BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015565
(404 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224066243|ref|XP_002302043.1| predicted protein [Populus trichocarpa]
gi|222843769|gb|EEE81316.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/418 (56%), Positives = 291/418 (69%), Gaps = 55/418 (13%)
Query: 5 TVSLSSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRA 64
T +L YG SEGRCLPC G+SGRAVAVS CSSRG + SQ + G +K SS+ +S C+
Sbjct: 9 TKNLPGYGSSEGRCLPCSGISGRAVAVSPCSSRGVHYVHSQAQFGKMKCSSRASSIVCK- 67
Query: 65 SSGSYRRNPDFSRQNRNGY-RGRNRQNEERDSID--DESELLSSRNGPILSLSNSPKFQA 121
SSG +RRNPDFSRQN+ G+ R RNRQNEE + + DES+LL+S+NGP+LSLS +PKFQA
Sbjct: 68 SSGGHRRNPDFSRQNKQGFSRNRNRQNEEGNGFENLDESDLLTSKNGPLLSLSGTPKFQA 127
Query: 122 TSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVE 181
T+ PGPREKEIVELFRKVQ QLRERAA +E+KK E+ QG+ +E+ETVDSLLKLLRKHSVE
Sbjct: 128 TAAPGPREKEIVELFRKVQAQLRERAAVKEEKKVEASQGKGRENETVDSLLKLLRKHSVE 187
Query: 182 QGKRKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFR 241
QGK+K+S+ SS D SL+Q E NG++ + K TSFFDSS + R + EP ++SFTRP SNFR
Sbjct: 188 QGKKKTSNISSGDLSLDQPE-NGTYKKAKGTSFFDSSKKERNDVLEP-ITSFTRPPSNFR 245
Query: 242 RRSPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKRESESEPELETEPE-- 299
R+SPV Q K+QP+YSSE+ NS S L+ +G+ KK EI D +E E +PEL+ E E
Sbjct: 246 RKSPVPQVKFQPIYSSEDPVNSTSHLNLNGE-KKQQFEILPDTTQELELDPELDAEEEHE 304
Query: 300 ----------ASFADGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSEEGES 349
SFA G+V+DE S EGES
Sbjct: 305 LDSEPEPEPEPSFAGGDVFDELS---------------------------------EGES 331
Query: 350 SDNDE---DENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSSV 404
SD D D KQ+ IE+ DLS+LKLPELRALAKSRGVKGFSKMKK L+ELL+GSS+
Sbjct: 332 SDMDNVDGDGEKQQLIEHEDLSSLKLPELRALAKSRGVKGFSKMKKGELVELLSGSSM 389
>gi|255582495|ref|XP_002532033.1| conserved hypothetical protein [Ricinus communis]
gi|223528303|gb|EEF30349.1| conserved hypothetical protein [Ricinus communis]
Length = 385
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/406 (55%), Positives = 284/406 (69%), Gaps = 41/406 (10%)
Query: 8 LSSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSG 67
+ YG SE RCLP G+SG+AVA+ C S G+ SQ+K+G++K +S ASF CRASSG
Sbjct: 12 IPGYGSSESRCLPSSGISGKAVAIPLCPSHGNHITYSQIKVGSIKCASGAASFLCRASSG 71
Query: 68 SYRRNPDFSRQNRNGY-RGRNRQNEERDSID--DESELLSSRNGPILSLSNSPKFQATST 124
RRN DFS+Q+R G+ R RNRQNEERDS + D+S+LL+SR+GP+LSLSN+ KFQAT+
Sbjct: 72 GPRRNSDFSKQSRQGFSRNRNRQNEERDSFENLDDSDLLTSRSGPLLSLSNTSKFQATAG 131
Query: 125 PGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGK 184
PGPREKEIVELFRKVQ QLRERAA +EDKK E+ +G+ KESETVDSLLKLLRKHS+EQGK
Sbjct: 132 PGPREKEIVELFRKVQAQLRERAAVKEDKKVEASKGKVKESETVDSLLKLLRKHSIEQGK 191
Query: 185 RKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRS 244
+K SS + DF+++ E NGS D+ST FF+ +++AR+E E N +SF+RP SNFRR+S
Sbjct: 192 KKVSSVGTGDFAVDSPEHNGSLSGDRSTGFFNPNNKARSEVPEHNSTSFSRPPSNFRRKS 251
Query: 245 PVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTD----PKRESESEPELET--EP 298
PV Q KYQP+YS+E+ NS S D +G KK E D PK E++ EPELE EP
Sbjct: 252 PVPQVKYQPIYSNEDPSNSTSYFDLTGD-KKKRFEALPDTAQQPKLETQ-EPELEVALEP 309
Query: 299 EASFADGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSEEGESSDNDEDENK 358
E+SF DG DE S+ ES+ I D +E N+
Sbjct: 310 ESSFLDGNAVDELSEEESSDI------------------------------DDINEFSNQ 339
Query: 359 QEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSSV 404
Q+E E+ DLS+LKLPELRALAKSRG+KGFSKMKK L+ELL+G SV
Sbjct: 340 QKENEHEDLSSLKLPELRALAKSRGLKGFSKMKKGDLVELLSGDSV 385
>gi|297744156|emb|CBI37126.3| unnamed protein product [Vitis vinifera]
Length = 351
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/399 (56%), Positives = 274/399 (68%), Gaps = 59/399 (14%)
Query: 9 SSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGS 68
+ YGPS+GRCLPC GVS RAVA+S C+SR D++ LSQVKI +K S+GASF C ASS
Sbjct: 9 AGYGPSDGRCLPCSGVSRRAVALSPCTSRCDYKTLSQVKIVPLKCISRGASFMCNASSSG 68
Query: 69 YRRNPDFSRQNRNGY-RGRNRQNEERDSIDDESE--LLSSRNGPILSLSNSPKFQATSTP 125
RRNPDFSRQ+R+G+ RGRNR NEE ++ ++ E LSS+NGP+LSLS SPKFQAT+TP
Sbjct: 69 NRRNPDFSRQSRHGFSRGRNRHNEENNNSENLEESEFLSSKNGPLLSLSGSPKFQATATP 128
Query: 126 GPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKR 185
GPREKEIVELFRKVQ QLR+RAA +E++K+E+ Q Q KESE VDSLLKLLRKHSVEQGKR
Sbjct: 129 GPREKEIVELFRKVQAQLRDRAAMKEERKSEASQRQAKESENVDSLLKLLRKHSVEQGKR 188
Query: 186 KSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSP 245
+S SS DF+L Q + NG E+KSTSFFD SS R E+REPN +SFTRPASNF+R+SP
Sbjct: 189 RS---SSRDFNLSQPDQNGPFDEEKSTSFFDLSSSMRDEAREPN-ASFTRPASNFQRKSP 244
Query: 246 VTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKRESESEPELETEPEASFADG 305
V + KY Y +T NS+S + GK KKS PE +F DG
Sbjct: 245 VPRVKY---YPGRDTVNSVSYPNMGGKKKKSL--------------------PETTFPDG 281
Query: 306 EVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSEEGESSDNDEDENKQEEIENG 365
+V+DE SD ES +D +YD DED +QE ++
Sbjct: 282 DVFDELSDAES---SDTEVYD--------------------------DEDAEEQESAQHR 312
Query: 366 DLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSSV 404
DLSALKLPELRALAKSRG+KGFSK+KK L+ELL G S+
Sbjct: 313 DLSALKLPELRALAKSRGMKGFSKLKKGELMELLIGRSI 351
>gi|225438113|ref|XP_002277984.1| PREDICTED: SAP-like protein BP-73-like [Vitis vinifera]
Length = 377
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 235/405 (58%), Positives = 287/405 (70%), Gaps = 45/405 (11%)
Query: 9 SSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGS 68
+ YGPS+GRCLPC GVS RAVA+S C+SR D++ LSQVKI +K S+GASF C ASS
Sbjct: 9 AGYGPSDGRCLPCSGVSRRAVALSPCTSRCDYKTLSQVKIVPLKCISRGASFMCNASSSG 68
Query: 69 YRRNPDFSRQNRNGY-RGRNRQNEERDSIDDESE--LLSSRNGPILSLSNSPKFQATSTP 125
RRNPDFSRQ+R+G+ RGRNR NEE ++ ++ E LSS+NGP+LSLS SPKFQAT+TP
Sbjct: 69 NRRNPDFSRQSRHGFSRGRNRHNEENNNSENLEESEFLSSKNGPLLSLSGSPKFQATATP 128
Query: 126 GPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKR 185
GPREKEIVELFRKVQ QLR+RAA +E++K+E+ Q Q KESE VDSLLKLLRKHSVEQGKR
Sbjct: 129 GPREKEIVELFRKVQAQLRDRAAMKEERKSEASQRQAKESENVDSLLKLLRKHSVEQGKR 188
Query: 186 KSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSP 245
+S SS DF+L Q + NG E+KSTSFFD SS R E+REPN +SFTRPASNF+R+SP
Sbjct: 189 RS---SSRDFNLSQPDQNGPFDEEKSTSFFDLSSSMRDEAREPN-ASFTRPASNFQRKSP 244
Query: 246 VTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTD------PKRESESEPELETEPE 299
V + KY Y +T NS+S + GK KKS +E ++ P+ E E EPE E EPE
Sbjct: 245 VPRVKY---YPGRDTVNSVSYPNMGGKKKKSLVETYSQPEPEPEPEPEPEPEPEPELEPE 301
Query: 300 ASFADGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSEEGESSDNDEDENKQ 359
+F DG+V+DE SD ES +D +YD DED +Q
Sbjct: 302 TTFPDGDVFDELSDAES---SDTEVYD--------------------------DEDAEEQ 332
Query: 360 EEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSSV 404
E ++ DLSALKLPELRALAKSRG+KGFSK+KK L+ELL G S+
Sbjct: 333 ESAQHRDLSALKLPELRALAKSRGMKGFSKLKKGELMELLIGRSI 377
>gi|449468556|ref|XP_004151987.1| PREDICTED: SAP-like protein BP-73-like isoform 2 [Cucumis sativus]
Length = 405
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 202/424 (47%), Positives = 265/424 (62%), Gaps = 53/424 (12%)
Query: 5 TVSLSSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRA 64
+ L + P++ RC+PC GVSGRA + S S + RI VK + +S G SF C+A
Sbjct: 4 AIHLLPHNPTDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFTCKA 63
Query: 65 SSGSYRRNPDFSRQNRNGY-RGRNRQNEERDSID--DESELLSSRNGPILSLSNSPKFQA 121
SSG +RRNPDF +QNR+G+ R RNRQNEER+S+D DES+LL S+NGP+LS+S++PK QA
Sbjct: 64 SSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPKSQA 123
Query: 122 TSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVE 181
T+TPGPREKEIVELFRKVQ QLRERAA +E+KK E+ QGQ K SETVDSLLKLLRKHSVE
Sbjct: 124 TATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEA-QGQTKGSETVDSLLKLLRKHSVE 182
Query: 182 QGKR--KSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASN 239
QGKR S+ D S + NG + E + +SFF S R +++ RP SN
Sbjct: 183 QGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ--------RPVSN 234
Query: 240 FRRRSPVTQFKYQPVYSSEETENSISRLDSSG------------KGK----KSSLEIHTD 283
