Query 015573
Match_columns 404
No_of_seqs 266 out of 1309
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 07:34:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015573.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015573hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 4.7E-48 1E-52 374.2 13.6 181 201-381 79-261 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 9.1E-41 2E-45 302.2 16.4 161 211-371 1-162 (162)
3 PF03031 NIF: NLI interacting 100.0 1.6E-38 3.4E-43 283.0 14.4 158 212-373 1-159 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 1.1E-36 2.4E-41 284.4 15.2 156 210-381 20-193 (195)
5 KOG2832 TFIIF-interacting CTD 100.0 1.8E-33 3.8E-38 279.6 8.3 160 206-381 184-345 (393)
6 TIGR02250 FCP1_euk FCP1-like p 100.0 4.4E-31 9.5E-36 238.5 12.3 137 209-348 4-154 (156)
7 COG5190 FCP1 TFIIF-interacting 99.9 2.3E-28 4.9E-33 247.9 8.6 172 207-379 208-381 (390)
8 smart00577 CPDc catalytic doma 99.9 3.1E-27 6.8E-32 210.0 13.5 145 210-354 1-148 (148)
9 KOG0323 TFIIF-interacting CTD 99.7 1.1E-16 2.4E-21 170.8 10.0 135 211-348 146-297 (635)
10 TIGR01685 MDP-1 magnesium-depe 98.7 2.5E-08 5.5E-13 92.1 8.0 138 212-349 3-158 (174)
11 PLN03243 haloacid dehalogenase 98.7 3.1E-09 6.8E-14 103.4 1.8 99 250-349 108-210 (260)
12 PLN02575 haloacid dehalogenase 98.7 4.4E-09 9.4E-14 107.9 0.9 98 250-348 215-316 (381)
13 TIGR01681 HAD-SF-IIIC HAD-supe 98.7 1.2E-08 2.5E-13 89.0 2.8 110 212-333 1-120 (128)
14 PRK13288 pyrophosphatase PpaX; 98.6 3.3E-08 7.2E-13 91.7 4.9 95 250-345 81-179 (214)
15 COG0637 Predicted phosphatase/ 98.6 8.8E-09 1.9E-13 97.6 0.3 99 250-349 85-187 (221)
16 PRK14988 GMP/IMP nucleotidase; 98.6 2E-08 4.4E-13 95.0 2.4 93 250-343 92-188 (224)
17 TIGR01454 AHBA_synth_RP 3-amin 98.6 1.4E-08 3E-13 93.6 0.6 96 250-346 74-173 (205)
18 TIGR02253 CTE7 HAD superfamily 98.6 3.5E-08 7.6E-13 91.4 3.1 95 250-345 93-192 (221)
19 TIGR01449 PGP_bact 2-phosphogl 98.5 2.6E-08 5.6E-13 91.6 1.9 97 250-347 84-184 (213)
20 PRK11587 putative phosphatase; 98.5 1.1E-07 2.4E-12 88.9 5.4 96 250-347 82-181 (218)
21 PRK13226 phosphoglycolate phos 98.5 7.8E-08 1.7E-12 90.9 4.3 96 249-345 93-192 (229)
22 TIGR01509 HAD-SF-IA-v3 haloaci 98.5 5.7E-08 1.2E-12 86.6 2.7 91 250-342 84-178 (183)
23 PRK10725 fructose-1-P/6-phosph 98.5 7.2E-08 1.5E-12 87.1 2.6 93 251-345 88-183 (188)
24 TIGR01993 Pyr-5-nucltdase pyri 98.5 5.6E-08 1.2E-12 88.1 1.8 91 250-343 83-180 (184)
