Query 015555
Match_columns 405
No_of_seqs 143 out of 165
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 14:39:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015555.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015555hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 89.8 0.64 2.2E-05 40.7 6.6 118 184-324 87-214 (255)
2 1xhb_A Polypeptide N-acetylgal 72.9 5.6 0.00019 38.8 6.3 39 184-222 113-151 (472)
3 2ffu_A Ppgalnact-2, polypeptid 67.3 6.6 0.00023 38.9 5.5 40 183-222 144-183 (501)
4 3bcv_A Putative glycosyltransf 66.8 4.2 0.00014 34.9 3.6 109 108-221 4-120 (240)
5 3f1y_A Mannosyl-3-phosphoglyce 59.4 9.1 0.00031 37.7 4.8 196 108-324 93-309 (387)
6 4fix_A UDP-galactofuranosyl tr 55.3 25 0.00085 37.1 7.5 37 185-221 268-305 (657)
7 2z86_A Chondroitin synthase; G 49.1 8.2 0.00028 39.0 2.6 108 108-220 92-210 (625)
8 2d7i_A Polypeptide N-acetylgal 39.4 76 0.0026 32.3 8.0 209 108-326 111-340 (570)
9 1omz_A Alpha-1,4-N-acetylhexos 37.0 17 0.00057 35.5 2.6 102 108-213 27-134 (293)
10 2z86_A Chondroitin synthase; G 32.6 62 0.0021 32.6 6.0 108 108-220 374-490 (625)
11 2nxv_A ATP synthase subunits r 30.1 32 0.0011 30.8 3.1 29 184-212 73-101 (249)
12 2c0n_A A197; thermophil protei 29.7 19 0.00064 33.7 1.5 39 173-218 44-85 (203)
13 3l7i_A Teichoic acid biosynthe 28.0 12 0.00043 39.0 0.0 36 183-218 81-116 (729)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=89.82 E-value=0.64 Score=40.66 Aligned_cols=118 Identities=9% Similarity=-0.035 Sum_probs=67.1
Q ss_pred CCccEEEEecCccccCCCCHHHHHHHHHHh-CCccccCCc-----CCCCCceeeeeeeeccCcccceeeecccCCcccCC
Q 015555 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPAL-----DPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN 257 (405)
Q Consensus 184 a~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPAL-----d~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~ 257 (405)
+..|||++.|+|..++...+.++++.+.++ +..+..+.. +.+. ...+.. .+ +...+ . .
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~-~~-~~~~~----~------~--- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENR-DIVKET-VR-PAAQV----T------W--- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-EE-CCCSC----B------S---
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCC-cchhhc-cC-chHHH----H------H---
Confidence 578999999999999998999999999876 666665543 2211 111110 00 00000 0 0
Q ss_pred CCCCCCccceEEeeccccChhHHHHHhhhh----ccCCccccchhhhhhhhhcCCCCCeEEEEeeeeEEec
Q 015555 258 ISEGPPCTGFVEGMAPVFSRSAWYCAWHLI----QNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ 324 (405)
Q Consensus 258 ~s~~ppcT~FVEiMAPVFSR~Awrcvw~mi----qNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~ 324 (405)
....++-..+=+|+|++++.+-..+ ..+.....+-|+.+...+.. .+ ++..++...+.|+
T Consensus 151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r 214 (255)
T 1qg8_A 151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNY 214 (255)
T ss_dssp -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEE
T ss_pred -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEE
Confidence 0111222234478999999874223 11222334567665544432 23 5899998888877
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=72.86 E-value=5.6 Score=38.79 Aligned_cols=39 Identities=15% Similarity=0.054 Sum_probs=33.6
Q ss_pred CCccEEEEecCccccCCCCHHHHHHHHHHhCCccccCCc
Q 015555 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPAL 222 (405)
Q Consensus 184 a~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPAL 222 (405)
+..|||+|.|+|..++.-.++++++.+++..-.+.-|.+
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~ 151 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPII 151 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeee
Confidence 578999999999999999999999999887765666654
No 3
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=67.27 E-value=6.6 Score=38.87 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=35.3
Q ss_pred cCCccEEEEecCccccCCCCHHHHHHHHHHhCCccccCCc
Q 015555 183 VSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPAL 222 (405)
Q Consensus 183 va~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPAL 222 (405)
.+..|||+|.|+|..++.-.+.++++.+++..-.+..|.+
T Consensus 144 ~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~ 183 (501)
