCCCCCCC
Q 015552          243 PSTSIALSSS  252 (405)
Q Consensus       243 ~p~~~p~~~p  252 (405)
                      |+++....+|
T Consensus       599 P~~gm~pmaP  608 (1102)
T KOG1924|consen  599 PPPGMFPMAP  608 (1102)
T ss_pred             CCCCcccccc
Confidence            3444444554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.36  E-value=0.019  Score=35.61  Aligned_cols=21  Identities=29%  Similarity=0.767  Sum_probs=12.9

Q ss_pred             ccccccccCCCChhhHHHHhh
Q 015552           36 FKCHVCHKKLSTAGGMAIHVL   56 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r   56 (405)
                      |.|.+|++.|.....|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            456666666666666666654

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=94.31  E-value=0.036  Score=60.58  Aligned_cols=69  Identities=20%  Similarity=0.299  Sum_probs=53.2

Q ss_pred             ccccccCcccCChhHHHHHhhcCcccccccc------cCCCChhhHHHHhhhhccccccccCCCCCCCCccccc--cC-C
Q 015552           12 VWCYYCDREFDDEKILVQHQKAKHFKCHVCH------KKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IY-G   82 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~REKPfkC~~Cg------KsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~--iC-g   82 (405)
                      +.|.+|...|.....|.+|++...|.|..|.      .-|..-+.|..|.|..|                |.|+  .| .
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~H----------------flCE~~~C~~  246 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----------------FLCEEEFCRT  246 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhcC----------------cccccccccc
Confidence            4599999999999999999998888999985      34677789999998887                5555  55 3


Q ss_pred             CCCCChHHHHHHHh
Q 015552           83 MQGIPPDVLAAHYG   96 (405)
Q Consensus        83 k~F~~~s~L~~H~r   96 (405)
                      +.|.....++.|++
T Consensus       247 ~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  247 KKFYVAFELEIELK  260 (669)
T ss_pred             ceeeehhHHHHHHH
Confidence            45655555555555

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=94.17  E-value=0.026  Score=56.85  Aligned_cols=89  Identities=19%  Similarity=0.376  Sum_probs=59.7

Q ss_pred             CcccccccCcccCChhHHHHHhh-cCc-----------------------------------------------------
Q 015552           10 SKVWCYYCDREFDDEKILVQHQK-AKH-----------------------------------------------------   35 (405)
Q Consensus        10 eKp~C~~CgK~F~~ks~Lk~H~R-EKP-----------------------------------------------------   35 (405)
                      ++..|-+|.|.|..+..|+.||| .++                                                     
T Consensus       194 ~r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed  273 (423)
T KOG2482|consen  194 ERLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNED  273 (423)
T ss_pred             hhheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcC
Confidence            45569999999999999999999 000                                                     


Q ss_pred             ------ccccccccCCCChhhHHHHhhhhccccccccCCC---------------CCCCCccccccCCCCCCChHHHHHH
Q 015552           36 ------FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNA---------------KPGRESTDIEIYGMQGIPPDVLAAH   94 (405)
Q Consensus        36 ------fkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~---------------kpgRk~~~C~iCgk~F~~~s~L~~H   94 (405)
                            -+|..|.+..-....|..||+.+|.-.-.+.-..               ....+-..|-.|...|.....|..|
T Consensus       274 ~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~h  353 (423)
T KOG2482|consen  274 DAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIH  353 (423)
T ss_pred             CCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhh
Confidence                  1688888777777888888887775321111000               0111225577788888888888888


Q ss_pred             Hhhh
Q 015552           95 YGEE   98 (405)
Q Consensus        95 ~r~h   98 (405)
                      +..+
T Consensus       354 m~e~  357 (423)
T KOG2482|consen  354 MVED  357 (423)
T ss_pred             cccc
Confidence            7543

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=93.99  E-value=0.024  Score=65.47  Aligned_cols=84  Identities=14%  Similarity=0.163  Sum_probs=63.8

Q ss_pred             ccccCcccCChhHHHHHhh-----cCcccccccccCCCChhhHHHHhhhhccccc-cccC-------CC-----CCCCCc
Q 015552           14 CYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV-TKVP-------NA-----KPGRES   75 (405)
Q Consensus        14 C~~CgK~F~~ks~Lk~H~R-----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp-~~cp-------~~-----kpgRk~   75 (405)
                      |..|+..|.++..+-.|+.     .|-|+|.+|+-.|.....|..|+|..|-+-. .-|.       .+     .-+++.
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            5567777777777777666     7899999999999999999999999765422 1111       10     113355


Q ss_pred             cccccCCCCCCChHHHHHHHhh
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGE   97 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~   97 (405)
                      |.|..|.-.+.....|.+|++.
T Consensus       519 ~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHH
Confidence            9999999999999999999875

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.33  E-value=0.038  Score=35.16  Aligned_cols=22  Identities=27%  Similarity=0.625  Sum_probs=18.2

Q ss_pred             ccccccccCCCChhhHHHHhhh
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~   57 (405)
                      |.|..|++.|.....|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888754

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=93.12  E-value=0.035  Score=50.76  Aligned_cols=40  Identities=18%  Similarity=0.209  Sum_probs=32.0

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChH
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPD   89 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s   89 (405)
                      -+|+|. |++   ....+.+|.++|.+++.            |.|..|+..|...+
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~------------YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAV------------YRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCcc------------EECCCCCceeEEec
Confidence            469998 987   77788999988888775            88888988876543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=92.93  E-value=0.062  Score=33.21  Aligned_cols=21  Identities=33%  Similarity=0.812  Sum_probs=19.4

Q ss_pred             ccccccCcccCChhHHHHHhh
Q 015552           12 VWCYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R   32 (405)
                      ++|..|++.|.....|+.|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            359999999999999999987

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.54  E-value=0.048  Score=54.18  Aligned_cols=55  Identities=24%  Similarity=0.422  Sum_probs=47.7

Q ss_pred             ccccccCcccCChhHHHHHhh------c--Cccccc--ccccCCCChhhHHHHhhhhcccccccc
Q 015552           12 VWCYYCDREFDDEKILVQHQK------A--KHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R------E--KPfkC~--~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      ..|..|.+.|.+...|.+|.+      +  ++|.|.  .|++.|.+.+.+.+|.++|...+...|
T Consensus       290 ~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         290 IKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             CCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            339999999999999998887      6  999999  799999999999999988877665444

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=92.11  E-value=0.14  Score=51.76  Aligned_cols=72  Identities=21%  Similarity=0.356  Sum_probs=52.5

Q ss_pred             cccccCcccCChhHHHHHhhcCcccccccccC-------CCChhhHHHHhhhhccccccccCCCCCCCCccccc--cC--
Q 015552           13 WCYYCDREFDDEKILVQHQKAKHFKCHVCHKK-------LSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IY--   81 (405)
Q Consensus        13 ~C~~CgK~F~~ks~Lk~H~REKPfkC~~CgKs-------Fs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~--iC--   81 (405)
                      .|.+|.+.|-+...|.+|+|+|+-+|.+|++.       |..-..|.+|.+.-|                |-|.  .|  
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----------------y~ct~qtc~~  285 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAH----------------YCCTFQTCRV  285 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCc----------------eEEEEEEEec
Confidence            39999999999999999999777778888763       666677888864434                3332  12  


Q ss_pred             C--CCCCChHHHHHHHhhhcC
Q 015552           82 G--MQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        82 g--k~F~~~s~L~~H~r~h~~  100 (405)
                      |  ..|.....|..|+...++
T Consensus       286 ~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         286 GKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             CcEEEeccHHHHHHHHHHHhh
Confidence            1  247788888899876654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.15  E-value=0.16  Score=33.72  Aligned_cols=21  Identities=33%  Similarity=0.697  Sum_probs=11.5

Q ss_pred             ccccccCcccCChhHHHHHhh
Q 015552           12 VWCYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R   32 (405)
                      ++|.+|++.|.....+..|++
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             eEccccCCccCCHHHHHHHHC
Confidence            345555555555555555554

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=89.35  E-value=0.22  Score=40.05  Aligned_cols=37  Identities=22%  Similarity=0.503  Sum_probs=22.4

Q ss_pred             ChhHHHHHhh---cCcccccccccCCCChhhHHHHhhhhc
Q 015552           23 DEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        23 ~ks~Lk~H~R---EKPfkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      ....+..+.+   ...+.|.+|++.|.....|..|++.++
T Consensus        35 ~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   35 DPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             --------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             cccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            4444445555   457999999999999999999998653

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=88.94  E-value=0.25  Score=50.10  Aligned_cols=60  Identities=20%  Similarity=0.280  Sum_probs=42.4

Q ss_pred             ChhHHHHHhh----cCcc----cccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCC-------CCC
Q 015552           23 DEKILVQHQK----AKHF----KCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ-------GIP   87 (405)
Q Consensus        23 ~ks~Lk~H~R----EKPf----kC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~-------F~~   87 (405)
                      +++.|..|..    |.-|    +|..|.+.|...+.|.+|+|..|                -+|.||++.       |..
T Consensus       200 ~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H----------------E~ChICD~v~p~~~QYFK~  263 (493)
T COG5236         200 RSSTLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH----------------EACHICDMVGPIRYQYFKS  263 (493)
T ss_pred             ecccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhh----------------hhhhhhhccCccchhhhhC
Confidence            4566777766    3233    59999999999999999987766                346777664       456


Q ss_pred             hHHHHHHHhhh
Q 015552           88 PDVLAAHYGEE   98 (405)
Q Consensus        88 ~s~L~~H~r~h   98 (405)
                      -++|.+|.+..
T Consensus       264 Y~~Le~HF~~~  274 (493)
T COG5236         264 YEDLEAHFRNA  274 (493)
T ss_pred             HHHHHHHhhcC
Confidence            67788887643

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.83  E-value=0.14  Score=50.86  Aligned_cols=59  Identities=17%  Similarity=0.152  Sum_probs=49.9

Q ss_pred             CcccccccccCCCChhhHHHHhh--hhccc--cccccCCCCCCCCccccc--cCCCCCCChHHHHHHHhhhcCCCcc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVL--QVHKE--NVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEVPS  104 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r--~hH~e--kp~~cp~~kpgRk~~~C~--iCgk~F~~~s~L~~H~r~h~~e~~~  104 (405)
                      ..+.|..|.+.|.+...|.+|.+  .|..+  ++            +.|.  .|++.|.+.+.+..|...|.+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP------------FSCPYSLCGKLFSRNDALKRHILLHTSISPA  352 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCc------------eeeeccCCCccccccccccCCcccccCCCcc
Confidence            47999999999999999999998  57776  55            5555  7999999999999999998775543

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=88.02  E-value=0.18  Score=58.52  Aligned_cols=88  Identities=10%  Similarity=0.070  Sum_probs=64.9

Q ss_pred             ccccccCcccCChhHHHHHhh-cCcccccccccCCCChhhHHHHhhhhcc-cccccc----CCCCCCCCccccccCCCCC
Q 015552           12 VWCYYCDREFDDEKILVQHQK-AKHFKCHVCHKKLSTAGGMAIHVLQVHK-ENVTKV----PNAKPGRESTDIEIYGMQG   85 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R-EKPfkC~~CgKsFs~~s~L~rH~r~hH~-ekp~~c----p~~kpgRk~~~C~iCgk~F   85 (405)
                      ..|..|++.|.-...+. |.. +++|+|.+|...|.....|..|.+..-. .+...-    +.-.+.++-| |.+|...|
T Consensus      1261 ~~c~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~ 1338 (1406)
T KOG1146|consen 1261 GECGAVDELLTPSFGIS-TLDVTHRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLL 1338 (1406)
T ss_pred             chhhhccccccCcccee-ecccchhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chHHHhhc
Confidence            34999999999888877 777 9999999999999999999999732210 000000    0012334446 99999999


Q ss_pred             CChHHHHHHHhhhcCC
Q 015552           86 IPPDVLAAHYGEEEEE  101 (405)
Q Consensus        86 ~~~s~L~~H~r~h~~e  101 (405)
                      .....|..|+++.+.+
T Consensus      1339 ~~~~alqihm~~~~~~ 1354 (1406)
T KOG1146|consen 1339 SGREALQIHMRSSAHR 1354 (1406)
T ss_pred             chhHHHHHHHHHhhhc
Confidence            9999999999986543

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=87.20  E-value=0.27  Score=46.57  Aligned_cols=84  Identities=18%  Similarity=0.216  Sum_probs=60.7

Q ss_pred             cccccc--cCcccCChhHHHHHhh-cCcccccccccCCCChhhHHHHhhhhcccc-ccccCCCCCCCCcccc--ccCCCC
Q 015552           11 KVWCYY--CDREFDDEKILVQHQK-AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN-VTKVPNAKPGRESTDI--EIYGMQ   84 (405)
Q Consensus        11 Kp~C~~--CgK~F~~ks~Lk~H~R-EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek-p~~cp~~kpgRk~~~C--~iCgk~   84 (405)
                      ++.|++  |-+.|....++..|.. ..--.|.+|.+.|-+...|..|+.-.|..- ..++   ..|.+.|+|  +.|+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~v---eRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGNSCSFCKRAFPTGHLLDAHILEWHDSLFQALV---ERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccchhHHHHHhCCchhhhhHHHHHHHHHHHHHHH---HcCccHHHHHHHhhhhh
Confidence            344887  8888888888777776 334579999999999999999986555321 0011   224566999  689999


Q ss_pred             CCChHHHHHHHhh
Q 015552           85 GIPPDVLAAHYGE   97 (405)
Q Consensus        85 F~~~s~L~~H~r~   97 (405)
                      |......+.|+-.
T Consensus       156 FkT~r~RkdH~I~  168 (253)
T KOG4173|consen  156 FKTSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhhhHHHH
Confidence            9888888888644

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.78  E-value=0.4  Score=41.12  Aligned_cols=37  Identities=19%  Similarity=0.429  Sum_probs=29.5

Q ss_pred             CCCcccccccCcccCChhHHHHHhhcCcccccccccCCCChhhH
Q 015552            8 VSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM   51 (405)
Q Consensus         8 ~geKp~C~~CgK~F~~ks~Lk~H~REKPfkC~~CgKsFs~~s~L   51 (405)
                      .|.|..|..||++|-...       ..|-.|.+||..|.-...+
T Consensus         6 lGtKR~Cp~CG~kFYDLn-------k~PivCP~CG~~~~~~~~~   42 (108)
T PF09538_consen    6 LGTKRTCPSCGAKFYDLN-------KDPIVCPKCGTEFPPEPPL   42 (108)
T ss_pred             cCCcccCCCCcchhccCC-------CCCccCCCCCCccCccccc
Confidence            466777999999997754       4688999999999887333

The function of members of this family is unknown.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=86.43  E-value=0.48  Score=31.42  Aligned_cols=23  Identities=17%  Similarity=0.485  Sum_probs=17.2

Q ss_pred             cccccccccCCCChhhHHHHhhh
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQ   57 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~   57 (405)
                      .|.|.+|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46788888888888788777643

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=85.70  E-value=0.75  Score=34.35  Aligned_cols=25  Identities=20%  Similarity=0.329  Sum_probs=17.7

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK   32 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R   32 (405)
                      ..+.+- |.+|+..+.+..+|++|+.
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle   45 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLE   45 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHH
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHH
Confidence            356666 9999999999999999987

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=85.19  E-value=0.54  Score=29.67  Aligned_cols=18  Identities=22%  Similarity=0.659  Sum_probs=9.7

Q ss_pred             cccccccCCCChhhHHHHh
Q 015552           37 KCHVCHKKLSTAGGMAIHV   55 (405)
Q Consensus        37 kC~~CgKsFs~~s~L~rH~   55 (405)
                      .|..||++| ..+.|.+|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            455566666 334555554

>COG4888 Uncharacterized Zn ribbon-containing protein [General function prediction only]

Probab=84.55  E-value=0.21  Score=42.17  Aligned_cols=17  Identities=24%  Similarity=0.552  Sum_probs=10.3

Q ss_pred             cCcccccccccCCCChh
Q 015552           33 AKHFKCHVCHKKLSTAG   49 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s   49 (405)
                      +|-|.|..|+..-....
T Consensus        20 ~k~FtCp~Cghe~vs~c   36 (104)
T COG4888          20 PKTFTCPRCGHEKVSSC   36 (104)
T ss_pred             CceEecCccCCeeeeEE
Confidence            56677777765544433

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=84.32  E-value=0.58  Score=28.64  Aligned_cols=24  Identities=8%  Similarity=-0.024  Sum_probs=18.4

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      |+|..|+.... ...|.+|++.+++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            57899998887 8899999998753

>KOG2932 consensus E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex [Posttranslational modification, protein turnover, chaperones]

Probab=83.14  E-value=57  Score=33.18  Aligned_cols=25  Identities=12%  Similarity=-0.116  Sum_probs=19.5

Q ss_pred             ccc---ccCCCCCCChHHHHHHHhhhcC
Q 015552           76 TDI---EIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        76 ~~C---~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      |.|   ..|.+.|....+|++|+...++
T Consensus       145 FmC~~~~GC~RTyLsqrDlqAHInhrH~  172 (389)
T KOG2932|consen  145 FMCAAPHGCLRTYLSQRDLQAHINHRHG  172 (389)
T ss_pred             EEeecchhHHHHHhhHHHHHHHhhhhhc
Confidence            556   3588999999999999876554

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=82.45  E-value=0.93  Score=28.60  Aligned_cols=19  Identities=37%  Similarity=0.728  Sum_probs=15.9

Q ss_pred             cccccCcccCChhHHHHHhh
Q 015552           13 WCYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        13 ~C~~CgK~F~~ks~Lk~H~R   32 (405)
                      .|..||+.| ..+.|.+|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            499999999 6677888975

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=81.36  E-value=0.91  Score=39.96  Aligned_cols=38  Identities=11%  Similarity=0.159  Sum_probs=30.0

Q ss_pred             CCCcccccccCcccCChhHHHHHhhcCcccccccccCCCChhhHH
Q 015552            8 VSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMA   52 (405)
Q Consensus         8 ~geKp~C~~CgK~F~~ks~Lk~H~REKPfkC~~CgKsFs~~s~L~   52 (405)
                      .|-|..|..||++|-...       ..|-.|.+||..|.....++
T Consensus         6 lGtKr~Cp~cg~kFYDLn-------k~p~vcP~cg~~~~~~~~~~   43 (129)
T TIGR02300         6 LGTKRICPNTGSKFYDLN-------RRPAVSPYTGEQFPPEEALK   43 (129)
T ss_pred             hCccccCCCcCccccccC-------CCCccCCCcCCccCcchhhc
Confidence            466777999999997654       57899999999987775544

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=80.90  E-value=0.88  Score=44.43  Aligned_cols=42  Identities=19%  Similarity=0.378  Sum_probs=27.0

Q ss_pred             ccccCcccCChhHHHHHhh---cCcccccccccCCCChhhHHHHhhh
Q 015552           14 CYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQ   57 (405)
Q Consensus        14 C~~CgK~F~~ks~Lk~H~R---EKPfkC~~CgKsFs~~s~L~rH~r~   57 (405)
                      |..||..... -.+-+|+.   ..-|.|-.|++.|.+ ...+.|...
T Consensus         6 CnvCgEsvKK-p~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    6 CNVCGESVKK-PQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             hhhhhhhccc-cchHHHHHhccCCeeEEeeccccccc-chhhhhhhh
Confidence            7777765443 34555665   556777778888777 556666533

>COG5188 PRP9 Splicing factor 3a, subunit 3 [RNA processing and modification]

Probab=80.38  E-value=1.4  Score=44.95  Aligned_cols=24  Identities=38%  Similarity=0.753  Sum_probs=19.4

Q ss_pred             CCcccccccCcccCChhHHHHHhh
Q 015552            9 SSKVWCYYCDREFDDEKILVQHQK   32 (405)
Q Consensus         9 geKp~C~~CgK~F~~ks~Lk~H~R   32 (405)
                      .++.||..|+|.|.+.+-+..|..
T Consensus       236 ~~~~YC~~C~r~f~~~~VFe~Hl~  259 (470)
T COG5188         236 FPKVYCVKCGREFSRSKVFEYHLE  259 (470)
T ss_pred             ccceeeHhhhhHhhhhHHHHHHHh
Confidence            467889999999999877766655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	405
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-05
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	2e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	6e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	4e-04
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	5e-04
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	6e-04
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	1e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	2e-04

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 14 CYYCDREFDDEKILVQHQ---KAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN 62
          C YC   F   ++  +H+   + K   C  C +   ++  +  H ++VH +N
Sbjct: 45 CPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4 Length = 124

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 12/74 (16%)

Query: 13  WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLST----------AGGMAIHVLQVHKEN 62
            C  C R F D   L  H ++K  K  +  K+LS           A GM  +V       
Sbjct: 52  RCLACARYFIDSTNLKTHFRSKDHKKRL--KQLSVEPYSQEEAERAAGMGSYVPPRRLAV 109

Query: 63  VTKVPNAKPGREST 76
            T+V    P  +++
Sbjct: 110 PTEVSTEVPEMDTS 123

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 44.4 bits (104), Expect = 6e-05
 Identities = 23/164 (14%), Positives = 41/164 (25%), Gaps = 4/164 (2%)

Query: 114 PQLVGGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPA 173
           PQ           +  PPQ  +  M     +                      +   P  
Sbjct: 32  PQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLHQQIDQATTSMNDMHLHNVPLV 91

Query: 174 AVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTS 233
                 QP  PVQ   P        A          M  +  P+    P    ++  T  
Sbjct: 92  DPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAMGQNMRPMNQLYP----IDLLTEL 147

Query: 234 QSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPS 277
              +    +P   + +     +  S  +++S +   +    VP 
Sbjct: 148 PPPITDLTLPPPPLVIPPERMLVPSELSNASPDYIRSTLNAVPK 191

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 41.7 bits (97), Expect = 4e-04
 Identities = 17/119 (14%), Positives = 30/119 (25%), Gaps = 1/119 (0%)

Query: 128 SYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQN 187
           + P Q     M P        +   +   PQ   P         PA     QQ      +
Sbjct: 20  ATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLHQQIDQATTS 79

Query: 188 VRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTS 246
           +   +     P + P+  + P +P         Q             +++     P   
Sbjct: 80  M-NDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAMGQNMRPMNQ 137

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 41.3 bits (96), Expect = 5e-04
 Identities = 17/153 (11%), Positives = 35/153 (22%)

Query: 127 VSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 186
           +S+  +      Q        P   P    P                    A   +   Q
Sbjct: 1   MSHHKKRVYPQAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQ 60

Query: 187 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTS 246
            + P          Q +  +      + P V  +  + P V     +       P+ + +
Sbjct: 61  FLTPAQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPA 120

Query: 247 IALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQ 279
               S+A  +     +      +      P   
Sbjct: 121 YGQPSAAMGQNMRPMNQLYPIDLLTELPPPITD 153

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 41.0 bits (95), Expect = 6e-04
 Identities = 20/164 (12%), Positives = 34/164 (20%)

Query: 112 SFPQLVGGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPP 171
             P        GQ     P Q  L      +   +        P   P       V +  
Sbjct: 46  GMPPQGAVPSMGQQQFLTPAQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQM 105

Query: 172 PAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNT 231
              +   QQP+      +P  A   +            +    PP+T      P +    
Sbjct: 106 GTPLQQQQQPMAAPAYGQPSAAMGQNMRPMNQLYPIDLLTELPPPITDLTLPPPPLVIPP 165

Query: 232 TSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHV 275
                       S     S+   +  +      +          
Sbjct: 166 ERMLVPSELSNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRP 209

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 42/212 (19%), Positives = 64/212 (30%), Gaps = 21/212 (9%)

Query: 118  GGVVPGQLGVSYPPQSTLGMMQPISAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGY 177
            GGV P            L +   +   P+  +G              A           Y
Sbjct: 1468 GGVTPYSNESGLVNAD-LDVKDELMFSPLVDSGSNDAMAGGFTAYGGADYGEATSPFGAY 1526

Query: 178  AQQPLFPVQNVRPPLASSTSPALQP-----SPVVP------PGMPSSTPPVTVSQPLFPV 226
             + P  P   V  P  S TSP   P     SP  P      P    ++P  + + P +  
Sbjct: 1527 GEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1586

Query: 227  VNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNS 286
             + + +  S  +S   PS S    S           S + +  + SY   S      S S
Sbjct: 1587 TSPSYSPTSPSYSPTSPSYSPTSPSY-------SPTSPSYSPTSPSYSPTSPSYSPTSPS 1639

Query: 287  HSYASGPNTGGPSIGPP--PVIANKAPATQPA 316
            +S  S   +       P  P  +  +P+  P 
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 3  KKKKRVSSKVWCYYCDREFDDEKILVQHQKAKH--------FKCHVCHKKLSTAGGMAIH 54
          ++ K+V     C YC  +  D  +   H  ++H        + C  C+        ++ H
Sbjct: 10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 69

Query: 55 VLQVHK-ENVTKVPNAKPGREST 76
           L+ H  E   K+   K   ++ 
Sbjct: 70 NLKYHPGEENFKLTMVKRNNQTI 92

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	405
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.69
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.68
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.64
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.63
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.62
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.6
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.6
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.59
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.54
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.53
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.52
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.51
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.51
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.51
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.5
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.49
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.48
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.48
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.48
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.47
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.47
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.46
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.43
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.4
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.39
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.37
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.37
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.36
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.36
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.35
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.33
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.31
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.31
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.29
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.28
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.28
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.28
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.26
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.25
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.25
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.25
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.24
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.24
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.22
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.22
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.21
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.21
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.19
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.19
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.17
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.14
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.04
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.01
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.01
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.99
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.99
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.99
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.98
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.98
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.97
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.97
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.96
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.95
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.93
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.91
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.9
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.89
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.88
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.87
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.85
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.84
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.77
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.69
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.67
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.65
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.62
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.62
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.61
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.61
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.61
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.61
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.6
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.6
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.6
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.6
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.6
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.6
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.59
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.59
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.59
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.59
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.58
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.58
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.58
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.58
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.58
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.58
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.58
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.57
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.57
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.57
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.56
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.56
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.56
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.56
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.56
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.56
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.55
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.55
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.55
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.55
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.54
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.54
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.54
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.54
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.53
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.52
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.52
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.52
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.51
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.51
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.51
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.51
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.5
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.5
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.5
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.5
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.5
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.49
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.49
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.49
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.49
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.49
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.49
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.49
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.49
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.48
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.48
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.48
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.47
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.47
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.47
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.47
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.47
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.47
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.47
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.46
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.46
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.46
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.46
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.45
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.45
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.45
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.44
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.44
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.44
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.44
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.44
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.44
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.44
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.43
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.41
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.41
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.41
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.4
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.4
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.4
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.38
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.37
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.37
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.36
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.36
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.35
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.35
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.35
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.34
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.34
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.34
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.32
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.32
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.31
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.31
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.31
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.3
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.3
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.29
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.28
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.28
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.28
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.28
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.27
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.27
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.27
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.27
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.27
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.27
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.27
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.27
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.26
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.26
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.26
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.26
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.26
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.26
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.26
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.26
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.25
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.25
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.25
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.25
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.25
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.25
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.25
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.25
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.24
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.24
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.23
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.23
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.22
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.22
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.22
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.21
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.21
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.21
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.2
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.19
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.19
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.19
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.18
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.18
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.17
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.17
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.14
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.14
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.12
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.1
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.09
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.09
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.08
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.34
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.07
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.07
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.05
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.05
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.04
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.03
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.03
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.03
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.03
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.02
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.02
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.02
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.01
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.01
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.01
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.01
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.01
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.01
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.01
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.01
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.01
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.0
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.0
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	97.99
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.99
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.99
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.24
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.98
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.98
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	97.98
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.98
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.97
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.97
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	97.97
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.97
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.96
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.96
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.96
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.95
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.95
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.95
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.94
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.94
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.94
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.94
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.94
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.93
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.93
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.93
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.92
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	97.91
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.91
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.9
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.89
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.89
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.89
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.89
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.87
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.83
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.83
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.03
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.79
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.76
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.76
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.74
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.67
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.64
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.55
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.52
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.52
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.49
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.41
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.38
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.36
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.35
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.35
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.34
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.29
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.25
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.25
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.23
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.23
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.22
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.22
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.21
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.2
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.17
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.14
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.11
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.11
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.1
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.08
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.07
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.12
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.0
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	96.99
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	96.99
1paa_A	30	Yeast transcription factor ADR1; transcription reg	96.98
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	96.92
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	96.89
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.92
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.88
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.46
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.4
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.3
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.55
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.61
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	93.88
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	89.69
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	89.09
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.51
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.4
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	81.58
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	81.14