25 TIGR01662 HAD-SF-IIIA HAD-supe 98.5 3.5E-07 7.5E-12 78.8 6.4 112 212-343 1-126 (132)
26 TIGR01422 phosphonatase phosph 98.4 2E-07 4.3E-12 88.9 4.5 97 250-347 98-200 (253)
27 cd01427 HAD_like Haloacid deha 98.4 4E-07 8.6E-12 75.3 5.1 107 213-335 1-127 (139)
28 TIGR00213 GmhB_yaeD D,D-heptos 98.4 5.8E-07 1.3E-11 81.8 6.0 115 212-344 2-146 (176)
29 PRK13225 phosphoglycolate phos 98.4 1.5E-07 3.2E-12 92.3 1.8 95 250-345 141-236 (273)
30 TIGR03351 PhnX-like phosphonat 98.3 5.1E-07 1.1E-11 83.8 4.9 95 250-344 86-186 (220)
31 PRK13222 phosphoglycolate phos 98.3 3.8E-07 8.3E-12 84.4 3.6 94 250-344 92-189 (226)
32 PRK13478 phosphonoacetaldehyde 98.3 3.2E-07 6.9E-12 88.6 3.1 98 250-347 100-202 (267)
33 PRK13223 phosphoglycolate phos 98.3 5.3E-07 1.1E-11 88.0 4.5 94 250-344 100-197 (272)
34 PRK09456 ?-D-glucose-1-phospha 98.3 1.6E-07 3.4E-12 86.6 0.7 102 249-350 82-187 (199)
35 COG4996 Predicted phosphatase 98.3 2.3E-06 4.9E-11 76.3 7.6 132 213-350 2-148 (164)
36 PF12689 Acid_PPase: Acid Phos 98.3 2.2E-06 4.7E-11 79.1 7.7 117 211-334 3-137 (169)
37 TIGR01656 Histidinol-ppas hist 98.3 5.4E-07 1.2E-11 79.8 3.5 117 212-344 1-141 (147)
38 TIGR01684 viral_ppase viral ph 98.3 2.2E-06 4.7E-11 85.4 7.6 124 209-355 124-283 (301)
39 PLN02940 riboflavin kinase 98.2 3.8E-07 8.3E-12 93.4 1.7 97 250-347 92-193 (382)
40 PHA03398 viral phosphatase sup 98.2 5.4E-06 1.2E-10 82.7 9.5 125 209-356 126-286 (303)
41 PRK08942 D,D-heptose 1,7-bisph 98.2 2.4E-06 5.2E-11 77.9 6.2 117 211-344 3-143 (181)
42 PRK10563 6-phosphogluconate ph 98.2 2.6E-07 5.6E-12 86.0 -0.3 95 250-347 87-185 (221)
43 TIGR01261 hisB_Nterm histidino 98.2 2.5E-06 5.5E-11 77.5 5.9 122 212-348 2-147 (161)
44 TIGR00338 serB phosphoserine p 98.2 5.5E-07 1.2E-11 83.6 1.2 94 250-344 84-191 (219)
45 TIGR01549 HAD-SF-IA-v1 haloaci 98.2 1.3E-06 2.7E-11 76.6 3.3 80 250-333 63-146 (154)
46 PHA02597 30.2 hypothetical pro 98.1 8.2E-07 1.8E-11 81.4 1.7 96 250-347 73-173 (197)
47 TIGR01686 FkbH FkbH-like domai 98.1 4.8E-06 1E-10 83.1 5.5 109 211-334 3-116 (320)
48 TIGR01664 DNA-3'-Pase DNA 3'-p 98.0 1.7E-05 3.6E-10 72.4 7.4 107 211-331 13-137 (166)
49 COG5190 FCP1 TFIIF-interacting 98.0 4.5E-06 9.8E-11 85.9 4.1 135 210-346 25-172 (390)
50 PHA02530 pseT polynucleotide k 98.0 4.9E-06 1.1E-10 81.2 4.0 126 211-347 158-295 (300)
51 TIGR01672 AphA HAD superfamily 98.0 1E-05 2.2E-10 78.4 5.7 131 210-345 62-208 (237)