T 2ffu_A 144 AAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPII 183 (501)
T ss_dssp HCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred hcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeee
Confidence 3578999999999999999999999999988777777765
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=66.82 E-value=4.2 Score=34.92 Aligned_cols=109 Identities=16% Similarity=0.155 Sum_probs=60.2
Q ss_pred CCccEEEEeccCcccccHHHHHhhcC---CCCcEEEEEEeCCCCCccCC-c-CCC--CceeEEE-eeccchhhhhccccC
Q 015555 108 SNRNLLAIPAGIKQKDNVDAIVRKFL---PENFTVILFHYDGDVNAWRG-L-DWS--NKAIHIA-AQNQTKWWFAKRFLH 179 (405)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~---~~nFdv~LFhYDg~vd~W~d-~-~ws--~~aiHv~-a~kqtKWw~akRfLH 179 (405)
.++.-|++|+=.. ...+...|+-.. ..+|.|++.. ||..|+=.+ + ++. ..-+++. ..+..+=.-.+.=+
T Consensus 4 ~p~vsViIp~yn~-~~~l~~~l~Sl~~q~~~~~eiIvvD-d~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~~~a~N~g~- 80 (240)
T 3bcv_A 4 IPKVSVIVPIYNV-EKYLDQCVQALLAQTLSDIEIILID-DESPDNCPKICDDYAAQYPNIKVIHKKNAGLGMACNSGL- 80 (240)
T ss_dssp CCSEEEEEEESSC-TTTHHHHHHHHHTCSSSSEEEEEEE-CCCSSSHHHHHHHHHHHCSSEEEEECCCCCHHHHHHHHH-
T ss_pred CCcEEEEEecCCC-HHHHHHHHHHHHhCcCCCeEEEEEE-CCCCcCHHHHHHHHHhhCCCEEEEECCCCChHHHHHHHH-
Confidence 3556677777433 344444444321 2467777664 666554211 0 000 0113332 22222211111111
Q ss_pred ccccCCccEEEEecCccccCCCCHHHHHHHHHHhCCccccCC
Q 015555 180 PDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPA 221 (405)
Q Consensus 180 Pdiva~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPA 221 (405)
+ .+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 81 -~-~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 81 -D-VATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp -H-HCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred -H-HcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 1 256799999999999999999999999998777766544
No 5
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=59.38 E-value=9.1 Score=37.68 Aligned_cols=196 Identities=12% Similarity=0.072 Sum_probs=98.1
Q ss_pred CCccEEEEeccCcccccHHHHHhhcC------CCCcEEEEEEeCCCCCccCCc--CCCCceeEEE------eeccchhhh
Q 015555 108 SNRNLLAIPAGIKQKDNVDAIVRKFL------PENFTVILFHYDGDVNAWRGL--DWSNKAIHIA------AQNQTKWWF 173 (405)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~------~~nFdv~LFhYDg~vd~W~d~--~ws~~aiHv~------a~kqtKWw~ 173 (405)
.++..|++|+=.. ..++..+|.... ..+|.|++.. ||++|+=.++ +...+.++.. ..++.|-.-
T Consensus 93 ~p~vSVVIP~yNe-~~~l~~~l~sl~~~l~~~~~~~EIIVVD-DgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPSRNV-ADTVGGIIDEIHALNERAPLIDQILVVD-ADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEESSC-TTTHHHHHHHHHHHHHHSCCCSEEEEEE-CSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEcCCC-HHHHHHHHHHHHHHHhcCCCCeEEEEEc-CcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 5678889998554 455555554331 2468777665 7777753321 1111211110 013333222
Q ss_pred hccccCccccCCccEEEEecCccc-cCCCCHHHHHHHHHHh-CCccccCCcCCCCCceeeeeeeeccCcccce----eee
Q 015555 174 AKRFLHPDVVSNYDYIFLWDEDLG-VENFDPRRYLEIVKSE-GFEISQPALDPNSTEIHHKFTIRARTKKFHR----RVY 247 (405)
Q Consensus 174 akRfLHPdiva~YDYIflwDDDL~-vd~f~i~ryf~Ivr~~-gLeISQPALd~~s~~i~h~iT~R~~~~~vHr----~~~ 247 (405)
.+.=+. .+.+|||++.|.|.. ++...+.++++.+.+. +..+.......... ...... +.....+-+ .++
T Consensus 171 ~n~G~~---~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~-~~~~~~-~~~~g~v~~~~~~~l~ 245 (387)
T 3f1y_A 171 MWRALS---VTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFR-KGESIE-EDGGGRVTELTAKPLF 245 (387)
T ss_dssp HHHHTT---TCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC--------C-CBCCSHHHHHTHHHHH
T ss_pred HHHHHH---hcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccc-cccccc-cccCCchhhhhHHHHH
Confidence 222121 357999999999999 8999999999988765 56665543321100 000000 000110000 000
Q ss_pred cccCCcccCCCCCCCCccceEEeeccccChhHHHHHhhhhccCCccccchhhhhh-hhhcCCCCCeEEEEeeeeEEec
Q 015555 248 DLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLG-YCAQGDRTKNVGIIDSEYVVHQ 324 (405)
Q Consensus 248 ~~~g~~~C~~~s~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~-~Ca~g~~~~kiGVVDa~~VvH~ 324 (405)
..--+.-+ . ..-+.+||. +|+|++++.+ . +..|||.|..+- .++.-...++|.=|+-.+..|.