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.69  E-value=7.8e-17  Score=131.36  Aligned_cols=86  Identities=21%  Similarity=0.386  Sum_probs=78.4

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCC
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCg   82 (405)
                      ..++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|+
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~   80 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP------------FKCQECG   80 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT------------TSCSSSC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC------------eECCCcC
Confidence            356666 9999999999999999999    8999999999999999999999998887765            8999999


Q ss_pred             CCCCChHHHHHHHhhhcCCCccc
Q 015552           83 MQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        83 k~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +.|.....|.+|++.|.+++...
T Consensus        81 ~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           81 KGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             CCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             CcccCHHHHHHHHHHhCCCCCCc
Confidence            99999999999999999876553

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.68  E-value=2.4e-17  Score=143.08  Aligned_cols=83  Identities=19%  Similarity=0.301  Sum_probs=77.9

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCC
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk   83 (405)
                      |++.| |.+|++.|.....|++|++    +|+|+|.+|++.|.+...|.+|+++|.++++            |.|.+|++
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~------------~~C~~C~k   86 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR------------YQCLACGK   86 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCC------------EEESSSCC
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCcc------------ccCCCCCC
Confidence            78888 9999999999999999999    8999999999999999999999998888775            99999999


Q ss_pred             CCCChHHHHHHHhhhcCCCc
Q 015552           84 QGIPPDVLAAHYGEEEEEVP  103 (405)
Q Consensus        84 ~F~~~s~L~~H~r~h~~e~~  103 (405)
                      .|.....|..|++.|+++.+
T Consensus        87 ~F~~~~~L~~H~~~hh~~~p  106 (133)
T 2lt7_A           87 SFINYQFMSSHIKSVHSQDP  106 (133)
T ss_dssp             EESSHHHHHHHHHHHTCCCT
T ss_pred             CcCCHHHHHHHhHHhcCCCC
Confidence            99999999999999987654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.1e-16  Score=126.33  Aligned_cols=84  Identities=19%  Similarity=0.311  Sum_probs=77.0

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCC
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCg   82 (405)
                      .+++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|+
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~   71 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP------------FKCQICP   71 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC------------EECSSSS
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC------------ccCCCCC
Confidence            356667 9999999999999999999    7999999999999999999999998887765            9999999


Q ss_pred             CCCCChHHHHHHHhhhcCCCc
Q 015552           83 MQGIPPDVLAAHYGEEEEEVP  103 (405)
Q Consensus        83 k~F~~~s~L~~H~r~h~~e~~  103 (405)
                      +.|.....|..|++.|+++..
T Consensus        72 ~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           72 YASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CEESSHHHHHHHHTTCCSCCC
T ss_pred             CccCCHHHHHHHHHHhcCCCC
Confidence            999999999999999987653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.63  E-value=2.5e-16  Score=124.24  Aligned_cols=82  Identities=22%  Similarity=0.416  Sum_probs=73.4

Q ss_pred             CCccc-cc--ccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccC
Q 015552            9 SSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIY   81 (405)
Q Consensus         9 geKp~-C~--~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iC   81 (405)
                      ++|.| |.  .|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C   68 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP------------FACDIC   68 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC------------EECTTT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC------------ccCCCC
Confidence            35667 98  59999999999999999    8999999999999999999999999888775            899999


Q ss_pred             CCCCCChHHHHHHHhhhcCCC
Q 015552           82 GMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        82 gk~F~~~s~L~~H~r~h~~e~  102 (405)
                      ++.|...+.|.+|+++|.+++
T Consensus        69 ~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           69 GRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCEESSHHHHHHHHGGGGC--
T ss_pred             CchhCCHHHHHHHHHHhcccC
Confidence            999999999999999998864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=5.7e-16  Score=127.04  Aligned_cols=85  Identities=9%  Similarity=0.040  Sum_probs=76.2

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh--cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCC
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R--EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~   84 (405)
                      .+++.+ |.+|++.|.....|++|++  +++|+|.+|++.|.+...|.+|++ |+++++            |.|.+|++.
T Consensus        12 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~------------~~C~~C~~~   78 (107)
T 1wjp_A           12 ENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKK------------LTCLECMRT   78 (107)
T ss_dssp             CCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG------------GEEGGGTEE
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCC------------ccCccccch
Confidence            367777 9999999999999999999  899999999999999999999984 777765            999999999


Q ss_pred             CCChHHHHHHHh-hhcCCCccc
Q 015552           85 GIPPDVLAAHYG-EEEEEVPSK  105 (405)
Q Consensus        85 F~~~s~L~~H~r-~h~~e~~~k  105 (405)
                      |.....|.+|++ .|.+++...
T Consensus        79 f~~~~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             CSSHHHHHHHHHHTSCCCCCCC
T ss_pred             hCCHHHHHHHHHHHcCCCCCCC
Confidence            999999999997 777766543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.1e-15  Score=121.82  Aligned_cols=83  Identities=23%  Similarity=0.306  Sum_probs=73.4

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCC
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk   83 (405)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++.          .+.|.|.+|++
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----------~~~~~C~~C~~   73 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV----------GKPYICQSCGK   73 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCC----------CSSBCCSSSCC
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCC----------CCceECCCccc
Confidence            56667 9999999999999999999    899999999999999999999999888762          12299999999


Q ss_pred             CCCChHHHHHHHh-hhcCC
Q 015552           84 QGIPPDVLAAHYG-EEEEE  101 (405)
Q Consensus        84 ~F~~~s~L~~H~r-~h~~e  101 (405)
                      .|.....|..|++ .|.++
T Consensus        74 ~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           74 GFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             CBSSHHHHHHHHHHTSCCC
T ss_pred             hhCCHHHHHHHHHHhcCCC
Confidence            9999999999986 66654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.60  E-value=6.6e-16  Score=119.45  Aligned_cols=76  Identities=18%  Similarity=0.357  Sum_probs=71.2

Q ss_pred             cccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCCh
Q 015552           13 WCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPP   88 (405)
Q Consensus        13 ~C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~   88 (405)
                      .|.+|++.|.....|.+|++    +++|+|.+|++.|.++..|.+|++.|+++++            |.|.+|++.|...
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~   70 (82)
T 2kmk_A            3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP------------HKCQVCGKAFSQS   70 (82)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCC------------EECTTTSCEESSH
T ss_pred             cCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCC------------CcCCCcchhhCCh
Confidence            39999999999999999999    8999999999999999999999999988775            9999999999999


Q ss_pred             HHHHHHHhhhcC
Q 015552           89 DVLAAHYGEEEE  100 (405)
Q Consensus        89 s~L~~H~r~h~~  100 (405)
                      +.|.+|+++|+|
T Consensus        71 ~~l~~H~~~H~g   82 (82)
T 2kmk_A           71 SNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHhhCC
Confidence            999999999864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=9.4e-16  Score=125.92  Aligned_cols=80  Identities=18%  Similarity=0.305  Sum_probs=74.3

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCC
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk   83 (405)
                      +++.| | .|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~   73 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP------------YECNICAK   73 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC------------EECSSSCC
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC------------eeCCCCcc
Confidence            66777 9 99999999999999999    7999999999999999999999998887765            99999999


Q ss_pred             CCCChHHHHHHHhhhcCC
Q 015552           84 QGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        84 ~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.....|.+|++.|+..
T Consensus        74 ~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           74 RFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             EESCHHHHHHHHHHHHHH
T ss_pred             hhcCHHHHHHHHHHcccc
Confidence            999999999999998754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.1e-14  Score=120.86  Aligned_cols=85  Identities=22%  Similarity=0.265  Sum_probs=61.1

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhh---ccccccccCCCCCCCCcccccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV---HKENVTKVPNAKPGRESTDIEI   80 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~h---H~ekp~~cp~~kpgRk~~~C~i   80 (405)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.+   .++++            |.|.+
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~------------~~C~~   71 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV------------FTCSV   71 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC------------EECSS
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC------------eECCC
Confidence            45566 9999999999999999988    78999999999999999999998764   33444            44555


Q ss_pred             CCCCCCChHHHHHHHhhhcCCCccc
Q 015552           81 YGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        81 Cgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      |++.|.....|..|++.|.+++..+
T Consensus        72 C~~~f~~~~~l~~H~~~h~~~~~~~   96 (124)
T 2dlq_A           72 CQETFRRRMELRLHMVSHTGEMPYK   96 (124)
T ss_dssp             SCCEESSHHHHHHHHHHHSSSCSEE
T ss_pred             CCCccCCHHHHHHHHHHcCCCCCcc
Confidence            5555555555555555554444443

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.53  E-value=3e-15  Score=113.13  Aligned_cols=58  Identities=16%  Similarity=0.170  Sum_probs=45.9

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      ||||+|.+|||.|.+.++|.+|+++|.++++            |.|.+||+.|...+.|.+|+++|.++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp------------~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRP------------RSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCC------------EECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcC------------eECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6788888888888888888888877777765            777888888888888888888887753

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.52  E-value=6.1e-15  Score=132.44  Aligned_cols=95  Identities=22%  Similarity=0.345  Sum_probs=71.6

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCC-------------
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK-------------   70 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~k-------------   70 (405)
                      +++.+ |.+|++.|.....|..|++    +++|+|.+|++.|.+...|.+|++.|++++++.|..+.             
T Consensus        74 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  153 (190)
T 2i13_A           74 GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ  153 (190)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             CCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHH
Confidence            45556 8888888888888888887    78888888888888888888888888888877776541             


Q ss_pred             ---CCCCccccccCCCCCCChHHHHHHHhhhcCCCc
Q 015552           71 ---PGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (405)
Q Consensus        71 ---pgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~  103 (405)
                         .+++.|.|.+|++.|.....|..|+++|+++++
T Consensus       154 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          154 RTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             HHHHCCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             HhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence               144558888888888888888888888877653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=1.6e-14  Score=115.93  Aligned_cols=80  Identities=18%  Similarity=0.363  Sum_probs=72.6

Q ss_pred             CCccc-ccc--cCcccCChhHHHHHhh----cCccccc--ccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccc
Q 015552            9 SSKVW-CYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE   79 (405)
Q Consensus         9 geKp~-C~~--CgK~F~~ks~Lk~H~R----EKPfkC~--~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~   79 (405)
                      .++.+ |.+  |++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|++.|+++++            |.|.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~   79 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP------------FQCG   79 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS------------CBCS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC------------eECC
Confidence            34555 997  9999999999999999    8999996  699999999999999999888775            9999


Q ss_pred             cCCCCCCChHHHHHHHhhhcC
Q 015552           80 IYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        80 iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      +|++.|.....|..|++.|.+
T Consensus        80 ~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           80 VCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCcCccCCHHHHHHHHHHhCC
Confidence            999999999999999999864

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.51  E-value=1.3e-14  Score=119.82  Aligned_cols=86  Identities=17%  Similarity=0.336  Sum_probs=75.7

Q ss_pred             CCccc-ccc--cCcccCChhHHHHHhh----cCccccc--ccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccc
Q 015552            9 SSKVW-CYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE   79 (405)
Q Consensus         9 geKp~-C~~--CgK~F~~ks~Lk~H~R----EKPfkC~--~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~   79 (405)
                      +++.+ |.+  |++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|++.|+++++            |.|.
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~   70 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP------------FQCK   70 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC------------EECT
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC------------ccCC
Confidence            45667 997  9999999999999998    8999999  799999999999999999888775            8888


Q ss_pred             cCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           80 IYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        80 iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|++.|.....|..|++.|.+++..+.
T Consensus        71 ~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           71 TCQRKFSRSDHLKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             TTCCEESCHHHHHHHHHHHHTCCCEEC
T ss_pred             ccCchhCCHHHHHHHHHHhcCCCCeeC
Confidence            889999888889999888888776655

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.5e-14  Score=119.64  Aligned_cols=83  Identities=12%  Similarity=0.089  Sum_probs=73.4

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh------cCcc-cccccccCC--CChhhHHHHhhhhccccccccCCCCCCCCccc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK------AKHF-KCHVCHKKL--STAGGMAIHVLQVHKENVTKVPNAKPGRESTD   77 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R------EKPf-kC~~CgKsF--s~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~   77 (405)
                      .+++.| |.+|++.|..+..|++|++      ++++ +|.+|++.|  .+...|.+|++.|+++++            |.
T Consensus        15 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~------------~~   82 (115)
T 2dmi_A           15 TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV------------LK   82 (115)
T ss_dssp             CCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS------------CB
T ss_pred             CCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc------------eE
Confidence            467878 9999999999999999987      3544 599999999  999999999988887775            99


Q ss_pred             cccCCCCCCChHHHHHHHhhhcCCC
Q 015552           78 IEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        78 C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      |.+|++.|.....|.+|++.|+...
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCcc
Confidence            9999999999999999999987553

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.51  E-value=1.9e-14  Score=129.18  Aligned_cols=100  Identities=26%  Similarity=0.405  Sum_probs=64.1

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCC-------------
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK-------------   70 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~k-------------   70 (405)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|++++++.|..+.             
T Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (190)
T 2i13_A           46 GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ  125 (190)
T ss_dssp             --CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH
Confidence            34444 6666666666666666666    56677777777777777777776666666666666531             


Q ss_pred             ---CCCCccccccCCCCCCChHHHHHHHhhhcCCCcccccc
Q 015552           71 ---PGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAK  108 (405)
Q Consensus        71 ---pgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~ak  108 (405)
                         .+.+.|.|.+|++.|.....|..|++.|.+++..+...
T Consensus       126 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  166 (190)
T 2i13_A          126 RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPE  166 (190)
T ss_dssp             HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT
T ss_pred             HHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCC
Confidence               13455777777777777777777777777666555443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.9e-14  Score=119.46  Aligned_cols=81  Identities=17%  Similarity=0.326  Sum_probs=73.2

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh-------cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCcccccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK-------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI   80 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R-------EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~i   80 (405)
                      +++.+ |.+|++.|.....|.+|++       +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+
T Consensus        32 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~   99 (124)
T 2dlq_A           32 GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMP------------YKCSS   99 (124)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCS------------EECSS
T ss_pred             CCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCC
Confidence            56666 9999999999999999986       7899999999999999999999999988775            99999


Q ss_pred             CCCCCCChHHHHHHHhh-hcCC
Q 015552           81 YGMQGIPPDVLAAHYGE-EEEE  101 (405)
Q Consensus        81 Cgk~F~~~s~L~~H~r~-h~~e  101 (405)
                      |++.|.....|.+|++. |.++
T Consensus       100 C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A          100 CSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             SCCEESSHHHHHHHHHHTSSCS
T ss_pred             ccchhCCHHHHHHHHHHHCCCC
Confidence            99999999999999985 5443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.49  E-value=4.3e-14  Score=126.88  Aligned_cols=108  Identities=20%  Similarity=0.243  Sum_probs=87.0

Q ss_pred             CCCCCCCCCCccc-c--cccCcccCChhHHHHHhh----cCcccc--cccccCCCChhhHHHHhhhhccccccccC--CC
Q 015552            1 MGKKKKRVSSKVW-C--YYCDREFDDEKILVQHQK----AKHFKC--HVCHKKLSTAGGMAIHVLQVHKENVTKVP--NA   69 (405)
Q Consensus         1 mgkKkrr~geKp~-C--~~CgK~F~~ks~Lk~H~R----EKPfkC--~~CgKsFs~~s~L~rH~r~hH~ekp~~cp--~~   69 (405)
                      ||.++....++.| |  ..|++.|.....|.+|++    +++|+|  .+|++.|.+...|.+|++.|++++++.|.  .+
T Consensus         1 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   80 (190)
T 1tf6_A            1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGC   80 (190)
T ss_dssp             ---------CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSC
T ss_pred             CccccccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCC
Confidence            6777777677777 9  689999999999999998    899999  88999999999999999999999999888  33


Q ss_pred             C------------------CCCCcccc--ccCCCCCCChHHHHHHHhhhcCCCcccccc
Q 015552           70 K------------------PGRESTDI--EIYGMQGIPPDVLAAHYGEEEEEVPSKMAK  108 (405)
Q Consensus        70 k------------------pgRk~~~C--~iCgk~F~~~s~L~~H~r~h~~e~~~k~ak  108 (405)
                      .                  .+.+.|.|  .+|++.|.....|..|+++|++++..+...
T Consensus        81 ~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  139 (190)
T 1tf6_A           81 DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH  139 (190)
T ss_dssp             CCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCS
T ss_pred             CCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCC
Confidence            1                  34567999  899999999999999999999988877654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.48  E-value=2e-14  Score=119.93  Aligned_cols=89  Identities=16%  Similarity=0.201  Sum_probs=56.2

Q ss_pred             cc--ccCcccCChhHHHHHhh---cCcccccccccCCCChhhHHHHhhhhccccccccCC--CC----------------
Q 015552           14 CY--YCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--AK----------------   70 (405)
Q Consensus        14 C~--~CgK~F~~ks~Lk~H~R---EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~--~k----------------   70 (405)
                      |.  .|++.|.....|.+|++   +++|+|.+|++.|.+...|.+|++.|++++++.|..  +.                
T Consensus         8 C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   87 (124)
T 1ubd_C            8 CPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH   87 (124)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHh
Confidence            66  57777777777777766   566777777777777777777776666666544432  21                


Q ss_pred             CCCCccccc--cCCCCCCChHHHHHHHhhhcCCC
Q 015552           71 PGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        71 pgRk~~~C~--iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      .+.+.|.|.  .|++.|.....|.+|+++|++++
T Consensus        88 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           88 TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             HCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             CCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            122347773  47777777777777777776654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.48  E-value=2.1e-15  Score=119.61  Aligned_cols=79  Identities=19%  Similarity=0.232  Sum_probs=72.3

Q ss_pred             Cccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCC
Q 015552           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (405)
Q Consensus        10 eKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~   84 (405)
                      ||.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+.+.|.+|++.||+..             |.|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~-------------~~c~~C~~~   67 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILP-------------ILEDKVEEL   67 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHH-------------HHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCc-------------chHHHHHHH
Confidence            4667 9999999999999999999    899999999999999999999999998644             899999999


Q ss_pred             CCChHHHHHHHhhhcCC
Q 015552           85 GIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        85 F~~~s~L~~H~r~h~~e  101 (405)
                      |.....|..|++.+++.
T Consensus        68 f~~~~~L~~H~~~~h~~   84 (88)
T 1llm_C           68 LSKNYHLENEVARLKKL   84 (88)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHHHH
Confidence            99999999999887643

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.48  E-value=1.8e-14  Score=108.79  Aligned_cols=53  Identities=17%  Similarity=0.465  Sum_probs=49.6

Q ss_pred             Cccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        10 eKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      ||+| |.+|||.|.+.+.|++|++    ||+|+|.+||++|.+.++|.+|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7888 9999999999999999999    999999999999999999999998877653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.47  E-value=4.1e-14  Score=122.72  Aligned_cols=96  Identities=16%  Similarity=0.124  Sum_probs=72.6

Q ss_pred             Cccc-ccccCcccCChhHHHHHhh-----cCc--------ccccccccCCCChhhHHHHhhhhccccccccCC--CC---
Q 015552           10 SKVW-CYYCDREFDDEKILVQHQK-----AKH--------FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--AK---   70 (405)
Q Consensus        10 eKp~-C~~CgK~F~~ks~Lk~H~R-----EKP--------fkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~--~k---   70 (405)
                      ++.+ |.+|++.|.....|.+|++     +++        |+|.+|++.|.....|.+|++.|++++++.|..  +.   
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  102 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF  102 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence            3444 8888888888888888876     222        778888888888888888888877777777754  31   


Q ss_pred             -------------CCCCcccccc--CCCCCCChHHHHHHHhhhcCCCccc
Q 015552           71 -------------PGRESTDIEI--YGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        71 -------------pgRk~~~C~i--Cgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                                   .+.+.|.|.+  |++.|.....|.+|+++|++++.++
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSC
T ss_pred             CCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence                         2445588886  9999999999999999998877654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.47  E-value=3.2e-14  Score=117.45  Aligned_cols=78  Identities=24%  Similarity=0.422  Sum_probs=72.0

Q ss_pred             CCccc-cc--ccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCcccc--c
Q 015552            9 SSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI--E   79 (405)
Q Consensus         9 geKp~-C~--~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C--~   79 (405)
                      +++.+ |.  .|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.|+++++            |.|  .
T Consensus        33 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~  100 (119)
T 2jp9_A           33 GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP------------FSCRWP  100 (119)
T ss_dssp             TTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCC------------EECCST
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCC------------eeCCCC
Confidence            45666 99  69999999999999999    8999999999999999999999999988775            888  7


Q ss_pred             cCCCCCCChHHHHHHHhhh
Q 015552           80 IYGMQGIPPDVLAAHYGEE   98 (405)
Q Consensus        80 iCgk~F~~~s~L~~H~r~h   98 (405)
                      +|++.|.....|.+|+++|
T Consensus       101 ~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A          101 SCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             TCCCEESSHHHHHHHHHTC
T ss_pred             CCccccCCHHHHHHHHhcC
Confidence            9999999999999999876

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.46  E-value=4.4e-14  Score=110.94  Aligned_cols=75  Identities=19%  Similarity=0.309  Sum_probs=70.0

Q ss_pred             ccccc--cCcccCChhHHHHHhh----cCccccc--ccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCC
Q 015552           12 VWCYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (405)
Q Consensus        12 p~C~~--CgK~F~~ks~Lk~H~R----EKPfkC~--~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk   83 (405)
                      +.|.+  |++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|++.|+++++            |.|.+|++
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~   73 (89)
T 2wbs_A            6 HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP------------FQCQKCDR   73 (89)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC------------EECSSSSC
T ss_pred             eeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCCCCc
Confidence            44999  9999999999999999    8999997  599999999999999998888775            99999999


Q ss_pred             CCCChHHHHHHHhhh
Q 015552           84 QGIPPDVLAAHYGEE   98 (405)
Q Consensus        84 ~F~~~s~L~~H~r~h   98 (405)
                      .|...+.|..|++.|
T Consensus        74 ~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           74 AFSRSDHLALHMKRH   88 (89)
T ss_dssp             EESSHHHHHHHGGGG
T ss_pred             ccCCHHHHHHHHHhh
Confidence            999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.43  E-value=1e-13  Score=115.66  Aligned_cols=82  Identities=21%  Similarity=0.338  Sum_probs=60.2

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccc--cccCCCChhhHHHHhhhhccccccccCCCCCCCCccccc-c
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE-I   80 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~--CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~-i   80 (405)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+  |++.|.+...|.+|++.|++++++.|+.       -.|. .
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-------~~C~~~  103 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF-------DGCNKK  103 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCS-------TTCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCC-------CCCCCc
Confidence            45666 9999999999999999888    78899975  9999999999999988888888888853       1343 3


Q ss_pred             CCCCCCChHHHHHHHhh
Q 015552           81 YGMQGIPPDVLAAHYGE   97 (405)
Q Consensus        81 Cgk~F~~~s~L~~H~r~   97 (405)
                      ....-.-...+..|...
T Consensus       104 f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C          104 FAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             CSSTTTTHHHHHHHC--
T ss_pred             cCCHHHHHHHHHHHccc
Confidence            33444455666666543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.8e-13  Score=111.21  Aligned_cols=74  Identities=19%  Similarity=0.113  Sum_probs=62.3

Q ss_pred             cCChhHHHHHhh----cCcccccccccCCC-ChhhHHHHhhhhcc-ccccccCCCCCCCCccccccCCCCCCChHHHHHH
Q 015552           21 FDDEKILVQHQK----AKHFKCHVCHKKLS-TAGGMAIHVLQVHK-ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAH   94 (405)
Q Consensus        21 F~~ks~Lk~H~R----EKPfkC~~CgKsFs-~~s~L~rH~r~hH~-ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H   94 (405)
                      +.....+.+|++    +++|+|.+|++.|. ++.+|++|+++|++ +++            |.|.+|++.|.....|.+|
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~------------~~C~~C~k~F~~~~~L~~H   73 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA------------LKCQHCRKQFKSKAGLNYH   73 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH------------HSCSSSCCCCSCHHHHHHH
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC------------EECCCCCCccCCHHHHHHH
Confidence            333444455555    89999999999999 99999999999988 765            9999999999999999999


Q ss_pred             HhhhcCCCcccc
Q 015552           95 YGEEEEEVPSKM  106 (405)
Q Consensus        95 ~r~h~~e~~~k~  106 (405)
                      ++.|+++++...
T Consensus        74 ~~~h~~~kp~~~   85 (98)
T 2gqj_A           74 TMAEHSAKPSDA   85 (98)
T ss_dssp             HHHHSCSCSSCC
T ss_pred             HHHHcCCCCCCC
Confidence            999998876433

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.39  E-value=5.9e-13  Score=115.38  Aligned_cols=75  Identities=19%  Similarity=0.191  Sum_probs=54.2

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc---------cccCCCC----------------CCCCcccccc--CCCCC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV---------TKVPNAK----------------PGRESTDIEI--YGMQG   85 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp---------~~cp~~k----------------pgRk~~~C~i--Cgk~F   85 (405)
                      ++.|.|.+|++.|.+...|.+|++.+|.++.         +.|..+.                .+.+.|.|.+  |++.|
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  102 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF  102 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence            6778999999999999999999887555432         4565431                1345577776  88888


Q ss_pred             CChHHHHHHHhhhcCCCccccc
Q 015552           86 IPPDVLAAHYGEEEEEVPSKMA  107 (405)
Q Consensus        86 ~~~s~L~~H~r~h~~e~~~k~a  107 (405)
                      .....|.+|++.|.+++.++..
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~  124 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCE  124 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCS
T ss_pred             CCHHHHHHHHHhhCCCCCccCC
Confidence            8888888888777777666554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.6e-13  Score=103.71  Aligned_cols=66  Identities=24%  Similarity=0.382  Sum_probs=59.7