F+RRSPV + KYQP+Y E NS + ++S G KGK + S H +
Sbjct: 235 FQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWE 294
Query: 284 ---PKRESESEP----ELETEPEASFADGEVYDEASDVESNVITDGSLYDEVLENEPNII 336
+RE+E EP E E EPEA D E E ++E ++ + +V
Sbjct: 295 ELQSQREAEQEPEPDQEFELEPEAETYDLE--HEGDEMEPELVNLLGVSSDV-------- 344
Query: 337 DDSVYRVSEEGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLL 396
DD+ E + DN+E K E E+ DL++LKL ELRA+AKSR ++GFSKMKK+ L+
Sbjct: 345 DDTF-----EDDVKDNEEFA-KHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELV 398
Query: 397 ELLA 400
+LL+
Sbjct: 399 QLLS 402
>gi|224082822|ref|XP_002306853.1| predicted protein [Populus trichocarpa]
gi|222856302|gb|EEE93849.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 197/410 (48%), Positives = 259/410 (63%), Gaps = 63/410 (15%)
Query: 7 SLSSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASS 66
+L YG SEGRCL C G+ GRAV VS CSS SQ + G +K S + + C+ SS
Sbjct: 31 ALQGYGSSEGRCLLCSGIYGRAVLVSPCSSHCVRYNHSQAQFGKMKCSFRASYIVCK-SS 89
Query: 67 GSYRRNPDFSRQNRNGYRGRNRQNEERDSID--DESELLSSRNGPILSLSNSPKFQATST 124
G +RRNPD SRQN+ R RNRQNE+R + DES+LL+S+NG +LS S +PKFQAT+
Sbjct: 90 GGHRRNPDVSRQNKQVSRNRNRQNEKRSGFENLDESDLLTSKNGSLLSFSGTPKFQATAA 149
Query: 125 PGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGK 184
PGPRE AAA+EDKK E+ QG+ +ESETVDSLLKLLR+HS EQGK
Sbjct: 150 PGPRE-----------------AAAKEDKKFEASQGKGRESETVDSLLKLLRQHSTEQGK 192
Query: 185 RKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRS 244
+K+S+ SS +F+L+Q E NG++ + K TS F+SS + R ++ EPN +SFT+P + FRR+S
Sbjct: 193 KKTSNVSSGNFNLDQPE-NGAYKKAKGTSSFNSSKKERNDALEPN-TSFTKPPAKFRRKS 250
Query: 245 PVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKRESESEP----------EL 294
PV Q K+QP+YSSE+ NS S L+ +G+ K++ EI D E E +P +
Sbjct: 251 PVPQVKFQPIYSSEDLVNSTSHLNLNGE-KRNQFEILPDTTEELELDPEIKPEEEPELDS 309
Query: 295 ETEPEASFADGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSEEGESSDNDE 354
E EPE++F G+++DE S ES+ I + V E GE
Sbjct: 310 EQEPESAFPGGDMFDELSVGESSDIEN---------------------VDEGGE------ 342
Query: 355 DENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSSV 404
K ++IE LS+LKLPELR LAKS+GVKGFSKMKK L+ELL+GSSV
Sbjct: 343 ---KHQQIEYEVLSSLKLPELRVLAKSQGVKGFSKMKKGELVELLSGSSV 389
>gi|449468554|ref|XP_004151986.1| PREDICTED: SAP-like protein BP-73-like isoform 1 [Cucumis sativus]
Length = 410
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 203/423 (47%), Positives = 265/423 (62%), Gaps = 59/423 (13%)
Query: 9 SSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGS 68
+ +G S+ RC+PC GVSGRA + S S + RI VK + +S G SF C+ASSG
Sbjct: 13 TGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFTCKASSGG 72
Query: 69 YRRNPDFSRQNRNGY-RGRNRQNEERDSID--DESELLSSRNGPILSLSNSPKFQATSTP 125
+RRNPDF +QNR+G+ R RNRQNEER+S+D DES+LL S+NGP+LS+S++PK QAT+TP
Sbjct: 73 HRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPKSQATATP 132
Query: 126 GPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKR 185
GPREKEIVELFRKVQ QLRERAA +E+KK E+ QGQ K SETVDSLLKLLRKHSVEQGKR
Sbjct: 133 GPREKEIVELFRKVQAQLRERAAMKEEKKVEA-QGQTKGSETVDSLLKLLRKHSVEQGKR 191
Query: 186 --KSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRR 243
S+ D S + NG + E + +SFF S R +++ RP SNF+RR
Sbjct: 192 SSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ--------RPVSNFQRR 243
Query: 244 SPVTQFKYQPVYSSEETENSISRLDSSG------------KGK----KSSLEIHTD---P 284
SPV + KYQP+Y E NS + ++S G KGK + S H +
Sbjct: 244 SPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQS 303
Query: 285 KRESESEP----ELETEPEASFADGEVYD---EASDVESNVITDGSLYDEVLENEPNIID 337
+RE+E EP E E EPEA E YD E ++E ++ + +V D
Sbjct: 304 QREAEQEPEPDQEFELEPEA-----ETYDLEHEGDEMEPELVNLLGVSSDV--------D 350
Query: 338 DSVYRVSEEGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLE 397
D+ E + DN+E K E E+ DL++LKL ELRA+AKSR ++GFSKMKK+ L++
Sbjct: 351 DTF-----EDDVKDNEEFA-KHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQ 404
Query: 398 LLA 400
LL+
Sbjct: 405 LLS 407
>gi|356537005|ref|XP_003537022.1| PREDICTED: SAP-like protein BP-73-like [Glycine max]
Length = 374
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 180/395 (45%), Positives = 243/395 (61%), Gaps = 44/395 (11%)
Query: 12 GPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYRR 71
G +EG+CLPC GVSGR AV S SS G RI S+V++ +K +GASF C A +R
Sbjct: 16 GMAEGKCLPCSGVSGRTAAVYSYSSLGHHRIHSRVQVRGLKCGFRGASFVCEA-----KR 70
Query: 72 NPDFSRQNRNGY-RGRNRQNEERDSIDD-ESELLSSRNGPILSLSNSPKFQATSTPGPRE 129
NPDFSRQN++G R RNR ++ RDS + + ++ S +NGP +SLS S KFQATS PGPRE
Sbjct: 71 NPDFSRQNKHGSSRSRNRNSDGRDSFESFDDDMFSLKNGPPVSLSTSGKFQATSAPGPRE 130
Query: 130 KEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKRKSSS 189
KEIVELFRKVQ +LRERAA++E+KK E+ + Q KE+ TVDSLLKLL+KHSVEQ KR S
Sbjct: 131 KEIVELFRKVQARLRERAASKEEKKVEASRAQSKENSTVDSLLKLLKKHSVEQVKRSSGG 190
Query: 190 GSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNV--SSFTRPASNFRRRSPVT 247
G DFS +Q + + + ++ D S + E +E NV SS RP SNF+RRSPV
Sbjct: 191 GRGKDFSSDQMQESNQYDGGRNAKISDLDSTPKDEPQEDNVFSSSVARPRSNFQRRSPVP 250
Query: 248 QFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKRESESEPELETEPEASFADGEV 307
+ KYQPV + E+ + + + + +++ D + ES+SE +++++ E F
Sbjct: 251 RVKYQPVSNDEDDTDVVPVGSEDTENNQDQIDLKLDDEAESDSESDVDSKDELFF----- 305
Query: 308 YDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSEEGESSD--NDEDENKQEEIENG 365
PNI + +SE+ +S NDE +Q ++
Sbjct: 306 -------------------------PNI---GMAELSEDDDSEQTYNDESVEEQPVAQHE 337
Query: 366 DLSALKLPELRALAKSRGVKGFSKMKKAVLLELLA 400
D SALKL ELRALAK+RG+KGFSKMKK+ L+ELL
Sbjct: 338 DFSALKLSELRALAKTRGLKGFSKMKKSDLMELLT 372
>gi|449525124|ref|XP_004169569.1| PREDICTED: SAP-like protein BP-73-like, partial [Cucumis sativus]
Length = 330
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 168/329 (51%), Positives = 211/329 (64%), Gaps = 42/329 (12%)
Query: 9 SSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGS 68
+ +G S+ RC+PC GVSGRA + S S + RI VK + +S G SF C+ASSG
Sbjct: 13 TGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFTCKASSGG 72
Query: 69 YRRNPDFSRQNRNGY-RGRNRQNEERDSID--DESELLSSRNGPILSLSNSPKFQATSTP 125
+RRNPDF +QNR+G+ R RNRQNEER+S+D DES+LL S+NGP+LS+S++PK QAT+TP
Sbjct: 73 HRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPKSQATATP 132
Query: 126 GPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKR 185
GPREKEIVELFRKVQ QLRERAA +E+KK E+ QGQ K SETVDSLLKLLRKHSVEQGKR
Sbjct: 133 GPREKEIVELFRKVQAQLRERAAMKEEKKVEA-QGQTKGSETVDSLLKLLRKHSVEQGKR 191
Query: 186 --KSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRR 243
S+ D S + NG + E + +SFF S R +++ RP SNF+RR
Sbjct: 192 SSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ--------RPVSNFQRR 243
Query: 244 SPVTQFKYQPVYSSEETENSISRLDSSG------------KGK----KSSLEIHTD---P 284
SPV + KYQP+Y E NS + ++S G KGK + S H +
Sbjct: 244 SPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQS 303
Query: 285 KRESESEP----ELETEPEASFADGEVYD 309
+RE+E EP E E EPEA E YD
Sbjct: 304 QREAEQEPEPDQEFELEPEA-----ETYD 327
>gi|18390623|ref|NP_563761.1| Rho termination factor [Arabidopsis thaliana]
gi|13877951|gb|AAK44053.1|AF370238_1 unknown protein [Arabidopsis thaliana]
gi|17065622|gb|AAL33805.1| unknown protein [Arabidopsis thaliana]
gi|332189835|gb|AEE27956.1| Rho termination factor [Arabidopsis thaliana]
Length = 401
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 195/418 (46%), Positives = 251/418 (60%), Gaps = 38/418 (9%)
Query: 2 GNFTVS---LSSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGA 58
G F ++ + Y S+ RC VS R +A+ CSS D K G +K +
Sbjct: 5 GTFHLTSDYVPGYTLSDSRCFFNSAVSRRTLAILPCSSCLDH------KNGRLKSVPNRS 58
Query: 59 SFACRASSGSYRRNPDFSRQNRNGYRGRNRQNEERDSIDDE-SELLSSRNGPILSLSNSP 117
SF CRASSG YRRNPDFSR N++GYRG NRQ+ R+ D E S++LSSRNGP+ +LS+SP
Sbjct: 59 SFVCRASSGGYRRNPDFSRLNKHGYRGNNRQSGGREDFDIENSDMLSSRNGPLFNLSSSP 118
Query: 118 KFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESM--QGQRKESETVDSLLKLL 175
KFQATS+PGPREKEIVELFRKVQ QLR RAAA++++K +GQ KESETVDSLLKLL