T Consensus 246 ~~~~~~l~--~-~~d~~sG~~-----a~rR~~l~~i-~-----f~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~ 309 (387)
T 3f1y_A 246 NLFYPELA--G-FVQPLAGEF-----VADRELFCSI-P-----FLTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNR 309 (387)
T ss_dssp HHHCGGGT--T-CSCTTCSCE-----EEEHHHHTTS-C-----EECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCC
T ss_pred HHHhHhhc--c-ccccccccE-----EEEHHHHHhC-C-----CCCCcchHHHHHHHHHHhcCCCeEEEEecceeecC
Confidence 00000000 0 011233432 5899998865 2 247899886654 3322111235888888887776
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=55.31 E-value=25 Score=37.10 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=31.0
Q ss_pred CccEEEEecCccccCCCCHHHHHHHHHHh-CCccccCC
Q 015555 185 NYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPA 221 (405)
Q Consensus 185 ~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPA 221 (405)
.||||+|.|+|..++...+.++++.++.. ...+..|.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~ 305 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQ 305 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEE
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeE
Confidence 68999999999999999999999999876 34455554
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=49.11 E-value=8.2 Score=39.01 Aligned_cols=108 Identities=15% Similarity=0.224 Sum_probs=59.9
Q ss_pred CCccEEEEeccCcccccHHHHHhhcC----CCCcEEEEEEeCCCCCccCC-cC-CCC-ceeEEEeeccc---hhhhhccc
Q 015555 108 SNRNLLAIPAGIKQKDNVDAIVRKFL----PENFTVILFHYDGDVNAWRG-LD-WSN-KAIHIAAQNQT---KWWFAKRF 177 (405)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~----~~nFdv~LFhYDg~vd~W~d-~~-ws~-~aiHv~a~kqt---KWw~akRf 177 (405)
.++.-|++++=.. ...+...|.... ..++.|++.. ||..|+-.+ ++ +.+ ..+++...... +=.....-
T Consensus 92 ~p~vsviIp~~n~-~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g 169 (625)
T 2z86_A 92 IDGLSIVIPTYNR-AKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLG 169 (625)
T ss_dssp CCCEEEEEEESSC-HHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHH
T ss_pred CCcEEEEEecCCc-HHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHH
Confidence 4566677777433 344444444332 1378887776 666554221 11 111 12443333221 11111111
Q ss_pred cCccccCCccEEEEecCccccCCCCHHHHHHHHHHhC-CccccC
Q 015555 178 LHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEG-FEISQP 220 (405)
Q Consensus 178 LHPdiva~YDYIflwDDDL~vd~f~i~ryf~Ivr~~g-LeISQP 220 (405)
+ -.+.+|||++.|+|..++...+.++++.+.+.. .-+.+|
T Consensus 170 ~---~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~ 210 (625)
T 2z86_A 170 L---RAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGP 210 (625)
T ss_dssp H---HHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECC
T ss_pred H---HhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEe
Confidence 1 135789999999999999999999999998643 334444
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=39.42 E-value=76 Score=32.27 Aligned_cols=209 Identities=12% Similarity=0.077 Sum_probs=98.2
Q ss_pred CCccEEEEeccCccccc----HHHHHhhcCCCCc--EEEEEEeCCCCCcc-CC-cC-C--CCceeEEEee--ccchhhhh
Q 015555 108 SNRNLLAIPAGIKQKDN----VDAIVRKFLPENF--TVILFHYDGDVNAW-RG-LD-W--SNKAIHIAAQ--NQTKWWFA 174 (405)
Q Consensus 108 ~~k~Lva~~VG~kqk~~----Vd~~v~kf~~~nF--dv~LFhYDg~vd~W-~d-~~-w--s~~aiHv~a~--kqtKWw~a 174 (405)
.++.-|++++=...... +++++..- ..++ .|+|.. ||..|+- .+ ++ + ....|++... +..+=.-.