Q ss_pred             CCccc-ccc--cCcccCChhHHHHHhh-----cCcccccc--cccCCCChhhHHHHhhhhccccccccCCCCCCCCcccc
Q 015552            9 SSKVW-CYY--CDREFDDEKILVQHQK-----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI   78 (405)
Q Consensus         9 geKp~-C~~--CgK~F~~ks~Lk~H~R-----EKPfkC~~--CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C   78 (405)
                      +++.+ |..  |++.|..+..|++|++     +++|+|.+  |++.|.++..|.+|+++|+++++            |.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C   71 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD------------YIC   71 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC------------CSC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC------------eeC
Confidence            55666 887  9999999999999986     89999999  99999999999999999988876            899


Q ss_pred             ccCCCCCC
Q 015552           79 EIYGMQGI   86 (405)
Q Consensus        79 ~iCgk~F~   86 (405)
                      .+|++.|.
T Consensus        72 ~~C~k~F~   79 (79)
T 2dlk_A           72 EFSGPSSG   79 (79)
T ss_dssp             CSSSCCCC
T ss_pred             CCCCCCCC
Confidence            99999883

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.37  E-value=3.3e-13  Score=116.87  Aligned_cols=74  Identities=19%  Similarity=0.376  Sum_probs=66.0

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCC
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk   83 (405)
                      +++.| |.+|++.|.+...|.+|++    |++|+|.+|++.|.+++.|.+|+++||+++++.+.      +.|+|.+|++
T Consensus        47 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~------k~~~C~~C~k  120 (133)
T 2lt7_A           47 WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDS------KLYRLHPCRS  120 (133)
T ss_dssp             CCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSS------CCEEECCCCS
T ss_pred             CCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCC------CCeecCCCCc
Confidence            67777 9999999999999999999    89999999999999999999999999998864442      2399999999


Q ss_pred             CCCCh
Q 015552           84 QGIPP   88 (405)
Q Consensus        84 ~F~~~   88 (405)
                      .|...
T Consensus       121 ~~~~~  125 (133)
T 2lt7_A          121 LQIRQ  125 (133)
T ss_dssp             SCCCC
T ss_pred             hhhhc
Confidence            98754

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=6.4e-13  Score=102.51  Aligned_cols=58  Identities=19%  Similarity=0.391  Sum_probs=43.2

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.++..|.+|+++|+++++|+|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45566 8888888888888887777    6778888888888888888888777777766433

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.36  E-value=4.6e-13  Score=103.78  Aligned_cols=72  Identities=19%  Similarity=0.291  Sum_probs=66.1

Q ss_pred             cc--cccCcccCChhHHHHHhh----cCcccccc--cccCCCChhhHHHHhhhhccccccccCCCCCCCCcccccc---C
Q 015552           13 WC--YYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI---Y   81 (405)
Q Consensus        13 ~C--~~CgK~F~~ks~Lk~H~R----EKPfkC~~--CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~i---C   81 (405)
                      .|  ..|++.|.....|++|++    +++|+|.+  |++.|.+...|.+|+++|++               |.|.+   |
T Consensus         3 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---------------~~C~~~~~C   67 (85)
T 2j7j_A            3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---------------YPCKKDDSC   67 (85)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---------------EECCSCSSC
T ss_pred             cCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---------------CCCCCCCCC
Confidence            39  889999999999999999    89999998  99999999999999988875               56777   9


Q ss_pred             CCCCCChHHHHHHHhhhc
Q 015552           82 GMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        82 gk~F~~~s~L~~H~r~h~   99 (405)
                      ++.|.....|.+|++.|+
T Consensus        68 ~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           68 SFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CCEESSHHHHHHHHHHCC
T ss_pred             CCccCCHHHHHHHHHhcC
Confidence            999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.35  E-value=5.5e-13  Score=115.19  Aligned_cols=92  Identities=20%  Similarity=0.295  Sum_probs=67.6

Q ss_pred             CCccc-ccc-----cCcccCChhHHHHHhh----cCcccccc--cccCCCChhhHHHHhhhhccccccccCC--CC----
Q 015552            9 SSKVW-CYY-----CDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPN--AK----   70 (405)
Q Consensus         9 geKp~-C~~-----CgK~F~~ks~Lk~H~R----EKPfkC~~--CgKsFs~~s~L~rH~r~hH~ekp~~cp~--~k----   70 (405)
                      +++.+ |.+     |++.|.....|++|++    +++|+|.+  |++.|.+...|.+|++.|++++++.|..  +.    
T Consensus        31 ~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  110 (155)
T 2gli_A           31 ERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFS  110 (155)
T ss_dssp             CSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEES
T ss_pred             CCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccC
Confidence            44555 664     4589999999999988    78999985  9999999999999998888888766653  21    


Q ss_pred             -------------CCCCcccccc--CCCCCCChHHHHHHHhhhcC
Q 015552           71 -------------PGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        71 -------------pgRk~~~C~i--Cgk~F~~~s~L~~H~r~h~~  100 (405)
                                   .+.+.|.|.+  |++.|.....|.+|++.|+|
T Consensus       111 ~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          111 NASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             SSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence                         2334466766  77777777777777666653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.33  E-value=3.5e-13  Score=113.72  Aligned_cols=75  Identities=12%  Similarity=0.143  Sum_probs=65.8

Q ss_pred             cccccCcccC------ChhHHHHHhh---cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCC
Q 015552           13 WCYYCDREFD------DEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (405)
Q Consensus        13 ~C~~CgK~F~------~ks~Lk~H~R---EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk   83 (405)
                      +|.+|++.|.      ....|..|++   +|+|+|.+|++.|.+..+|.+|+++|  +++            |.|.+|++
T Consensus        43 ~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~------------~~C~~C~k  108 (129)
T 2wbt_A           43 IRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHT------------KVCPVCKK  108 (129)
T ss_dssp             HHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCC------------CBCTTTCC
T ss_pred             cchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCC------------CCCCCCCc
Confidence            3777776665      7788888888   99999999999999999999999776  554            89999999


Q ss_pred             CCCChHHHHHHHhhhcCC
Q 015552           84 QGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        84 ~F~~~s~L~~H~r~h~~e  101 (405)
                      .|...+.|.+|++.|+++
T Consensus       109 ~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          109 EFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             BCSSHHHHHHHHHHTTCC
T ss_pred             ccCCHHHHHHHHHHHCCc
Confidence            999999999999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.31  E-value=2.3e-12  Score=115.52  Aligned_cols=92  Identities=22%  Similarity=0.315  Sum_probs=59.8

Q ss_pred             CCccc-c--cccCcccCChhHHHHHhh----cCccccc--ccccCCCChhhHHHHhhhhc--ccccccc--CCCC-----
Q 015552            9 SSKVW-C--YYCDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVH--KENVTKV--PNAK-----   70 (405)
Q Consensus         9 geKp~-C--~~CgK~F~~ks~Lk~H~R----EKPfkC~--~CgKsFs~~s~L~rH~r~hH--~ekp~~c--p~~k-----   70 (405)
                      +++.+ |  ..|++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|++.+|  +++++.|  ..+.     
T Consensus        39 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~  118 (190)
T 1tf6_A           39 GEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKK  118 (190)
T ss_dssp             CCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSS
T ss_pred             CCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCC
Confidence            34444 6  556666666666666666    5666666  56666666666666663443  3445555  3331     


Q ss_pred             -----------CCCCcccccc--CCCCCCChHHHHHHHhhhcC
Q 015552           71 -----------PGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        71 -----------pgRk~~~C~i--Cgk~F~~~s~L~~H~r~h~~  100 (405)
                                 .+.+.|.|.+  |++.|.....|.+|+++|++
T Consensus       119 ~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          119 HNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence                       2344588877  99999999999999988876

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.8e-12  Score=101.05  Aligned_cols=65  Identities=26%  Similarity=0.447  Sum_probs=47.9

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----c----CcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----A----KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE   79 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----E----KPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~   79 (405)
                      +++.| |.+|++.|.....|.+|++    +    ++|+|.+|++.|.++..|.+|++.|++++.            +.|.
T Consensus        12 ~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~------------~~~~   79 (86)
T 1x6h_A           12 GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG------------VEGE   79 (86)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS------------CCCC
T ss_pred             CCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC------------cccC
Confidence            56666 8888888888888888876    2    678888888888888888888877777665            5666


Q ss_pred             cCCCCC
Q 015552           80 IYGMQG   85 (405)
Q Consensus        80 iCgk~F   85 (405)
                      .|+..|
T Consensus        80 ~~~~~~   85 (86)
T 1x6h_A           80 NSGPSS   85 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            666543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.29  E-value=1.9e-12  Score=99.12  Aligned_cols=59  Identities=27%  Similarity=0.356  Sum_probs=33.6

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~  103 (405)
                      +++|+|.+|++.|.++..|.+|++.|+++++            |.|.+|++.|.....|.+|++.|.++++
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKP------------YRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS------------EECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCC------------EECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            4555565566666655556666555554443            5555566666666666666555555543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.28  E-value=2.2e-12  Score=98.68  Aligned_cols=56  Identities=21%  Similarity=0.489  Sum_probs=51.8

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+++.| |.+|++.|..+..|++|++    +++|+|.+|++.|.++..|.+|+++|+++++
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            356777 9999999999999999999    8999999999999999999999999988875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.28  E-value=6.7e-12  Score=108.31  Aligned_cols=96  Identities=21%  Similarity=0.230  Sum_probs=71.9

Q ss_pred             ccc-ccccCcccCChhHHHHHhh-------cCccccccc-----ccCCCChhhHHHHhhhhccccccccCC--CC-----
Q 015552           11 KVW-CYYCDREFDDEKILVQHQK-------AKHFKCHVC-----HKKLSTAGGMAIHVLQVHKENVTKVPN--AK-----   70 (405)
Q Consensus        11 Kp~-C~~CgK~F~~ks~Lk~H~R-------EKPfkC~~C-----gKsFs~~s~L~rH~r~hH~ekp~~cp~--~k-----   70 (405)
                      ..+ |..|++.|.....|.+|++       +++|+|.+|     ++.|.+...|.+|++.|++++++.|..  +.     
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            345 9999999999999999986       689998753     499999999999999999988866652  21     


Q ss_pred             -----------CCCCcccccc--CCCCCCChHHHHHHH-hhhcCCCcccc
Q 015552           71 -----------PGRESTDIEI--YGMQGIPPDVLAAHY-GEEEEEVPSKM  106 (405)
Q Consensus        71 -----------pgRk~~~C~i--Cgk~F~~~s~L~~H~-r~h~~e~~~k~  106 (405)
                                 .+.+.|.|.+  |++.|.....|..|+ +.|.+++..+.
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  131 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVC  131 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEEC
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeC
Confidence                       2344566665  666666666666666 56665555443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=4.2e-12  Score=103.72  Aligned_cols=71  Identities=14%  Similarity=0.136  Sum_probs=63.2

Q ss_pred             CcccCChhHHHHHhh----cCcccccccccCC-CChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHH
Q 015552           18 DREFDDEKILVQHQK----AKHFKCHVCHKKL-STAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (405)
Q Consensus        18 gK~F~~ks~Lk~H~R----EKPfkC~~CgKsF-s~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~   92 (405)
                      ...|.....|.+|++    +++|+|.+|++.| .++.+|++|+++| ++++            |.|.+|++.|.....|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~------------~~C~~Cgk~F~~~~~L~   79 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM------------FTCHHCGKQLRSLAGMK   79 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCC------------CCCSSSCCCCSSHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC------------eECCCCCCeeCCHHHHH
Confidence            456778888888888    8999999999999 9999999999888 7765            99999999999999999


Q ss_pred             HH-HhhhcCC
Q 015552           93 AH-YGEEEEE  101 (405)
Q Consensus        93 ~H-~r~h~~e  101 (405)
                      .| +++|.++
T Consensus        80 ~H~~~~H~~~   89 (96)
T 2ctd_A           80 YHVMANHNSL   89 (96)
T ss_dssp             HHHHHHTCCC
T ss_pred             HHhHHhcCCC
Confidence            99 8888754

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.26  E-value=9e-13  Score=106.21  Aligned_cols=57  Identities=19%  Similarity=0.248  Sum_probs=43.2

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHH-hhhcCC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHY-GEEEEE  101 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~-r~h~~e  101 (405)
                      ++.|.|.+|++.|.++.+|.+|+++|+++++            |.|.+|++.|...+.|.+|+ +.|.+|
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQV------------FPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSS------------EECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCc------------cCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            6778888888888888888888877777765            77778888888888888885 445554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=3.2e-12  Score=96.75  Aligned_cols=54  Identities=20%  Similarity=0.439  Sum_probs=33.8

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      +++.| |.+|++.|.....|++|++    +++|+|.+|++.|.++..|.+|++.||+++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            34445 6666666666666666666    566666666666666666666666666555

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=4.4e-12  Score=96.71  Aligned_cols=58  Identities=17%  Similarity=0.092  Sum_probs=32.5

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      +|+|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|++.|+++.
T Consensus        12 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~------------~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKP------------YKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHGGGCSCC------------EECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCccCCCCCCccCCHHHHHHHHHhcCCCCC------------eECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            5555555555555555555555555554443            555555555555555555555555543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=3.6e-12  Score=96.52  Aligned_cols=59  Identities=15%  Similarity=0.218  Sum_probs=54.9

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~  103 (405)
                      +|+|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|++.|+++++
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRP------------FKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCS------------EECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCC------------EeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            8999999999999999999999998887765            9999999999999999999999998754

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=5.1e-12  Score=97.42  Aligned_cols=61  Identities=21%  Similarity=0.285  Sum_probs=56.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +|+|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|+++|+++++++
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKP------------YKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS------------EECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcC------------eeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            8999999999999999999999998887765            999999999999999999999999887653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=3.9e-12  Score=97.00  Aligned_cols=59  Identities=31%  Similarity=0.539  Sum_probs=53.0

Q ss_pred             CCCCCCCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552            4 KKKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus         4 Kkrr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      .+...+++.| |.+|++.|.....|++|++    +++|+|.+|++.|.++..|.+|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3444577888 9999999999999999999    899999999999999999999999888764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=5.9e-12  Score=104.77  Aligned_cols=60  Identities=17%  Similarity=0.306  Sum_probs=48.8

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh--------cCcccccccccCCCChhhHHHH-hhhhcccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK--------AKHFKCHVCHKKLSTAGGMAIH-VLQVHKENVTKV   66 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R--------EKPfkC~~CgKsFs~~s~L~rH-~r~hH~ekp~~c   66 (405)
                      +.++++| |.+|++.|..++.|++|++        +|+|+|.+||+.|.+++.|.+| ++.|.++++|.|
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C   82 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKL   82 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeC
Confidence            3377777 9999999999999988874        4789999999999999999999 777887776333

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.22  E-value=5e-12  Score=91.40  Aligned_cols=54  Identities=17%  Similarity=0.189  Sum_probs=30.0

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      |+|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|...+.|..|++.|+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKP------------YKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCC------------EECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCC------------cCCCCCcchhCCHHHHHHHHHHhc
Confidence            455566666666666666666555555443            555556666666666666655554

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.21  E-value=6.5e-12  Score=90.80  Aligned_cols=52  Identities=27%  Similarity=0.552  Sum_probs=45.6

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      +++.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            35666 9999999999999999999    8999999999999999999999998874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=6e-12  Score=98.00  Aligned_cols=73  Identities=14%  Similarity=0.131  Sum_probs=60.5

Q ss_pred             HHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           27 LVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        27 Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      |.+|++    +|+|+|.+|++.|.+...|.+|++.+|.++.        .++.|.|.+|++.|.....|..|++.|+++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~--------~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   74 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF--------VPAAFVCSKCGKTFTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC--------CCCCEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC--------CCcceECCCCCChhCCHHHHHHHHHHccCCC
Confidence            344555    8999999999999999999999988887630        1123999999999999999999999999887


Q ss_pred             ccccc
Q 015552          103 PSKMA  107 (405)
Q Consensus       103 ~~k~a  107 (405)
                      .....
T Consensus        75 ~~~~~   79 (86)
T 1x6h_A           75 GVEGE   79 (86)
T ss_dssp             SCCCC
T ss_pred             CcccC
Confidence            66543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.19  E-value=1.2e-11  Score=99.56  Aligned_cols=53  Identities=23%  Similarity=0.542  Sum_probs=47.7

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      .++.+ |.+|+|.|.++..|++|++    +|+|+|.+|+|+|.++++|.+|++..|.+
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            34556 9999999999999999999    99999999999999999999998666643

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=8.5e-12  Score=101.28  Aligned_cols=55  Identities=20%  Similarity=0.391  Sum_probs=51.6

Q ss_pred             CCccc-ccccCcccC-ChhHHHHHhh-----cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552            9 SSKVW-CYYCDREFD-DEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus         9 geKp~-C~~CgK~F~-~ks~Lk~H~R-----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +++.| |.+|++.|. .+..|++|++     +|+|+|.+|++.|.++..|.+|++.||++++
T Consensus        21 ~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           21 ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            56777 999999999 9999999998     6899999999999999999999999999886

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.17  E-value=1.7e-11  Score=88.62  Aligned_cols=55  Identities=9%  Similarity=0.139  Sum_probs=37.1

Q ss_pred             cccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|...+.|.+|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP------------YHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC------------EECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC------------ccCCCCCchhcCHHHHHHHHHHhccc
Confidence            46677777777777777777666665544            66667777777777777777666654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=8.4e-12  Score=96.16  Aligned_cols=58  Identities=24%  Similarity=0.453  Sum_probs=36.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      +|+|+|.+|++.|.++..|.+|++.+|.++          .+.|.|.+|++.|.....|.+|++.+++
T Consensus        13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~----------~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           13 EKPYECYICHARFTQSGTMKMHILQKHTEN----------VAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHHSSSS----------CSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCeECCCcCchhCCHHHHHHHHHHhcCCC----------CCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            667777777777777777777765444321          0126667777777777777777666544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=3.1e-11  Score=88.26  Aligned_cols=56  Identities=16%  Similarity=0.237  Sum_probs=39.8

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHH-hhhcCC
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHY-GEEEEE  101 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~-r~h~~e  101 (405)
                      |+|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|...+.|.+|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP------------YPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS------------EECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC------------ccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            567777777777777777777777666554            77777777777777777775 455543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.13  E-value=2.6e-11  Score=87.54  Aligned_cols=50  Identities=18%  Similarity=0.482  Sum_probs=47.5

Q ss_pred             cccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           13 WCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        13 ~C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      .|.+|++.|.....|.+|++    +++|+|.+|++.|.+.+.|.+|+++|++++
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             BCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             cCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            49999999999999999999    899999999999999999999999998775

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=3.8e-11  Score=92.47  Aligned_cols=55  Identities=20%  Similarity=0.550  Sum_probs=50.3

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh------cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R------EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      .++|.| |.+|++.|..+..|++|++      +++|+|.+|++.|.++..|.+|++.+|...
T Consensus        11 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           11 SGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            467888 9999999999999999986      389999999999999999999999988765

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4.1e-11  Score=92.35  Aligned_cols=59  Identities=17%  Similarity=0.245  Sum_probs=42.1

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      .+|+|+|.+|++.|.++..|.+|++.|+++.         +++.|.|.+|++.|...+.|.+|++.++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~---------~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETV---------AALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHT---------TTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccC---------CCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            3678888888888888888888887777521         0112778888888888888888875443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=1.7e-11  Score=91.30  Aligned_cols=56  Identities=16%  Similarity=0.263  Sum_probs=40.9

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhc--cccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH--KENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH--~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      +|+|+|.+|++.|.+..+|.+|++.+|  ++++            |.|.+|++.|...+.|..|++.|++
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~------------~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV------------YPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC------------EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcC------------eECCCCCCccCCHHHHHHHHHHHcC
Confidence            677778778888877777877776644  3332            7777788888888888888777765

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.3e-11  Score=92.85  Aligned_cols=54  Identities=26%  Similarity=0.438  Sum_probs=49.3

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh-------cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK-------AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R-------EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      ++|.| |.+|++.|..+..|.+|++       +++|+|.+|++.|.+++.|.+|++.+|.+.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            67788 9999999999999999988       489999999999999999999997777654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=4.6e-11  Score=88.95  Aligned_cols=53  Identities=25%  Similarity=0.567  Sum_probs=48.9

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh------cCcccccccccCCCChhhHHHHhhhhcc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R------EKPfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      .+++.| |.+|++.|.....|.+|++      +++|+|.+|++.|.+++.|.+|++.+|+
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            6 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            367778 9999999999999999986      6899999999999999999999999886

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=8.2e-11  Score=85.96  Aligned_cols=51  Identities=24%  Similarity=0.615  Sum_probs=45.8

Q ss_pred             cc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           12 VW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        12 p~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      .| |.+|++.|.....|.+|++    +++|+|.+|++.|.+++.|.+|++..|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            45 9999999999999999999    899999999999999999999975555443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.05  E-value=1.8e-10  Score=93.29  Aligned_cols=56  Identities=23%  Similarity=0.520  Sum_probs=51.8

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~   64 (405)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|++++++
T Consensus        42 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           42 DERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             CSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCC
T ss_pred             CCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCC
Confidence            55666 9999999999999999999    89999999999999999999999999988764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=6.6e-11  Score=89.85  Aligned_cols=54  Identities=15%  Similarity=0.261  Sum_probs=40.6

Q ss_pred             cCccccc--ccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhh
Q 015552           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEE   98 (405)
Q Consensus        33 EKPfkC~--~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h   98 (405)
                      +++|+|.  .|++.|.++..|.+|++.|+++++            |.|.+|++.|...+.|.+|+++|
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP------------FQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC------------EECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC------------eECCCCCchhCCHHHHHHHHHhc
Confidence            6777776  488888887778888777766654            77777888887777777777766

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=1.7e-10  Score=94.03  Aligned_cols=54  Identities=24%  Similarity=0.399  Sum_probs=47.2

Q ss_pred             CCccc-ccccCccc-CChhHHHHHhh---cCcccccccccCCCChhhHHHH-hhhhccccc
Q 015552            9 SSKVW-CYYCDREF-DDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIH-VLQVHKENV   63 (405)
Q Consensus         9 geKp~-C~~CgK~F-~~ks~Lk~H~R---EKPfkC~~CgKsFs~~s~L~rH-~r~hH~ekp   63 (405)
                      +++.| |.+|+|.| ..+..|+.|++   +|+|+|.+|+|.|.++..|++| ++.| .+++
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H-~~~p   90 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANH-NSLP   90 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHT-CCCS
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhc-CCCC
Confidence            35666 99999999 99999999998   8999999999999999999999 6555 4443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=9.2e-11  Score=97.51  Aligned_cols=68  Identities=16%  Similarity=0.115  Sum_probs=56.6

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHH-HhhhcCCCcccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAH-YGEEEEEVPSKMAK  108 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H-~r~h~~e~~~k~ak  108 (405)
                      ||+|+|.+|++.|.++++|.+|++.+|.+.        .+++.|.|.+||+.|.....|..| +++|.++++++...
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~--------~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNV--------VLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSC--------CCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCC--------CCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            999999999999999999999997544210        012239999999999999999999 89999998887654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.01  E-value=2.6e-10  Score=90.54  Aligned_cols=67  Identities=13%  Similarity=-0.015  Sum_probs=42.9

Q ss_pred             ccccccccCCCChhhHHHHhhh-hccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQ-VHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~-hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      |.|.+|++.|.+..+|.+|++. |.++++..+-.+..    |.|.+|++.|.....|.+|+++|.++++++.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~----~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW----EECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCC----TTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceec----cCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            5677777777777777777766 33333211111222    7777777777777777777777777766653

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.4e-10  Score=87.07  Aligned_cols=50  Identities=20%  Similarity=0.374  Sum_probs=32.4

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh---cCccccc-ccccCCCChhhHHHHhhhhc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK---AKHFKCH-VCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R---EKPfkC~-~CgKsFs~~s~L~rH~r~hH   59 (405)
                      ++|++ |.+|++.|. ...|+.|++   +|+|+|. +|++.|.+++.|.+|+++|.
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            34555 666666666 666666666   6666666 66666666666666665443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.99  E-value=2.5e-10  Score=89.40  Aligned_cols=54  Identities=24%  Similarity=0.538  Sum_probs=48.7

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      +++.+ |.+|++.|.....|+.|++    +++|+|.+|++.|.+.+.|.+|+++|++++
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            45666 9999999999999999998    899999999999999999999999988765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.99  E-value=3.8e-10  Score=89.61  Aligned_cols=66  Identities=18%  Similarity=0.202  Sum_probs=59.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccccccC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKVD  110 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~ak~~  110 (405)
                      +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|++.|.+++..+.....
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   71 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP------------YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICP   71 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS------------EECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSS
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCC------------EeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCC
Confidence            7899999999999999999999998887765            99999999999999999999999988877665543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.98  E-value=3.1e-10  Score=86.04  Aligned_cols=51  Identities=25%  Similarity=0.641  Sum_probs=46.7

Q ss_pred             CCCccc-cc--ccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhh
Q 015552            8 VSSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus         8 ~geKp~-C~--~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      .+++.| |.  .|++.|..+..|.+|++    +++|+|.+|++.|.+++.|.+|+++|
T Consensus        15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           15 PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            367777 97  59999999999999999    89999999999999999999999776

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.98  E-value=2.1e-10  Score=90.47  Aligned_cols=56  Identities=20%  Similarity=0.326  Sum_probs=52.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      ||+|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|...+.|..|++.|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP------------FACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC------------EECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCCCCCccCCHHHHHHHHHHhCC
Confidence            6899999999999999999999999888765            9999999999999999999999874

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.97  E-value=1.9e-09  Score=85.49  Aligned_cols=53  Identities=21%  Similarity=0.218  Sum_probs=48.8

Q ss_pred             ccccCcccCChhHHHHHhh-----cCc--------ccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           14 CYYCDREFDDEKILVQHQK-----AKH--------FKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        14 C~~CgK~F~~ks~Lk~H~R-----EKP--------fkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..|++.|.....|.+|++     +++        |+|.+|++.|.++..|.+|+++|+++++|.|
T Consensus        28 C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             CCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             ccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            8999999999999999987     556        9999999999999999999999999988555

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.7e-11  Score=91.21  Aligned_cols=54  Identities=15%  Similarity=0.247  Sum_probs=48.6

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      ..+++.+ |.+|++.|.....|.+   +++|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        13 h~~~~~~~C~~C~k~f~~~~~l~~---~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A           13 HLGDRSQKCSKCGIIFIRRSTLSR---RKTPMCEKCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             CCCCSEEECSSSCCEEECCCCCCC---SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             hCCCCCeeCCcccchhCCHHHhCc---CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC
Confidence            3467888 9999999999998877   8899999999999999999999999888876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.96  E-value=2.3e-10  Score=96.28  Aligned_cols=53  Identities=25%  Similarity=0.438  Sum_probs=49.9

