Query 015557
Match_columns 404
No_of_seqs 117 out of 232
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 14:41:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015557.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015557hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1l1sa_ c.114.1.1 (A:) Hypothe 45.7 2.7 0.0002 31.9 0.7 35 369-403 36-70 (111)
2 d1k9vf_ c.23.16.1 (F:) GAT sub 32.8 8.6 0.00063 30.8 1.9 33 368-401 44-81 (200)
3 d1xm8a_ d.157.1.2 (A:) Glyoxal 28.4 14 0.001 31.8 2.6 40 363-402 126-165 (254)
4 d1qfma2 c.69.1.4 (A:431-710) P 22.2 27 0.002 27.1 3.0 27 368-394 241-267 (280)
5 d1ka9h_ c.23.16.1 (H:) GAT sub 18.4 19 0.0014 27.6 1.3 10 368-377 40-49 (195)
6 d2qeda1 d.157.1.2 (A:1-251) Gl 17.1 33 0.0024 29.1 2.6 42 363-404 122-163 (251)
7 d1oi4a1 c.23.16.2 (A:23-192) H 16.9 19 0.0014 28.5 0.9 28 368-395 66-94 (170)
8 d2axti1 f.23.37.1 (I:1-35) Pho 16.8 20 0.0015 23.6 0.9 14 21-34 10-23 (35)
9 d2fb1a2 d.113.1.6 (A:3-149) Hy 16.2 17 0.0012 28.3 0.4 54 344-397 2-69 (147)
10 d1vffa1 c.1.8.4 (A:1-423) Beta 15.0 29 0.0021 31.5 1.8 33 371-403 76-108 (423)
No 1
>d1l1sa_ c.114.1.1 (A:) Hypothetical protein MTH1491 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=45.74 E-value=2.7 Score=31.91 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=28.6
Q ss_pred EEEecCCCCCCcCcHHHHHHHHHhhcccceeeeee
Q 015557 369 YLTFPGGGTQFKNGALHYIDFIQKVSLFHLSFYVC 403 (404)
Q Consensus 369 ~l~FPGGGTqF~~GA~~YId~I~emi~l~~~~~~~ 403 (404)
.+++.|.|..+----..|...|++|...++.|++|
T Consensus 36 ~vV~~G~~v~~l~~~~~~~~~i~~L~~~gV~~~~C 70 (111)
T d1l1sa_ 36 EVVAYSMGVNVLRRDSEYSGDVSELTGQGVRFCAC 70 (111)
T ss_dssp EEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEE
T ss_pred EEEEechHHHHHHcCChhHHHHHHHHHCCCEEEec
Confidence 45777888777655567889999999999999999
No 2
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]}
Probab=32.84 E-value=8.6 Score=30.77 Aligned_cols=33 Identities=30% Similarity=0.426 Sum_probs=18.7
Q ss_pred cEEEecCCCCCCcCcHH-----HHHHHHHhhcccceeee
Q 015557 368 EYLTFPGGGTQFKNGAL-----HYIDFIQKVSLFHLSFY 401 (404)
Q Consensus 368 d~l~FPGGGTqF~~GA~-----~YId~I~emi~l~~~~~ 401 (404)
|.|++||.|. |..+.. .+++.|.+++.-+..++
T Consensus 44 D~lIlPG~G~-f~~~~~~l~~~~~~~~i~~~~~~~~PiL 81 (200)
T d1k9vf_ 44 DLLFIPGVGH-FGEGMRRLRENDLIDFVRKHVEDERYVV 81 (200)
T ss_dssp SEEEECCCSC-HHHHHHHHHHTTCHHHHHHHHHTTCEEE
T ss_pred CeEEEcChHH-HHHHHHhhhcccccccccccccccceEE
Confidence 7899999774 443321 23455666655444443
No 3
>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=28.40 E-value=14 Score=31.76 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=34.0
Q ss_pred EEEeCcEEEecCCCCCCcCcHHHHHHHHHhhcccceeeee
Q 015557 363 VKVTGEYLTFPGGGTQFKNGALHYIDFIQKVSLFHLSFYV 402 (404)
Q Consensus 363 Vk~~Gd~l~FPGGGTqF~~GA~~YId~I~emi~l~~~~~~ 402 (404)
+.++||.|+--|-|.-|-+.+.++.+.|+++..|.---.|
T Consensus 126 ~lftGDtLf~~g~Gr~~~g~~~~~~~sl~kl~~Lpd~t~v 165 (254)
T d1xm8a_ 126 AIFTGDTMFSLSCGKLFEGTPKQMLASLQKITSLPDDTSI 165 (254)
T ss_dssp EEEEETTEETTEECCCSSSCHHHHHHHHHHHHTSCTTCEE
T ss_pred eEEeCCEEEeecCCccccccHHHHHHHHHHHHhCCcccEE
Confidence 4699999999999999999999999999998887543333
No 4
>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=22.20 E-value=27 Score=27.06 Aligned_cols=27 Identities=7% Similarity=-0.059 Sum_probs=19.1
Q ss_pred cEEEecCCCCCCcCcHHHHHHHHHhhc
Q 015557 368 EYLTFPGGGTQFKNGALHYIDFIQKVS 394 (404)
Q Consensus 368 d~l~FPGGGTqF~~GA~~YId~I~emi 394 (404)
+.++|||+|=-|-....+.|+.+.+|+
T Consensus 241 ~l~~~~~~gHgf~~~~~~~~~~~~~~~ 267 (280)
T d1qfma2 241 LIHVDTKAGHGAGKPTAKVIEEVSDMF 267 (280)
T ss_dssp EEEEESSCCSSTTCCHHHHHHHHHHHH
T ss_pred EEEEeCcCCCCCCCcHHHHHHHHHHHH
Confidence 478999999778777666665555443
No 5
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]}
Probab=18.38 E-value=19 Score=27.57 Aligned_cols=10 Identities=40% Similarity=0.939 Sum_probs=8.7
Q ss_pred cEEEecCCCC
Q 015557 368 EYLTFPGGGT 377 (404)
Q Consensus 368 d~l~FPGGGT 377 (404)
+.|++||||.