52 PRK06698 bifunctional 5'-methy 97.9 4.9E-06 1.1E-10 86.9 2.9 92 250-344 329-423 (459)
53 PF13419 HAD_2: Haloacid dehal 97.8 1.3E-05 2.9E-10 69.6 3.7 94 249-343 75-172 (176)
54 COG0546 Gph Predicted phosphat 97.8 1.6E-05 3.4E-10 75.0 4.3 95 250-345 88-186 (220)
55 PRK06769 hypothetical protein; 97.8 1.7E-05 3.7E-10 72.4 4.2 116 211-347 4-136 (173)
56 PLN02770 haloacid dehalogenase 97.8 2.2E-05 4.8E-10 75.3 4.5 97 250-347 107-207 (248)
57 PRK13582 thrH phosphoserine ph 97.7 1.1E-05 2.4E-10 73.9 1.2 94 250-344 67-167 (205)
58 TIGR01489 DKMTPPase-SF 2,3-dik 97.7 7.5E-05 1.6E-09 66.9 5.9 86 250-336 71-177 (188)
59 PRK05446 imidazole glycerol-ph 97.7 0.00012 2.5E-09 75.0 7.9 120 211-345 2-145 (354)
60 TIGR01428 HAD_type_II 2-haloal 97.6 6.7E-05 1.5E-09 68.6 4.3 94 250-344 91-188 (198)
61 TIGR02254 YjjG/YfnB HAD superf 97.6 5.9E-05 1.3E-09 69.6 3.9 95 250-345 96-195 (224)
62 PLN02954 phosphoserine phospha 97.6 6.1E-05 1.3E-09 70.1 3.6 93 250-344 83-192 (224)
63 TIGR01668 YqeG_hyp_ppase HAD s 97.5 8.5E-05 1.8E-09 67.7 3.7 109 210-347 24-135 (170)
64 PRK10826 2-deoxyglucose-6-phos 97.5 0.00011 2.4E-09 68.7 4.3 100 250-350 91-194 (222)
65 TIGR02009 PGMB-YQAB-SF beta-ph 97.5 6.3E-05 1.4E-09 67.5 2.3 92 250-344 87-182 (185)
66 PRK09449 dUMP phosphatase; Pro 97.4 0.00011 2.4E-09 68.3 3.9 94 250-344 94-192 (224)
67 PRK11009 aphA acid phosphatase 97.4 0.00035 7.5E-09 67.8 7.0 129 210-344 62-207 (237)
68 PF05152 DUF705: Protein of un 97.4 0.0011 2.3E-08 66.0 10.2 124 210-355 121-279 (297)
69 TIGR01670 YrbI-phosphatas 3-de 97.4 0.00013 2.9E-09 65.4 3.3 112 212-344 2-115 (154)
70 TIGR02137 HSK-PSP phosphoserin 97.4 9.8E-05 2.1E-09 69.5 2.4 50 250-300 67-116 (203)
71 TIGR01663 PNK-3'Pase polynucle 97.3 0.00049 1.1E-08 73.8 7.8 108 211-332 168-295 (526)
72 KOG3109 Haloacid dehalogenase- 97.2 0.0002 4.3E-09 68.9 2.8 85 250-336 99-193 (244)
73 TIGR01689 EcbF-BcbF capsule bi 97.2 0.00085 1.8E-08 59.3 6.1 73 212-301 2-87 (126)
74 TIGR01990 bPGM beta-phosphoglu 97.1 0.00032 7E-09 62.8 2.7 91 251-344 87-181 (185)
75 TIGR02247 HAD-1A3-hyp Epoxide 97.1 0.00019 4.2E-09 66.3 1.3 98 250-348 93-196 (211)
76 TIGR01548 HAD-SF-IA-hyp1 haloa 97.1 0.00099 2.1E-08 61.2 5.8 79 253-333 108-190 (197)
77 TIGR02252 DREG-2 REG-2-like, H 97.0 0.00058 1.3E-08 62.6 4.0 90 251-342 105-199 (203)
78 COG1011 Predicted hydrolase (H 97.0 0.00081 1.8E-08 62.2 4.9 84 250-334 98-184 (229)