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh--cCcccccccccCCCChhhHHHHhhhhccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R--EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      ++|.| |.+|++.|.....|++|++  +++|+|.+|++.|.++++|.+|+++||+.
T Consensus        71 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           71 AISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            46777 9999999999999999999  89999999999999999999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.95  E-value=3.9e-10  Score=86.60  Aligned_cols=52  Identities=25%  Similarity=0.597  Sum_probs=47.6

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      +++.+ |.+|++.|..+..|.+|++    +++|+|.+|++.|.+++.|.+|+++|++
T Consensus        26 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           26 DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            45666 9999999999999999999    8999999999999999999999988764

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.2e-10  Score=85.96  Aligned_cols=56  Identities=14%  Similarity=0.229  Sum_probs=50.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccc-cCCCCCCChHHHHHHHhhhcCCC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE-IYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~-iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      +|+|+|.+|++.|. ..+|.+|+++ +++++            |.|. +|++.|...+.|.+|+++|....
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p------------~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP------------VACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSE------------EECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcC------------ccCCcccCcccccHHHHHHHHHhhcccC
Confidence            78999999999999 9999999987 77765            8999 99999999999999999987653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.91  E-value=8.3e-10  Score=87.45  Aligned_cols=66  Identities=15%  Similarity=0.223  Sum_probs=57.9

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCC--CcccccccC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE--VPSKMAKVD  110 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e--~~~k~ak~~  110 (405)
                      +++|+|.+|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|..|++.|+++  +..+.....
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~   72 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKP------------YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCG   72 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCS------------EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSC
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCC------------CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCcc
Confidence            6899999999999999999999998887765            89999999999999999999999886  556554443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.90  E-value=1.1e-09  Score=82.98  Aligned_cols=43  Identities=21%  Similarity=0.570  Sum_probs=23.0

Q ss_pred             ccc--cCcccCChhHHHHHhh----cCcccccc--cccCCCChhhHHHHhh
Q 015552           14 CYY--CDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVL   56 (405)
Q Consensus        14 C~~--CgK~F~~ks~Lk~H~R----EKPfkC~~--CgKsFs~~s~L~rH~r   56 (405)
                      |.+  |++.|.....|++|++    +++|+|.+  |++.|.++..|.+|++
T Consensus        20 C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           20 CSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             CCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            555  5555555555555555    45555543  5555555555555543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.89  E-value=1.3e-09  Score=83.57  Aligned_cols=65  Identities=12%  Similarity=0.041  Sum_probs=56.4

Q ss_pred             cCcccccc--cccCCCChhhHHHHhh-hhccccccccCCCCCCCCcccccc--CCCCCCChHHHHHHHhhhcCCCccccc
Q 015552           33 AKHFKCHV--CHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEEEVPSKMA  107 (405)
Q Consensus        33 EKPfkC~~--CgKsFs~~s~L~rH~r-~hH~ekp~~cp~~kpgRk~~~C~i--Cgk~F~~~s~L~~H~r~h~~e~~~k~a  107 (405)
                      +++|.|..  |++.|.+..+|.+|++ .|.++++            |.|.+  |++.|.....|.+|+++|++++..+..
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~------------~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   72 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS------------FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   72 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC------------EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC------------eECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC
Confidence            68899997  9999999999999998 4666654            88988  999999999999999999998877654


Q ss_pred             cc
Q 015552          108 KV  109 (405)
Q Consensus       108 k~  109 (405)
                      ..
T Consensus        73 ~C   74 (79)
T 2dlk_A           73 FS   74 (79)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.88  E-value=8.6e-10  Score=90.03  Aligned_cols=68  Identities=13%  Similarity=0.098  Sum_probs=59.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAKV  109 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~ak~  109 (405)
                      |..+|+|+| .|++.|.+...|.+|++.|+++++            |.|.+|++.|.....|.+|++.|.+++.++....
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   71 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP------------YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNIC   71 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS------------EECTTTSCEESSSHHHHHHHTTTCCCCCEECSSS
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcC------------ccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCC
Confidence            344899999 999999999999999998887765            9999999999999999999999998877766544


Q ss_pred             C
Q 015552          110 D  110 (405)
Q Consensus       110 ~  110 (405)
                      .
T Consensus        72 ~   72 (110)
T 2csh_A           72 A   72 (110)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.87  E-value=1.4e-09  Score=88.56  Aligned_cols=56  Identities=18%  Similarity=0.410  Sum_probs=48.8

Q ss_pred             ccc-ccccCcccCChhHHHHHhh---cCcccccccccCCCChhhHHHHhh-hhcccccccc
Q 015552           11 KVW-CYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKV   66 (405)
Q Consensus        11 Kp~-C~~CgK~F~~ks~Lk~H~R---EKPfkC~~CgKsFs~~s~L~rH~r-~hH~ekp~~c   66 (405)
                      +.+ |.+|++.|.....|++|++   +++|+|.+|++.|.++..|.+|++ .|.+++++.+
T Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           41 NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            455 9999999999999999998   899999999999999999999997 5555665443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.7e-10  Score=95.06  Aligned_cols=78  Identities=14%  Similarity=0.101  Sum_probs=63.2

Q ss_pred             hhHHHHHhh----cCcccccccccCCCChhhHHHHhhh--hccccccccCCCCCCCCccccccCCCCC--CChHHHHHHH
Q 015552           24 EKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQ--VHKENVTKVPNAKPGRESTDIEIYGMQG--IPPDVLAAHY   95 (405)
Q Consensus        24 ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~--hH~ekp~~cp~~kpgRk~~~C~iCgk~F--~~~s~L~~H~   95 (405)
                      .+.|++|++    +|+|+|.+|++.|.+...|.+|++.  |++++.           .+.|.+|++.|  .....|..|+
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~-----------~~~C~~C~~~f~f~~~~~l~~H~   72 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDN-----------HETDNNNPKRWSKPRKRSLLEME   72 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSC-----------CCCCCCCCSCCSSCCCCCCCCCC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCC-----------CccCCCCCcccccccHHHHHHHh
Confidence            345667777    8999999999999999999999987  433331           15599999999  8999999999


Q ss_pred             hhhcCCCcccccccCCC
Q 015552           96 GEEEEEVPSKMAKVDTS  112 (405)
Q Consensus        96 r~h~~e~~~k~ak~~~p  112 (405)
                      +.|.+++.++.......
T Consensus        73 ~~H~~~~~~~C~~C~k~   89 (115)
T 2dmi_A           73 GKEDAQKVLKCMYCGHS   89 (115)
T ss_dssp             CSCCCCSSCBCSSSCCB
T ss_pred             hccCCCcceECCCCCCc
Confidence            99999888876655443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.84  E-value=1.2e-09  Score=82.72  Aligned_cols=54  Identities=15%  Similarity=0.125  Sum_probs=49.3

Q ss_pred             cCcccccc--cccCCCChhhHHHHhhhhccccccccCCCCCCCCccccc--cCCCCCCChHHHHHHHhhh
Q 015552           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEE   98 (405)
Q Consensus        33 EKPfkC~~--CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~--iCgk~F~~~s~L~~H~r~h   98 (405)
                      ++.|.|.+  |++.|.+...|.+|++.|+++++            |.|.  .|++.|...+.|.+|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP------------FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS------------EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCC------------ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            78999999  99999999999999999888876            8885  4999999999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.77  E-value=5e-09  Score=83.51  Aligned_cols=52  Identities=31%  Similarity=0.669  Sum_probs=47.1

Q ss_pred             CCccc-cc--ccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcc
Q 015552            9 SSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus         9 geKp~-C~--~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      +++.+ |.  .|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|++
T Consensus        42 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           42 GEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            56667 96  59999999999999999    8999999999999999999999988753

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=6.9e-09  Score=74.81  Aligned_cols=43  Identities=16%  Similarity=0.274  Sum_probs=29.7

Q ss_pred             cCcccccccccCCCChhhHHHHhh-hhccccccccCCCCCCCCccccccCCCCCCC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIEIYGMQGIP   87 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r-~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~   87 (405)
                      +|+|+|.+|++.|.+...|.+|++ .|+++++            |.|.+|++.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~------------~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERP------------HKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCC------------CCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCC------------ccCCCCCCCCCC
Confidence            677777777777777777777765 4555543            677777777753

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=1.3e-08  Score=73.28  Aligned_cols=42  Identities=26%  Similarity=0.446  Sum_probs=37.4

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh-----cCcccccccccCCCCh
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTA   48 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R-----EKPfkC~~CgKsFs~~   48 (405)
                      ..+++.| |.+|++.|.+...|++|++     +|+|+|.+|++.|.++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            3467778 9999999999999999975     8999999999999863

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.67  E-value=9.1e-09  Score=79.22  Aligned_cols=54  Identities=13%  Similarity=0.188  Sum_probs=50.1

Q ss_pred             cccc--cccccCCCChhhHHHHhhhhccccccccCCCCCCCCcccccc--CCCCCCChHHHHHHHhhhcC
Q 015552           35 HFKC--HVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        35 PfkC--~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~i--Cgk~F~~~s~L~~H~r~h~~  100 (405)
                      +|+|  ..|++.|.....|.+|++.|+++++            |.|.+  |++.|.....|.+|++.|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP------------YECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC------------EECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC------------eeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6899  8899999999999999999888775            88988  99999999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=9.2e-09  Score=72.09  Aligned_cols=39  Identities=18%  Similarity=0.194  Sum_probs=29.4

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk   83 (405)
                      +|+|+|.+|++.|.+...|.+|+++|+++++            |.|.+|+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~------------~~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKP------------YSSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCC------------CCSCCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCC------------ccCCCCCC
Confidence            6778888888888888888888777776665            67777765

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=1.1e-08  Score=70.56  Aligned_cols=34  Identities=21%  Similarity=0.348  Sum_probs=28.7

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   38 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG   38 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCC
Confidence            4448889999999999999999999988887776

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.2e-08  Score=70.40  Aligned_cols=31  Identities=26%  Similarity=0.370  Sum_probs=27.8

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKP   40 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHhhhcCCCCC
Confidence            8899999999999999999999988888776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.61  E-value=1.4e-08  Score=70.09  Aligned_cols=31  Identities=26%  Similarity=0.404  Sum_probs=27.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2em0_A           10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKP   40 (46)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999988888776

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.61  E-value=5.1e-09  Score=75.38  Aligned_cols=44  Identities=9%  Similarity=0.166  Sum_probs=23.7

Q ss_pred             cccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           19 REFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        19 K~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |.|.....|..|++    +++|+|.+|++.|.+.++|.+|+++|++++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            44444444444444    555555555555555555555555555544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.61  E-value=1.3e-08  Score=70.42  Aligned_cols=32  Identities=22%  Similarity=0.343  Sum_probs=28.3

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emk_A            9 GEKPYECKECGKAFSQTTHLIQHQRVHTGEKP   40 (46)
T ss_dssp             SSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC
T ss_pred             CCCceECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            38899999999999999999999988888776

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.61  E-value=2.5e-08  Score=77.72  Aligned_cols=65  Identities=18%  Similarity=0.284  Sum_probs=57.1

Q ss_pred             cCcccccc--cccCCCChhhHHHHhhhhccccccccCCCCCCCCccccc--cCCCCCCChHHHHHHHhhhcCCCcccccc
Q 015552           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEEVPSKMAK  108 (405)
Q Consensus        33 EKPfkC~~--CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~--iCgk~F~~~s~L~~H~r~h~~e~~~k~ak  108 (405)
                      .+.|.|.+  |++.|.....|.+|++.|+++++            |.|.  +|++.|.....|.+|++.|.+++..+...
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   70 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP------------YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK   70 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC------------EECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC------------cCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence            56899999  99999999999999998887765            8886  69999999999999999999988776554


Q ss_pred             c
Q 015552          109 V  109 (405)
Q Consensus       109 ~  109 (405)
                      .
T Consensus        71 C   71 (89)
T 2wbs_A           71 C   71 (89)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=2e-08  Score=69.47  Aligned_cols=34  Identities=21%  Similarity=0.301  Sum_probs=28.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2elz_A            7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT   40 (46)
T ss_dssp             CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC
T ss_pred             CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCC
Confidence            3338899999999999999999999988888776

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.4e-08  Score=70.31  Aligned_cols=34  Identities=24%  Similarity=0.451  Sum_probs=29.3

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP   40 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            4348999999999999999999999988888776

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.4e-08  Score=69.97  Aligned_cols=32  Identities=25%  Similarity=0.331  Sum_probs=28.1

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eq4_A            9 GEKLYNCKECGKSFSRAPCLLKHERLHSGEKP   40 (46)
T ss_dssp             CCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC
T ss_pred             CCCCeECCCCCCccCchHHHHHHHHhcCCCCC
Confidence            38899999999999999999999988888776

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.5e-08  Score=69.85  Aligned_cols=32  Identities=25%  Similarity=0.361  Sum_probs=28.0

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eop_A            9 GEKPHECRECGKSFSFNSQLIVHQRIHTGENP   40 (46)
T ss_dssp             CCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC
T ss_pred             CCCCeeCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            38899999999999999999999988888776

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.8e-08  Score=69.58  Aligned_cols=34  Identities=26%  Similarity=0.311  Sum_probs=28.9

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++.+|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2epz_A            7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP   40 (46)
T ss_dssp             CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCC
Confidence            3348899999999999999999999988888776

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.60  E-value=1.2e-08  Score=70.41  Aligned_cols=34  Identities=24%  Similarity=0.362  Sum_probs=29.1

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ema_A            7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP   40 (46)
T ss_dssp             CTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCC
T ss_pred             CCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC
Confidence            3338899999999999999999999988888876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.7e-08  Score=69.61  Aligned_cols=32  Identities=28%  Similarity=0.413  Sum_probs=28.1

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytr_A            9 GEKPYKCNECGKAFSQTSKLARHQRIHTGEKP   40 (46)
T ss_dssp             SCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            38899999999999999999999988887776

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.7e-08  Score=69.67  Aligned_cols=32  Identities=25%  Similarity=0.477  Sum_probs=28.4

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+++|+|.+|++.|.++++|.+|+++|+++++
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoq_A            9 GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP   40 (46)
T ss_dssp             SSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS
T ss_pred             CCCCcCCCcCCchhCCHHHHHHHHHHcCCCCC
Confidence            38899999999999999999999988888876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.4e-08  Score=70.06  Aligned_cols=31  Identities=23%  Similarity=0.340  Sum_probs=27.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.+++.|.+|++.|+++++
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2eoe_A           10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKP   40 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHGGGSCCCS
T ss_pred             CCCeECCCcChhhCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999988888776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.59  E-value=1.9e-08  Score=69.54  Aligned_cols=34  Identities=26%  Similarity=0.384  Sum_probs=29.1

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP   40 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC
Confidence            3348899999999999999999999988888776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.7e-08  Score=69.55  Aligned_cols=31  Identities=26%  Similarity=0.387  Sum_probs=27.6

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eov_A           10 EKPYKCSDCGKSFTWKSRLRIHQKCHTGERH   40 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS
T ss_pred             CCCccCCccChhhCCHHHHHHHHHhcCCCCC
Confidence            8899999999999999999999988888776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.2e-08  Score=70.44  Aligned_cols=34  Identities=29%  Similarity=0.432  Sum_probs=28.5

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|++.|+++++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eq0_A            7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP   40 (46)
T ss_dssp             TTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            3338899999999999999999999888887776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=2.2e-08  Score=69.26  Aligned_cols=34  Identities=24%  Similarity=0.375  Sum_probs=28.7

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytq_A            7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP   40 (46)
T ss_dssp             SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS
T ss_pred             cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC
Confidence            3348899999999999999999999988888776

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.58  E-value=1.4e-08  Score=70.07  Aligned_cols=31  Identities=19%  Similarity=0.358  Sum_probs=27.4

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2el4_A           10 VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP   40 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHGGGSSSCCC
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            8889999999999999999999888888776

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.5e-08  Score=70.06  Aligned_cols=31  Identities=23%  Similarity=0.463  Sum_probs=27.6

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eml_A           10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCCC
T ss_pred             CCCeeCCCcCCccCCHHHHHHHHHHhcCCCC
Confidence            8899999999999999999999988888776

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.3e-08  Score=70.30  Aligned_cols=31  Identities=23%  Similarity=0.370  Sum_probs=27.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emy_A           10 ENPYECHECGKAFSRKYQLISHQRTHAGEKP   40 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHHTTSCC
T ss_pred             CcCcCCCCCCcccCcHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999988888776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.2e-08  Score=70.42  Aligned_cols=34  Identities=18%  Similarity=0.324  Sum_probs=28.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emh_A            7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP   40 (46)
T ss_dssp             CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            3338899999999999999999999988888776

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.3e-08  Score=70.28  Aligned_cols=32  Identities=22%  Similarity=0.345  Sum_probs=28.1

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.++++|.+|++.|+++++
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytk_A            9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP   40 (46)
T ss_dssp             SSCSEECSSSCCEESSHHHHHHHHHHHSSSSC
T ss_pred             CCCCEeCCcCCCccCCHHHHHHHHHHHCCCCC
Confidence            38899999999999999999999988888776

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=9.7e-09  Score=71.09  Aligned_cols=31  Identities=16%  Similarity=0.446  Sum_probs=27.4

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.+.++|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoo_A           10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKS   40 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHSTTS
T ss_pred             CCCEEccccCcccCCHHHHHHHHHHHcCCCC
Confidence            8889999999999999999999888888776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.5e-08  Score=70.01  Aligned_cols=34  Identities=18%  Similarity=0.290  Sum_probs=29.0

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP   40 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC
Confidence            3338899999999999999999999988888776

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=3.2e-10  Score=85.21  Aligned_cols=64  Identities=16%  Similarity=0.124  Sum_probs=54.1

Q ss_pred             hhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhc
Q 015552           24 EKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        24 ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      +..|.+|++    +++|+|.+|++.|.+...|.+       +++            |.|.+|++.|.....|.+|++.|.
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~------------~~C~~C~~~f~~~~~l~~H~~~H~   63 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKT------------PMCEKCRKDSCQEAALNKDEGNES   63 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSS------------CCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCC------------CCCCCCChhhcCHHHHHHHHHhhc
Confidence            345667777    899999999999999998876       332            999999999999999999999999


Q ss_pred             CCCcccc
Q 015552          100 EEVPSKM  106 (405)
Q Consensus       100 ~e~~~k~  106 (405)
                      +++..+.
T Consensus        64 ~~~~~~C   70 (73)
T 2ctu_A           64 GKKTSGP   70 (73)
T ss_dssp             CCCCSSC
T ss_pred             CCCCCCC
Confidence            8876543

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.4e-08  Score=69.98  Aligned_cols=31  Identities=19%  Similarity=0.313  Sum_probs=27.2

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emm_A           10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHSCCCT
T ss_pred             CCCeeCCCCChhhCCHHHHHHHHHHhCCCCC
Confidence            8889999999999999999999888887776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.3e-08  Score=69.30  Aligned_cols=34  Identities=18%  Similarity=0.269  Sum_probs=28.8

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP   40 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            3348899999999999999999999988888776

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=1.8e-08  Score=68.90  Aligned_cols=34  Identities=24%  Similarity=0.425  Sum_probs=28.2

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP   38 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCS
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            3337889999999999999999999888887776

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=2.1e-08  Score=69.27  Aligned_cols=34  Identities=21%  Similarity=0.323  Sum_probs=28.5

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2em7_A            7 GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP   40 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCC
T ss_pred             CCCCcCccCCCccchhCCHHHHHHHHHHhCCCCC
Confidence            3338889999999999999999999888887776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.56  E-value=1.8e-08  Score=69.50  Aligned_cols=34  Identities=21%  Similarity=0.274  Sum_probs=28.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em9_A            7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP   40 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC
T ss_pred             CCCCcCeECCccccccCChHHHHHHHHHhCCCCC
Confidence            3338899999999999999999999888887776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.3e-08  Score=70.11  Aligned_cols=34  Identities=18%  Similarity=0.285  Sum_probs=28.8

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eme_A            7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP   40 (46)
T ss_dssp             TCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC
Confidence            3338899999999999999999999988887776

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.6e-08  Score=69.91  Aligned_cols=31  Identities=23%  Similarity=0.418  Sum_probs=27.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emp_A           10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHHHHHCCSC
T ss_pred             CcCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            8889999999999999999999888888776

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.7e-08  Score=69.75  Aligned_cols=31  Identities=19%  Similarity=0.475  Sum_probs=27.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.++++|.+|++.|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep2_A           10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTTSSCCS
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            8899999999999999999999988888776

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.5e-08  Score=69.99  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=27.2

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2yu8_A           10 EKPYKCNECGKVFTQNSHLARHRRVHTGGKP   40 (46)
T ss_dssp             CSSEECSSSCCEESSSHHHHHHTHHHHSCCC
T ss_pred             CCCeECCcCCchhCCHHHHHHHHHhcCCCCC
Confidence            8889999999999999999999888888776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.1e-08  Score=69.28  Aligned_cols=32  Identities=22%  Similarity=0.318  Sum_probs=27.7

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ene_A            9 GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP   40 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CCCCeECCCCCchhCChHHHHHHHhhcCCCCC
Confidence            38899999999999999999999888887776

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=1.8e-08  Score=69.69  Aligned_cols=31  Identities=19%  Similarity=0.359  Sum_probs=27.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +++|+|.+|++.|.++++|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em5_A           10 TKSHQCHECGRGFTLKSHLNQHQRIHTGEKP   40 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHTTTSCSCC
T ss_pred             CCCeECCcCCCccCCHHHHHHHHHHhCCCCC
Confidence            8889999999999999999999888887776

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.9e-08  Score=69.49  Aligned_cols=35  Identities=17%  Similarity=0.310  Sum_probs=29.3

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      .+|+|+|.+|++.|.++++|.+|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ep3_A            9 GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            38899999999999999999999988888876333

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=1.9e-08  Score=69.35  Aligned_cols=31  Identities=23%  Similarity=0.371  Sum_probs=27.2

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.+.+.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en8_A           10 EKSHTCDECGKNFCYISALRIHQRVHMGEKC   40 (46)
T ss_dssp             CSSEECTTTCCEESSHHHHHHHHTTTCCSCS
T ss_pred             CCCeECCCcCcccCCHHHHHHHHHHhCCCCC
Confidence            8889999999999999999999888887776

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=1.6e-08  Score=69.80  Aligned_cols=31  Identities=26%  Similarity=0.335  Sum_probs=27.8

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytg_A           10 EKPFKCGECGKSYNQRVHLTQHQRVHTGEKP   40 (46)
T ss_dssp             CCSEECTTTCCEESSSHHHHTTGGGGSSCCS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            8899999999999999999999988888776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=1.9e-08  Score=69.46  Aligned_cols=32  Identities=19%  Similarity=0.231  Sum_probs=27.6

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytd_A            9 GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP   40 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHHTCCCS
T ss_pred             CCcCeECCCCCCeeCChHHHHHHHHHcCCCCC
Confidence            38889999999999999999999888888776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=1.8e-08  Score=69.44  Aligned_cols=31  Identities=19%  Similarity=0.314  Sum_probs=27.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.+++.|.+|++.|+++++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2epw_A           10 EKPCKCTECGKAFCWKSQLIMHQRTHVDDKH   40 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHCCSCCC
T ss_pred             CCCeeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            8889999999999999999999888887776

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.54  E-value=2.2e-08  Score=69.25  Aligned_cols=31  Identities=23%  Similarity=0.425  Sum_probs=26.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +|+|+|.+|++.|.++.+|.+|+++|+++++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2el6_A           10 VNPYKCSQCEKSFSGKLRLLVHQRMHTREKP   40 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            7888999999999999999999888887776

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=2.7e-08  Score=68.71  Aligned_cols=32  Identities=28%  Similarity=0.335  Sum_probs=27.2

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.+++.|.+|++.|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2enc_A            9 GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP   40 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHSCCSSC
T ss_pred             CCCCcCCCCCCCcCCChHHHHHHHHHhCCCCC
Confidence            37889999999999999999999888877776

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.4e-08  Score=68.96  Aligned_cols=32  Identities=25%  Similarity=0.418  Sum_probs=27.9

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.++++|.+|++.|+++++
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2en1_A            9 GEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP   40 (46)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGGSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            38899999999999999999999988887776

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=4.2e-08  Score=67.80  Aligned_cols=38  Identities=18%  Similarity=0.314  Sum_probs=32.1

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++|+|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            43489999999999999999999999988888876554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.4e-08  Score=68.92  Aligned_cols=34  Identities=21%  Similarity=0.316  Sum_probs=28.2

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ysp_A            7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP   40 (46)
T ss_dssp             CSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            3338889999999999999999999888887776

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.8e-08  Score=68.71  Aligned_cols=32  Identities=22%  Similarity=0.326  Sum_probs=26.9

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.++.+|.+|+++|+++++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em8_A            9 GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL   40 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHHHHHCCCC
T ss_pred             CCCCeECcccCchhCCHHHHHHHHHHHcCCCC
Confidence            37888888888888888888888888887776

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.1e-08  Score=69.25  Aligned_cols=34  Identities=21%  Similarity=0.318  Sum_probs=28.0

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en6_A            7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP   40 (46)
T ss_dssp             CCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHHHcCCCCC
Confidence            3338889999999999999999999888887776

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=4e-08  Score=67.78  Aligned_cols=35  Identities=20%  Similarity=0.301  Sum_probs=30.5

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A           10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            89999999999999999999999888888875553

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=4.7e-08  Score=67.53  Aligned_cols=35  Identities=20%  Similarity=0.363  Sum_probs=30.5

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A           10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            89999999999999999999999888888875553

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=4.7e-08  Score=67.50  Aligned_cols=34  Identities=18%  Similarity=0.230  Sum_probs=29.1

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhh-hhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVL-QVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r-~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.+++.|.+|++ .|+++++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~   41 (47)
T 2epx_A            7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP   41 (47)
T ss_dssp             CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS
T ss_pred             cCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC
Confidence            333899999999999999999999998 7777776

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=4.8e-08  Score=67.39  Aligned_cols=38  Identities=21%  Similarity=0.320  Sum_probs=31.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            33389999999999999999999999888888875553

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.50  E-value=3.6e-08  Score=66.57  Aligned_cols=37  Identities=14%  Similarity=0.250  Sum_probs=30.9

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|++++++.|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            3348899999999999999999999988888887555

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.9e-08  Score=67.87  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=27.3

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.++.+|.+|++.|+++++
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP   40 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC
Confidence            3347888888888888888888888888777776

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.4e-08  Score=68.14  Aligned_cols=34  Identities=12%  Similarity=0.191  Sum_probs=27.9

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yso_A            7 GSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN   40 (46)
T ss_dssp             SSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC
T ss_pred             cCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC
Confidence            3337889999999999999999999888887776

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=4.6e-08  Score=67.47  Aligned_cols=35  Identities=23%  Similarity=0.322  Sum_probs=30.4

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            89999999999999999999999888888875553

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.3e-08  Score=68.36  Aligned_cols=38  Identities=16%  Similarity=0.350  Sum_probs=31.8

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++|.|+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            33389999999999999999999999988888875554

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=4.9e-08  Score=65.79  Aligned_cols=37  Identities=14%  Similarity=0.255  Sum_probs=30.5

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|++++++.|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3338899999999999999999999988888877544