Sbjct: 119 KFQATSSPGPREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLL 178
Query: 176 RKHSVEQGKRKSSSGSSNDFSLEQDEPNGSHI--EDKSTSFFDSSSRARTESREPNVSSF 233
RKHS EQ KR+ S SS Q E G + +D++ + S +++ N SSF
Sbjct: 179 RKHSGEQSKRQVSKFSS------QGEVQGDTVDKQDRTGNLVTSG------NKDNNASSF 226
Query: 234 TRPASNFRRRSPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKR----ESE 289
TRP S+FRR+SPV + + P YSSE T + S + KK ++E+H +P+ E E
Sbjct: 227 TRPTSSFRRKSPVPRSQSPPAYSSEATFDQSSSYSVTWTQKKDTVELHDEPEHEPAYEHE 286
Query: 290 SEPELETEPEASFA----DGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSE 345
EPE E+EP D E+ E+S D +D VL + I+D +
Sbjct: 287 HEPENESEPGPVTTMLEPDSELKPESSSFYQEEEDDDVTFD-VLSQDDGILD---VLSDD 342
Query: 346 EGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSS 403
+ D DED ++ EE DLS LKL ELR +AKSRG+KG SKMKKA L+ELL S
Sbjct: 343 DESLDDADEDSDEAEEEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGSDS 400
>gi|8844124|gb|AAF80216.1|AC025290_5 Contains a weak similarity to an unknown protein T16B12.4
gi|3746061 from Arabidopsis thaliana BAC T16B12
gb|AC005311. ESTs gb|AI999279, gb|Z30507, gb|AI997722,
gb|Z26742 come from this gene [Arabidopsis thaliana]
Length = 399
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 195/418 (46%), Positives = 251/418 (60%), Gaps = 38/418 (9%)
Query: 2 GNFTVS---LSSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGA 58
G F ++ + Y S+ RC VS R +A+ CSS D K G +K +
Sbjct: 3 GTFHLTSDYVPGYTLSDSRCFFNSAVSRRTLAILPCSSCLDH------KNGRLKSVPNRS 56
Query: 59 SFACRASSGSYRRNPDFSRQNRNGYRGRNRQNEERDSIDDE-SELLSSRNGPILSLSNSP 117
SF CRASSG YRRNPDFSR N++GYRG NRQ+ R+ D E S++LSSRNGP+ +LS+SP
Sbjct: 57 SFVCRASSGGYRRNPDFSRLNKHGYRGNNRQSGGREDFDIENSDMLSSRNGPLFNLSSSP 116
Query: 118 KFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESM--QGQRKESETVDSLLKLL 175
KFQATS+PGPREKEIVELFRKVQ QLR RAAA++++K +GQ KESETVDSLLKLL
Sbjct: 117 KFQATSSPGPREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLL 176
Query: 176 RKHSVEQGKRKSSSGSSNDFSLEQDEPNGSHI--EDKSTSFFDSSSRARTESREPNVSSF 233
RKHS EQ KR+ S SS Q E G + +D++ + S +++ N SSF
Sbjct: 177 RKHSGEQSKRQVSKFSS------QGEVQGDTVDKQDRTGNLVTSG------NKDNNASSF 224
Query: 234 TRPASNFRRRSPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKR----ESE 289
TRP S+FRR+SPV + + P YSSE T + S + KK ++E+H +P+ E E
Sbjct: 225 TRPTSSFRRKSPVPRSQSPPAYSSEATFDQSSSYSVTWTQKKDTVELHDEPEHEPAYEHE 284
Query: 290 SEPELETEPEASFA----DGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSE 345
EPE E+EP D E+ E+S D +D VL + I+D +
Sbjct: 285 HEPENESEPGPVTTMLEPDSELKPESSSFYQEEEDDDVTFD-VLSQDDGILD---VLSDD 340
Query: 346 EGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSS 403
+ D DED ++ EE DLS LKL ELR +AKSRG+KG SKMKKA L+ELL S
Sbjct: 341 DESLDDADEDSDEAEEEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGSDS 398
>gi|297848890|ref|XP_002892326.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297338168|gb|EFH68585.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 184/405 (45%), Positives = 241/405 (59%), Gaps = 33/405 (8%)
Query: 11 YGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYR 70
Y S+ R VS R +++ CSS D K G +K S +F CRASSG YR
Sbjct: 17 YTLSDSRSFSTSAVSRRTLSILPCSSCLDH------KNGRLKSVSNKNAFLCRASSGGYR 70
Query: 71 RNPDFSRQNRNGYRGRNRQNEERDSIDDE-SELLSSRNGPILSLSNSPKFQATSTPGPRE 129
RNPDFSR N++G+RG NRQ+E RD +D E S++LSSRNGP+ SLS+SPKFQA S+PGPRE
Sbjct: 71 RNPDFSRLNKHGFRGNNRQSEGRDDLDIENSDMLSSRNGPLFSLSSSPKFQAISSPGPRE 130
Query: 130 KEIVELFRKVQVQLRERAAA--REDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKRK- 186
KEIVELFRKVQ QLR RAA+ E K E+ +GQ KESETVDSLLKLLRKHS EQ K++
Sbjct: 131 KEIVELFRKVQAQLRARAASKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSKKQV 190
Query: 187 ---SSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRR 243
SS G + ++++ NG+ + + +++ N SSFTRP S+FRR+
Sbjct: 191 SKFSSQGEVQEDTVDKQNRNGNLVN--------------SGNKDNNASSFTRPTSSFRRK 236
Query: 244 SPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKRESESEPELETEPEASFA 303
SPV + K P YSSE T + S + KK ++E+ D
Sbjct: 237 SPVPRSKSPPAYSSEATFDQSSSYSVTWTQKKDTVELQ-DEPEHEPEIEHEPEYEHEPEN 295
Query: 304 DGEVYDEASDV--ESNVITD-GSLYDEVLENEPNIIDDSVYRVSEEGESSDNDEDENKQE 360
+ E + + ES + D SL+ E ++E + DD + V + + S +D DE+ E
Sbjct: 296 ESEPGPLTTMLKKESELKPDSSSLFQEEEDDEVTLDDDGILDVFSDDDESHDDADEDSDE 355
Query: 361 EIENG--DLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSS 403
E DLS LKL ELR LAKSRG+KGFSKMKKA L+ELL+ +S
Sbjct: 356 AEEEAVKDLSKLKLMELRGLAKSRGLKGFSKMKKAELVELLSSNS 400
>gi|21536878|gb|AAM61210.1| unknown [Arabidopsis thaliana]
Length = 401
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 193/418 (46%), Positives = 250/418 (59%), Gaps = 38/418 (9%)
Query: 2 GNFTVS---LSSYGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGA 58
G F ++ + Y S+ RC VS R +A+ CSS D K G +K +
Sbjct: 5 GTFHLTSDYVPGYTLSDSRCFFNSAVSRRTLAILPCSSCLDH------KNGRLKSVPNRS 58
Query: 59 SFACRASSGSYRRNPDFSRQNRNGYRGRNRQNEERDSIDDE-SELLSSRNGPILSLSNSP 117
SF CRASSG YRRNPDFSR N++GYRG NRQ+ R+ D E S++LSSRNGP+ +LS+SP
Sbjct: 59 SFVCRASSGGYRRNPDFSRLNKHGYRGNNRQSGGREDFDIENSDMLSSRNGPLFNLSSSP 118
Query: 118 KFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESM--QGQRKESETVDSLLKLL 175
KFQATS+PGP EKEIVELFRKVQ QLR RAAA++++K +GQ KESETVDSLLKLL
Sbjct: 119 KFQATSSPGPIEKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLL 178
Query: 176 RKHSVEQGKRKSSSGSSNDFSLEQDEPNGSHI--EDKSTSFFDSSSRARTESREPNVSSF 233
RKHS EQ KR+ S SS Q E G + +D++ + S +++ N SSF
Sbjct: 179 RKHSGEQSKRQVSKFSS------QGEVQGDTVDKQDRTGNLVTSG------NKDNNASSF 226
Query: 234 TRPASNFRRRSPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKRE----SE 289
TRP S+FRR+SPV + + P YSSE T + S + KK ++E+H +P+ E E
Sbjct: 227 TRPTSSFRRKSPVPRSQLPPAYSSEATFDQSSSYSVTWTQKKDTVELHDEPEHEPAYDHE 286
Query: 290 SEPELETEPEASFA----DGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSE 345
EPE E+EP D E ++S D +D VL + I+D +
Sbjct: 287 HEPENESEPGPVTTMLEPDSEXKPKSSSFYQEEEDDDVTFD-VLSQDDGILD---VLSDD 342
Query: 346 EGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSS 403
+ D DED ++ EE DLS LKL ELR++AKSRG+KG SKMKKA L+ELL S
Sbjct: 343 DESLDDADEDSDEAEEEAVKDLSELKLVELRSIAKSRGLKGLSKMKKAELVELLGSDS 400
>gi|297789698|ref|XP_002862788.1| hypothetical protein ARALYDRAFT_920271 [Arabidopsis lyrata subsp.
lyrata]
gi|297308512|gb|EFH39046.1| hypothetical protein ARALYDRAFT_920271 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 189/416 (45%), Positives = 257/416 (61%), Gaps = 46/416 (11%)
Query: 11 YGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYR 70
YG S+ R VS R +AV CSS ++ ++ G +K ++ SF CRASS +R
Sbjct: 17 YGASDSRSFSKSAVSRRTLAVLPCSSCRINKLC--IENGHLKSATNKTSFVCRASSSGHR 74
Query: 71 RN-PDFSRQNRNGYRGRNRQNEERDSIDD---ESELLSSRNGPILSLSNSPKFQATSTPG 126
RN PDFSR N++G+RGRNR+NE+RD + D E ++LSS+NGPILSLS+SPKFQATS+PG
Sbjct: 75 RNNPDFSRNNKHGFRGRNRRNEDRDGLVDGGLEDDILSSKNGPILSLSSSPKFQATSSPG 134
Query: 127 PREKEIVELFRKVQVQLRERAAAREDKKTESM--QGQ-RKESETVDSLLKLLRKHSVEQG 183
P+EKEIVELFRKVQ QLR RAAA++++K +GQ K+SETVDSLLKLLRKHS EQ
Sbjct: 135 PKEKEIVELFRKVQAQLRARAAAKKEEKKTEEASKGQGGKDSETVDSLLKLLRKHSGEQS 194
Query: 184 KRKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRR 243
K++ S+ +S + L++D+ + S +D S++ FDS ++++ N + FTRPAS+FRR
Sbjct: 195 KKQVSNFNS-EKQLQRDD-DASERQDHSSNRFDS------QNKDHNATPFTRPASSFRRN 246
Query: 244 SPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIH---------------TDPKRES 288
SPV + K Q YSSE + S + KK +E H +P+ ES
Sbjct: 247 SPVPRHKSQASYSSEAIFDQASSYSVTWTQKKDQVESHDEPEYEPEPESAAESDEPEPES 306
Query: 289 ES---EPELETEPEASFADG-EVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVS 344
+ EPE E E E+ G + D S+++ S Y E E+E D V +S
Sbjct: 307 AAEYDEPEPEAEYESESEPGLAILDSVSELKPE-----SFYQEEDEDEEEDHDAVVDELS 361
Query: 345 EEGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLA 400
++ ES D +E+ K E DLSALK ELRA+AK+RG+K SK+KKA LL LL
Sbjct: 362 DDDESLDIEEETAKDE-----DLSALKFVELRAIAKTRGLKVISKIKKADLLNLLG 412
>gi|297822851|ref|XP_002879308.1| hypothetical protein ARALYDRAFT_320865 [Arabidopsis lyrata subsp.