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt-~~~~~~EIIVVD-DgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~ 188 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRS-PPELVAEIVLVD-DFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTR 188 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHS-CGGGEEEEEEEE-CSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcC-CccCcEEEEEEE-CCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCHHHHH
Confidence 46677888875544122 45555432 2343 666554 6666543 11 10 0 0012444332 22211111
Q ss_pred ccccCccccCCccEEEEecCccccCCCCHHHHHHHHHHhCCccccCCcCCCC-Cceeeeee----eecc-Ccccc-eeee
Q 015555 175 KRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNS-TEIHHKFT----IRAR-TKKFH-RRVY 247 (405)
Q Consensus 175 kRfLHPdiva~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s-~~i~h~iT----~R~~-~~~vH-r~~~ 247 (405)
..=+ -.+..|||+|.|+|..++...++++++.+++..--+..|.++.-. ..+.+... .+.. ...++ +.+.
T Consensus 189 N~G~---~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (570)
T 2d7i_A 189 MLGA---SVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIP 265 (570)
T ss_dssp HHHH---HHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEEC
T ss_pred HHHH---HhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccc
Confidence 1101 135679999999999999999999999998765445555432110 00111100 0000 00000 0000
Q ss_pred cccCCcccCCCCCCCCccceEEeeccccChhHHHHHhhhhccCCcccc-chhhhhhhhhcCCCCCeEEEEeeeeEEecCC
Q 015555 248 DLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGW-GMDMKLGYCAQGDRTKNVGIIDSEYVVHQGI 326 (405)
Q Consensus 248 ~~~g~~~C~~~s~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDlvhGW-GLDf~w~~Ca~g~~~~kiGVVDa~~VvH~g~ 326 (405)
.. ....-.+ ...+..+.++-.-+=+|+|++|..+= .+. +....| |=|+-+..-+.- .+.+|.++....|.|...
T Consensus 266 ~~-~~~~~~~-~~~~~~~~~~~g~~~~irr~~~~~iG-gfD-e~~~~~g~ED~dl~~Rl~~-~G~~i~~~p~~~v~H~~r 340 (570)
T 2d7i_A 266 IP-PELQKAD-PSDPFESPVMAGGLFAVDRKWFWELG-GYD-PGLEIWGGEQYEISFKVWM-CGGRMEDIPCSRVGHIYR 340 (570)
T ss_dssp CC-TTTCCSS-TTSCEECSSCCSSSEEEEHHHHHHTT-SSC-TTCCSSSSHHHHHHHHHHH-TTCEEEEEEEEEEEECCC
T ss_pred cc-hhhhccC-CCcceecccccceEEEEEHHHHHhcC-CCC-CcccccCcchHHHHHHHHh-CCCeEEEccCeEEEEEcc
Confidence 00 0000000 00111112222223358899999774 233 345566 445444422221 356899999999999743
No 9
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=36.99 E-value=17 Score=35.45 Aligned_cols=102 Identities=13% Similarity=0.135 Sum_probs=62.6
Q ss_pred CCccEEEEeccCcccccHHHHHhhcCC-CCcEEEEEEeCCC----CC-ccCCcCCCCceeEEEeeccchhhhhccccCcc
Q 015555 108 SNRNLLAIPAGIKQKDNVDAIVRKFLP-ENFTVILFHYDGD----VN-AWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPD 181 (405)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~~-~nFdv~LFhYDg~----vd-~W~d~~ws~~aiHv~a~kqtKWw~akRfLHPd 181 (405)
..++=|++-+-. ......++|+.... ..-+=++..+.+. ++ .|..+ +..++.|....+.+=-+-.||+..+
T Consensus 27 ~~~FTvvi~ty~-R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~--~~~~vpv~v~~~~~nsLnnRF~p~~ 103 (293)
T 1omz_A 27 LDSFTLIMQTYN-RTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSL--GPHPIPVIFKPQTANKMRNRLQVFP 103 (293)
T ss_dssp TTCEEEEEEESS-CHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHT--CCCSSCEEEEECSSCCGGGGGSCCT
T ss_pred CCceEEEEEeec-ccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhcccc--CCCCccEEEEeCCCCchhhccCCCc
Confidence 344555554433 34556666765543 5566666676653 22 24432 1123344445454444678887544
Q ss_pred ccCCccEEEEecCccccCCCCHHHHHHHHHHh
Q 015555 182 VVSNYDYIFLWDEDLGVENFDPRRYLEIVKSE 213 (405)
Q Consensus 182 iva~YDYIflwDDDL~vd~f~i~ryf~Ivr~~ 213 (405)
.+ .-|.||..|||+.++..+++.=|++-+++
T Consensus 104 ~i-~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 104 EV-ETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp TC-CSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred cC-CcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 34 45999999999999999999989888754