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=4.6e-08  Score=67.36  Aligned_cols=36  Identities=19%  Similarity=0.326  Sum_probs=30.8

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      .+|+|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            9 GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             SCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            388999999999999999999999888888875553

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.49  E-value=3.4e-08  Score=70.94  Aligned_cols=51  Identities=14%  Similarity=0.008  Sum_probs=46.0

Q ss_pred             ccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcc
Q 015552           42 HKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (405)
Q Consensus        42 gKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~  104 (405)
                      +|.|.+...|..|++.|.++++            |.|.+|++.|...+.|..|+++|.+++++
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQP------------ATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCC------------EECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCC------------ccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            5789999999999999888775            99999999999999999999999987653

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=4.2e-08  Score=66.78  Aligned_cols=34  Identities=21%  Similarity=0.341  Sum_probs=29.2

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      +|+|+|.+|++.|.+++.|.+|+++|++++++.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A           10 MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            8899999999999999999999988888877544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=5.6e-08  Score=67.26  Aligned_cols=38  Identities=21%  Similarity=0.335  Sum_probs=32.1

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.++..|.+|+++|+++++|.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            44489999999999999999999999988888875553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=8.3e-08  Score=67.11  Aligned_cols=37  Identities=22%  Similarity=0.308  Sum_probs=33.6

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHK   43 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgK   43 (405)
                      ..+++.| |.+|++.|.+...|++|++    +|+|+|.+|+|
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3467777 9999999999999999999    89999999986

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.9e-08  Score=67.94  Aligned_cols=37  Identities=24%  Similarity=0.304  Sum_probs=29.7

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3338889999999999999999999888888776333

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=5.1e-08  Score=67.36  Aligned_cols=36  Identities=25%  Similarity=0.410  Sum_probs=30.7

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      .+|+|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            9 GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            389999999999999999999999888888875553

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=6.2e-08  Score=66.93  Aligned_cols=33  Identities=21%  Similarity=0.425  Sum_probs=27.0

Q ss_pred             hhcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           31 QKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        31 ~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      ..+|+|+|.+|++.|.++.+|.+|+++|+++++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytt_A            8 EGEKPYQCSECGKSFSGSYRLTQHWITHTREKP   40 (46)
T ss_dssp             SCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC
T ss_pred             CCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            337888888888888888888888888887776

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=4.8e-08  Score=67.51  Aligned_cols=38  Identities=16%  Similarity=0.279  Sum_probs=31.9

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++|+|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             cCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            33389999999999999999999999988888875554

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.47  E-value=4.1e-08  Score=67.86  Aligned_cols=36  Identities=25%  Similarity=0.360  Sum_probs=30.7

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      .+|+|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            9 GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            389999999999999999999999888888875553

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=5.8e-08  Score=66.94  Aligned_cols=37  Identities=19%  Similarity=0.263  Sum_probs=31.1

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|+++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3338899999999999999999999988888887554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=3.5e-08  Score=68.24  Aligned_cols=38  Identities=18%  Similarity=0.374  Sum_probs=31.8

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++|.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33389999999999999999999999988888875553

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=4.4e-08  Score=66.00  Aligned_cols=34  Identities=21%  Similarity=0.473  Sum_probs=28.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      +|+|+|.+|++.|.++++|.+|+++|++++++.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            8889999999999999999999888888876443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=4.1e-08  Score=67.85  Aligned_cols=35  Identities=26%  Similarity=0.460  Sum_probs=30.5

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      +|+|+|.+|++.|.+++.|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A           10 EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            88999999999999999999999888888875553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=5.2e-08  Score=67.21  Aligned_cols=35  Identities=20%  Similarity=0.386  Sum_probs=30.4

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      .+|+|+|.+|++.|.++..|.+|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            9 GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            38999999999999999999999988888887554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=4.3e-08  Score=67.50  Aligned_cols=36  Identities=22%  Similarity=0.422  Sum_probs=30.7

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      .+|+|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            9 GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            388999999999999999999999888888875553

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=4.9e-08  Score=67.22  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=30.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A           10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            88999999999999999999999888888875553

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=7.5e-08  Score=66.50  Aligned_cols=38  Identities=21%  Similarity=0.358  Sum_probs=32.0

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.++.+|.+|+++|+++++|.|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33489999999999999999999999988888875553

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=4.7e-08  Score=67.44  Aligned_cols=38  Identities=21%  Similarity=0.366  Sum_probs=31.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+++|+|.+|++.|.++++|.+|+++|+++++|.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            33389999999999999999999999998888875553

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=5.5e-08  Score=67.07  Aligned_cols=38  Identities=16%  Similarity=0.350  Sum_probs=31.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|++++++.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             cCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            33389999999999999999999999988888875553

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.7e-08  Score=67.30  Aligned_cols=35  Identities=26%  Similarity=0.453  Sum_probs=30.1

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      +|+|+|.+|++.|.+++.|.+|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A           10 EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            88999999999999999999999888888875553

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.6e-08  Score=66.57  Aligned_cols=34  Identities=21%  Similarity=0.442  Sum_probs=29.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      +++|+|.+|++.|.+.++|.+|+++|++++++.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A           10 EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999988888877544

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=5.5e-08  Score=67.20  Aligned_cols=35  Identities=23%  Similarity=0.396  Sum_probs=30.4

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      .+|+|+|.+|++.|.+.++|.+|+++|+++++|.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            9 GERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            38999999999999999999999998888887555

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=7e-08  Score=65.23  Aligned_cols=35  Identities=11%  Similarity=0.283  Sum_probs=28.9

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      .+|+|+|.+|++.|.+++.|.+|+++|+++++++|
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            37889999999999999999999888888776443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=4.4e-08  Score=67.59  Aligned_cols=35  Identities=17%  Similarity=0.336  Sum_probs=30.8

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      +|+|+|.+|++.|.++++|.+|+++|+++++++|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A           10 EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            89999999999999999999999888888876654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=4.4e-08  Score=66.94  Aligned_cols=34  Identities=15%  Similarity=0.320  Sum_probs=29.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      +|+|+|.+|++.|.++.+|.+|++.|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A           10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            8899999999999999999999988888877544

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=6.4e-08  Score=66.85  Aligned_cols=38  Identities=21%  Similarity=0.397  Sum_probs=31.4

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.++..|.+|+++|+++++|.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            33388999999999999999999999888888875553

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=5.4e-08  Score=66.36  Aligned_cols=37  Identities=14%  Similarity=0.225  Sum_probs=30.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|++++++.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            3338899999999999999999999988888877544

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=5e-08  Score=67.18  Aligned_cols=34  Identities=18%  Similarity=0.338  Sum_probs=29.9

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      +|+|+|.+|++.|.++.+|.+|+++|+++++|.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            8899999999999999999999988888887554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=6.6e-08  Score=66.55  Aligned_cols=38  Identities=16%  Similarity=0.229  Sum_probs=31.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      |..+|+|+|.+|++.|.+++.|.+|+++|+++++|.|+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            33389999999999999999999999988888875553

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=6.6e-08  Score=66.54  Aligned_cols=36  Identities=17%  Similarity=0.333  Sum_probs=30.8

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccccccC
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp   67 (405)
                      .+|+|+|.+|++.|.+++.|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            9 GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            388999999999999999999999888888875553

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=7.3e-08  Score=65.82  Aligned_cols=34  Identities=12%  Similarity=0.269  Sum_probs=29.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      +|+|+|.+|++.|.+.++|.+|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A           10 RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            8899999999999999999999988888877544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.41  E-value=7.4e-08  Score=64.87  Aligned_cols=35  Identities=17%  Similarity=0.401  Sum_probs=28.7

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      .+|+|+|.+|++.|.++++|.+|+++|++++++.|
T Consensus         8 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            37889999999999999999999888888776443

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=6.7e-08  Score=65.21  Aligned_cols=35  Identities=20%  Similarity=0.386  Sum_probs=28.7

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      .+|+|+|.+|++.|.+.+.|.+|+++|++++++.|
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            8 GEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            37889999999999999999999888888776443

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.1e-07  Score=64.93  Aligned_cols=35  Identities=14%  Similarity=0.150  Sum_probs=29.5

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      .+++|+|.+|++.|.+..+|.+|+++|+++++|.|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            9 AKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            38889999999999999999999988888877544

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=2.6e-07  Score=63.76  Aligned_cols=39  Identities=18%  Similarity=0.242  Sum_probs=34.1

Q ss_pred             CCCCCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            3 KKKKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         3 kKkrr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+...+++.| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34445578888 9999999999999999999    899999988

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.9e-07  Score=64.50  Aligned_cols=37  Identities=16%  Similarity=0.188  Sum_probs=30.8

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.++.+|.+|+++|+++++|+|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            3348899999999999999999999988888887544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=1.2e-07  Score=64.92  Aligned_cols=34  Identities=15%  Similarity=0.221  Sum_probs=28.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      +|+|+|.+|++.|.+.+.|.+|+++|++++++.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A           10 EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            8889999999999999999999888888776443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.37  E-value=2e-07  Score=63.56  Aligned_cols=37  Identities=22%  Similarity=0.421  Sum_probs=30.8

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.++++|.+|+++|++++++.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            4447899999999999999999999988888887444

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.2e-07  Score=65.11  Aligned_cols=37  Identities=22%  Similarity=0.354  Sum_probs=30.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.++.+|.+|+++|+++++|.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            3348899999999999999999999988888887555

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.36  E-value=6.7e-09  Score=77.33  Aligned_cols=20  Identities=25%  Similarity=0.566  Sum_probs=10.1

Q ss_pred             cCcccccccccCCCChhhHH
Q 015552           33 AKHFKCHVCHKKLSTAGGMA   52 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~   52 (405)
                      +++|+|.+|++.|.+.+.|.
T Consensus        12 ~k~~~C~~C~k~F~~~~~l~   31 (62)
T 1vd4_A           12 RASFKCPVCSSTFTDLEANQ   31 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH
T ss_pred             CCCccCCCCCchhccHHHhH
Confidence            45555555555555544443

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.2e-07  Score=65.49  Aligned_cols=37  Identities=27%  Similarity=0.358  Sum_probs=31.0

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcc-cccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK-ENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~-ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.++.+|.+|+++|++ +++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            3338999999999999999999999988888 777444

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=7e-08  Score=65.91  Aligned_cols=35  Identities=14%  Similarity=0.287  Sum_probs=30.0

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      .+++|+|.+|++.|.+..+|.+|+++|+++++|.|
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            9 DSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            38899999999999999999999988888877544

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.6e-07  Score=63.09  Aligned_cols=37  Identities=14%  Similarity=0.345  Sum_probs=29.3

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccccccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |..+|+|+|.+|++.|.+.++|.+|+++|+++++|.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3337888999999999999999999888888776443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=3.4e-07  Score=63.19  Aligned_cols=37  Identities=22%  Similarity=0.389  Sum_probs=32.8

Q ss_pred             CCCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         5 krr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      +...++|.| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            334477888 9999999999999999999    899999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=4e-07  Score=62.65  Aligned_cols=37  Identities=24%  Similarity=0.359  Sum_probs=33.0

Q ss_pred             CCCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         5 krr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      +...+++.+ |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444577888 9999999999999999999    899999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=3.1e-07  Score=63.04  Aligned_cols=34  Identities=15%  Similarity=0.260  Sum_probs=32.0

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCH   42 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~Cg   42 (405)
                      ++|.| |.+|++.|.++..|.+|++    +++|.|.+||
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            67778 9999999999999999999    9999999996

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=4.3e-07  Score=62.61  Aligned_cols=36  Identities=19%  Similarity=0.371  Sum_probs=32.4

Q ss_pred             CCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         6 rr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ...+++.| |.+|+|.|.+++.|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34477877 9999999999999999999    899999988

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.32  E-value=1.8e-07  Score=62.22  Aligned_cols=33  Identities=12%  Similarity=0.467  Sum_probs=28.3

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~   64 (405)
                      .+|+|+|.+|++.|.+.++|.+|+++|++++++
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            378899999999999999999999888887763

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=4.1e-07  Score=62.58  Aligned_cols=37  Identities=22%  Similarity=0.316  Sum_probs=32.9

Q ss_pred             CCCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         5 krr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      +...+++.| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344577888 9999999999999999999    899999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=4.4e-07  Score=62.51  Aligned_cols=35  Identities=23%  Similarity=0.265  Sum_probs=32.0

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3477878 9999999999999999999    899999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=4.2e-07  Score=62.65  Aligned_cols=37  Identities=19%  Similarity=0.239  Sum_probs=32.9

Q ss_pred             CCCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         5 krr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      +...+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            344577888 9999999999999999999    899999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=4.8e-07  Score=62.24  Aligned_cols=36  Identities=19%  Similarity=0.230  Sum_probs=32.3

Q ss_pred             CCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         6 rr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ...+++.| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34467888 9999999999999999999    899999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.30  E-value=4.9e-07  Score=62.27  Aligned_cols=36  Identities=22%  Similarity=0.329  Sum_probs=32.3

Q ss_pred             CCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         6 rr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ...+++.+ |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34477888 9999999999999999999    899999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=5.1e-07  Score=62.10  Aligned_cols=35  Identities=20%  Similarity=0.339  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|+|.|.+++.|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            3467878 9999999999999999999    899999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=4.4e-07  Score=62.40  Aligned_cols=36  Identities=19%  Similarity=0.295  Sum_probs=32.4

Q ss_pred             CCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         6 rr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ...+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            34477888 9999999999999999999    899999988

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=2.3e-07  Score=64.22  Aligned_cols=33  Identities=18%  Similarity=0.269  Sum_probs=26.2

Q ss_pred             hhcCccccc--ccccCCCChhhHHHHhhhhccccc
Q 015552           31 QKAKHFKCH--VCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        31 ~REKPfkC~--~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      ..+|+|+|.  +|++.|.++..|.+|+++|+++++
T Consensus         8 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   42 (48)
T 2ent_A            8 TGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP   42 (48)
T ss_dssp             CCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS
T ss_pred             CCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            337888887  788888888888888887777766

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.28  E-value=6e-07  Score=61.82  Aligned_cols=35  Identities=20%  Similarity=0.368  Sum_probs=32.0

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|+|.|.++..|.+|++    +|+|+|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3477888 9999999999999999999    899999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.28  E-value=5.8e-07  Score=61.79  Aligned_cols=35  Identities=29%  Similarity=0.435  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|++.|.+++.|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            3477888 9999999999999999999    899999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=5e-07  Score=62.16  Aligned_cols=35  Identities=23%  Similarity=0.320  Sum_probs=32.0

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3467888 9999999999999999999    999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.27  E-value=5.4e-07  Score=61.87  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=32.0

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|+|.|.+++.|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3477888 9999999999999999999    899999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=5.7e-07  Score=61.84  Aligned_cols=35  Identities=20%  Similarity=0.263  Sum_probs=32.0

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..++|.+ |.+|+|.|.+++.|.+|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3477888 9999999999999999999    899999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=5.8e-07  Score=61.69  Aligned_cols=35  Identities=20%  Similarity=0.430  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            7 GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3477888 9999999999999999999    899999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=6.1e-07  Score=61.81  Aligned_cols=35  Identities=26%  Similarity=0.373  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3477888 9999999999999999999    899999987

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.27  E-value=4.3e-07  Score=58.52  Aligned_cols=30  Identities=17%  Similarity=0.336  Sum_probs=26.3

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |+|+|.+|++.|.+.++|.+|+++|+++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            688999999999999999999988888775

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.27  E-value=6.4e-07  Score=61.48  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=32.0

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3477888 9999999999999999999    899999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=5.4e-07  Score=61.96  Aligned_cols=35  Identities=23%  Similarity=0.383  Sum_probs=32.0

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.+++.|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3477888 9999999999999999999    899999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=6.3e-07  Score=61.49  Aligned_cols=35  Identities=20%  Similarity=0.290  Sum_probs=31.8

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             cCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3467777 9999999999999999999    899999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=5.6e-07  Score=61.75  Aligned_cols=35  Identities=23%  Similarity=0.348  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3467888 9999999999999999999    899999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=5.5e-07  Score=61.33  Aligned_cols=34  Identities=24%  Similarity=0.448  Sum_probs=31.4

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      .+++.+ |.+|+|.|.+++.|++|++    +|+|+|.+|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            6 SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467778 9999999999999999999    899999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.26  E-value=6.1e-07  Score=61.81  Aligned_cols=35  Identities=26%  Similarity=0.434  Sum_probs=31.8

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|+|.|.+++.|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             cCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3467878 9999999999999999999    999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=6.1e-07  Score=61.68  Aligned_cols=36  Identities=22%  Similarity=0.213  Sum_probs=32.3

Q ss_pred             CCCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         6 rr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ...+++.| |.+|++.|.+++.|++|++    +|+|+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34477878 9999999999999999998    899999988

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=5.5e-08  Score=75.67  Aligned_cols=42  Identities=24%  Similarity=0.428  Sum_probs=18.9

Q ss_pred             ccccCcccCChhHHHHHhh---cCcccccccccCCCChhhHHHHhhh
Q 015552           14 CYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQ   57 (405)
Q Consensus        14 C~~CgK~F~~ks~Lk~H~R---EKPfkC~~CgKsFs~~s~L~rH~r~   57 (405)
                      |.+|++.|. ...|..|+.   ++++.|..|++.|. +..|.+|++.
T Consensus        20 C~~C~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A           20 CQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CSSSCCEEC-HHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             CcccChHhh-HHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHH
Confidence            444444442 444444444   44444444444443 2444444433

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=6e-07  Score=61.72  Aligned_cols=35  Identities=23%  Similarity=0.275  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|++.|.+++.|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3477888 9999999999999999998    999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.26  E-value=5.8e-07  Score=61.81  Aligned_cols=35  Identities=29%  Similarity=0.387  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|+|.|.++..|.+|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3467888 9999999999999999999    899999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=5.6e-07  Score=61.75  Aligned_cols=35  Identities=23%  Similarity=0.380  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.+++.|++|++    +|+|+|.+|
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3467878 9999999999999999999    899999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=5.9e-07  Score=61.75  Aligned_cols=35  Identities=23%  Similarity=0.385  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3467888 9999999999999999999    899999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=5.9e-07  Score=61.76  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3467888 9999999999999999998    899999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=5.5e-07  Score=61.93  Aligned_cols=35  Identities=20%  Similarity=0.380  Sum_probs=32.0

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3477888 9999999999999999998    899999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=5.5e-07  Score=61.91  Aligned_cols=35  Identities=26%  Similarity=0.434  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|++.|.+++.|++|++    +|+|+|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            3467888 9999999999999999999    999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=7.4e-07  Score=61.15  Aligned_cols=35  Identities=23%  Similarity=0.401  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            7 GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3477878 9999999999999999999    899999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.25  E-value=1.6e-07  Score=69.79  Aligned_cols=48  Identities=17%  Similarity=0.414  Sum_probs=40.1

Q ss_pred             CCCCccc-ccccCcccCChhHHH-HHhhcCcccccccccCCCChhhHHHH
Q 015552            7 RVSSKVW-CYYCDREFDDEKILV-QHQKAKHFKCHVCHKKLSTAGGMAIH   54 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk-~H~REKPfkC~~CgKsFs~~s~L~rH   54 (405)
                      ..++++| |.+|++.|.....|+ .|..+++|+|.+|++.|...+++..|
T Consensus         9 H~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            9 STNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             cCCCCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCcccccc
Confidence            3478888 999999999999886 22229999999999999999887655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=6.3e-07  Score=61.60  Aligned_cols=35  Identities=17%  Similarity=0.321  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            3477888 9999999999999999998    899999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=6.2e-07  Score=61.78  Aligned_cols=35  Identities=20%  Similarity=0.387  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.+.+.|.+|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3477888 9999999999999999998    899999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=6.2e-07  Score=61.66  Aligned_cols=35  Identities=20%  Similarity=0.369  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            3467888 9999999999999999998    899999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=7.7e-07  Score=61.06  Aligned_cols=35  Identities=26%  Similarity=0.359  Sum_probs=31.7

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +++|+|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3467777 9999999999999999998    899999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=7.6e-07  Score=61.20  Aligned_cols=34  Identities=21%  Similarity=0.297  Sum_probs=31.4

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      .+++.+ |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            8 TGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777 9999999999999999998    999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=7.4e-07  Score=61.27  Aligned_cols=35  Identities=23%  Similarity=0.363  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +++|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3467888 9999999999999999999    999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=7.1e-07  Score=61.22  Aligned_cols=35  Identities=26%  Similarity=0.339  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3477878 9999999999999999999    899999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=7.5e-07  Score=61.34  Aligned_cols=35  Identities=31%  Similarity=0.336  Sum_probs=31.8

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|.+|++    +|+|+|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3467777 9999999999999999999    899999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=7.2e-07  Score=61.32  Aligned_cols=35  Identities=26%  Similarity=0.374  Sum_probs=31.8

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.+++.|.+|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3467888 9999999999999999998    899999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=7.4e-07  Score=61.27  Aligned_cols=34  Identities=21%  Similarity=0.337  Sum_probs=31.5

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      .+++.| |.+|++.|.+++.|++|++    +|+|+|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            8 SGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            467888 9999999999999999999    899999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=8e-07  Score=60.98  Aligned_cols=35  Identities=23%  Similarity=0.211  Sum_probs=31.8

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|++.|.+...|++|++    +|+|+|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3467878 9999999999999999999    899999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=8.5e-07  Score=60.83  Aligned_cols=35  Identities=29%  Similarity=0.452  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|..+..|++|++    +++|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3467888 9999999999999999999    899999988

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.21  E-value=4e-07  Score=58.73  Aligned_cols=32  Identities=19%  Similarity=0.366  Sum_probs=26.3

Q ss_pred             hhcCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           31 QKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        31 ~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      ..+|+|+|.+|++.|.++++|.+|++.|++++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            33788999999999999999999988877664

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=6.2e-07  Score=61.65  Aligned_cols=35  Identities=23%  Similarity=0.369  Sum_probs=31.8

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3467778 9999999999999999999    899999988

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.20  E-value=1.4e-06  Score=67.94  Aligned_cols=35  Identities=9%  Similarity=0.264  Sum_probs=30.7

Q ss_pred             cCcccccc--cccCCCChhhHHHHh-hhhccccccccC
Q 015552           33 AKHFKCHV--CHKKLSTAGGMAIHV-LQVHKENVTKVP   67 (405)
Q Consensus        33 EKPfkC~~--CgKsFs~~s~L~rH~-r~hH~ekp~~cp   67 (405)
                      ||||+|.+  |+|+|.++++|++|+ ++|++++++-|-
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            99999976  999999999999997 578889886653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.19  E-value=3e-08  Score=79.79  Aligned_cols=32  Identities=19%  Similarity=0.447  Sum_probs=26.9

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.+|++.|.+.++|.+|+++|+++++
T Consensus        22 ~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp   53 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ   53 (88)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC
Confidence            38888888888888888888888888888776

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=9.7e-07  Score=60.64  Aligned_cols=35  Identities=29%  Similarity=0.414  Sum_probs=31.5

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3467888 9999999999999999999    899999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=9e-07  Score=60.83  Aligned_cols=35  Identities=23%  Similarity=0.353  Sum_probs=31.9

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +++|+|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            7 GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3477888 9999999999999999999    899999988

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.18  E-value=1.1e-06  Score=67.30  Aligned_cols=30  Identities=23%  Similarity=0.345  Sum_probs=26.4

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      ||+|+|.+|+|.|.++++|++|+++|++++
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            789999999999999999999998887765

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.18  E-value=5.5e-07  Score=57.80  Aligned_cols=31  Identities=23%  Similarity=0.492  Sum_probs=26.6

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      .+|+|+|.+|++.|.++++|.+|++.|++++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            3788999999999999999999998887765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=1.2e-06  Score=60.25  Aligned_cols=35  Identities=20%  Similarity=0.307  Sum_probs=31.5

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3477878 9999999999999999998    899999876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=7.3e-07  Score=69.23  Aligned_cols=65  Identities=14%  Similarity=0.064  Sum_probs=55.6

Q ss_pred             hHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcC
Q 015552           25 KILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        25 s~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      ..|..|++    +|++.|..|++.| ....|..|+ .+.++++            +.|..|++.|.. ..|..|++++.+
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~------------~~C~~C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGART------------ELCGNCGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCE------------EECSSSCCEEET-TGGGTHHHHBTT
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCc------------eEcccCCCcCcH-HHHHHHHHHccC
Confidence            45667776    8999999999999 489999998 8888776            888999999999 778999999988


Q ss_pred             CCcc
Q 015552          101 EVPS  104 (405)
Q Consensus       101 e~~~  104 (405)
                      +...
T Consensus        68 ~~~~   71 (75)
T 2d9k_A           68 EGSG   71 (75)
T ss_dssp             BSSS
T ss_pred             CcCC
Confidence            7654

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=1.4e-06  Score=59.88  Aligned_cols=35  Identities=20%  Similarity=0.356  Sum_probs=31.5

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh-----cCccccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R-----EKPfkC~~C   41 (405)
                      ..+++.| |.+|++.|.++..|++|++     +|+|+|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3477888 9999999999999999987     899999988

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=6.6e-07  Score=58.41  Aligned_cols=33  Identities=24%  Similarity=0.470  Sum_probs=27.2

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |..+|+|+|.+|++.|.++++|.+|++.|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            334788999999999999999999988887765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.14  E-value=9e-07  Score=57.74  Aligned_cols=28  Identities=25%  Similarity=0.498  Sum_probs=20.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      +|+|+|.+|++.|.++.+|.+|++.|++
T Consensus         9 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            9 IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            6777777777777777777777766654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=7.8e-07  Score=54.60  Aligned_cols=29  Identities=17%  Similarity=0.429  Sum_probs=25.2

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      ||+|+|.+|++.|.....|.+|++.|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            57899999999999999999998877765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.12  E-value=2.3e-07  Score=59.38  Aligned_cols=30  Identities=17%  Similarity=0.393  Sum_probs=27.2

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      |+|+|.+|++.|.++++|.+|+++|+++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            689999999999999999999988888775

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=9.1e-07  Score=60.34  Aligned_cols=29  Identities=14%  Similarity=0.187  Sum_probs=25.5

Q ss_pred             cCcccccc--cccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~--CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      ||||+|.+  |+|+|.++++|++|+++|+++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            88999986  999999999999999888765

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.10  E-value=2.1e-06  Score=58.41  Aligned_cols=32  Identities=25%  Similarity=0.402  Sum_probs=29.3

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh----cCcccccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      +++.| |.+|++.|.++..|++|++    +|+|+|.+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            67777 9999999999999999998    89999964

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=2.4e-06  Score=57.49  Aligned_cols=36  Identities=17%  Similarity=0.286  Sum_probs=31.1

Q ss_pred             CCCCCCCCccc-ccccCcccCChhHHHHHhh----cCcccc
Q 015552            3 KKKKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (405)
Q Consensus         3 kKkrr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC   38 (405)
                      ..+...+++.| |.+|++.|.+++.|++|++    +|+|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34445578888 9999999999999999999    899998

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.09  E-value=1.5e-06  Score=53.04  Aligned_cols=28  Identities=21%  Similarity=0.502  Sum_probs=23.3