lyrata]
gi|297325147|gb|EFH55567.1| hypothetical protein ARALYDRAFT_320865 [Arabidopsis lyrata subsp.
lyrata]
Length = 396
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 177/406 (43%), Positives = 240/406 (59%), Gaps = 47/406 (11%)
Query: 11 YGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYR 70
YG S+ R + VS R +AV CSS ++ ++ G +K ++ SF CRASS +R
Sbjct: 17 YGASDSRSISKSTVSRRTLAVLPCSSCRINKLC--IENGHLKSATNKTSFVCRASSSGHR 74
Query: 71 RN-PDFSRQNRNGYRGRNRQNEERDSIDDESELLSSRNGPILSLSNSPKFQATSTPGPRE 129
RN PDFSR N++G+RGRNR+NE+RD + D G + SPKFQATS+PGP+E
Sbjct: 75 RNNPDFSRNNKHGFRGRNRRNEDRDGLVD---------GGLEDDIFSPKFQATSSPGPKE 125
Query: 130 KEIVELFRKVQVQLRERAAAREDKKTESM--QGQ-RKESETVDSLLKLLRKHSVEQGKRK 186
KEIVELFRKVQ QLR RAAA++++K +GQ K+SETVDSLLKLLRKHS EQ K++
Sbjct: 126 KEIVELFRKVQAQLRARAAAKKEEKKTEEASKGQGGKDSETVDSLLKLLRKHSGEQSKKQ 185
Query: 187 SSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSPV 246
S+ +S L++D+ + S +D S++ FDS ++++ N + FTRPAS+FRR SPV
Sbjct: 186 VSNFNSEK-QLQRDD-DASERQDHSSNRFDS------QNKDHNATPFTRPASSFRRNSPV 237
Query: 247 TQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKRESESEPELETEPEASFADGE 306
+ K Q YSSE + S + KK +E P+ E E EPE E+E A + + E
Sbjct: 238 PRHKSQASYSSEAIFDQGSSYSVTWTQKKDQVE----PRDEPEYEPEHESESAAGYDEPE 293
Query: 307 VYDEASDVESNVITDGSLYDEVLENEPNII------------DDSVYRVSEEGESSDNDE 354
E ES ++ D V E +P D V +S++ ES D +E
Sbjct: 294 PEGE---YESESEPGLAILDSVSELKPESFYQEEDEDEEEDHDAVVDELSDDDESLDIEE 350
Query: 355 DENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLA 400
+ K E DLSALK ELRA+AK+RG+K SK+KKA LL LL
Sbjct: 351 ETAKDE-----DLSALKFVELRAIAKTRGLKVISKIKKADLLNLLG 391
>gi|145323754|ref|NP_001077466.1| Rho termination factor [Arabidopsis thaliana]
gi|332189836|gb|AEE27957.1| Rho termination factor [Arabidopsis thaliana]
Length = 292
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 180/278 (64%), Gaps = 23/278 (8%)
Query: 11 YGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYR 70
Y S+ RC VS R +A+ CSS D K G +K +SF CRASSG YR
Sbjct: 17 YTLSDSRCFFNSAVSRRTLAILPCSSCLDH------KNGRLKSVPNRSSFVCRASSGGYR 70
Query: 71 RNPDFSRQNRNGYRGRNRQNEERDSIDDE-SELLSSRNGPILSLSNSPKFQATSTPGPRE 129
RNPDFSR N++GYRG NRQ+ R+ D E S++LSSRNGP+ +LS+SPKFQATS+PGPRE
Sbjct: 71 RNPDFSRLNKHGYRGNNRQSGGREDFDIENSDMLSSRNGPLFNLSSSPKFQATSSPGPRE 130
Query: 130 KEIVELFRKVQVQLRERAAAREDKKTESM--QGQRKESETVDSLLKLLRKHSVEQGKRKS 187
KEIVELFRKVQ QLR RAAA++++K +GQ KESETVDSLLKLLRKHS EQ KR+
Sbjct: 131 KEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSKRQV 190
Query: 188 SSGSSNDFSLEQDEPNGSHI--EDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSP 245
S SS Q E G + +D++ + S +++ N SSFTRP S+FRR+SP
Sbjct: 191 SKFSS------QGEVQGDTVDKQDRTGNLVTSG------NKDNNASSFTRPTSSFRRKSP 238
Query: 246 VTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHTD 283
V + + P YSSE T + S + KK ++E+H D
Sbjct: 239 VPRSQSPPAYSSEATFDQSSSYSVTWTQKKDTVELHDD 276
>gi|388494748|gb|AFK35440.1| unknown [Lotus japonicus]
Length = 201
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 132/177 (74%), Gaps = 7/177 (3%)
Query: 12 GPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYRR 71
G +EG+CLPC GVSGR AV SC S G RI S+VKI +K GAS C A+ RR
Sbjct: 24 GMAEGKCLPCSGVSGRTAAVYSCPSLGHHRIHSRVKIRGLKRGFVGASVVCEAT----RR 79
Query: 72 NPDFSRQNRNG--YRGRNRQNEERDSIDD-ESELLSSRNGPILSLSNSPKFQATSTPGPR 128
NPDFSR NR G R RNR N RDS ++ E ++LSS+NGP++SLS+SPKFQATS PGPR
Sbjct: 80 NPDFSRSNRQGGVSRNRNRSNGGRDSFENFEDDMLSSKNGPLVSLSSSPKFQATSAPGPR 139
Query: 129 EKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKR 185
EKEIVELFRKVQ +LRERAA++E+KK E+ + +E TVDSLLKLL+KHS EQGKR
Sbjct: 140 EKEIVELFRKVQARLRERAASKEEKKAEAFRDHGREKNTVDSLLKLLKKHSAEQGKR 196
>gi|351726447|ref|NP_001236103.1| uncharacterized protein LOC100305743 [Glycine max]
gi|255626501|gb|ACU13595.1| unknown [Glycine max]
Length = 199
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 137/187 (73%), Gaps = 8/187 (4%)
Query: 12 GPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYRR 71
G +EG+CLPC GVSGR AV S SS G RI S V++ +K +GASF C A +R
Sbjct: 17 GMAEGKCLPCSGVSGRTAAVYSYSSLGHRRIHSHVQVRGLKCGFRGASFVCEA-----KR 71
Query: 72 NPDFSRQNRNGY-RGRNRQNEERDSIDD-ESELLSSRNGPILSLSNSPKFQATSTPGPRE 129
NPDFSRQN++G R R+R ++ RDS + + ++ S +NGP +SLS S KFQATS PGPRE
Sbjct: 72 NPDFSRQNKHGSSRSRDRNSDGRDSFESFDDDMFSLKNGPPVSLSTSGKFQATSAPGPRE 131
Query: 130 KEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKRKSSS 189
KEIVELFRKVQ +LRERAA++E+KK E+ + Q KE+ TVDSLLKLL+KHSVEQ KR SS
Sbjct: 132 KEIVELFRKVQARLRERAASKEEKKVEASRAQSKENSTVDSLLKLLKKHSVEQVKR-SSG 190
Query: 190 GSSNDFS 196
G DFS
Sbjct: 191 GRGKDFS 197
>gi|413939403|gb|AFW73954.1| SAP-like protein BP-73 [Zea mays]
Length = 390
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 222/400 (55%), Gaps = 44/400 (11%)
Query: 23 GVSGRAVAVSSCSSRGDFRIL-------SQVKIGAVKYSSKGASFACRASSGSYR-RNPD 74
GVSGRA+ G+ R+ + +G ++ S C AS +R RN D
Sbjct: 13 GVSGRAIL---PLHHGECRVPPGACFMGTSPTLGPMR-----VSLVCNASPNHHRPRNSD 64
Query: 75 FSRQNRNGY-RGRNRQNEERD---SIDD-ESELLSSRNGPILSLSNSPKFQATSTPGPRE 129
SRQ + G RG+ + +++D +ID+ +S+++ S+NGP +SL+++ + QATS PG RE
Sbjct: 65 ISRQQKGGSSRGKGKSYQDKDDSENIDEFDSDIMFSKNGPPISLASNSRPQATSAPGERE 124
Query: 130 KEIVELFRKVQVQLRERAAAREDKKTES--MQGQRKESETVDSLLKLLRKHSVEQGKRKS 187
KEIVELF++VQ QLR R +REDKK E +QG+R +VDSLL+LLRKHSV+Q ++
Sbjct: 125 KEIVELFKRVQAQLRARGKSREDKKPEHAKVQGERG---SVDSLLQLLRKHSVDQRRKNG 181
Query: 188 SSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSPVT 247
N L + +G+ + ++ F + S + E ++P + F RPASNFRRRSPV
Sbjct: 182 DDKEQNSDVLRRGNDSGNR---QGSTVFGTKSDIQEEKKKPPPAPFIRPASNFRRRSPVP 238
Query: 248 QFKYQPVYSSE-ETENSISRLDSSGKGKKSSLEIHTDPKRESESEPELETEPEASFADGE 306
K+QPV +++ +T++ + S+ + D +R + EP+ + EA +
Sbjct: 239 GVKFQPVINADLDTDDDRKSIGSNAVDAVQKAKTALD-ERTATDEPDSMSPYEA-----D 292
Query: 307 VYDEASDVESNVITDGSLYDEVLE-NEPNIIDDSVYRVSEEGESSDNDED---ENKQEEI 362
E ++ N + D DE + +EP D Y G S D D EN
Sbjct: 293 SVIEPGNISLNDLDDILHDDEEFDADEP----DDEYPEPSLGISDVTDTDESHENDSTPT 348
Query: 363 ENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGS 402
+ DLS+LK+ ELR LAKSRG+KG+SK KK L+E+L+ S
Sbjct: 349 GSADLSSLKVAELRELAKSRGIKGYSKKKKNELVEVLSSS 388
>gi|115451155|ref|NP_001049178.1| Os03g0183100 [Oryza sativa Japonica Group]
gi|62510454|sp|Q8L4E7.1|BP73_ORYSJ RecName: Full=SAP-like protein BP-73; AltName: Full=OsBP-73;
AltName: Full=Riaa1
gi|21727820|emb|CAC86222.1| SAP-like protein [Oryza sativa]
gi|21727822|emb|CAC86223.1| SAP-like protein [Oryza sativa]
gi|113547649|dbj|BAF11092.1| Os03g0183100 [Oryza sativa Japonica Group]
gi|213959166|gb|ACJ54917.1| SAP-like protein [Oryza sativa Japonica Group]
gi|215694555|dbj|BAG89548.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695317|dbj|BAG90508.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 375
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 223/399 (55%), Gaps = 42/399 (10%)
Query: 13 PSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYR-R 71
P GR LP R + + S+ +L +K+ S C A+ ++R R
Sbjct: 5 PHPGRTLPAYHGDNRFLLGACFLSK--LPMLRPMKL----------SLVCSANPNNHRSR 52
Query: 72 NPDFSRQNRNG-YRGRNRQNEERD---SIDD-ESELLSSRNGPILSLSNSPKFQATSTPG 126
+ D +R + G R +++ +E+D +ID+ +++++SS+NGP +SL+++ + QATS PG
Sbjct: 53 SSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPISLTSNSRPQATSVPG 112
Query: 127 PREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKRK 186
REKEIVELF++VQ QLR R +E+KK E + Q E +VDSLL LLRKHSV+Q ++
Sbjct: 113 EREKEIVELFKRVQAQLRARGKGKEEKKPEQAKAQ-GERGSVDSLLNLLRKHSVDQRRK- 170
Query: 187 SSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSPV 246
SG + S++Q + + +++S F + + E ++P+ ++F RPASNFRRRSPV