T Consensus 40 d~lIlpG~g~ 49 (195)
T d1ka9h_ 40 DLLVLPGQGH 49 (195)
T ss_dssp SEEEECCCSC
T ss_pred hhhhcCCCcc
Confidence 7899999994
No 6
>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]}
Probab=17.11 E-value=33 Score=29.13 Aligned_cols=42 Identities=19% Similarity=0.342 Sum_probs=33.9
Q ss_pred EEEeCcEEEecCCCCCCcCcHHHHHHHHHhhcccceeeeeeC
Q 015557 363 VKVTGEYLTFPGGGTQFKNGALHYIDFIQKVSLFHLSFYVCC 404 (404)
Q Consensus 363 Vk~~Gd~l~FPGGGTqF~~GA~~YId~I~emi~l~~~~~~~~ 404 (404)
+.+.||.|+--|-|..|-.-+.++++.|+++..|.-...|+|
T Consensus 122 ~lftGDtLF~gg~Gr~~~g~~~~~~~sl~kl~~Lp~~t~v~p 163 (251)
T d2qeda1 122 YLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTLICC 163 (251)
T ss_dssp EEEEETTEETTEECCCSSSCHHHHHHHHHHHHTSCTTCEEEE
T ss_pred eeeecCceeeCCCCcCCCCCHHHHHHHHHHHHhCCccceecc
Confidence 478999998888888888889999999999887765444443
No 7
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]}
Probab=16.91 E-value=19 Score=28.45 Aligned_cols=28 Identities=21% Similarity=0.542 Sum_probs=16.2
Q ss_pred cEEEecCCC-CCCcCcHHHHHHHHHhhcc
Q 015557 368 EYLTFPGGG-TQFKNGALHYIDFIQKVSL 395 (404)
Q Consensus 368 d~l~FPGGG-TqF~~GA~~YId~I~emi~ 395 (404)
+-|++|||- ++..-.-.+.+++|+++..
T Consensus 66 DalivpGG~~~~~l~~~~~~~~~i~~~~~ 94 (170)
T d1oi4a1 66 DALLLPGGHSPDYLRGDNRFVTFTRDFVN 94 (170)
T ss_dssp SEEEECCBTHHHHHTTSHHHHHHHHHHHH
T ss_pred eEEEEccchhhhhhccChHHHHHHHHHhh
Confidence 679999982 2222223455566666554
No 8
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=16.82 E-value=20 Score=23.58 Aligned_cols=14 Identities=36% Similarity=0.581 Sum_probs=10.0
Q ss_pred eehhhHHHHHHHHH
Q 015557 21 VTVVVFVGLCLVGV 34 (404)
Q Consensus 21 vTvVvFVaLCLVGv 34 (404)
++|..||+|.+.|.
T Consensus 10 ~vV~fFv~lFiFGF 23 (35)
T d2axti1 10 IVVTFFVLLFVFGF 23 (35)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhh
Confidence 34566888888884
No 9
>d2fb1a2 d.113.1.6 (A:3-149) Hypothetical protein BT0354, N-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=16.21 E-value=17 Score=28.33 Aligned_cols=54 Identities=11% Similarity=0.052 Sum_probs=32.0
Q ss_pred ccCCCCCchhhh----h--cCccccEEEe-------CcEEEecCCCCCCcCcH-HHHHHHHHhhcccc
Q 015557 344 WYHNVPHAKLAE----V--KGHQNWVKVT-------GEYLTFPGGGTQFKNGA-LHYIDFIQKVSLFH 397 (404)
Q Consensus 344 Wy~NVPHtkLae----~--K~~QNWVk~~-------Gd~l~FPGGGTqF~~GA-~~YId~I~emi~l~ 397 (404)
||.+.|...|+. . -..+..|.+- .+++.||||...+-.=. ..=+.-|.+=++|.
T Consensus 2 ~~~~~p~~~v~Vd~Vi~~~~~~~~~vLLv~R~~~p~~g~W~lPGG~ie~~Es~~~aa~REl~EEtGl~ 69 (147)
T d2fb1a2 2 YYSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLE 69 (147)
T ss_dssp TTTTSCCEEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCC
T ss_pred CCCCCCCcceEEEEEEEEEeCCcCEEEEEEccCCCCCCcEeCcEeeecCCCCHHHHHHHHHHHHhCCc
Confidence 788889888876 2 3344444442 26799999988764322 22334444444443
No 10
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=15.04 E-value=29 Score=31.49 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=27.4
Q ss_pred EecCCCCCCcCcHHHHHHHHHhhcccceeeeee
Q 015557 371 TFPGGGTQFKNGALHYIDFIQKVSLFHLSFYVC 403 (404)
Q Consensus 371 ~FPGGGTqF~~GA~~YId~I~emi~l~~~~~~~ 403 (404)
|||-||.--..|+.+|-+.|.+++-.++-=+|+
T Consensus 76 I~P~~g~~n~~gl~~Y~~~i~~l~~~gI~P~VT 108 (423)
T d1vffa1 76 LFPEENKFNEDAFMKYREIIDLLLTRGITPLVT 108 (423)
T ss_dssp HCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred eecCCCccChHHHHHHHHHHHHHHhcCCeeEEe
Confidence 578788777889999999999999888766554
Done!