79 PLN02779 haloacid dehalogenase 97.0 0.00061 1.3E-08 67.2 4.2 126 250-382 143-275 (286)
80 PRK11133 serB phosphoserine ph 97.0 0.00087 1.9E-08 67.6 5.2 95 250-345 180-288 (322)
81 KOG2914 Predicted haloacid-hal 97.0 0.00018 3.9E-09 69.3 -0.0 100 249-349 90-197 (222)
82 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.0 0.0013 2.8E-08 62.8 5.8 95 211-331 8-105 (242)
83 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.9 0.0014 3.1E-08 59.4 5.2 94 250-344 79-186 (201)
84 PRK08238 hypothetical protein; 96.9 0.0011 2.3E-08 70.5 4.8 78 251-334 72-152 (479)
85 PLN02811 hydrolase 96.8 0.00067 1.5E-08 63.6 2.6 97 250-347 77-183 (220)
86 PLN02919 haloacid dehalogenase 96.8 0.0016 3.5E-08 75.1 5.5 97 252-348 162-262 (1057)
87 COG0560 SerB Phosphoserine pho 96.7 0.0015 3.2E-08 62.1 3.8 84 250-335 76-174 (212)
88 TIGR01691 enolase-ppase 2,3-di 96.6 0.0015 3.2E-08 62.6 3.3 92 250-344 94-192 (220)
89 PRK09484 3-deoxy-D-manno-octul 96.6 0.0025 5.4E-08 58.7 4.6 113 211-345 21-136 (183)
90 TIGR01533 lipo_e_P4 5'-nucleot 96.6 0.0021 4.7E-08 63.4 4.3 92 210-302 74-173 (266)
91 TIGR01493 HAD-SF-IA-v2 Haloaci 96.5 0.00066 1.4E-08 60.7 -0.2 76 250-332 89-167 (175)
92 PRK09552 mtnX 2-hydroxy-3-keto 96.2 0.012 2.5E-07 55.3 6.4 95 250-345 73-184 (219)
93 COG0561 Cof Predicted hydrolas 96.0 0.016 3.5E-07 55.6 6.7 58 211-291 3-61 (264)
94 COG0241 HisB Histidinol phosph 95.9 0.013 2.9E-07 54.8 5.6 112 211-336 5-137 (181)
95 COG2179 Predicted hydrolase of 95.9 0.013 2.9E-07 54.3 5.3 96 208-332 25-121 (175)
96 PRK00192 mannosyl-3-phosphogly 95.9 0.017 3.8E-07 56.0 6.5 58 211-291 4-62 (273)
97 PF08282 Hydrolase_3: haloacid 95.8 0.015 3.3E-07 53.4 5.4 54 214-290 1-55 (254)
98 PF13344 Hydrolase_6: Haloacid 95.7 0.02 4.4E-07 48.1 5.4 48 214-285 1-49 (101)
99 TIGR01487 SPP-like sucrose-pho 95.7 0.025 5.4E-07 52.6 6.5 57 212-291 2-59 (215)
100 PRK03669 mannosyl-3-phosphogly 95.7 0.025 5.5E-07 54.8 6.7 58 210-290 6-64 (271)
101 TIGR02726 phenyl_P_delta pheny 95.5 0.017 3.7E-07 53.2 4.5 117 211-347 7-124 (169)
102 PRK01158 phosphoglycolate phos 95.5 0.04 8.6E-07 51.4 7.0 58 211-291 3-61 (230)
103 PRK10748 flavin mononucleotide 95.5 0.0084 1.8E-07 57.1 2.4 89 250-344 112-204 (238)
104 PRK10530 pyridoxal phosphate ( 95.5 0.042 9.1E-07 52.4 7.2 58 211-291 3-61 (272)
105 PF08645 PNK3P: Polynucleotide 95.4 0.022 4.7E-07 51.8 4.5 106 212-332 1-129 (159)
106 PRK10513 sugar phosphate phosp 95.4 0.034 7.4E-07 53.3 6.1 57 211-290 3-60 (270)