Sbjct: 171 --SGDEKEQSVDQTKRSNESGNKQNSSIFIKND-TQEEQKKPHPAAFKRPASNFRRRSPV 227
Query: 247 TQFKYQPVYSSEETENSISRLDSSGKGKKSSLE--IHTD-PKRESESEPELETEPEASFA 303
K+QPV ++ + E I+ ++ + + K +LE TD P S EP EPE
Sbjct: 228 PNVKFQPV-TNVDAERVINNINDAVQEAKPTLENKAATDEPDSVSTFEPNSVIEPENLSL 286
Query: 304 DGEVYDEASDVESNVITDGSLYDEVL--ENEPNIIDDSVYRVSEEGESSDNDEDENKQEE 361
D D SD E D S DE +EP++ SV + D D +
Sbjct: 287 DD--LDHISDDE----PDASDTDEPSGEYDEPSLQIPSVPII-------DESHDTTLKSS 333
Query: 362 IENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLA 400
+ DLS LK+ ELR LAKSRG+KG+SKMKK L+ELL+
Sbjct: 334 LGGPDLSTLKVTELRELAKSRGIKGYSKMKKNDLVELLS 372
>gi|326513848|dbj|BAJ87942.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 208/358 (58%), Gaps = 25/358 (6%)
Query: 58 ASFACRASSGSYR-RNPDFSRQNRNGY--RGRNRQNEERDSIDD----ESELLSSRNGPI 110
S C AS ++R RNPD SRQ + G RG+++ +ERD ++ +S+ +SS+NGP
Sbjct: 47 VSLVCGASPNNHRPRNPDISRQQKRGSSSRGKSKPFQERDDSENNDEFDSDTVSSKNGPP 106
Query: 111 LSLSNSPKFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDS 170
+SL+++ + ATS PG REKEIVELF++VQ QLR R REDKK E + Q E +VDS
Sbjct: 107 ISLTSNSRPHATSAPGEREKEIVELFKRVQAQLRARGKGREDKKPEPAKSQ-GERGSVDS 165
Query: 171 LLKLLRKHSVEQGKRKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNV 230
LL LLR+HSV+Q KRKSS +F +Q + +S+ F + + A+ E ++P
Sbjct: 166 LLNLLRRHSVDQ-KRKSSDEKEQNF--DQTWRSSDSGNKQSSRIFGTKNDAQ-EGQKPPP 221
Query: 231 SSFTRPASNFRRRSPVTQFKYQPVYSSEE-TENSISRLDSSGKGKKSSL--EIHTD-PKR 286
++F RP S+FRRRSPV K+Q V + + + ++ + +G K+ L EI D P
Sbjct: 222 ATFQRPPSSFRRRSPVPGVKFQLVTNPDAGAKPVVNGMTEAGLEAKAPLEEEIAPDGPDS 281
Query: 287 ESESEPELETEPE-ASFADGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSE 345
S EP+ E AS D V D+ SD + D S D+ LE + D
Sbjct: 282 VSPYEPDSVIAAEDASLDDFVVPDDESD-----LLDTSEPDDYLE---PLDDVDDDVDDV 333
Query: 346 EGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSS 403
S+ +D+ + +E DLS+LK+ ELR LAKSRG++G+SKMKK+ L+ LL+ +S
Sbjct: 334 ADSSASHDDSQEGSPSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS 391
>gi|222624315|gb|EEE58447.1| hypothetical protein OsJ_09673 [Oryza sativa Japonica Group]
Length = 531
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 217/391 (55%), Gaps = 42/391 (10%)
Query: 13 PSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYR-R 71
P GR LP R + + S+ +L +K+ S C A+ ++R R
Sbjct: 5 PHPGRTLPAYHGDNRFLLGACFLSK--LPMLRPMKL----------SLVCSANPNNHRSR 52
Query: 72 NPDFSRQNRNG-YRGRNRQNEERD---SIDD-ESELLSSRNGPILSLSNSPKFQATSTPG 126
+ D +R + G R +++ +E+D +ID+ +++++SS+NGP +SL+++ + QATS PG
Sbjct: 53 SSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPISLTSNSRPQATSVPG 112
Query: 127 PREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKRK 186
REKEIVELF++VQ QLR R +E+KK E + Q E +VDSLL LLRKHSV+Q ++
Sbjct: 113 EREKEIVELFKRVQAQLRARGKGKEEKKPEQAKAQ-GERGSVDSLLNLLRKHSVDQRRK- 170
Query: 187 SSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSPV 246
SG + S++Q + + +++S F + + E ++P+ ++F RPASNFRRRSPV
Sbjct: 171 --SGDEKEQSVDQTKRSNESGNKQNSSIFIKND-TQEEQKKPHPAAFKRPASNFRRRSPV 227
Query: 247 TQFKYQPVYSSEETENSISRLDSSGKGKKSSLE--IHTD-PKRESESEPELETEPEASFA 303
K+QPV ++ + E I+ ++ + + K +LE TD P S EP EPE
Sbjct: 228 PNVKFQPV-TNVDAERVINNINDAVQEAKPTLENKAATDEPDSVSTFEPNSVIEPENLSL 286
Query: 304 DGEVYDEASDVESNVITDGSLYDEVL--ENEPNIIDDSVYRVSEEGESSDNDEDENKQEE 361
D D SD E D S DE +EP++ SV + D D +
Sbjct: 287 DD--LDHISDDEP----DASDTDEPSGEYDEPSLQIPSVPII-------DESHDTTLKSS 333
Query: 362 IENGDLSALKLPELRALAKSRGVKGFSKMKK 392
+ DLS LK+ ELR LAKSRG+KG+SKMKK
Sbjct: 334 LGGPDLSTLKVTELRELAKSRGIKGYSKMKK 364
>gi|218192211|gb|EEC74638.1| hypothetical protein OsI_10276 [Oryza sativa Indica Group]
Length = 532
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 217/391 (55%), Gaps = 42/391 (10%)
Query: 13 PSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYR-R 71
P GR LP R + + S+ +L +K+ S C A+ ++R R
Sbjct: 5 PHPGRTLPAYHGDNRFLLGACFLSK--LPMLRPMKL----------SLVCSANPNNHRSR 52
Query: 72 NPDFSRQNRNG-YRGRNRQNEERD---SIDD-ESELLSSRNGPILSLSNSPKFQATSTPG 126
+ D +R + G R +++ +E+D +ID+ +++++SS+NGP +SL+++ + QATS PG
Sbjct: 53 SSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPISLTSNSRPQATSVPG 112
Query: 127 PREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKRK 186
REKEIVELF++VQ QLR R +E+KK E + Q E +VDSLL LLRKHSV+Q ++
Sbjct: 113 EREKEIVELFKRVQAQLRARGKGKEEKKPEQAKAQ-GERGSVDSLLNLLRKHSVDQRRK- 170
Query: 187 SSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSPV 246
SG + S++Q + + +++S F + + E ++P+ ++F RPASNFRRRSPV
Sbjct: 171 --SGDEKEQSVDQTKRSNESGNKQNSSIFIKND-TQEEQKKPHPAAFKRPASNFRRRSPV 227
Query: 247 TQFKYQPVYSSEETENSISRLDSSGKGKKSSLE--IHTD-PKRESESEPELETEPEASFA 303
K+QPV ++ + E I+ ++ + + K +LE TD P S EP EPE
Sbjct: 228 PNVKFQPV-TNVDAERVINNINDAVQEAKPTLENKAATDEPDSVSTFEPNSVIEPENLSL 286
Query: 304 DGEVYDEASDVESNVITDGSLYDEVL--ENEPNIIDDSVYRVSEEGESSDNDEDENKQEE 361
D D SD E D S DE +EP++ SV + D D +
Sbjct: 287 DD--LDHISDDEP----DASDTDEPSGEYDEPSLQIPSVPII-------DESHDTTLKSS 333
Query: 362 IENGDLSALKLPELRALAKSRGVKGFSKMKK 392
+ DLS LK+ ELR LAKSRG+KG+SKMKK
Sbjct: 334 LGGPDLSTLKVTELRELAKSRGIKGYSKMKK 364
>gi|226532074|ref|NP_001147425.1| LOC100281034 [Zea mays]
gi|195611280|gb|ACG27470.1| SAP-like protein BP-73 [Zea mays]
Length = 390
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 221/403 (54%), Gaps = 50/403 (12%)
Query: 23 GVSGRAVAVSSCSSRGDFRIL-------SQVKIGAVKYSSKGASFACRASSGSYR-RNPD 74
GVSGRA+ G+ R+ + +G ++ S C AS +R RN D
Sbjct: 13 GVSGRAIL---PLHHGECRVPPGACFMGTSPTLGPMR-----VSLVCNASPNHHRPRNSD 64
Query: 75 FSRQNRNGY-RGRNRQNEERD---SIDD-ESELLSSRNGPILSLSNSPKFQATSTPGPRE 129
SRQ + G RG+ + +++D +ID+ +S+++ S+NGP +SL+++ + QATS PG RE
Sbjct: 65 ISRQQKGGSSRGKGKSYQDKDDSENIDEFDSDIMFSKNGPPISLASNSRPQATSAPGERE 124
Query: 130 KEIVELFRKVQVQLRERAAAREDKKTES--MQGQRKESETVDSLLKLLRKHSVEQGKRKS 187
KEIVELF++VQ QLR R +REDKK E +QG+R +VDSLL+LLRKHSV+Q ++
Sbjct: 125 KEIVELFKRVQAQLRARGKSREDKKPEHAKVQGERG---SVDSLLQLLRKHSVDQRRKNG 181
Query: 188 SSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSPVT 247
N L + +G+ + ++ F + S + E ++P + F RPASNFRRRSPV
Sbjct: 182 DDKEQNSDVLRRGNDSGNR---QGSTVFGTKSEIQEEKKKPPPAPFIRPASNFRRRSPVP 238
Query: 248 QFKYQPVYSSE-ETENSISRLDSSG----KGKKSSLEIHT---DPKRESESEPELETEPE 299
K+QPV +++ +T++ + S+ + K++L+ T +P S E + EP
Sbjct: 239 GVKFQPVINADLDTDDDRKSIGSNAVDAVQKAKTALDERTATDEPDSMSPYEADSVIEPG 298
Query: 300 ASFADGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYRVSEEGESSDNDEDENKQ 359
+ D E + Y EP++ + V++ ES EN
Sbjct: 299 NISLNDLDDILDDDEEFDADEPDDEYP-----EPSL---GISDVTDTDESH-----ENNS 345
Query: 360 EEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGS 402
+ DLS+LK+ ELR LAKSRG+KG+SK KK L+E+L+ S
Sbjct: 346 TPTGSADLSSLKVAELRELAKSRGIKGYSKKKKNELVEVLSSS 388
>gi|15217290|gb|AAK92634.1|AC079633_14 Putative plasma membrane proton ATPase [Oryza sativa Japonica
Group]
Length = 633
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 216/386 (55%), Gaps = 44/386 (11%)
Query: 24 VSGRAVAVSSCSSRGDFRILSQVKIGAVKYSS------KGASFACRASSGSYR-RNPDFS 76
VSGR + + GD R L +GA S S C A+ ++R R+ D +
Sbjct: 39 VSGRTLP----AYHGDNRFL----LGACFLSKLPMLRPMKLSLVCSANPNNHRSRSSDIT 90
Query: 77 RQNRNG-YRGRNRQNEERD---SIDD-ESELLSSRNGPILSLSNSPKFQATSTPGPREKE 131
R + G R +++ +E+D +ID+ +++++SS+NGP +SL+++ + QATS PG REKE
Sbjct: 91 RHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPISLTSNSRPQATSVPGEREKE 150
Query: 132 IVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKRKSSSGS 191
IVELF++VQ QLR R +E+KK E + Q E +VDSLL LLRKHSV+Q ++ SG
Sbjct: 151 IVELFKRVQAQLRARGKGKEEKKPEQAKAQ-GERGSVDSLLNLLRKHSVDQRRK---SGD 206
Query: 192 SNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSPVTQFKY 251
+ S++Q + + +++S F + + E ++P+ ++F RPASNFRRRSPV K+