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |+|+|.+|++.|.+.+.|.+|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5788989999999999999998777654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=1.5e-06  Score=56.15  Aligned_cols=29  Identities=28%  Similarity=0.543  Sum_probs=24.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      +++|+|.+|++.|.++.+|.+|+++|+++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            78889999999999999999998877765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.08  E-value=1.3e-06  Score=53.53  Aligned_cols=28  Identities=21%  Similarity=0.574  Sum_probs=24.2

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |+|+|.+|++.|.+.+.|.+|++.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            6789999999999999999998887765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=4.8e-07  Score=55.82  Aligned_cols=29  Identities=24%  Similarity=0.520  Sum_probs=25.6

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      +|+|+|.+|++.|.+..+|.+|++.|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            57899999999999999999999887765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.07  E-value=1.8e-06  Score=52.85  Aligned_cols=29  Identities=17%  Similarity=0.559  Sum_probs=25.0

Q ss_pred             CcccccccccCCCChhhHHHHhhhhcccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |+|+|.+|++.|...+.|.+|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            57899999999999999999988888764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=2e-06  Score=54.24  Aligned_cols=29  Identities=14%  Similarity=0.376  Sum_probs=25.6

Q ss_pred             cCccccc--ccccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~--~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      ||+|+|.  .|++.|.+.++|.+|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            6889999  8999999999999999888765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.2e-06  Score=56.85  Aligned_cols=30  Identities=20%  Similarity=0.478  Sum_probs=25.1

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      .+|+|+|.+|++.|.++++|.+|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            378899999999999999999998777654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=1.3e-06  Score=56.43  Aligned_cols=31  Identities=19%  Similarity=0.439  Sum_probs=25.8

Q ss_pred             hhcCcccccccccCCCChhhHHHHhhhhccc
Q 015552           31 QKAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        31 ~REKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      ..+|+|+|.+|++.|.++..|.+|+++|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3378899999999999999999998877765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=1.3e-06  Score=53.32  Aligned_cols=27  Identities=26%  Similarity=0.488  Sum_probs=23.4

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      ||+|+|.+|++.|.+.+.|.+|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            578999999999999999999987665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=3.1e-06  Score=58.33  Aligned_cols=35  Identities=20%  Similarity=0.311  Sum_probs=31.7

Q ss_pred             CCCCccc-cc--ccCcccCChhHHHHHhh----cCccccccc
Q 015552            7 RVSSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVC   41 (405)
Q Consensus         7 r~geKp~-C~--~CgK~F~~ks~Lk~H~R----EKPfkC~~C   41 (405)
                      ..+++.+ |.  .|++.|.++..|++|++    +|+|+|.+|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3477888 98  89999999999999999    899999988

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=1.8e-06  Score=52.43  Aligned_cols=28  Identities=29%  Similarity=0.559  Sum_probs=23.9

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |+|+|..|++.|....+|.+|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5788999999999999999998877765

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.05  E-value=2.9e-06  Score=56.85  Aligned_cols=35  Identities=17%  Similarity=0.311  Sum_probs=30.5

Q ss_pred             CCCCCCCccc-ccccCcccCChhHHHHHhh----cCcccc
Q 015552            4 KKKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (405)
Q Consensus         4 Kkrr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC   38 (405)
                      .+...+++.| |.+|++.|.++..|++|++    +|+|+|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3444578888 9999999999999999998    899998

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=1.1e-06  Score=53.67  Aligned_cols=26  Identities=19%  Similarity=0.479  Sum_probs=22.8

Q ss_pred             cCcccccccccCCCChhhHHHHhhhh
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      ||+|+|.+|++.|.++++|.+|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            57899999999999999999998765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=1.5e-06  Score=56.48  Aligned_cols=30  Identities=23%  Similarity=0.443  Sum_probs=25.8

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      .+|+|+|.+|++.|.+...|.+|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            378899999999999999999998887765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=3.7e-06  Score=57.89  Aligned_cols=34  Identities=18%  Similarity=0.261  Sum_probs=30.3

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCcccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4477878 9999999999999999998    89999974

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.03  E-value=1.3e-06  Score=70.11  Aligned_cols=50  Identities=10%  Similarity=0.181  Sum_probs=41.4

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhhccc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      .+++.| |.+|++.|.+...|++|++    ||+|+|..|    .++..|..|++.|.+.
T Consensus        21 ~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           21 LQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCCS
T ss_pred             CCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhcccccc
Confidence            367888 9999999999999999999    899999765    4566777777666553

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=1.5e-06  Score=56.35  Aligned_cols=30  Identities=23%  Similarity=0.501  Sum_probs=25.2

Q ss_pred             hcCcccccccccCCCChhhHHHHhhhhccc
Q 015552           32 KAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        32 REKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      .+|+|+|.+|++.|.+.++|.+|++.|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            378899999999999999999998777655

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=2.3e-06  Score=57.94  Aligned_cols=41  Identities=10%  Similarity=-0.160  Sum_probs=35.1

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +|+++|+++++            |.|.+|++.|.....|..|++.|.++++++
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKP------------YVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSS------------SCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCCCcC------------eECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            57777777665            999999999999999999999999887654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.03  E-value=1.5e-06  Score=52.80  Aligned_cols=26  Identities=23%  Similarity=0.508  Sum_probs=22.4

Q ss_pred             cCcccccccccCCCChhhHHHHhhhh
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      ||+|+|.+|++.|.+.+.|.+|++.|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            57899999999999999999998765

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.8e-06  Score=58.30  Aligned_cols=42  Identities=17%  Similarity=-0.049  Sum_probs=35.7

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|++.|+++++            |.|.+|++.|.....|..|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            2 SSGSSGTGGKP------------YQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSSCS------------SSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             CcccccCCCCC------------eECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            57777777665            9999999999999999999999998876654

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=3.3e-06  Score=56.66  Aligned_cols=34  Identities=18%  Similarity=0.186  Sum_probs=30.1

Q ss_pred             CCCCCCccc-ccccCcccCChhHHHHHhh----cCcccc
Q 015552            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (405)
Q Consensus         5 krr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC   38 (405)
                      +...+++.| |.+|++.|.++..|.+|++    +|+|+|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344578888 9999999999999999998    899998

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.02  E-value=1.3e-06  Score=61.35  Aligned_cols=33  Identities=21%  Similarity=0.544  Sum_probs=26.3

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhh-hhcccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVL-QVHKEN   62 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r-~hH~ek   62 (405)
                      |..+|+|+|.+|+|.|.++.+|.+|++ .|.++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            445889999999999999999999988 666654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=3e-06  Score=56.72  Aligned_cols=40  Identities=8%  Similarity=-0.162  Sum_probs=33.6

Q ss_pred             HhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      |+++|.++++            |.|.+|++.|...+.|.+|++.|.+++.++
T Consensus         1 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            1 GSSGSSGEKP------------YSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             CCSSSCSCCS------------CBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             CCcCcCCCCC------------eECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            5566666654            999999999999999999999999877654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=2.7e-06  Score=58.43  Aligned_cols=42  Identities=19%  Similarity=0.006  Sum_probs=35.9

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            2 SSGSSGSGEKP------------FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCSSS------------BCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcccCCCCCcC------------CCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            57777777665            9999999999999999999999998876654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=2.9e-06  Score=58.07  Aligned_cols=42  Identities=19%  Similarity=-0.002  Sum_probs=35.7

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|.++++            |.|.+|++.|.....|..|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            2 SSGSSGTGEKP------------YECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCCSSCCS------------SCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             ccccCCCCCCC------------cCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            57777776665            9999999999999999999999998877654

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=1.8e-06  Score=57.83  Aligned_cols=41  Identities=15%  Similarity=-0.042  Sum_probs=34.6

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +|+++|+++++            |.|.+|++.|...+.|..|+++|.++++.+
T Consensus         1 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            1 GSSGSSGGEKP------------YRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCCSCCS------------BCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CCccccCCCCC------------eeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            47777777665            999999999999999999999999887653

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=4e-06  Score=57.06  Aligned_cols=35  Identities=17%  Similarity=0.354  Sum_probs=30.5

Q ss_pred             CCCCCCccc-ccccCcccCChhHHHHHhh----cCccccc
Q 015552            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (405)
Q Consensus         5 krr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~   39 (405)
                      +...+++.+ |.+|++.|.+...|++|++    +|+|+|.
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            344577888 9999999999999999999    8999984

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=3.2e-06  Score=58.05  Aligned_cols=41  Identities=12%  Similarity=-0.125  Sum_probs=35.1

Q ss_pred             HhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      |+++|.++++            |.|.+|++.|.....|.+|++.|.+++.++.
T Consensus         3 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            3 SGSSGSGKKP------------YECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCSCCCSCS------------CCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCcCCCCC------------cCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            6667766665            9999999999999999999999998877654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=2.6e-06  Score=58.44  Aligned_cols=42  Identities=19%  Similarity=0.007  Sum_probs=35.6

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|.++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            2 SSGSSGTGEKP------------YKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCS------------CBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCCcCCCCCcC------------eECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            47777776665            9999999999999999999999998876654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.01  E-value=1.7e-06  Score=56.81  Aligned_cols=32  Identities=19%  Similarity=0.381  Sum_probs=27.7

Q ss_pred             hcCccccc--ccccCCCChhhHHHHhhhhccccc
Q 015552           32 KAKHFKCH--VCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        32 REKPfkC~--~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      .+|+|+|.  .|++.|.++++|.+|+++|+++++
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            37899999  599999999999999988888765

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=4.2e-06  Score=57.57  Aligned_cols=35  Identities=23%  Similarity=0.391  Sum_probs=30.7

Q ss_pred             CCCCCccc-ccccCcccCChhHHHHHhh----cCcccccc
Q 015552            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus         6 rr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      ...++|.| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            34477878 9999999999999999999    89999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.00  E-value=2.8e-06  Score=58.29  Aligned_cols=42  Identities=21%  Similarity=0.025  Sum_probs=35.5

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            2 SSGSSGTGEKP------------YKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCCT------------TCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCCcCCCCCcC------------eECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            47777776665            9999999999999999999999998876654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.00  E-value=3.9e-06  Score=57.64  Aligned_cols=34  Identities=24%  Similarity=0.366  Sum_probs=30.4

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCcccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3467888 9999999999999999998    89999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.99  E-value=3.9e-06  Score=57.38  Aligned_cols=34  Identities=26%  Similarity=0.421  Sum_probs=30.2

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCcccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      ..+++.| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3467878 9999999999999999999    89999964

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.99  E-value=1.9e-06  Score=56.30  Aligned_cols=32  Identities=13%  Similarity=0.279  Sum_probs=25.9

Q ss_pred             HhhcCcccccccccCCCCh-hhHHHHhhhhccc
Q 015552           30 HQKAKHFKCHVCHKKLSTA-GGMAIHVLQVHKE   61 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~-s~L~rH~r~hH~e   61 (405)
                      |..+|+|+|.+|++.|.++ ++|.+|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            3337889999999999998 8999998877765

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=2.1e-06  Score=52.28  Aligned_cols=29  Identities=28%  Similarity=0.540  Sum_probs=24.1

Q ss_pred             CcccccccccCCCChhhHHHHhhhhcccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |+|+|.+|++.|.....|.+|++.|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            57889999999999999999988777653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=8.7e-07  Score=54.54  Aligned_cols=28  Identities=32%  Similarity=0.534  Sum_probs=24.1

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |+|+|.+|++.|.+.++|.+|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5789999999999999999998877765

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.98  E-value=4.3e-06  Score=57.19  Aligned_cols=34  Identities=24%  Similarity=0.444  Sum_probs=30.3

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCcccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      ..+++.| |.+|++.|.++..|.+|++    +|+|+|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3467888 9999999999999999999    89999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.98  E-value=3e-06  Score=58.11  Aligned_cols=42  Identities=17%  Similarity=-0.061  Sum_probs=35.7

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|.....|..|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            2 SSGSSGTGEKP------------YKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCC------------CCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CcccccCCCCC------------eECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            57777777665            9999999999999999999999998876654

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=4.7e-06  Score=55.69  Aligned_cols=31  Identities=19%  Similarity=0.477  Sum_probs=28.5

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhh----cCcccc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC   38 (405)
                      .+++.+ |.+|++.|.+...|++|++    +|+|+|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            6 SGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            467888 9999999999999999999    899998

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.98  E-value=3.2e-06  Score=58.12  Aligned_cols=42  Identities=17%  Similarity=0.053  Sum_probs=35.7

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            2 SSGSSGMGEKC------------YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCCC------------CBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCccccCCCCC------------eECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            47777776665            9999999999999999999999998877654

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=4.9e-06  Score=56.90  Aligned_cols=34  Identities=24%  Similarity=0.389  Sum_probs=30.3

Q ss_pred             CCCCccc-ccccCcccCChhHHHHHhh----cCcccccc
Q 015552            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus         7 r~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      ..+++.| |.+|++.|.++..|++|++    +|+|+|.+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3467878 9999999999999999999    89999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=5.1e-06  Score=56.92  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=30.6

Q ss_pred             CCCCCccc-ccccCcccCChhHHHHHhh----cCcccccc
Q 015552            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus         6 rr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      ...+++.| |.+|+|.|.++..|++|++    +|+|+|..
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            6 SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            34467878 9999999999999999999    89999964

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=97.97  E-value=2.8e-06  Score=57.01  Aligned_cols=40  Identities=18%  Similarity=0.018  Sum_probs=33.7

Q ss_pred             HhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      |+++|.++++            |.|.+|++.|...+.|.+|++.|.+++.++
T Consensus         1 H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENP------------YECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCS------------EECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCC------------ccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            5666666654            999999999999999999999999887654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=3.3e-06  Score=57.91  Aligned_cols=42  Identities=19%  Similarity=-0.093  Sum_probs=35.4

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      .|+++|.++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            2 SSGSSGTGENP------------FICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCCCSCCS------------CBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCCCC------------EECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            47777776665            9999999999999999999999998876654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=2.5e-06  Score=58.19  Aligned_cols=41  Identities=12%  Similarity=-0.080  Sum_probs=34.9

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +|+++|+++++            |.|.+|++.|...+.|..|++.|.++++..
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKP------------YECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCS------------EECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCCcccCCCcC------------eECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            47777777765            999999999999999999999999887653

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=6e-06  Score=56.69  Aligned_cols=35  Identities=26%  Similarity=0.428  Sum_probs=30.5

Q ss_pred             CCCCCccc-ccccCcccCChhHHHHHhh----cCcccccc
Q 015552            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus         6 rr~geKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      ...+++.| |.+|+|.|.++..|++|++    +|+|+|..
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34467878 9999999999999999999    89999963

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.96  E-value=3.8e-06  Score=52.60  Aligned_cols=28  Identities=21%  Similarity=0.471  Sum_probs=23.8

Q ss_pred             Cccccc--ccccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCH--VCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~--~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |+|+|.  .|++.|.+.++|.+|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            578897  8999999999999998887765

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=4e-06  Score=57.58  Aligned_cols=42  Identities=12%  Similarity=-0.071  Sum_probs=35.4

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|.++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~h~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            2 SSGSSGAGKKL------------FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCSSCC------------CBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCCCC------------EECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            46767776665            9999999999999999999999998877654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=2.5e-06  Score=58.64  Aligned_cols=42  Identities=14%  Similarity=-0.127  Sum_probs=36.0

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|.....|.+|++.|.+++.++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKP------------YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCC------------EECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCC------------EECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            57777777665            9999999999999999999999998877654

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=2.5e-06  Score=58.63  Aligned_cols=42  Identities=17%  Similarity=-0.033  Sum_probs=35.7

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|.....|..|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            2 SSGSSGTGERH------------YECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCC------------EECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             CcccCcCCCCC------------eECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            47777777665            9999999999999999999999998876654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.94  E-value=2.6e-06  Score=58.36  Aligned_cols=42  Identities=19%  Similarity=0.007  Sum_probs=35.8

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|++.|+++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            2 SSGSSGTGEKP------------YKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCC------------EECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CccCCCCCCCC------------eeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            57777777665            9999999999999999999999998876654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=2.2e-06  Score=58.27  Aligned_cols=41  Identities=10%  Similarity=-0.118  Sum_probs=35.1

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +|+++|.++++            |.|.+|++.|.....|.+|++.|.+++.++
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            2 SSGSSGAGENP------------FKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCSCCCSCCCS------------EECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CCccccCCCCC------------eECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            57777777665            999999999999999999999999887654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.94  E-value=2.8e-06  Score=57.51  Aligned_cols=41  Identities=10%  Similarity=-0.136  Sum_probs=35.0

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +|+++|.++++            |.|.+|++.|.....|..|+++|.++++++
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKP------------YECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCS------------EECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCccCCCCCCC------------eECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            57777776665            999999999999999999999999887654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.94  E-value=1.9e-06  Score=59.24  Aligned_cols=42  Identities=14%  Similarity=-0.005  Sum_probs=36.0

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|...+.|.+|++.|.+++.++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            2 SSGSSGTGEKP------------YSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSCCCCSSCCS------------EEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CccccCCCCCC------------eECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            57777777665            9999999999999999999999998876654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.94  E-value=3.6e-06  Score=57.82  Aligned_cols=42  Identities=17%  Similarity=-0.096  Sum_probs=35.6

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|.++++            |.|.+|++.|.....|..|+++|.+++.++.
T Consensus         2 ~h~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            2 SSGSSGSGERP------------FKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCCSCSSCCCS------------CCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCcCCCCCCC------------eECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            47777776665            9999999999999999999999998876654

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.93  E-value=2.9e-06  Score=58.06  Aligned_cols=42  Identities=19%  Similarity=-0.039  Sum_probs=35.7

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTGEKP------------YICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSCCS------------EECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCCcC------------EECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            47777777665            9999999999999999999999998876654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.93  E-value=2.8e-06  Score=58.27  Aligned_cols=42  Identities=17%  Similarity=0.011  Sum_probs=35.8

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|++.|.++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            2 SSGSSGTGEKP------------YECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCS------------EECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCCCcC------------eECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            57777777665            9999999999999999999999998876654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.93  E-value=4.4e-06  Score=50.25  Aligned_cols=26  Identities=15%  Similarity=0.478  Sum_probs=20.7

Q ss_pred             cccccccccCCCChhhHHHHhhhhcc
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      +|+|.+|++.|.+++.|.+|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57888888888888888888877664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.92  E-value=3.6e-06  Score=57.80  Aligned_cols=42  Identities=14%  Similarity=-0.048  Sum_probs=35.8

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      .|+++|.++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            2 SSGSSGTGQRP------------YECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCCCSSS------------EECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CCccccCCCcC------------cCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            47777777665            9999999999999999999999998877654

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.91  E-value=3e-06  Score=58.02  Aligned_cols=42  Identities=17%  Similarity=-0.062  Sum_probs=35.6

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|.....|.+|++.|.++++++.
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSGSSGTGEKP------------YRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCC------------EECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCccCCCCCCC------------eECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            47777777665            9999999999999999999999998876654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.91  E-value=2.2e-06  Score=58.77  Aligned_cols=42  Identities=19%  Similarity=-0.027  Sum_probs=36.0

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|+++++            |.|.+|++.|.....|..|+++|.+++.++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            2 SSGSSGTGEKP------------FQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCCSCCCCS------------EECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccccccCCCCC------------eeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            57777777665            9999999999999999999999998877654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.90  E-value=2.4e-06  Score=56.17  Aligned_cols=31  Identities=16%  Similarity=0.330  Sum_probs=23.6

Q ss_pred             HhhcCcccccccccCCCChhhHHHH-hhhhcc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIH-VLQVHK   60 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH-~r~hH~   60 (405)
                      |..+|+|+|.+|++.|.++++|.+| ++.|++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            3447888888888888888888888 665554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.89  E-value=3.7e-06  Score=56.96  Aligned_cols=41  Identities=15%  Similarity=-0.052  Sum_probs=34.8

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      .|+++|.++++            |.|.+|++.|...+.|..|++.|.+++.++
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTGENP------------YECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             CSCCSSSSCCS------------CEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CCccccCCCcC------------eeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            47777777665            999999999999999999999999877654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.89  E-value=6.7e-06  Score=53.46  Aligned_cols=36  Identities=11%  Similarity=-0.187  Sum_probs=31.0

Q ss_pred             HhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      |++.|.++++            |+|.+|++.|.....|..|++.|.++
T Consensus         2 H~~~h~~~k~------------~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKP------------FQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSS------------BCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCC------------ccCCCCCcccCcHHHHHHHHHHhccC
Confidence            6667777665            99999999999999999999999764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.89  E-value=5.3e-06  Score=51.06  Aligned_cols=28  Identities=14%  Similarity=0.360  Sum_probs=23.1

Q ss_pred             CcccccccccCCCChhhHHHH-hhhhccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIH-VLQVHKE   61 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH-~r~hH~e   61 (405)
                      |+|+|..|++.|.+.++|.+| ++.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            578999999999999999999 6666554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=4e-06  Score=56.93  Aligned_cols=41  Identities=7%  Similarity=-0.133  Sum_probs=35.0

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +|++.|.++++            |.|.+|++.|.....|..|++.|.++++++
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKR------------YECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSS------------EECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCC------------eECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            57777776665            999999999999999999999999887654

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.87  E-value=3.5e-06  Score=57.64  Aligned_cols=42  Identities=14%  Similarity=-0.027  Sum_probs=35.6

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +|+++|.++++            |.|.+|++.|...+.|.+|++.|.+++.++.
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            2 SSGSSGTGEKP------------YECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCS------------SEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CcccCCCCCCC------------eECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            57777776665            9999999999999999999999998876654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.83  E-value=5.5e-06  Score=54.41  Aligned_cols=31  Identities=26%  Similarity=0.454  Sum_probs=25.6

Q ss_pred             hcCcccccc--cccCCCChhhHHHHhhhhcccc
Q 015552           32 KAKHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        32 REKPfkC~~--CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      .+|+|+|.+  |++.|.++++|.+|+++|++++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            378899985  9999999999999988877653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.83  E-value=5.2e-06  Score=56.03  Aligned_cols=23  Identities=22%  Similarity=0.483  Sum_probs=15.6

Q ss_pred             cCcccccccccCCCChhhHHHHh
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHV   55 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~   55 (405)
                      ||+|+|.+|+|+|.++++|.+|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            56666666666666666666665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.03  E-value=2.5e-06  Score=51.27  Aligned_cols=25  Identities=24%  Similarity=0.553  Sum_probs=21.1

Q ss_pred             CcccccccccCCCChhhHHHHhhhh
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      |+|+|.+|++.|.+.+.|.+|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5788999999999988898888665

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.79  E-value=3.3e-06  Score=57.37  Aligned_cols=41  Identities=7%  Similarity=-0.159  Sum_probs=35.1

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      +|+++|.++++            |.|.+|++.|.....|.+|+++|.++++++
T Consensus         2 ~H~~~H~~~~~------------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKS------------YNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCC------------EEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCCCCC------------eECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            57777777665            999999999999999999999999887654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.76  E-value=2.8e-06  Score=59.14  Aligned_cols=32  Identities=19%  Similarity=0.373  Sum_probs=24.6

Q ss_pred             HhhcCccccc--ccccCCCChhhHHHHhhhhccc
Q 015552           30 HQKAKHFKCH--VCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        30 H~REKPfkC~--~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |..+|+|+|.  .|++.|.++++|.+|+++|+++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3338888885  5888888888888888777665

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.76  E-value=7.3e-06  Score=56.23  Aligned_cols=41  Identities=10%  Similarity=-0.138  Sum_probs=34.5

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcC-CCccc
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE-EVPSK  105 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~-e~~~k  105 (405)
                      .|+++|.++++            |.|.+|++.|.....|..|++.|.+ +++++
T Consensus         2 ~H~~~H~~~k~------------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~   43 (46)
T 2eoy_A            2 SSGSSGQKEKC------------FKCNKCEKTFSCSKYLTQHERIHTRGVKSGP   43 (46)
T ss_dssp             CCCCCCCCSCC------------EECSSSCCEESSSHHHHHHHTTCCSCCTTSS
T ss_pred             CCccccCCCCC------------EECcCCCCcCCCHHHHHHHHHHcCCCCCCCC
Confidence            36777776665            9999999999999999999999998 76654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.74  E-value=1.1e-05  Score=54.34  Aligned_cols=30  Identities=23%  Similarity=0.558  Sum_probs=27.1

Q ss_pred             CCCccc-ccccCcccCChhHHHHHhhcCcccccc
Q 015552            8 VSSKVW-CYYCDREFDDEKILVQHQKAKHFKCHV   40 (405)
Q Consensus         8 ~geKp~-C~~CgK~F~~ks~Lk~H~REKPfkC~~   40 (405)
                      .+||+| |.+|+|.|.++++|++|+   +|+|..
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~---py~C~~   34 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ---AYYCSH   34 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH---HHTSTT
T ss_pred             CCccCeECCCCCCccCCHhHccCcC---CeECcC
Confidence            478898 999999999999999999   788865

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.67  E-value=1.6e-05  Score=51.57  Aligned_cols=27  Identities=11%  Similarity=0.080  Sum_probs=25.5

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      |.|.+|++.|...+.|..|++.|.+++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A           10 YSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             cCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            999999999999999999999998865

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.64  E-value=4e-05  Score=49.01  Aligned_cols=31  Identities=13%  Similarity=-0.057  Sum_probs=28.0

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCCCccc
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVPSK  105 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k  105 (405)
                      .|+|.+|++.|...+.|..|+++|.+++...
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            3899999999999999999999999887653

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.55  E-value=2.5e-05  Score=47.40  Aligned_cols=26  Identities=15%  Similarity=0.341  Sum_probs=21.6

Q ss_pred             Cccccc--ccccCCCChhhHHHHhhhhc
Q 015552           34 KHFKCH--VCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        34 KPfkC~--~CgKsFs~~s~L~rH~r~hH   59 (405)
                      |+|+|.  .|++.|.+.+.|.+|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            578888  89999988888888887664

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.52  E-value=4.1e-05  Score=48.71  Aligned_cols=29  Identities=10%  Similarity=-0.046  Sum_probs=26.1

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      +.|.|.+|++.|...+.|.+|++.|.+++
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            34999999999999999999999998764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.52  E-value=4.4e-05  Score=50.32  Aligned_cols=33  Identities=9%  Similarity=0.011  Sum_probs=29.3

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhcCCCcccc
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKM  106 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~k~  106 (405)
                      +.|.|.+|++.|...+.|..|++.|.+++...+
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            349999999999999999999999999877654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.49  E-value=5.2e-05  Score=48.44  Aligned_cols=29  Identities=10%  Similarity=-0.093  Sum_probs=26.1

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      +.|.|.+|++.|...+.|.+|++.|.+++
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            34999999999999999999999998764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.41  E-value=0.00012  Score=46.90  Aligned_cols=29  Identities=10%  Similarity=0.030  Sum_probs=26.0

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      +.|.|.+|++.|.....|.+|+++|.+++
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            34999999999999999999999998763

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.38  E-value=6.7e-05  Score=48.32  Aligned_cols=27  Identities=11%  Similarity=-0.160  Sum_probs=25.0