107 TIGR00099 Cof-subfamily Cof su 95.2 0.043 9.3E-07 52.3 6.4 54 214-290 2-56 (256)
108 PRK15126 thiamin pyrimidine py 95.2 0.045 9.7E-07 52.8 6.5 57 212-291 3-60 (272)
109 TIGR02461 osmo_MPG_phos mannos 95.1 0.053 1.2E-06 51.7 6.6 53 214-290 2-55 (225)
110 PRK10976 putative hydrolase; P 95.1 0.048 1E-06 52.2 6.3 57 212-291 3-60 (266)
111 TIGR02463 MPGP_rel mannosyl-3- 95.1 0.048 1E-06 50.8 6.0 54 214-290 2-56 (221)
112 TIGR03333 salvage_mtnX 2-hydro 95.0 0.055 1.2E-06 50.6 6.4 94 249-342 68-177 (214)
113 TIGR01544 HAD-SF-IE haloacid d 95.0 0.043 9.4E-07 54.6 5.9 104 250-354 120-248 (277)
114 PTZ00445 p36-lilke protein; Pr 95.0 0.02 4.4E-07 55.1 3.3 131 209-348 41-205 (219)
115 smart00775 LNS2 LNS2 domain. T 94.9 0.055 1.2E-06 49.0 5.7 62 214-287 2-67 (157)
116 TIGR01482 SPP-subfamily Sucros 94.8 0.068 1.5E-06 49.5 6.2 53 214-289 1-54 (225)
117 TIGR01488 HAD-SF-IB Haloacid D 94.4 0.11 2.3E-06 46.2 6.2 82 250-332 72-169 (177)
118 PRK10444 UMP phosphatase; Prov 94.2 0.082 1.8E-06 51.4 5.5 52 212-287 2-54 (248)
119 COG3882 FkbH Predicted enzyme 94.1 0.064 1.4E-06 57.1 4.8 126 209-347 220-354 (574)
120 TIGR01486 HAD-SF-IIB-MPGP mann 94.1 0.12 2.6E-06 49.6 6.3 54 214-290 2-56 (256)
121 TIGR01484 HAD-SF-IIB HAD-super 93.9 0.11 2.4E-06 47.6 5.5 53 214-288 2-55 (204)
122 PF06888 Put_Phosphatase: Puta 93.7 0.14 2.9E-06 49.9 6.0 54 250-304 70-126 (234)
123 PTZ00174 phosphomannomutase; P 93.7 0.12 2.6E-06 49.6 5.6 52 211-285 5-57 (247)
124 TIGR01456 CECR5 HAD-superfamil 93.7 0.11 2.4E-06 52.1 5.6 53 212-288 1-62 (321)
125 PLN02645 phosphoglycolate phos 93.4 0.13 2.8E-06 51.4 5.4 52 211-286 28-80 (311)
126 PRK12702 mannosyl-3-phosphogly 93.3 0.25 5.4E-06 49.9 7.1 57 212-291 2-59 (302)
127 PRK14502 bifunctional mannosyl 93.1 0.29 6.4E-06 54.3 8.0 59 209-290 414-473 (694)
128 TIGR01490 HAD-SF-IB-hyp1 HAD-s 92.9 0.14 3E-06 46.7 4.5 84 251-335 87-185 (202)
129 TIGR01458 HAD-SF-IIA-hyp3 HAD- 92.7 0.19 4.2E-06 48.7 5.3 47 212-278 2-49 (257)
130 TIGR01452 PGP_euk phosphoglyco 92.6 0.2 4.4E-06 48.9 5.5 41 212-276 3-44 (279)
131 PLN02887 hydrolase family prot 92.6 0.44 9.6E-06 52.1 8.5 57 211-290 308-365 (580)
132 PRK10187 trehalose-6-phosphate 92.2 0.32 6.9E-06 47.6 6.3 60 211-288 14-75 (266)
133 TIGR01457 HAD-SF-IIA-hyp2 HAD- 91.9 0.29 6.2E-06 47.3 5.5 54 212-289 2-59 (249)
134 PF11019 DUF2608: Protein of u 91.8 0.22 4.9E-06 48.7 4.7 100 250-349 80-210 (252)