Sbjct: 207 EKEQSVDQTKRSNESGNKQNSSIFIKND-TQEEQKKPHPAAFKRPASNFRRRSPVPNVKF 265
Query: 252 QPVYSSEETENSISRLDSSGKGKKSSLE--IHTD-PKRESESEPELETEPEASFADGEVY 308
QPV ++ + E I+ ++ + + K +LE TD P S EP EPE D
Sbjct: 266 QPV-TNVDAERVINNINDAVQEAKPTLENKAATDEPDSVSTFEPNSVIEPENLSLDD--L 322
Query: 309 DEASDVESNVITDGSLYDEVL--ENEPNIIDDSVYRVSEEGESSDNDEDENKQEEIENGD 366
D SD E D S DE +EP++ SV + D D + + D
Sbjct: 323 DHISDDEP----DASDTDEPSGEYDEPSLQIPSVPII-------DESHDTTLKSSLGGPD 371
Query: 367 LSALKLPELRALAKSRGVKGFSKMKK 392
LS LK+ ELR LAKSRG+KG+SKMKK
Sbjct: 372 LSTLKVTELRELAKSRGIKGYSKMKK 397
>gi|108706536|gb|ABF94331.1| SAP-like protein BP-73, putative, expressed [Oryza sativa Japonica
Group]
Length = 496
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 202/345 (58%), Gaps = 30/345 (8%)
Query: 59 SFACRASSGSYR-RNPDFSRQNRNG-YRGRNRQNEERD---SIDD-ESELLSSRNGPILS 112
S C A+ ++R R+ D +R + G R +++ +E+D +ID+ +++++SS+NGP +S
Sbjct: 4 SLVCSANPNNHRSRSSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPIS 63
Query: 113 LSNSPKFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLL 172
L+++ + QATS PG REKEIVELF++VQ QLR R +E+KK E + Q E +VDSLL
Sbjct: 64 LTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPEQAKAQ-GERGSVDSLL 122
Query: 173 KLLRKHSVEQGKRKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSS 232
LLRKHSV+Q ++ SG + S++Q + + +++S F + + E ++P+ ++
Sbjct: 123 NLLRKHSVDQRRK---SGDEKEQSVDQTKRSNESGNKQNSSIFIKND-TQEEQKKPHPAA 178
Query: 233 FTRPASNFRRRSPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLE--IHTD-PKRESE 289
F RPASNFRRRSPV K+QPV ++ + E I+ ++ + + K +LE TD P S
Sbjct: 179 FKRPASNFRRRSPVPNVKFQPV-TNVDAERVINNINDAVQEAKPTLENKAATDEPDSVST 237
Query: 290 SEPELETEPEASFADGEVYDEASDVESNVITDGSLYDEVL--ENEPNIIDDSVYRVSEEG 347
EP EPE D D SD E D S DE +EP++ SV +
Sbjct: 238 FEPNSVIEPENLSLDD--LDHISDDEP----DASDTDEPSGEYDEPSLQIPSVPII---- 287
Query: 348 ESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKK 392
D D + + DLS LK+ ELR LAKSRG+KG+SKMKK
Sbjct: 288 ---DESHDTTLKSSLGGPDLSTLKVTELRELAKSRGIKGYSKMKK 329
>gi|357137537|ref|XP_003570357.1| PREDICTED: SAP-like protein BP-73-like [Brachypodium distachyon]
Length = 386
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 220/406 (54%), Gaps = 45/406 (11%)
Query: 11 YGPSEGRCLPCMGVSGRAVAVSSCSSRGDFRILSQVKIGAVKYSSKGASFACRASSGSYR 70
+G S LP GR + S S+ +L ++ + +V C AS + R
Sbjct: 13 HGASIRAALPLYHADGRFLPGSCYLSKSP--VLRRMSVSSV----------CGASPNNNR 60
Query: 71 -RNPDFSRQNRNGY-RGRNRQNEERDSIDDESEL---LSSRNGPILSLSNSPKFQATSTP 125
RN D SRQ + G RG+++ +ERD ++ E + S+NGP +SL+++ + QATSTP
Sbjct: 61 PRNLDISRQQKRGSSRGKSKPFQERDDSENNDEFDSDMFSKNGPPVSLASNSRPQATSTP 120
Query: 126 GPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKR 185
G REKEIVELF++VQ QLR R REDKK E + Q E +VDSLL LLRKHSV+Q ++
Sbjct: 121 GEREKEIVELFKRVQAQLRARGKGREDKKPEPAKSQ-GERGSVDSLLNLLRKHSVDQRRK 179
Query: 186 KSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSP 245
+ N L+Q + +S+ F + S + E ++P +SF RP S+FRRRSP
Sbjct: 180 GTDEKEQN---LDQTWRSNDSGSKQSSRIFGTKSDTQ-EGQKPPPASFQRPPSSFRRRSP 235
Query: 246 VTQFKYQPVYSSE---ETENSISRLDSSGKGKKSSLEIHT---DPKRESESEPELETEPE 299
V K+Q V +++ + ++S++ + + K LE T +P S EP+ PE
Sbjct: 236 VPGVKFQLVTNADADSDAKSSVNGMADAVLKAKMPLEEETASDEPDSVSLYEPDAVISPE 295
Query: 300 ASFADGEVYDEASDVESNVITDGSLYDEVLE--NEPNIIDDSVYRVSEEGESSDNDEDEN 357
+ + D + + + D +E +E +P++ D G +S +D E
Sbjct: 296 NT----SLDDFVVSDDDSYVLDNDEPNEYVEPLEDPDVTD---------GSTSHDDSLEC 342
Query: 358 KQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSS 403
E+ DLS LK+ ELR LAKSRG+KG+SKMKK+ L+ +L+ ++
Sbjct: 343 SSAEVP--DLSLLKVTELRELAKSRGIKGYSKMKKSELVAVLSNTA 386
>gi|413924140|gb|AFW64072.1| hypothetical protein ZEAMMB73_387125 [Zea mays]
Length = 348
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 197/361 (54%), Gaps = 43/361 (11%)
Query: 58 ASFACRASSGSYR-RNPDFSRQNRNGY-RGRNRQNEERD---SIDD-ESELLSSRNGPIL 111
S C AS +R R D S+ + G RG+ R +++D +ID+ +S+++ SRNGP +
Sbjct: 12 VSLVCSASPNHHRPRISDISQLQKEGSSRGKGRSYQDKDDSENIDEYDSDIMFSRNGPPI 71
Query: 112 SLSNSPKFQATSTPGPREKEIVELFRKVQVQLRERAAAREDK-KTESMQGQRKESETVDS 170
SL+++ + Q TS PG RE EIVELF++VQ LR R RE K + + G+R +VDS
Sbjct: 72 SLASTSRPQDTSAPGEREMEIVELFKRVQALLRARVKGREKKPEPAKVHGERG---SVDS 128
Query: 171 LLKLLRKHSVEQGKRKSSSGSSNDFS-LEQDEPNGSHIEDKSTSFFDSSSRARTESREPN 229
L+KLLRKHSV+Q +RKSS +F + + +G+ + ++ F + S + E ++
Sbjct: 129 LIKLLRKHSVDQ-RRKSSDEKEQNFGVMRRSNDSGNR---RGSTIFGTKSDIQEEQKKQP 184
Query: 230 VSSFTRPASNFRRRSPVTQFKYQPVYSSE-----ETENSISRLDSSGKGKKSSLEIHT-- 282
+ F RPASNFRRRSPV K+QPV + + + ++ + + + + K++L+ T
Sbjct: 185 PAPFKRPASNFRRRSPVPGVKFQPVINVDVDTDADRKSMRNNVADAVQMAKTALDERTAT 244
Query: 283 -DPKRESESEPELETEPEASFADGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVY 341
+P S EP+ E E D D ES+ + Y E+ ++ D
Sbjct: 245 DEPDYMSPYEPDSVIEAENISLDDLDDISDDDEESDAGEPDNEYPELSLEIADVTD---- 300
Query: 342 RVSEEGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAG 401
+ E ESS DLS+LK+ ELR LAKSRG+KG+SK KK L+E+L+
Sbjct: 301 -IDELHESS---------------DLSSLKVAELRELAKSRGIKGYSKTKKNELIEVLSS 344
Query: 402 S 402
S
Sbjct: 345 S 345
>gi|102139988|gb|ABF70123.1| DNA-binding protein-related [Musa balbisiana]
Length = 258
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 168/305 (55%), Gaps = 59/305 (19%)
Query: 105 SRNGPILSLSNSPKFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKE 164
S+NG +LS S + ++QAT+T G RE+EIVELFRKVQ QLRERAA +E+KK E+ Q + +
Sbjct: 5 SKNGSLLSPSTNTRYQATATSGQREREIVELFRKVQAQLRERAAIKEEKKIEAAQQGQSK 64
Query: 165 SETVDSLLKLLRKHSVEQGKRKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTE 224
TVDS+LKLLR+HS G +K ++ +FS++Q E + + ++++ + F S E
Sbjct: 65 KGTVDSVLKLLRRHS---GDQKKTTSPGEEFSVDQVERSNTFEDEQNINPFGPSDSKSQE 121
Query: 225 S--REPNVSSFTRPASNFRRRSPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLEIHT 282
S R P S+ RPASNF R+SPV + ++Q V S+EE NS S G+ KK+
Sbjct: 122 SDVRGPLPSA--RPASNFGRKSPVPRMEFQAVLSAEEDINSAPS-KSRGRRKKT------ 172
Query: 283 DPKRESESEPELETEPEASFADGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSVYR 342
D E +A+ ES V+ DG DE
Sbjct: 173 --------------------GDYECV-QAAPAES-VVLDGP--DE--------------- 193
Query: 343 VSEEGESSDNDEDENKQEEIENG------DLSALKLPELRALAKSRGVKGFSKMKKAVLL 396
+S + + + DE +E IE+ DL +LKL ELR LA+ RGVKG+SK+KK L
Sbjct: 194 LSSDDQLDHSGSDETAEETIESSSTEASPDLGSLKLSELRDLARYRGVKGYSKLKKGELA 253
Query: 397 ELLAG 401
ELL+
Sbjct: 254 ELLSA 258
>gi|149391249|gb|ABR25642.1| sap-like protein bp-73 [Oryza sativa Indica Group]
Length = 259
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 155/278 (55%), Gaps = 24/278 (8%)
Query: 108 GPILSLSNSPKFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESET 167
GP +SL+++ + QATS PG REKEIVELF++VQ QLR R +E+KK E + Q E +
Sbjct: 1 GPPISLTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPEQAKAQ-GERGS 59
Query: 168 VDSLLKLLRKHSVEQGKRKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESRE 227
VDSLL LLRKHSV+Q ++ SG + S++Q + + +++S F + + E ++
Sbjct: 60 VDSLLNLLRKHSVDQRRK---SGDEKEQSVDQTKRSNESGNKQNSSIFIKND-TQEEQKK 115
Query: 228 PNVSSFTRPASNFRRRSPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLE--IHTD-P 284
P+ ++F RPASNFRRRSPV K+QPV ++ + E I+ ++ + + K +LE TD P
Sbjct: 116 PHPAAFKRPASNFRRRSPVPNVKFQPV-TNVDAERVINNINDAVQEAKPTLENKAATDEP 174
Query: 285 KRESESEPELETEPEASFADGEVYDEASDVESNVITDGSLYDEVL--ENEPNIIDDSVYR 342
S EP EPE D D SD E D S DE +EP++ SV
Sbjct: 175 DSVSTFEPNSVIEPENLSLDD--LDHISDDEP----DASDTDEPSGEYDEPSLPIPSVPI 228
Query: 343 VSEEGESSDNDEDENKQEEIENGDLSALKLPELRALAK 380
+ D D + + DLS LK+ ELR LAK
Sbjct: 229 I-------DESHDTTLKSSLGGPDLSTLKVTELRELAK 259
>gi|30684844|ref|NP_850160.1| ATP binding / ATPase [Arabidopsis thaliana]
gi|330253406|gb|AEC08500.1| ATP binding / ATPase [Arabidopsis thaliana]