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.+|++.|.....|..|+++|.++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            9 LYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            399999999999999999999999865

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.36  E-value=6.1e-05  Score=48.82  Aligned_cols=26  Identities=12%  Similarity=-0.045  Sum_probs=24.5

Q ss_pred             cccccCCCCCCCh-HHHHHHHhhhcCC
Q 015552           76 TDIEIYGMQGIPP-DVLAAHYGEEEEE  101 (405)
Q Consensus        76 ~~C~iCgk~F~~~-s~L~~H~r~h~~e  101 (405)
                      |.|.+|++.|... +.|.+|++.|.++
T Consensus        10 ~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A           10 MKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             EECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             eECCCCChhhccCHHHHHHHHHhcCCC
Confidence            9999999999999 9999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.35  E-value=0.00014  Score=43.92  Aligned_cols=27  Identities=22%  Similarity=0.170  Sum_probs=24.9

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.+|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            389999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.35  E-value=5.5e-05  Score=49.44  Aligned_cols=26  Identities=12%  Similarity=0.054  Sum_probs=24.0

Q ss_pred             cccccCCCCCCChHHHHHH-HhhhcCC
Q 015552           76 TDIEIYGMQGIPPDVLAAH-YGEEEEE  101 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H-~r~h~~e  101 (405)
                      |+|.+|++.|.....|..| ++.|.++
T Consensus        10 ~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A           10 YYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             EECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHHccCc
Confidence            9999999999999999999 8888764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.34  E-value=8.4e-05  Score=47.83  Aligned_cols=27  Identities=15%  Similarity=0.128  Sum_probs=25.0

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|+|.+|++.|.....|..|++.|.++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            9 PFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhccC
Confidence            399999999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.29  E-value=0.00011  Score=47.14  Aligned_cols=27  Identities=11%  Similarity=0.027  Sum_probs=25.1

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.+|++.|.....|..|++.|.++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            9 PYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            499999999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.25  E-value=0.00012  Score=44.34  Aligned_cols=27  Identities=15%  Similarity=-0.017  Sum_probs=25.0

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.+|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            389999999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.25  E-value=0.00021  Score=43.24  Aligned_cols=28  Identities=7%  Similarity=0.112  Sum_probs=25.5

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      .|.|.+|++.|.....|..|++.|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            3899999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=0.00019  Score=43.06  Aligned_cols=27  Identities=11%  Similarity=-0.086  Sum_probs=25.0

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.+|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            389999999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.23  E-value=0.00071  Score=51.52  Aligned_cols=30  Identities=10%  Similarity=-0.017  Sum_probs=26.9

Q ss_pred             CCccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           73 RESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        73 Rk~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      ++.|+|.+|+|.|.....|.+|+++|.++.
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            345999999999999999999999999864

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.22  E-value=0.00016  Score=49.08  Aligned_cols=28  Identities=11%  Similarity=-0.128  Sum_probs=25.1

Q ss_pred             Ccccccc--CCCCCCChHHHHHHHhhhcCC
Q 015552           74 ESTDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        74 k~~~C~i--Cgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +.|+|.+  |++.|...+.|.+|+++|+++
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4499976  999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.22  E-value=0.00016  Score=43.83  Aligned_cols=27  Identities=11%  Similarity=0.140  Sum_probs=25.0

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.+|++.|.....|..|++.|.++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhccC
Confidence            499999999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.21  E-value=0.00016  Score=46.43  Aligned_cols=28  Identities=18%  Similarity=-0.033  Sum_probs=25.6

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +.|.|.+|++.|.....|..|+++|.++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            3499999999999999999999999875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.20  E-value=0.00023  Score=42.39  Aligned_cols=26  Identities=8%  Similarity=0.041  Sum_probs=23.6

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcCC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      |.|.+|++.|.....|..|++.|.++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            78999999999999999999998763

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.17  E-value=6.5e-05  Score=52.05  Aligned_cols=38  Identities=5%  Similarity=-0.135  Sum_probs=30.9

Q ss_pred             HHHhhhhccccccccCCCCCCCCccccc--cCCCCCCChHHHHHHHhhhcCC
Q 015552           52 AIHVLQVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        52 ~rH~r~hH~ekp~~cp~~kpgRk~~~C~--iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      ..|...|.++++            |.|.  +|++.|...+.|.+|++.|.++
T Consensus         7 ~~~~~~H~~~k~------------~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKT------------FECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTE------------EECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCC------------eECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            344456777765            8885  7999999999999999999876

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=0.00018  Score=43.31  Aligned_cols=27  Identities=19%  Similarity=0.063  Sum_probs=25.0

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.+|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            389999999999999999999999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.11  E-value=0.00016  Score=50.36  Aligned_cols=30  Identities=20%  Similarity=0.165  Sum_probs=24.4

Q ss_pred             ccccccCCCCCCChHHHHHHHh-hhcCCCcc
Q 015552           75 STDIEIYGMQGIPPDVLAAHYG-EEEEEVPS  104 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r-~h~~e~~~  104 (405)
                      .|.|.+|++.|.....|..|++ .|.++...
T Consensus         7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            7 PYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            3999999999999999999999 89876543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.11  E-value=0.00033  Score=43.34  Aligned_cols=27  Identities=19%  Similarity=0.065  Sum_probs=24.7

Q ss_pred             ccccc--cCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIE--IYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~--iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.  +|++.|...+.|..|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            38897  9999999999999999999875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.10  E-value=0.00034  Score=43.51  Aligned_cols=27  Identities=11%  Similarity=0.005  Sum_probs=24.9

Q ss_pred             ccccc--cCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIE--IYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~--iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.  .|++.|.....|..|+++|.++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            48998  8999999999999999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.08  E-value=0.00086  Score=52.20  Aligned_cols=47  Identities=15%  Similarity=0.108  Sum_probs=36.1

Q ss_pred             ccCCCCCCCCcccccc--CCCCCCChHHHHHHH-hhhcCCCcccccccCC
Q 015552           65 KVPNAKPGRESTDIEI--YGMQGIPPDVLAAHY-GEEEEEVPSKMAKVDT  111 (405)
Q Consensus        65 ~cp~~kpgRk~~~C~i--Cgk~F~~~s~L~~H~-r~h~~e~~~k~ak~~~  111 (405)
                      .|.....++++|+|..  |++.|.+.+.|.+|+ ++|+++++.-....+.
T Consensus        17 ~~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~~   66 (73)
T 1x3c_A           17 EFPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEE   66 (73)
T ss_dssp             CCSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCCC
T ss_pred             cccccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccccc
Confidence            3444445566699964  999999999999997 6899998877665543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.07  E-value=0.00023  Score=42.82  Aligned_cols=26  Identities=12%  Similarity=0.133  Sum_probs=23.7

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      .|+|.+|++.|.....|..|++.|.+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcCC
Confidence            49999999999999999999998864

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.12  E-value=9e-05  Score=45.12  Aligned_cols=27  Identities=19%  Similarity=0.161  Sum_probs=24.8

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.+|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            389999999999999999999999865

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.00  E-value=0.00028  Score=42.26  Aligned_cols=25  Identities=4%  Similarity=0.011  Sum_probs=23.0

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhc
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      .|.|.+|++.|.....|..|++.|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHcc
Confidence            4999999999999999999998874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=96.99  E-value=4.9e-05  Score=48.13  Aligned_cols=29  Identities=14%  Similarity=0.000  Sum_probs=26.4

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCCCc
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e~~  103 (405)
                      .|+|.+|++.|...+.|.+|+++|.++++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            38999999999999999999999988764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.99  E-value=0.00029  Score=42.48  Aligned_cols=23  Identities=13%  Similarity=0.349  Sum_probs=20.6

Q ss_pred             Cccc-ccccCcccCChhHHHHHhh
Q 015552           10 SKVW-CYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        10 eKp~-C~~CgK~F~~ks~Lk~H~R   32 (405)
                      +|+| |.+|++.|.+.+.|++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMR   24 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHT
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHH
Confidence            4566 9999999999999999986

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.98  E-value=0.00039  Score=42.29  Aligned_cols=27  Identities=11%  Similarity=0.009  Sum_probs=24.3

Q ss_pred             ccccccCCCCCCChHHHHHH-HhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAH-YGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H-~r~h~~e  101 (405)
                      .|.|.+|++.|...+.|..| ++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            38999999999999999999 7888765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.92  E-value=0.0004  Score=45.07  Aligned_cols=30  Identities=20%  Similarity=0.059  Sum_probs=26.5

Q ss_pred             Cccccc--cCCCCCCChHHHHHHHhhhcCCCc
Q 015552           74 ESTDIE--IYGMQGIPPDVLAAHYGEEEEEVP  103 (405)
Q Consensus        74 k~~~C~--iCgk~F~~~s~L~~H~r~h~~e~~  103 (405)
                      +.|.|.  .|++.|...+.|.+|++.|.+++.
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             cceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            349999  599999999999999999988764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=96.89  E-value=0.00044  Score=44.95  Aligned_cols=28  Identities=18%  Similarity=-0.064  Sum_probs=24.9

Q ss_pred             Cccccc--cCCCCCCChHHHHHHHhhhcCC
Q 015552           74 ESTDIE--IYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        74 k~~~C~--iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +.|.|.  .|++.|...+.|.+|+++|.++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            349998  4999999999999999999876

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.92  E-value=0.00016  Score=44.05  Aligned_cols=27  Identities=19%  Similarity=-0.026  Sum_probs=24.7

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .|.|.+|++.|.....|..|++.|.++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            389999999999999999999999765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.88  E-value=0.00018  Score=42.77  Aligned_cols=25  Identities=20%  Similarity=0.174  Sum_probs=22.7

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhc
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      .|.|.+||+.|...+.|..|++.|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            3899999999999999999998874

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.46  E-value=0.0021  Score=48.44  Aligned_cols=57  Identities=18%  Similarity=0.258  Sum_probs=34.0

Q ss_pred             ccccc--cccCCCChhhHHHHhhh-hccccccccCCCCCCCCccccc--cCCCCCCChHHHHHHHhhh
Q 015552           36 FKCHV--CHKKLSTAGGMAIHVLQ-VHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEE   98 (405)
Q Consensus        36 fkC~~--CgKsFs~~s~L~rH~r~-hH~ekp~~cp~~kpgRk~~~C~--iCgk~F~~~s~L~~H~r~h   98 (405)
                      |.|..  |++.|.+...|.+|+.. |.+.+.      ......|.|.  .|++.+.....|..|++.+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~------~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDF------KHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCC------CCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCccc------CCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            44554  77777777777777643 333221      0011236664  7777777777777777764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.40  E-value=0.0011  Score=39.76  Aligned_cols=26  Identities=12%  Similarity=-0.171  Sum_probs=23.5

Q ss_pred             ccccc--cCCCCCCChHHHHHHHhhhcC
Q 015552           75 STDIE--IYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        75 ~~~C~--iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      .|.|.  +|++.|...+.|..|+++|.+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            38899  999999999999999999863

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.30  E-value=0.0047  Score=46.43  Aligned_cols=46  Identities=17%  Similarity=0.327  Sum_probs=40.0

Q ss_pred             ccc--cCcccCChhHHHHHhh-----cC------ccccc--ccccCCCChhhHHHHhhhhc
Q 015552           14 CYY--CDREFDDEKILVQHQK-----AK------HFKCH--VCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        14 C~~--CgK~F~~ks~Lk~H~R-----EK------PfkC~--~CgKsFs~~s~L~rH~r~hH   59 (405)
                      |.+  |++.|.....|..|+.     .+      .|.|.  .|++.+.....|.+|+|..|
T Consensus         4 C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            4 CKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             EeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            665  9999999999999985     22      79998  59999999999999998765

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.55  E-value=0.005  Score=52.60  Aligned_cols=24  Identities=25%  Similarity=0.211  Sum_probs=20.9

Q ss_pred             CccccccCCCCCCChHHHHHHHhh
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGE   97 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~   97 (405)
                      ..|.|.+|++.|.....|..|++.
T Consensus        92 ~~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           92 RSKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             TTTEETTTTEECSSHHHHHHHHTS
T ss_pred             CCeEcCCCCCEeCCHHHHHHHHCC
Confidence            348899999999999999999753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.61  E-value=0.0097  Score=50.93  Aligned_cols=27  Identities=11%  Similarity=0.326  Sum_probs=24.6

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      +++|.|..|+|.|.+.++|..|+|+..
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             CcceEcccCcchhCCHHHHHHHHhhhh
Confidence            899999999999999999999987653

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=93.88  E-value=0.019  Score=49.18  Aligned_cols=28  Identities=29%  Similarity=0.496  Sum_probs=23.4

Q ss_pred             CCccc-ccccCcccCChhHHHHHhhcCcc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQKAKHF   36 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~REKPf   36 (405)
                      |++.| |..|+|.|.+...|..|+|.|.+
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~rsK~H   75 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFRSKDH   75 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTCHHH
T ss_pred             CCcceEcccCcchhCCHHHHHHHHhhhhh
Confidence            45666 99999999999999999994443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=89.69  E-value=0.17  Score=44.37  Aligned_cols=77  Identities=16%  Similarity=0.196  Sum_probs=50.2

Q ss_pred             ccc--cccCcccCChhHHHHHhh---cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCC
Q 015552           12 VWC--YYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (405)
Q Consensus        12 p~C--~~CgK~F~~ks~Lk~H~R---EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~   86 (405)
                      .+|  .-|+..+.. ..|..|.+   .++..|..|+..+ .+..|..|+...-..+            ...|..|+..+.
T Consensus        83 v~C~n~GC~~~~~~-~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r------------~~~C~~C~~~~~  148 (170)
T 3hcs_A           83 VKCPNEGCLHKMEL-RHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRR------------QVSCDNCAASMA  148 (170)
T ss_dssp             EECCSTTCCCEEEG-GGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTC------------EEECTTTCCEEE
T ss_pred             cCCCCCCCCceecH-hHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCC------------CeECCCCCCccC
Confidence            347  357766554 45778877   5677888898887 5567888864332222            267888988775


Q ss_pred             ChHHHHHHHhhhcCCCc
Q 015552           87 PPDVLAAHYGEEEEEVP  103 (405)
Q Consensus        87 ~~s~L~~H~r~h~~e~~  103 (405)
                      . ..|+.|+..+.|+..
T Consensus       149 ~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          149 F-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             G-GGHHHHHTTCCC---
T ss_pred             H-HHHHhHHHhCcChhh
Confidence            4 567899888877654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.09  E-value=0.2  Score=35.74  Aligned_cols=22  Identities=14%  Similarity=0.354  Sum_probs=14.6

Q ss_pred             cccccccccCCCChhhHHHHhh
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVL   56 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r   56 (405)
                      .|.|..|++.|...+.|++|++
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4566667777777777777763

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=86.51  E-value=0.36  Score=31.58  Aligned_cols=22  Identities=32%  Similarity=0.845  Sum_probs=17.2

Q ss_pred             cccccccCcccCChhHHHHHhh
Q 015552           11 KVWCYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        11 Kp~C~~CgK~F~~ks~Lk~H~R   32 (405)
                      |-.|.+|.|.+++-.+|.+|+|
T Consensus         9 kqhcrfckkkysdvknlikhir   30 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIR   30 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            3348888888888888888887

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.40  E-value=0.43  Score=38.22  Aligned_cols=28  Identities=18%  Similarity=0.383  Sum_probs=22.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      +.-..|..|||.|.   .|++|++++|+..+
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             CCceEecccchhhH---HHHHHHHHccCCCH
Confidence            34467999999998   48899988888765

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.58  E-value=1.9  Score=30.70  Aligned_cols=29  Identities=14%  Similarity=-0.107  Sum_probs=24.7

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      .+|.|..|+..|...+.|+.|++-..++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcch
Confidence            34889999999999999999999766543

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.14  E-value=0.44  Score=37.23  Aligned_cols=27  Identities=22%  Similarity=0.577  Sum_probs=20.7

Q ss_pred             ccccccccCCC-------ChhhHHHHhhhhcccc
Q 015552           36 FKCHVCHKKLS-------TAGGMAIHVLQVHKEN   62 (405)
Q Consensus        36 fkC~~CgKsFs-------~~s~L~rH~r~hH~ek   62 (405)
                      -.|.+|++.|.       .-++|.+|++.+|.++
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e   62 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREE   62 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCHHH
Confidence            46888888776       2478999998888765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	405
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-04
d1zr9a1	67	g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593	0.003

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 9e-04
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV 63
          H   K ++C++CH + + +G M +H+LQ H ENV
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 14 CYYCDREFDDEKILVQHQKAKHFK 37
          C  C R F D   L  H ++K  K
Sbjct: 18 CLACARYFIDSTNLKTHFRSKDHK 41

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	405
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.37
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.31
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.79
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.78
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.72
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.72
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.71
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.65
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.59
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.55
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.54
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.54
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.5
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.5
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.46
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.46
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.41
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.38
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.38
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.27
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.24
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.23
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.21
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.2
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.17
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.16
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.15
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.14
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.05
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.0
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.95
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.94
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.9
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.84
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.8
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.68
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.55
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.52
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.51
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.49
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.48
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.36
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.29
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.22
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.18
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.13
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.08
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.04
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.04
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.98
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.94
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.92
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.87
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.77
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.64
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.54
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.41
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.41
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.36
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.3
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.22
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.05
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.03
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.92
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.8
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.55
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.41
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.36
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.1
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.84
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.63
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.56
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.47
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.44
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.44
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.37
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	93.66
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.42
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.4
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	93.24
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.93
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.02
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.99
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	91.86
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.71
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.26
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.51
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	90.23
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	88.89
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	88.63
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	88.1
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.85
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	86.36
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	86.15
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	85.79
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	85.49
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	85.3
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.16
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	84.97
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	83.38
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	83.31
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.75

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=8.2e-14  Score=100.78  Aligned_cols=53  Identities=15%  Similarity=0.161  Sum_probs=41.0

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhh
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEE   98 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h   98 (405)
                      ||+|+|+ |||+|.++.+|.+|+++|.++++            |.|.+||+.|...+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekp------------y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP------------YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCS------------EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccC------------CcCCCcCCEecCHHHHHHHHhcC
Confidence            6778884 88888888888888777777665            77778888888888888887765

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=4e-13  Score=97.04  Aligned_cols=48  Identities=23%  Similarity=0.521  Sum_probs=45.2

Q ss_pred             Cccc-ccccCcccCChhHHHHHhh----cCcccccccccCCCChhhHHHHhhhh
Q 015552           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        10 eKp~-C~~CgK~F~~ks~Lk~H~R----EKPfkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      ||.| |+ |||.|..+..|++|++    ||+|+|.+||++|.+.++|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6788 95 9999999999999999    99999999999999999999999765

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=5.7e-10  Score=70.24  Aligned_cols=28  Identities=21%  Similarity=0.589  Sum_probs=26.0

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      ||||+|.+|+|+|.++++|.+|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7999999999999999999999998875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=8.8e-10  Score=74.64  Aligned_cols=34  Identities=24%  Similarity=0.382  Sum_probs=29.1

Q ss_pred             cCcccccccccCCCChhhHHHHhh-hhcccccccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKV   66 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r-~hH~ekp~~c   66 (405)
                      +|||+|.+|||+|.++++|++|++ +|.++++|+|
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            689999999999999999999986 5778887444

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.78  E-value=1.2e-09  Score=69.37  Aligned_cols=29  Identities=21%  Similarity=0.494  Sum_probs=26.7

Q ss_pred             CcccccccccCCCChhhHHHHhhhhcccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |||+|.+|+|+|.++++|++|+|+|++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            78999999999999999999999998875

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=1.6e-09  Score=72.96  Aligned_cols=29  Identities=24%  Similarity=0.503  Sum_probs=21.0

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      ||||+|.+|||+|.+.++|.+|+|+|++|
T Consensus        10 ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          10 RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            77777777777777777777777766654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.7e-09  Score=67.64  Aligned_cols=29  Identities=21%  Similarity=0.532  Sum_probs=25.9

Q ss_pred             CcccccccccCCCChhhHHHHhhhhcccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |+|.|.+|+|+|.++++|.+|+|+|++|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999888874

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2e-09  Score=70.22  Aligned_cols=32  Identities=25%  Similarity=0.363  Sum_probs=27.3

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |..||||+|.+|||+|.++++|.+|+|+|++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            55588999999999999999999998888765

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=2.2e-09  Score=71.42  Aligned_cols=33  Identities=24%  Similarity=0.520  Sum_probs=27.8

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |..||||+|.+|||+|.++++|++|+++|+.++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            555899999999999999999999998887654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=5e-09  Score=69.65  Aligned_cols=33  Identities=39%  Similarity=0.906  Sum_probs=28.7

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhcccc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |..||||+|.+|+|+|.++++|++|++++|+++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            555899999999999999999999988888764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.3e-08  Score=68.70  Aligned_cols=32  Identities=31%  Similarity=0.627  Sum_probs=29.0

Q ss_pred             CCccc-ccccCcccCChhHHHHHhh-----cCcccccc
Q 015552            9 SSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHV   40 (405)
Q Consensus         9 geKp~-C~~CgK~F~~ks~Lk~H~R-----EKPfkC~~   40 (405)
                      .+|+| |.+|||.|.++++|++|++     ||||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            46788 9999999999999999976     99999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.54  E-value=1.1e-08  Score=67.48  Aligned_cols=28  Identities=21%  Similarity=0.465  Sum_probs=24.8

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhcc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      ||||+|.+|+|.|.++++|++|+|+|..
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CccccCCCCCCcccChHHHHHHccccCC
Confidence            8999999999999999999999877654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=9.6e-09  Score=63.26  Aligned_cols=26  Identities=31%  Similarity=0.503  Sum_probs=23.0

Q ss_pred             CcccccccccCCCChhhHHHHhhhhc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      |||+|..|||+|.++++|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            78999999999999999999988774

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2e-08  Score=67.38  Aligned_cols=37  Identities=14%  Similarity=-0.000  Sum_probs=34.0

Q ss_pred             HHhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           53 IHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        53 rH~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +|+++|.++++            |+|++|||.|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekp------------y~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRR------------YKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCS------------SBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCC------------EecCCCCceeeCHHHHHHhCccCCCC
Confidence            68888888876            99999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.50  E-value=2e-08  Score=67.07  Aligned_cols=30  Identities=23%  Similarity=0.474  Sum_probs=22.7

Q ss_pred             HhhcCcccccccccCCCChhhHHHHhhhhc
Q 015552           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        30 H~REKPfkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      |..||||+|.+|+|+|.++++|.+|+++|.
T Consensus         6 HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           6 STGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             cCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            333888888888888888888888877664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=3.3e-08  Score=62.95  Aligned_cols=28  Identities=29%  Similarity=0.478  Sum_probs=25.3

Q ss_pred             Ccccccc--cccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |||+|.+  |+|+|.++++|++|+|+|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            7899998  999999999999999888875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.46  E-value=7.6e-09  Score=72.74  Aligned_cols=37  Identities=19%  Similarity=0.359  Sum_probs=29.0

Q ss_pred             HHHHHhh---cCcccccc--cccCCCChhhHHHHhhhhcccc
Q 015552           26 ILVQHQK---AKHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        26 ~Lk~H~R---EKPfkC~~--CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      .|.+|++   ||+|+|.+  |+|+|.++++|++|+++|++|+
T Consensus         6 ~l~~h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhhccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4455555   88888877  8888888888888888888764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=3.3e-08  Score=62.98  Aligned_cols=28  Identities=29%  Similarity=0.500  Sum_probs=25.4

Q ss_pred             Ccccccc--cccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |||+|.+  |+|+|.++++|++|+|+|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            7899988  999999999999999988875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=6.8e-08  Score=61.94  Aligned_cols=29  Identities=21%  Similarity=0.447  Sum_probs=25.6

Q ss_pred             Ccccccc--cccCCCChhhHHHHhhhhcccc
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |||+|.+  |+|+|.+.++|++|+|+|++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899975  9999999999999999988875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.38  E-value=7.5e-08  Score=62.14  Aligned_cols=29  Identities=14%  Similarity=0.391  Sum_probs=26.1

Q ss_pred             cCcccccc--cccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~--CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      ||||.|.+  |+|+|++.++|++|+++|..+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            79999998  999999999999999887653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.3e-07  Score=62.69  Aligned_cols=31  Identities=16%  Similarity=0.238  Sum_probs=26.8

Q ss_pred             ccccc--cccCCCChhhHHHHhhhhcccccccc
Q 015552           36 FKCHV--CHKKLSTAGGMAIHVLQVHKENVTKV   66 (405)
Q Consensus        36 fkC~~--CgKsFs~~s~L~rH~r~hH~ekp~~c   66 (405)
                      |+|.+  |+|+|.++++|++|+|+|.+++++.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            77887  99999999999999999999988555

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=2.2e-07  Score=55.16  Aligned_cols=26  Identities=27%  Similarity=0.409  Sum_probs=22.6

Q ss_pred             cccccccccCCCChhhHHHHhhhhcc
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      |++|.+|+|.|++++.|+.|+|.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999987764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2.2e-07  Score=61.47  Aligned_cols=35  Identities=9%  Similarity=-0.042  Sum_probs=30.8

Q ss_pred             hhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           56 LQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        56 r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      |+|++|++            |+|.+||+.|...+.|..|+++|++++
T Consensus         1 R~HTgekP------------y~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKP------------YACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCC------------EECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCC------------EECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            46777776            999999999999999999999998763

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.21  E-value=3e-07  Score=61.15  Aligned_cols=35  Identities=11%  Similarity=-0.174  Sum_probs=31.8

Q ss_pred             HhhhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcC
Q 015552           54 HVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        54 H~r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      |.|.|++|++            |+|.+|++.|.+++.|.+|+++|.+
T Consensus         2 h~R~HTgeKP------------y~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKP------------FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSS------------BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccC------------eEeCCCCCEecCHHHHHHHHhcCcC
Confidence            6788998887            9999999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=1.8e-07  Score=58.99  Aligned_cols=27  Identities=19%  Similarity=0.565  Sum_probs=24.2

Q ss_pred             Ccccccc--cccCCCChhhHHHHhhhhcc
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~r~hH~   60 (405)
                      |||+|.+  |+|+|.+.++|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            7899988  99999999999999988864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=2.7e-07  Score=57.65  Aligned_cols=26  Identities=23%  Similarity=0.629  Sum_probs=23.6

Q ss_pred             Ccccccc--cccCCCChhhHHHHhhhhc
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~r~hH   59 (405)
                      |||+|.+  |||+|.+.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7899998  9999999999999998774

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=3.9e-07  Score=59.11  Aligned_cols=26  Identities=15%  Similarity=0.022  Sum_probs=25.1

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcCC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      |+|.+||+.|.+.+.|..|+++|+||
T Consensus         8 y~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           8 YGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             EECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             eeCCCCCCEeCchHHhHhhccccCCC
Confidence            99999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.15  E-value=6e-07  Score=56.53  Aligned_cols=28  Identities=21%  Similarity=0.144  Sum_probs=26.3

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      +|.|.+|++.|.+.+.|.+|+++|+||+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            4999999999999999999999999974

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=6.4e-07  Score=56.41  Aligned_cols=28  Identities=11%  Similarity=0.027  Sum_probs=26.3