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=32.58 E-value=62 Score=32.61 Aligned_cols=108 Identities=17% Similarity=0.093 Sum_probs=56.9
Q ss_pred CCccEEEEeccCcccccHHHHHhhcC---CCCcEEEEEEeCCCCCcc-CCcC-C--CCceeE-EEeeccchhhhhccccC
Q 015555 108 SNRNLLAIPAGIKQKDNVDAIVRKFL---PENFTVILFHYDGDVNAW-RGLD-W--SNKAIH-IAAQNQTKWWFAKRFLH 179 (405)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~---~~nFdv~LFhYDg~vd~W-~d~~-w--s~~aiH-v~a~kqtKWw~akRfLH 179 (405)
.++.-|++++= +....+...|.-.. -.+|.|++.. ||..|+= .-++ + ....++ +...++.+-.....-+
T Consensus 374 ~~~vsiii~~y-n~~~~l~~~l~s~~~q~~~~~eiivvd-d~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n~g~- 450 (625)
T 2z86_A 374 VPLVSIYIPAY-NCSKYIVRCVESALNQTITDLEVCICD-DGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAV- 450 (625)
T ss_dssp SCSEEEEEEES-SCTTTHHHHHHHHHSSSCCSEEEEEEE-ESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHHHHH-
T ss_pred CCeEEEEEeCC-CCHHHHHHHHHHHHhCcCCCeEEEEEE-CcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHHHHH-
Confidence 34566666663 33455555444331 2577877766 4554431 1110 1 011233 3333333322222212
Q ss_pred ccccCCccEEEEecCccccCCCCHHHHHHHHHHh-CCccccC
Q 015555 180 PDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQP 220 (405)
Q Consensus 180 Pdiva~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQP 220 (405)
-.+..|||++.|+|..++...++++++.+.+. +..+..+
T Consensus 451 --~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~ 490 (625)
T 2z86_A 451 --RLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYT 490 (625)
T ss_dssp --HHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEE
T ss_pred --HhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEe
Confidence 12578999999999999888888888877543 3444333
No 11
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=30.08 E-value=32 Score=30.76 Aligned_cols=29 Identities=10% Similarity=0.242 Sum_probs=26.6
Q ss_pred CCccEEEEecCccccCCCCHHHHHHHHHH
Q 015555 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKS 212 (405)
Q Consensus 184 a~YDYIflwDDDL~vd~f~i~ryf~Ivr~ 212 (405)
+..|||+|.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 56799999999999999999999999887
No 12
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=29.70 E-value=19 Score=33.72 Aligned_cols=39 Identities=23% Similarity=0.492 Sum_probs=28.7
Q ss_pred hhccccCccccCCccEEEEecCc---cccCCCCHHHHHHHHHHhCCccc
Q 015555 173 FAKRFLHPDVVSNYDYIFLWDED---LGVENFDPRRYLEIVKSEGFEIS 218 (405)
Q Consensus 173 ~akRfLHPdiva~YDYIflwDDD---L~vd~f~i~ryf~Ivr~~gLeIS 218 (405)
.+.+||- -..|||+++.|-| ++.+..++-|++ +.|.+|.
T Consensus 44 lv~~Fl~---~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV 85 (203)
T 2c0n_A 44 ALDMFLE---MKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVV 85 (203)
T ss_dssp HHHHHHH---CTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEE
T ss_pred HHHHHHh---cCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEE
Confidence 5566763 1369999999999 988888888887 4455554
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=27.98 E-value=12 Score=38.98 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=0.0
Q ss_pred cCCccEEEEecCccccCCCCHHHHHHHHHHhCCccc
Q 015555 183 VSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEIS 218 (405)
Q Consensus 183 va~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeIS 218 (405)
.+..|||++.|+|-.++...++++++.+...++-++
T Consensus 81 ~A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~~ 116 (729)
T 3l7i_A 81 EVETPYFMFLDADDELASYAITFYLEKFNNTDGLIA 116 (729)
T ss_dssp ------------------------------------
T ss_pred hccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEEE
Confidence 357899999999999998888998888874444333
Done!