135 PF09419 PGP_phosphatase: Mito 91.8 0.21 4.6E-06 46.3 4.2 93 209-331 39-146 (168)
136 PLN02423 phosphomannomutase 91.0 0.39 8.5E-06 46.3 5.4 53 211-289 7-59 (245)
137 TIGR01485 SPP_plant-cyano sucr 90.1 0.5 1.1E-05 45.2 5.2 60 211-290 1-61 (249)
138 COG0647 NagD Predicted sugar p 90.1 0.45 9.8E-06 47.2 5.0 51 211-285 8-59 (269)
139 KOG3120 Predicted haloacid deh 89.7 0.13 2.8E-06 50.0 0.7 58 250-308 83-142 (256)
140 TIGR01460 HAD-SF-IIA Haloacid 89.5 0.5 1.1E-05 45.2 4.6 51 214-288 1-56 (236)
141 TIGR01675 plant-AP plant acid 89.3 0.4 8.6E-06 46.6 3.8 89 210-301 76-172 (229)
142 COG4502 5'(3')-deoxyribonucleo 88.8 0.67 1.5E-05 42.4 4.6 28 250-277 67-94 (180)
143 TIGR01548 HAD-SF-IA-hyp1 haloa 86.4 0.31 6.8E-06 44.6 1.1 14 213-226 2-15 (197)
144 PF00702 Hydrolase: haloacid d 86.4 0.71 1.5E-05 41.8 3.4 80 249-332 125-206 (215)
145 TIGR01511 ATPase-IB1_Cu copper 86.2 0.87 1.9E-05 49.3 4.5 85 250-344 404-489 (562)
146 COG4359 Uncharacterized conser 84.7 2.5 5.4E-05 40.4 6.1 41 250-290 72-113 (220)
147 KOG3085 Predicted hydrolase (H 84.6 0.55 1.2E-05 45.9 1.8 79 252-333 115-197 (237)
148 COG2503 Predicted secreted aci 84.4 0.55 1.2E-05 46.3 1.8 69 210-279 78-151 (274)
149 TIGR02009 PGMB-YQAB-SF beta-ph 83.9 0.53 1.2E-05 42.0 1.3 16 212-227 2-17 (185)
150 TIGR02244 HAD-IG-Ncltidse HAD 83.8 1.3 2.9E-05 45.4 4.3 52 248-299 181-240 (343)
151 PLN03017 trehalose-phosphatase 83.8 1.5 3.3E-05 45.4 4.8 58 210-285 110-167 (366)
152 PLN02770 haloacid dehalogenase 83.3 0.61 1.3E-05 44.7 1.6 16 211-226 22-37 (248)
153 TIGR02252 DREG-2 REG-2-like, H 82.9 0.64 1.4E-05 42.5 1.5 15 212-226 1-15 (203)
154 PF03767 Acid_phosphat_B: HAD 82.3 0.21 4.5E-06 48.1 -2.1 75 210-288 71-156 (229)
155 PRK11590 hypothetical protein; 82.0 0.78 1.7E-05 42.9 1.7 39 250-288 94-134 (211)
156 COG1877 OtsB Trehalose-6-phosp 81.4 2 4.4E-05 42.6 4.5 59 209-285 16-76 (266)
157 PLN02151 trehalose-phosphatase 81.4 2.3 5E-05 43.9 5.0 58 210-285 97-154 (354)
158 PRK10748 flavin mononucleotide 81.1 0.76 1.6E-05 43.7 1.3 16 211-226 10-25 (238)
159 PLN02779 haloacid dehalogenase 80.8 0.9 2E-05 44.8 1.8 17 210-226 39-55 (286)
160 TIGR01990 bPGM beta-phosphoglu 79.6 0.78 1.7E-05 40.9 0.8 15 213-227 1-15 (185)
161 TIGR00685 T6PP trehalose-phosp 79.5 1.3 2.8E-05 42.5 2.3 48 210-275 2-51 (244)
162 TIGR02254 YjjG/YfnB HAD superf 79.0 1 2.2E-05 41.4 1.4 16 212-227 2-17 (224)
163 TIGR01525 ATPase-IB_hvy heavy 78.7 2.6 5.7E-05 45.4 4.6 86 250-344 383-470 (556)