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      +|.|.+||+.|.++++|.+|+++|.+|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            4999999999999999999999999874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.05  E-value=7.3e-07  Score=54.43  Aligned_cols=27  Identities=22%  Similarity=0.453  Sum_probs=23.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      ||||.|.+||++|.+.+..++|.+.|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            789999999999999999999987663

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=9.7e-07  Score=55.10  Aligned_cols=27  Identities=15%  Similarity=0.036  Sum_probs=25.0

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhcC
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      ++|+|.+|++.|.+++.|.+|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            349999999999999999999999975

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=1.5e-06  Score=57.35  Aligned_cols=34  Identities=12%  Similarity=0.011  Sum_probs=28.8

Q ss_pred             hhhccccccccCCCCCCCCccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           56 LQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        56 r~hH~ekp~~cp~~kpgRk~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      |+|++|++            |.|++|++.|.++++|.+|++.++++
T Consensus         1 R~HTgekP------------~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKP------------YECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCS------------EECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCC------------EeCCCCcccccchHHHHHHcccccCC
Confidence            46777776            99999999999999999998776654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.94  E-value=1.8e-06  Score=56.61  Aligned_cols=29  Identities=10%  Similarity=-0.082  Sum_probs=26.0

Q ss_pred             CCccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           73 RESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        73 Rk~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +++|+|.+|++.|.+.++|.+|+++|.++
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CccccCCCCCCcccChHHHHHHccccCCc
Confidence            34499999999999999999999999864

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.90  E-value=7.2e-07  Score=62.37  Aligned_cols=42  Identities=10%  Similarity=-0.007  Sum_probs=35.8

Q ss_pred             hhhHHHHhhhhccccccccCCCCCCCCcccccc--CCCCCCChHHHHHHHhhhcCCC
Q 015552           48 AGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        48 ~s~L~rH~r~hH~ekp~~cp~~kpgRk~~~C~i--Cgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      ++.|.+|+ .|.++++            |.|.+  |++.|.+.+.|.+|+++|.+|+
T Consensus         4 ~~~l~~h~-~h~gekp------------y~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYV-KEMPDKT------------FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSC-EEETTTE------------EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchh-hccCCCC------------eECCcCCCCccccCchHHHhhcccccCCC
Confidence            45678887 5888877            88876  9999999999999999999874

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=3.1e-06  Score=55.79  Aligned_cols=28  Identities=29%  Similarity=0.651  Sum_probs=25.7

Q ss_pred             cccc--cCcccCChhHHHHHhh----cCcccccc
Q 015552           13 WCYY--CDREFDDEKILVQHQK----AKHFKCHV   40 (405)
Q Consensus        13 ~C~~--CgK~F~~ks~Lk~H~R----EKPfkC~~   40 (405)
                      .|.+  |+|+|.++++|++|++    ||||+|..
T Consensus         3 ~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           3 SCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             ECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             ECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            3887  9999999999999999    99999973

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=3.2e-06  Score=51.75  Aligned_cols=25  Identities=12%  Similarity=-0.133  Sum_probs=23.4

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhc
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      +|+|.+|||.|.+.+.|.+|+++|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCCC
Confidence            4999999999999999999999984

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.3e-05  Score=50.63  Aligned_cols=27  Identities=11%  Similarity=0.023  Sum_probs=24.8

Q ss_pred             cccccc--CCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~i--Cgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +|.|..  |+|.|.+.+.|++|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            388977  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=1.3e-05  Score=50.55  Aligned_cols=27  Identities=11%  Similarity=-0.049  Sum_probs=24.5

Q ss_pred             cccccc--CCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEI--YGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~i--Cgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +|.|.+  |++.|.+.+.|.+|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            388866  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.8e-05  Score=49.37  Aligned_cols=27  Identities=19%  Similarity=0.043  Sum_probs=24.6

Q ss_pred             ccc--ccCCCCCCChHHHHHHHhhhcCCC
Q 015552           76 TDI--EIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        76 ~~C--~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      |.|  +.|++.|.+.++|.+|+++|++|+
T Consensus         3 f~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            778  579999999999999999999874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=1.8e-05  Score=47.73  Aligned_cols=28  Identities=21%  Similarity=0.348  Sum_probs=21.7

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |-+.|..|||.|...+.|+||+..|++|
T Consensus         1 r~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           1 RVHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             CcchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            3467888888888888888888666553

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=1.8e-05  Score=47.97  Aligned_cols=29  Identities=17%  Similarity=0.527  Sum_probs=25.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      ||||+|+.|...-...+.|..|+|+|+++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            68999999998888889999999888763

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=1.9e-05  Score=48.86  Aligned_cols=29  Identities=24%  Similarity=0.484  Sum_probs=24.3

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      ||||.|.+|+.+|.+++.+.-|.|.|-+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68899999999999999888888777654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.36  E-value=4.2e-05  Score=48.90  Aligned_cols=23  Identities=30%  Similarity=0.749  Sum_probs=21.6

Q ss_pred             Cccc-ccc--cCcccCChhHHHHHhh
Q 015552           10 SKVW-CYY--CDREFDDEKILVQHQK   32 (405)
Q Consensus        10 eKp~-C~~--CgK~F~~ks~Lk~H~R   32 (405)
                      ||+| |.+  |+|.|.+.++|++|++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r   26 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhh
Confidence            6788 998  9999999999999998

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=4.3e-05  Score=48.26  Aligned_cols=29  Identities=21%  Similarity=0.363  Sum_probs=16.5

Q ss_pred             cccccccccCCCChhhHHHHhhhhccccc
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~hH~ekp   63 (405)
                      ...|..|||.|..-.+|.||...|.+||+
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            34555566666666666666555555554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=9.7e-05  Score=43.59  Aligned_cols=25  Identities=20%  Similarity=0.110  Sum_probs=23.1

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      .+|+.|+|.|.+++.|+.|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            5799999999999999999999975

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=5.9e-05  Score=46.41  Aligned_cols=27  Identities=30%  Similarity=0.677  Sum_probs=23.0

Q ss_pred             Ccccccc--cccCCCChhhHHHHhhhhcc
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~r~hH~   60 (405)
                      |||.|.+  |+|+++..++|++|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6888888  88999999999999887775

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=7e-05  Score=46.78  Aligned_cols=26  Identities=8%  Similarity=-0.080  Sum_probs=23.2

Q ss_pred             cccccc--CCCCCCChHHHHHHHhhhcC
Q 015552           75 STDIEI--YGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        75 ~~~C~i--Cgk~F~~~s~L~~H~r~h~~  100 (405)
                      +|.|.+  |+|.|.+.++|.+|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            388865  99999999999999999975

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.08  E-value=0.00013  Score=43.26  Aligned_cols=26  Identities=27%  Similarity=0.489  Sum_probs=22.8

Q ss_pred             cccccccCCCChhhHHHHhhhhcccc
Q 015552           37 KCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        37 kC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      .|..|+|+|.++..|+.|-|.|++|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58899999999999999998888774

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.04  E-value=0.00014  Score=44.18  Aligned_cols=26  Identities=15%  Similarity=0.023  Sum_probs=23.7

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhc
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      ++|.|++||+.|.+++..++|.+.|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            34999999999999999999999885

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00017  Score=44.03  Aligned_cols=29  Identities=17%  Similarity=0.559  Sum_probs=25.5

Q ss_pred             CcccccccccCCCChhhHHHHhhhhcccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |||.|++|..+....++|+.|+++.|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            68999999999999999999998888653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.98  E-value=0.00019  Score=41.99  Aligned_cols=23  Identities=17%  Similarity=0.531  Sum_probs=19.3

Q ss_pred             ccccccccCCCChhhHHHHhhhh
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      |+|-.|.++|..++.|.+|+|.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            68889999999999999998554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.94  E-value=0.00014  Score=45.09  Aligned_cols=28  Identities=18%  Similarity=0.554  Sum_probs=24.6

Q ss_pred             cccccccccCCCChhhHHHHhhhhcccc
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      ||.|.+|++.|.+++.|.||++.-|+..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6899999999999999999987777654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00016  Score=45.63  Aligned_cols=32  Identities=25%  Similarity=0.110  Sum_probs=28.8

Q ss_pred             CCccccccCCCCCCChHHHHHHHhhhcCCCcc
Q 015552           73 RESTDIEIYGMQGIPPDVLAAHYGEEEEEVPS  104 (405)
Q Consensus        73 Rk~~~C~iCgk~F~~~s~L~~H~r~h~~e~~~  104 (405)
                      |+...|++|||.|.+--.|.+|...|.+|+++
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            45588999999999999999999999998865

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00016  Score=44.69  Aligned_cols=24  Identities=8%  Similarity=-0.101  Sum_probs=21.7

Q ss_pred             ccccc--CCCCCCChHHHHHHHhhhc
Q 015552           76 TDIEI--YGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        76 ~~C~i--Cgk~F~~~s~L~~H~r~h~   99 (405)
                      |.|..  |||.|.+.++|++|+++|+
T Consensus         3 f~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           3 YVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             cCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            77865  9999999999999999984

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00024  Score=43.20  Aligned_cols=28  Identities=21%  Similarity=0.576  Sum_probs=24.9

Q ss_pred             CcccccccccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |||+|.+|.-.-.+.++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            6899999998889999999999888864

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00032  Score=41.98  Aligned_cols=27  Identities=19%  Similarity=0.442  Sum_probs=21.7

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      .|||+|..|+..-...+.|..|+|.|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            378888888888888888888887663

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.54  E-value=0.0004  Score=42.21  Aligned_cols=28  Identities=29%  Similarity=0.523  Sum_probs=24.2

Q ss_pred             Ccccccc--cccCCCChhhHHHHhhhhccc
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |||.|..  |.|.|.+..+|.||..+|++|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            6888987  999999999999998777764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00083  Score=40.61  Aligned_cols=26  Identities=12%  Similarity=0.301  Sum_probs=19.1

Q ss_pred             ccccccccCCCChhhHHHHhhhhccc
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |.|.+||......+-|+.|+|.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777665

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00049  Score=45.61  Aligned_cols=23  Identities=26%  Similarity=0.650  Sum_probs=20.3

Q ss_pred             cCcccccccccCCCChhhHHHHh
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHV   55 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~   55 (405)
                      .|||.|.+|+|+|-.++++.||.
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhh
Confidence            37899999999999999999995

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.36  E-value=0.00057  Score=41.30  Aligned_cols=25  Identities=20%  Similarity=0.406  Sum_probs=20.1

Q ss_pred             Ccccccc--cccCCCChhhHHHHhhhh
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~r~h   58 (405)
                      .||+|..  |+|+|+..+.|+||.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788876  888888888888887554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.00092  Score=41.14  Aligned_cols=28  Identities=11%  Similarity=0.172  Sum_probs=25.5

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +.|+|.+|+..|.+++-+.-|.+.|+|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            3499999999999999999999999875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.00099  Score=39.92  Aligned_cols=26  Identities=15%  Similarity=-0.021  Sum_probs=23.6

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcCC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      .-|.+|||.|+..+.|++|...|++|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45899999999999999999999875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0011  Score=40.05  Aligned_cols=24  Identities=21%  Similarity=0.566  Sum_probs=17.8

Q ss_pred             cccccccccCCCChhhHHHHhhhh
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      ||.|..|.-.|.++.+|..|++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            577778888888888888777543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.03  E-value=0.0012  Score=43.06  Aligned_cols=29  Identities=14%  Similarity=0.535  Sum_probs=22.4

Q ss_pred             CcccccccccCCCChhhHHHHhhhhcccc
Q 015552           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (405)
Q Consensus        34 KPfkC~~CgKsFs~~s~L~rH~r~hH~ek   62 (405)
                      |.|+|.+|+|.|.+-..|--|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            56888888888888888888886665443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.92  E-value=0.0018  Score=38.51  Aligned_cols=22  Identities=23%  Similarity=0.369  Sum_probs=18.5

Q ss_pred             cccccccccCCCChhhHHHHhh
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVL   56 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r   56 (405)
                      ||+|..|||.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6888889998888888888863

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.0013  Score=40.75  Aligned_cols=26  Identities=31%  Similarity=0.464  Sum_probs=20.6

Q ss_pred             Ccccccc--cccCCCChhhHHHHh-hhhc
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHV-LQVH   59 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~-r~hH   59 (405)
                      |||.|.+  |.|.|+..+.-..|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            6888888  888888888888887 5543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.55  E-value=0.0022  Score=41.71  Aligned_cols=26  Identities=23%  Similarity=0.580  Sum_probs=20.4

Q ss_pred             cCcccccc--cccCCCChhhHHHHhhhh
Q 015552           33 AKHFKCHV--CHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        33 EKPfkC~~--CgKsFs~~s~L~rH~r~h   58 (405)
                      +|||.|..  |+.+|...++|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            68888865  888888888888886444

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0062  Score=36.68  Aligned_cols=27  Identities=19%  Similarity=0.227  Sum_probs=25.0

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      |-|..||......+.|+.|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999863

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.36  E-value=0.0033  Score=37.97  Aligned_cols=29  Identities=21%  Similarity=0.539  Sum_probs=21.5

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      |.-|.|.+|...|.++-.|..|+..|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34577888888888888888887666653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.10  E-value=0.0081  Score=34.88  Aligned_cols=24  Identities=8%  Similarity=0.025  Sum_probs=22.0

Q ss_pred             cccccCCCCCCChHHHHHHHhhhc
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      |+|..|.+.|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            679999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.84  E-value=0.011  Score=34.76  Aligned_cols=26  Identities=12%  Similarity=0.029  Sum_probs=24.1

Q ss_pred             ccccCCCCCCChHHHHHHHhhhcCCC
Q 015552           77 DIEIYGMQGIPPDVLAAHYGEEEEEV  102 (405)
Q Consensus        77 ~C~iCgk~F~~~s~L~~H~r~h~~e~  102 (405)
                      +|..|.|.|..+-.|+.|-+.|.||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68999999999999999999999874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.007  Score=39.92  Aligned_cols=24  Identities=13%  Similarity=0.086  Sum_probs=21.0

Q ss_pred             CccccccCCCCCCChHHHHHHHhh
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGE   97 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~   97 (405)
                      ++|+|.+|+|.|..++.+.+|...
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhhhh
Confidence            449999999999999999999643

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.56  E-value=0.0064  Score=35.42  Aligned_cols=24  Identities=29%  Similarity=0.733  Sum_probs=18.6

Q ss_pred             ccccccccCCCChhhHHHHhhhhc
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQVH   59 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~hH   59 (405)
                      |.|.+|-|.|.+++++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            568888888888888888876655

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.47  E-value=0.0083  Score=36.62  Aligned_cols=25  Identities=12%  Similarity=0.040  Sum_probs=21.8

Q ss_pred             ccccc--CCCCCCChHHHHHHHhhhcC
Q 015552           76 TDIEI--YGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        76 ~~C~i--Cgk~F~~~s~L~~H~r~h~~  100 (405)
                      |.|.+  |+|++.+.+.|+.|++.++|
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            77764  99999999999999998764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.0058  Score=38.63  Aligned_cols=24  Identities=29%  Similarity=0.509  Sum_probs=20.3

Q ss_pred             cccccccccCCCChhhHHHHhhhh
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      .|.|.+|+|+|.++..+.||-...
T Consensus         4 afvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeeecccccchhcchHHHHHhhhc
Confidence            488999999999999999996433

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.0092  Score=35.78  Aligned_cols=28  Identities=11%  Similarity=0.119  Sum_probs=25.0

Q ss_pred             CccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           74 ESTDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        74 k~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +.|+|..|...-.+.+.|..|++.|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            3499999999999999999999999874

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.37  E-value=0.0091  Score=35.98  Aligned_cols=21  Identities=33%  Similarity=0.776  Sum_probs=19.6

Q ss_pred             cc-ccccCcccCChhHHHHHhh
Q 015552           12 VW-CYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        12 p~-C~~CgK~F~~ks~Lk~H~R   32 (405)
                      +| |.+|+-.|..+.+|.+|++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            35 9999999999999999998

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.66  E-value=0.019  Score=34.76  Aligned_cols=22  Identities=36%  Similarity=0.682  Sum_probs=20.2

Q ss_pred             ccc-ccccCcccCChhHHHHHhh
Q 015552           11 KVW-CYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        11 Kp~-C~~CgK~F~~ks~Lk~H~R   32 (405)
                      |+| |++|...-.+.++|+.|++
T Consensus         1 kpy~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhh
Confidence            467 9999999999999999998

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.42  E-value=0.018  Score=34.19  Aligned_cols=25  Identities=8%  Similarity=0.040  Sum_probs=23.1

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhc
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      +++|+.|...-.+.+.|..|+|+|.
T Consensus         3 p~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CcccccccchhcchhhHhhhhhccc
Confidence            3999999999999999999999985

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.40  E-value=0.015  Score=33.70  Aligned_cols=21  Identities=19%  Similarity=0.626  Sum_probs=15.0

Q ss_pred             cccccccccCCCChhhHHHHh
Q 015552           35 HFKCHVCHKKLSTAGGMAIHV   55 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~   55 (405)
                      ||+|..|...|-++..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            567777777777777777775

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.24  E-value=0.023  Score=36.82  Aligned_cols=29  Identities=10%  Similarity=0.053  Sum_probs=25.7

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCCCc
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEEVP  103 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e~~  103 (405)
                      .|+|.+|++.|..-..|--|++.|..++.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             ccCCCCCCCccCCcccccchHhhhcchHH
Confidence            49999999999999999999999976543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.93  E-value=0.022  Score=34.14  Aligned_cols=23  Identities=17%  Similarity=-0.012  Sum_probs=20.2

Q ss_pred             ccc--ccCCCCCCChHHHHHHHhhh
Q 015552           76 TDI--EIYGMQGIPPDVLAAHYGEE   98 (405)
Q Consensus        76 ~~C--~iCgk~F~~~s~L~~H~r~h   98 (405)
                      |+|  +.|+|.|...+.|++|++.|
T Consensus         4 y~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           4 YECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             ccCCccCccccccCHHHHhhhhhcc
Confidence            555  68999999999999999987

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.02  E-value=0.019  Score=42.09  Aligned_cols=26  Identities=31%  Similarity=0.452  Sum_probs=18.4

Q ss_pred             cccccccCcccCChhHHHHHhhcCcc
Q 015552           11 KVWCYYCDREFDDEKILVQHQKAKHF   36 (405)
Q Consensus        11 Kp~C~~CgK~F~~ks~Lk~H~REKPf   36 (405)
                      .+||..|+|.|.....|..|++.|.|
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ksKkH   40 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRSKDH   40 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTCHHH
T ss_pred             EEecccccCccCCHHHHHHHHcccHH
Confidence            46677788888877777777774443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.99  E-value=0.046  Score=37.10  Aligned_cols=25  Identities=12%  Similarity=0.036  Sum_probs=22.8

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      |.|-+|||.|.+...|++|+..|.-
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeccccccccCCHHHHhHhHHhcCc
Confidence            8899999999999999999988853

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=91.86  E-value=0.038  Score=33.93  Aligned_cols=25  Identities=12%  Similarity=-0.001  Sum_probs=22.0

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEE  100 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~  100 (405)
                      |.|.+|++.|.+++.|-+|.+.-++
T Consensus         2 f~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             cccccccchhhHHHHHHHHHHHHhc
Confidence            8899999999999999999876544

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.71  E-value=0.033  Score=35.13  Aligned_cols=29  Identities=21%  Similarity=0.599  Sum_probs=23.9

Q ss_pred             cCcccccccccCCCChhhHHHHhhhhccc
Q 015552           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        33 EKPfkC~~CgKsFs~~s~L~rH~r~hH~e   61 (405)
                      +.-|+|.+|.+.+...+++.||..+.|+.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            34589999999999999999998766654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.26  E-value=0.056  Score=34.05  Aligned_cols=19  Identities=11%  Similarity=0.181  Sum_probs=12.5

Q ss_pred             cCCCChhhHHHHhhhhccc
Q 015552           43 KKLSTAGGMAIHVLQVHKE   61 (405)
Q Consensus        43 KsFs~~s~L~rH~r~hH~e   61 (405)
                      +.|..+..|..|+|.|++|
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3466777777777766654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.51  E-value=0.062  Score=36.47  Aligned_cols=24  Identities=25%  Similarity=0.444  Sum_probs=19.8

Q ss_pred             cccccccccCCCChhhHHHHhhhh
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      -|.|-.|||.|.....|++|.-+|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            367999999999999999997554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.23  E-value=0.069  Score=31.99  Aligned_cols=26  Identities=12%  Similarity=-0.123  Sum_probs=24.4

Q ss_pred             cccccCCCCCCChHHHHHHHhhhcCC
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      |.|..|...|.++-.|+.|+-.|.|+
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccCC
Confidence            88999999999999999999999875

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.89  E-value=0.091  Score=33.86  Aligned_cols=25  Identities=24%  Similarity=0.061  Sum_probs=22.2

Q ss_pred             cccc--ccCCCCCCChHHHHHHHhhhc
Q 015552           75 STDI--EIYGMQGIPPDVLAAHYGEEE   99 (405)
Q Consensus        75 ~~~C--~iCgk~F~~~s~L~~H~r~h~   99 (405)
                      +|.|  ..|+++|...+.|..|++.|+
T Consensus         6 PF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           6 PFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             ceecCCCCccccccchHHHHHhhhhhe
Confidence            3778  679999999999999999886

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.63  E-value=0.15  Score=30.09  Aligned_cols=22  Identities=14%  Similarity=0.034  Sum_probs=19.7

Q ss_pred             cccccCCCCCCChHHHHHHHhh
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGE   97 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~   97 (405)
                      |+|..|||.+.++++|..|+..
T Consensus         2 f~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHHHH
Confidence            8899999999999999999753

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.10  E-value=0.13  Score=30.49  Aligned_cols=24  Identities=25%  Similarity=0.333  Sum_probs=17.0

Q ss_pred             cccccccccCCCChhhHHHHhhhh
Q 015552           35 HFKCHVCHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        35 PfkC~~CgKsFs~~s~L~rH~r~h   58 (405)
                      |-||..|..+.+.+..|+.|.|.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            446777777777777777777655

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.85  E-value=0.11  Score=30.46  Aligned_cols=18  Identities=17%  Similarity=0.444  Sum_probs=10.7

Q ss_pred             cccCCCChhhHHHHhhhh
Q 015552           41 CHKKLSTAGGMAIHVLQV   58 (405)
Q Consensus        41 CgKsFs~~s~L~rH~r~h   58 (405)
                      |+|.|.....|+.|+.+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            666666666666665443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.36  E-value=0.079  Score=32.50  Aligned_cols=26  Identities=15%  Similarity=-0.132  Sum_probs=21.4

Q ss_pred             cccc--cCCCCCCChHHHHHHH-hhhcCC
Q 015552           76 TDIE--IYGMQGIPPDVLAAHY-GEEEEE  101 (405)
Q Consensus        76 ~~C~--iCgk~F~~~s~L~~H~-r~h~~e  101 (405)
                      |.|+  .|.|.|...++...|+ |+|..|
T Consensus         3 Y~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           3 YMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             EECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             ccccCCChhhhhcchhhhhhhccccccCC
Confidence            7776  4999999999999996 788653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.15  E-value=0.18  Score=30.22  Aligned_cols=27  Identities=11%  Similarity=0.147  Sum_probs=23.3

Q ss_pred             ccccccCCCCCCChHHHHHHHhhhcCC
Q 015552           75 STDIEIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        75 ~~~C~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      +|+|..|...-.+.++|..|++.-+++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CcccceecccccCcchHHHHHHHHccC
Confidence            489999998889999999999876653

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.79  E-value=0.17  Score=31.73  Aligned_cols=21  Identities=19%  Similarity=0.591  Sum_probs=18.8

Q ss_pred             ccccccCcccCChhHHHHHhh
Q 015552           12 VWCYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        12 p~C~~CgK~F~~ks~Lk~H~R   32 (405)
                      +.|..|+|.|.++..+.+|..
T Consensus         5 fvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHhh
Confidence            449999999999999999975

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.49  E-value=0.27  Score=29.41  Aligned_cols=25  Identities=44%  Similarity=0.911  Sum_probs=19.5

Q ss_pred             ccccccccCCCChhhHHHHhhhhcc
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~hH~   60 (405)
                      |.|..|||.+.+...++-|+...|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            7788888888888888888755443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.30  E-value=0.21  Score=29.46  Aligned_cols=22  Identities=18%  Similarity=0.661  Sum_probs=11.4

Q ss_pred             ccccccccCCCChhhHHHHhhh
Q 015552           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (405)
Q Consensus        36 fkC~~CgKsFs~~s~L~rH~r~   57 (405)
                      |.|..|+....+++.|..|+|.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            4455555555555555555443

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.16  E-value=0.2  Score=29.99  Aligned_cols=27  Identities=30%  Similarity=0.675  Sum_probs=20.8

Q ss_pred             Ccccccc--cccCCCChhhHHHHhhhhcc
Q 015552           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (405)
Q Consensus        34 KPfkC~~--CgKsFs~~s~L~rH~r~hH~   60 (405)
                      |-|+|..  |+-+|.++.+++.|..+.|.
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhhcc
Confidence            4577774  88899999999988766654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.97  E-value=0.21  Score=28.69  Aligned_cols=22  Identities=14%  Similarity=-0.013  Sum_probs=20.1

Q ss_pred             cccccCCCCCCChHHHHHHHhh
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGE   97 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~   97 (405)
                      |+|..|...|.++.+|..|+-.
T Consensus         3 ykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHh
Confidence            8999999999999999999754

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.38  E-value=0.23  Score=29.28  Aligned_cols=22  Identities=27%  Similarity=0.410  Sum_probs=18.4

Q ss_pred             cccccccCcccCChhHHHHHhh
Q 015552           11 KVWCYYCDREFDDEKILVQHQK   32 (405)
Q Consensus        11 Kp~C~~CgK~F~~ks~Lk~H~R   32 (405)
                      |+.|.+|+....+++.|..|.|
T Consensus         2 k~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhh
Confidence            4568999988889999988876

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.31  E-value=0.28  Score=28.30  Aligned_cols=23  Identities=13%  Similarity=-0.130  Sum_probs=20.7

Q ss_pred             cccccCCCCCCChHHHHHHHhhh
Q 015552           76 TDIEIYGMQGIPPDVLAAHYGEE   98 (405)
Q Consensus        76 ~~C~iCgk~F~~~s~L~~H~r~h   98 (405)
                      |.|..|-|.|.+++++..|.++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            67999999999999999998764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.75  E-value=0.29  Score=29.26  Aligned_cols=26  Identities=15%  Similarity=-0.141  Sum_probs=22.3

Q ss_pred             ccc--ccCCCCCCChHHHHHHHhhhcCC
Q 015552           76 TDI--EIYGMQGIPPDVLAAHYGEEEEE  101 (405)
Q Consensus        76 ~~C--~iCgk~F~~~s~L~~H~r~h~~e  101 (405)
                      |.|  +.|.|.|..--.|.+|..+|.+|
T Consensus         3 fpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           3 FPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             EECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             cCcccccccccchhhhhhhhhhccccCC
Confidence            555  57999999999999999999875