Length = 309
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 134/216 (62%), Gaps = 35/216 (16%)
Query: 70 RRNPDFSRQNRNGYRGRNRQNEERDSIDD---ESELLSSRNGPILSLSNSPKFQATSTPG 126
R NPDFSR N++G+RGRNR+NE++D + D E ++LSS+N
Sbjct: 28 RNNPDFSRNNKHGFRGRNRRNEDKDGLVDGGLEDDMLSSKN------------------- 68
Query: 127 PREKEIVELFRKVQVQLRERAAAREDKKTESM--QGQR-KESETVDSLLKLLRKHSVEQG 183
EKEIVELF+KVQVQLR RAAA++++K +GQ KESETVDSLLKLLRKHS EQ
Sbjct: 69 --EKEIVELFKKVQVQLRARAAAKKEEKKTEEASKGQGGKESETVDSLLKLLRKHSGEQS 126
Query: 184 KRKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRR 243
K++ S+ +S L++D+ + S ++ S+S FDS +++ N + FTRPAS+F+R
Sbjct: 127 KKQVSNFNSEK-QLQRDD-DASERQNHSSSRFDS------RNKDHNATPFTRPASSFKRN 178
Query: 244 SPVTQFKYQPVYSSEETENSISRLDSSGKGKKSSLE 279
SPV + K Q YSSE + S + KK +E
Sbjct: 179 SPVPRHKSQASYSSEAIFDEASSYSVTWTQKKDQVE 214
>gi|449505157|ref|XP_004162393.1| PREDICTED: legumin J-like [Cucumis sativus]
Length = 353
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 20/120 (16%)
Query: 285 KRESESEPE----LETEPEASFADGEVYDEASDVESNVITDGSLYDEVLENEPNIIDDSV 340
+RE+E EPE E EPEA D E E ++E ++ L + +DD+
Sbjct: 247 QREAEQEPEPDQEFELEPEAETYDLE--HEGDEMEPELVN--------LLGVSSDVDDTF 296
Query: 341 YRVSEEGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLA 400
E + DN+E K E E+ DL++LKL ELRA+AKSR ++GFSKMKK+ L++LL+
Sbjct: 297 -----EDDVKDNEEF-AKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLS 350
>gi|168018171|ref|XP_001761620.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687304|gb|EDQ73688.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 525
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 4/56 (7%)
Query: 353 DEDENKQEEIENG----DLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSSV 404
D + + E +ENG +LS+ KLPELR++AK++G+KG+SK+KK L+EL+A S V
Sbjct: 466 DNEVAQSEAVENGAVSKNLSSYKLPELRSMAKAKGLKGYSKLKKGELVELIAASEV 521
>gi|399523940|ref|ZP_10764536.1| Rho termination factor, N-terminal domain protein, partial
[Atopobium sp. ICM58]
gi|398375025|gb|EJN52508.1| Rho termination factor, N-terminal domain protein, partial
[Atopobium sp. ICM58]
Length = 65
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 361 EIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELL 399
E+ LSA+KLPEL+ALA SRG+KGFS+++K L+ELL
Sbjct: 8 EMTTASLSAMKLPELKALAASRGLKGFSQLRKPQLIELL 46
>gi|19347613|gb|AAL86018.1| Riaa1 [Oryza sativa]
Length = 83
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 366 DLSALKLPELRALAKSRGVKGFSKMKKAVLLELLA 400
DLS LK+ ELR LAKSRG+KG+SKMKK L+ELL+
Sbjct: 46 DLSTLKVTELRELAKSRGIKGYSKMKKNDLVELLS 80
>gi|168018169|ref|XP_001761619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687303|gb|EDQ73687.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 531
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Query: 348 ESSDNDEDENKQEEIENG----DLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSS 403
+++ D + + E +E+G DLS+ KL ELR++AK++G+KG+SK+KK L++L+A S
Sbjct: 467 KTASADTEVAESEALEHGAVSKDLSSYKLSELRSMAKAKGLKGYSKLKKGELVKLIAASD 526
Query: 404 V 404
V
Sbjct: 527 V 527
>gi|315604647|ref|ZP_07879710.1| transcription termination factor Rho [Actinomyces sp. oral taxon
180 str. F0310]
gi|315313659|gb|EFU61713.1| transcription termination factor Rho [Actinomyces sp. oral taxon
180 str. F0310]
Length = 564
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 361 EIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELL 399
E+ LSA+KLPEL+ALA SRG+KG S+++K+ L+ELL
Sbjct: 8 EMTTASLSAMKLPELKALAASRGLKGISQLRKSQLIELL 46
>gi|168045425|ref|XP_001775178.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673517|gb|EDQ60039.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 226
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 31/35 (88%)
Query: 366 DLSALKLPELRALAKSRGVKGFSKMKKAVLLELLA 400
DLS KLPELR+ AK+RG+KG+SK+KK+ L++L+A
Sbjct: 187 DLSNFKLPELRSKAKARGLKGYSKLKKSELIDLIA 221
>gi|399527210|ref|ZP_10766935.1| transcription termination factor Rho [Actinomyces sp. ICM39]
gi|398362286|gb|EJN45990.1| transcription termination factor Rho [Actinomyces sp. ICM39]
Length = 619
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 324 LYDEVLENEP--NIIDDSVYRVSEE------GESSDNDEDENKQEEIENGDLSALKLPEL 375
++D L + P I ++RV E+ SS + N+ LSA+KLPEL
Sbjct: 1 MFDFGLRDAPLLRIFLIKLFRVLEQSPRPLWAHSSKDHFVSNETSAETTTSLSAMKLPEL 60
Query: 376 RALAKSRGVKGFSKMKKAVLLELL---AGSS 403
+ALA SRG+KG S+++K+ L+ELL AG+S
Sbjct: 61 KALAASRGLKGISQLRKSQLIELLSNGAGAS 91
>gi|396584359|ref|ZP_10484831.1| transcription termination factor Rho [Actinomyces sp. ICM47]
gi|395548009|gb|EJG15365.1| transcription termination factor Rho [Actinomyces sp. ICM47]
Length = 566
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 361 EIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELL 399
E+ LSA+KLPEL+ALA SRG+KG S+++K L+ELL
Sbjct: 8 EMTTVSLSAMKLPELKALAASRGLKGISQLRKPQLIELL 46
>gi|293189715|ref|ZP_06608431.1| transcription termination factor Rho [Actinomyces odontolyticus
F0309]
gi|292821305|gb|EFF80248.1| transcription termination factor Rho [Actinomyces odontolyticus
F0309]
Length = 616
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%), Gaps = 3/40 (7%)
Query: 367 LSALKLPELRALAKSRGVKGFSKMKKAVLLELL---AGSS 403
LSA+KLPEL+ALA SRG+KG S+++K+ L+ELL AG+S
Sbjct: 52 LSAMKLPELKALAASRGLKGISQLRKSQLIELLSNGAGAS 91
>gi|154509279|ref|ZP_02044921.1| hypothetical protein ACTODO_01804 [Actinomyces odontolyticus ATCC
17982]
gi|153798913|gb|EDN81333.1| transcription termination factor Rho [Actinomyces odontolyticus
ATCC 17982]
Length = 616
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%), Gaps = 3/40 (7%)
Query: 367 LSALKLPELRALAKSRGVKGFSKMKKAVLLELL---AGSS 403
LSA+KLPEL+ALA SRG+KG S+++K+ L+ELL AG+S
Sbjct: 52 LSAMKLPELKALAASRGLKGISQLRKSQLIELLSNGAGAS 91
>gi|422011841|ref|ZP_16358612.1| Rho termination factor, N-terminal domain protein, partial
[Actinomyces georgiae F0490]
gi|394763684|gb|EJF45757.1| Rho termination factor, N-terminal domain protein, partial
[Actinomyces georgiae F0490]
Length = 105
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 367 LSALKLPELRALAKSRGVKGFSKMKKAVLLELL 399
L A+KLPEL+ALA+SRG+KG S+++K L+ELL
Sbjct: 14 LKAMKLPELKALAQSRGLKGISQLRKPQLVELL 46
>gi|357138807|ref|XP_003570978.1| PREDICTED: LOW QUALITY PROTEIN: SAP-like protein BP-73-like
[Brachypodium distachyon]
Length = 233
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 54/117 (46%), Gaps = 32/117 (27%)
Query: 132 IVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKRKSSSGS 191
I LF +VQ QL R REDKK E + Q E +V SLL LLRK S +Q K
Sbjct: 37 IQVLFSRVQTQLPARGKGREDKKPEPAKSQ-GERGSVGSLLNLLRKPSFDQXK------- 88
Query: 192 SNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRRSPVTQ 248
S ++ E N FD + R+ + F RP S+F +RSPV +
Sbjct: 89 ----SSDEKEQN-----------FDQTCRS---------NPFQRPPSSFWQRSPVXK 121
>gi|320096076|ref|ZP_08027677.1| transcription termination factor Rho, partial [Actinomyces sp. oral
taxon 178 str. F0338]
gi|319977016|gb|EFW08758.1| transcription termination factor Rho [Actinomyces sp. oral taxon
178 str. F0338]
Length = 110
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 367 LSALKLPELRALAKSRGVKGFSKMKKAVLLELL 399
L A+KLPEL+ALA+SRG+KG S+++K L+ELL
Sbjct: 14 LKAMKLPELKALAQSRGLKGISQLRKPQLVELL 46
>gi|160915884|ref|ZP_02078092.1| hypothetical protein EUBDOL_01907 [Eubacterium dolichum DSM 3991]
gi|158432360|gb|EDP10649.1| ribosomal protein L20 [Eubacterium dolichum DSM 3991]
Length = 171
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 364 NGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLA 400
N DL+++K+ ELR LAK++GV+G+S MKKA LL LA