164 TIGR01428 HAD_type_II 2-haloal 78.4 1.1 2.3E-05 40.9 1.4 15 212-226 2-16 (198)
165 PRK14501 putative bifunctional 78.3 3.3 7.2E-05 46.2 5.4 62 208-287 489-552 (726)
166 TIGR01491 HAD-SF-IB-PSPlk HAD- 78.0 1.3 2.7E-05 40.0 1.7 16 211-226 4-19 (201)
167 TIGR02247 HAD-1A3-hyp Epoxide 77.6 1.3 2.7E-05 40.8 1.6 15 212-226 3-17 (211)
168 TIGR01493 HAD-SF-IA-v2 Haloaci 77.5 1.1 2.4E-05 39.8 1.2 13 214-226 2-14 (175)
169 PRK09449 dUMP phosphatase; Pro 76.6 1.3 2.7E-05 41.2 1.3 15 211-225 3-17 (224)
170 PLN02580 trehalose-phosphatase 76.6 4.2 9.2E-05 42.5 5.2 59 210-286 118-176 (384)
171 TIGR02471 sucr_syn_bact_C sucr 76.5 2.7 5.8E-05 39.7 3.5 52 214-289 2-53 (236)
172 PRK10826 2-deoxyglucose-6-phos 76.3 1.4 3E-05 41.1 1.5 16 211-226 7-22 (222)
173 TIGR01680 Veg_Stor_Prot vegeta 75.8 3.6 7.8E-05 41.2 4.3 91 211-302 101-198 (275)
174 PF06941 NT5C: 5' nucleotidase 75.7 1.5 3.2E-05 40.4 1.5 82 250-347 72-161 (191)
175 PF05116 S6PP: Sucrose-6F-phos 74.6 4.2 9.1E-05 39.3 4.4 55 210-288 1-57 (247)
176 PRK11590 hypothetical protein; 73.7 4.8 0.0001 37.6 4.4 17 210-226 5-21 (211)
177 TIGR01512 ATPase-IB2_Cd heavy 72.5 2.9 6.2E-05 45.0 2.9 86 250-344 361-448 (536)
178 PF13419 HAD_2: Haloacid dehal 71.2 1.9 4.2E-05 37.0 1.1 14 214-227 1-14 (176)
179 PF08235 LNS2: LNS2 (Lipin/Ned 70.1 12 0.00026 34.5 6.0 60 214-285 2-62 (157)
180 PLN02382 probable sucrose-phos 68.7 9.9 0.00021 39.8 5.8 17 209-225 7-23 (413)
181 PF12710 HAD: haloacid dehalog 66.2 6.1 0.00013 35.2 3.2 46 253-298 87-138 (192)
182 TIGR01545 YfhB_g-proteo haloac 66.0 8.4 0.00018 36.4 4.3 37 251-287 94-132 (210)
183 COG3769 Predicted hydrolase (H 61.6 25 0.00055 34.7 6.6 57 211-291 7-64 (274)
184 PRK09552 mtnX 2-hydroxy-3-keto 61.0 4.7 0.0001 37.7 1.6 16 211-226 3-18 (219)
185 PLN02205 alpha,alpha-trehalose 60.7 11 0.00024 43.2 4.8 59 209-287 594-654 (854)
186 PF08484 Methyltransf_14: C-me 58.8 19 0.00042 32.9 5.1 41 252-294 53-94 (160)
187 TIGR01545 YfhB_g-proteo haloac 54.6 7 0.00015 36.9 1.6 16 211-226 5-20 (210)
188 COG1011 Predicted hydrolase (H 54.4 7.1 0.00015 35.9 1.5 16 211-226 4-19 (229)
189 PF12710 HAD: haloacid dehalog 49.8 9.3 0.0002 34.0 1.5 13 214-226 1-13 (192)
190 PLN03063 alpha,alpha-trehalose 49.4 31 0.00068 39.3 5.9 64 209-287 505-570 (797)
191 PF05822 UMPH-1: Pyrimidine 5' 48.8 19 0.00042 35.5 3.6 113 249-365 88-224 (246)