Sbjct: 135 NADLASMKVAELRELAKAKGVEGYSTMKKAELLAALA 171
>gi|66396231|ref|YP_240537.1| ORF041 [Staphylococcus phage 29]
gi|66396308|ref|YP_240612.1| ORF045 [Staphylococcus phage 52A]
gi|417889255|ref|ZP_12533350.1| Rho termination factor, N-terminal domain protein [Staphylococcus
aureus subsp. aureus 21195]
gi|62636648|gb|AAX91759.1| ORF041 [Staphylococcus phage 29]
gi|62636724|gb|AAX91835.1| ORF045 [Staphylococcus phage 52A]
gi|116235552|gb|ABJ88887.1| conserved hypothetical protein [Staphylococcus phage 80]
gi|341852041|gb|EGS92936.1| Rho termination factor, N-terminal domain protein [Staphylococcus
aureus subsp. aureus 21195]
Length = 108
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 7/57 (12%)
Query: 345 EEGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAG 401
E+ E S+ + DE K LS +K+ EL+ LAK RG+KG+S MKK L+++L G
Sbjct: 57 EQTEQSETNADEQKS-------LSDMKVTELKELAKKRGIKGYSDMKKDELIKVLVG 106
>gi|386772592|ref|ZP_10094970.1| transcription termination factor Rho [Brachybacterium
paraconglomeratum LC44]
Length = 714
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 366 DLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGSSV 404
DL+A KLPEL+A+A RG+KG +++K L+E L G +V
Sbjct: 9 DLAAKKLPELQAMAAERGIKGARRLRKGELIEALRGGAV 47
>gi|414090222|ref|YP_006990339.1| hypothetical protein phiNJ2_0020 [Streptococcus phage phiNJ2]
gi|408732238|gb|AFU88680.1| hypothetical protein phiNJ2_0020 [Streptococcus phage phiNJ2]
Length = 61
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 363 ENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGS 402
+N D+S +K+ ELR +AK RG++G+SK+ K L++LL G+
Sbjct: 15 DNDDISKMKISELREIAKQRGLEGYSKLDKDALIKLLGGT 54
>gi|225443758|ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera]
gi|297740528|emb|CBI30710.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 370 LKLPELRALAKSRGVKGFSKMKKAVLLELL 399
+K+ EL+ LAKSRG+KG+SKMKK+ L+ELL
Sbjct: 231 MKVTELKELAKSRGIKGYSKMKKSELVELL 260
>gi|302762861|ref|XP_002964852.1| hypothetical protein SELMODRAFT_439080 [Selaginella moellendorffii]
gi|300167085|gb|EFJ33690.1| hypothetical protein SELMODRAFT_439080 [Selaginella moellendorffii]
Length = 414
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 184 KRKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFTRPASNFRRR 243
KR+SS SSND +++ ++ GS + D SR+ +E + + S RP + F R+
Sbjct: 214 KRRSSKASSNDTAVKSEK--GSPVSD---------SRSASEEHKSRLQS--RPHATFVRK 260
Query: 244 SPVTQFK----------------YQPVYSSEETENSISRLDSSGKGKKSSLEIHTDPKRE 287
SP+T + S++ + ++ R + + + +E TD +
Sbjct: 261 SPITHARSGRRKRRAAKKIDQESKAANVSAKSSNETVLRTEDTSVVTEVIVETPTDAIKI 320
Query: 288 SESEPELETEPEASFADGE---VYDEASDVE---SNVITDGSLYDEVLENEPNIIDDSVY 341
+ E A+GE V EA VE S ++ DG N+P +D ++
Sbjct: 321 ILGQKESVLVEAVGVANGEPAGVLLEAEKVEKVSSELLKDG--------NDPATLDGNLK 372
Query: 342 RVSEEGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFS 388
+ E SD+D + + DLS L + LR++AKSRG++G+S
Sbjct: 373 AADTDIELSDDDTAAS-----DETDLSILTIQRLRSIAKSRGLRGYS 414
>gi|224076946|ref|XP_002305062.1| predicted protein [Populus trichocarpa]
gi|222848026|gb|EEE85573.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 370 LKLPELRALAKSRGVKGFSKMKKAVLLELL 399
+KL EL+ LAKSRG+KG+SK+KK LLE L
Sbjct: 195 MKLTELKELAKSRGIKGYSKLKKGELLEFL 224
>gi|418447355|ref|ZP_13018809.1| hypothetical protein MQO_02388 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387732319|gb|EIK19553.1| hypothetical protein MQO_02388 [Staphylococcus aureus subsp. aureus
VRS8]
Length = 108
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 354 EDENKQEEIENGD----LSALKLPELRALAKSRGVKGFSKMKKAVLLELLAG 401
EDE +E N D LS +K+ EL+ LAK RG+KG+S MKK L++ L G
Sbjct: 55 EDEQTEEPEANADEQKSLSDMKVAELKELAKKRGIKGYSDMKKDELIKTLEG 106
>gi|148228559|ref|NP_001082528.1| otogelin precursor [Xenopus laevis]
gi|49903364|gb|AAH76719.1| LOC398539 protein [Xenopus laevis]
Length = 2414
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 100/271 (36%), Gaps = 19/271 (7%)
Query: 55 SKGASFACRASSGSYRRNPDFSRQNRNGYRGRNRQNEERDSIDDESELLSSRNGPILSLS 114
SKG A RA+SG +++NP N + + Q+ D+ D E S G ++
Sbjct: 91 SKGNVRAKRAASGGHKKNPSAYETNN---KFKPNQSNRNDNDDSSKEHKDSNKGKGQKIN 147
Query: 115 NSPKFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKL 174
N ++ +EK E K++ R+ + K + K + LK
Sbjct: 148 NVLSKDSSEENASKEKWSHEKNDKMKTNERKGKDHNDSSKESKEKNHEKRQNNKNGWLKD 207
Query: 175 LRKHSVEQGKRKSSSGSSNDFSLEQDEPNGSHIEDKSTSFFDSSSRARTESREPNVSSFT 234
+ + K K +N Q++ N K + +++ R N S+
Sbjct: 208 SSEENDSASKEKKDHDKNNKVRTNQNKGNDHDHSSKESKENSHEKGEKSKKRWQNGSAEE 267
Query: 235 RPASNFRRRSPVTQFKYQPVY---------SSEETENSIS-RLDSSGKGKKSSLEIHTDP 284
+ S+ ++ K +P + S E ENS R + + +K S E D
Sbjct: 268 KDDSSKEKKDHEKNDKVKPKHNKGNGHDDSSKESKENSHEKREKNKNRWQKGSAEEKDDG 327
Query: 285 KRESESEPELETEPEA------SFADGEVYD 309
+E + + E + A S ADGE D
Sbjct: 328 SKEKKDKTLEEMDTNACIFNKESIADGETKD 358
>gi|302757563|ref|XP_002962205.1| hypothetical protein SELMODRAFT_403819 [Selaginella moellendorffii]
gi|300170864|gb|EFJ37465.1| hypothetical protein SELMODRAFT_403819 [Selaginella moellendorffii]
Length = 359
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 360 EEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGS 402
EEI DL+ L +P LR +AKSRG+ G+S++KK L+ LL S
Sbjct: 317 EEIN--DLAKLTVPTLRGMAKSRGLSGYSRLKKDDLVHLLTSS 357
>gi|229037844|ref|ZP_04189642.1| hypothetical protein bcere0028_57550 [Bacillus cereus AH1271]
gi|228727466|gb|EEL78644.1| hypothetical protein bcere0028_57550 [Bacillus cereus AH1271]
Length = 86
Score = 41.6 bits (96), Expect = 0.70, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 358 KQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELLAG 401
K +E+E DL+ L +PEL+ LAK +G+KG+S + + L+ELL G
Sbjct: 43 KHDEVEQ-DLTDLTVPELKELAKEQGLKGYSSLNREELIELLNG 85
>gi|30684516|ref|NP_193609.2| Rho termination factor [Arabidopsis thaliana]
gi|332658683|gb|AEE84083.1| Rho termination factor [Arabidopsis thaliana]
Length = 245
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 29/36 (80%)
Query: 367 LSALKLPELRALAKSRGVKGFSKMKKAVLLELLAGS 402
+ +KL EL+ +AK+RG+KG+SK++K+ LLEL+ S
Sbjct: 210 IETMKLAELKEVAKNRGIKGYSKLRKSELLELIRSS 245
>gi|242051983|ref|XP_002455137.1| hypothetical protein SORBIDRAFT_03g004930 [Sorghum bicolor]
gi|241927112|gb|EES00257.1| hypothetical protein SORBIDRAFT_03g004930 [Sorghum bicolor]
Length = 119
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 340 VYRVSEEGESSDNDEDENKQEEIENGDLSALKLPELRALAKSRGVKGFSKMKKAVLLELL 399
V+R + + D+D E +Q ++ N L + + +LR LA++R ++G+SK+KK L++ L
Sbjct: 57 VHRREQSHDRGDSDVSEERQRKVMN--LEDMNVADLRELARARRMRGYSKLKKGELIDRL 114
Query: 400 AG 401
G
Sbjct: 115 KG 116
>gi|334186676|ref|NP_001190763.1| Rho termination factor [Arabidopsis thaliana]
gi|332658685|gb|AEE84085.1| Rho termination factor [Arabidopsis thaliana]
Length = 189
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 374 ELRALAKSRGVKGFSKMKKAVLLELLAGS 402
EL+ +AK+RG+KG+SK++K+ LLEL+ S
Sbjct: 161 ELKEVAKNRGIKGYSKLRKSELLELIRSS 189
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.305 0.124 0.330
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,022,599,661
Number of Sequences: 23463169
Number of extensions: 255469192
Number of successful extensions: 1058179
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 8070
Number of HSP's that attempted gapping in prelim test: 1003288
Number of HSP's gapped (non-prelim): 40505
length of query: 404
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 259
effective length of database: 8,957,035,862
effective search space: 2319872288258
effective search space used: 2319872288258
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 78 (34.7 bits)