192 TIGR01488 HAD-SF-IB Haloacid D 47.7 8.7 0.00019 33.9 1.0 13 214-226 2-14 (177)
193 PF02358 Trehalose_PPase: Treh 45.6 19 0.00041 34.1 3.0 51 215-283 1-53 (235)
194 TIGR01490 HAD-SF-IB-hyp1 HAD-s 45.2 10 0.00023 34.3 1.1 13 214-226 2-14 (202)
195 KOG2134 Polynucleotide kinase 44.1 34 0.00073 36.1 4.6 55 211-276 75-130 (422)
196 PLN02919 haloacid dehalogenase 43.6 14 0.0003 43.4 2.1 16 211-226 75-90 (1057)
197 PRK10671 copA copper exporting 41.4 25 0.00055 40.0 3.6 85 251-344 650-735 (834)
198 PLN03064 alpha,alpha-trehalose 40.8 47 0.001 38.7 5.6 70 209-287 589-660 (934)
199 PF00702 Hydrolase: haloacid d 40.7 17 0.00037 32.6 1.8 15 212-226 2-16 (215)
200 PF05761 5_nucleotid: 5' nucle 40.5 41 0.00089 35.9 4.8 52 248-299 180-240 (448)
201 COG4229 Predicted enolase-phos 40.3 19 0.00041 34.5 2.0 90 251-342 103-198 (229)
202 KOG4549 Magnesium-dependent ph 37.9 1.5E+02 0.0032 27.0 7.0 117 211-332 5-133 (144)
203 cd06537 CIDE_N_B CIDE_N domain 31.8 70 0.0015 26.5 3.8 16 211-226 39-54 (81)
204 cd06539 CIDE_N_A CIDE_N domain 30.8 92 0.002 25.7 4.3 16 211-226 40-55 (78)
205 TIGR02826 RNR_activ_nrdG3 anae 29.2 1.1E+02 0.0024 27.5 5.1 63 252-329 73-137 (147)
206 KOG3040 Predicted sugar phosph 28.8 94 0.002 30.6 4.7 103 211-338 7-126 (262)
207 cd06538 CIDE_N_FSP27 CIDE_N do 28.0 87 0.0019 25.8 3.7 15 211-225 39-53 (79)
208 smart00266 CAD Domains present 27.9 98 0.0021 25.2 4.0 16 211-226 38-53 (74)
209 PLN02177 glycerol-3-phosphate 27.6 32 0.0007 37.1 1.5 23 268-290 124-147 (497)
210 KOG1615 Phosphoserine phosphat 27.0 2E+02 0.0044 28.0 6.5 97 251-349 88-200 (227)
211 cd01615 CIDE_N CIDE_N domain, 26.3 1E+02 0.0022 25.3 3.9 15 211-225 40-54 (78)
212 PF02017 CIDE-N: CIDE-N domain 26.2 49 0.0011 27.1 2.0 15 211-225 40-54 (78)
213 PF06941 NT5C: 5' nucleotidase 26.1 40 0.00086 30.9 1.6 16 211-226 2-17 (191)
214 cd06536 CIDE_N_ICAD CIDE_N dom 26.0 1E+02 0.0022 25.5 3.8 16 211-226 42-57 (80)
215 TIGR01459 HAD-SF-IIA-hyp4 HAD- 25.5 6.4 0.00014 37.5 -3.9 88 253-342 140-235 (242)
216 PLN02499 glycerol-3-phosphate 22.0 57 0.0012 35.4 2.1 23 268-290 110-133 (498)
217 TIGR01458 HAD-SF-IIA-hyp3 HAD- 21.8 7.4 0.00016 37.7 -4.2 91 254-345 123-221 (257)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=4.7e-48 Score=374.22 Aligned_cols=181 Identities=59% Similarity=1.007 Sum_probs=173.2
Q ss_pred CCCCCCCCCCCcEEEEeCCccccccc--cCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchH
Q 015573 201 LLPKQTRSCPPTTLVLDLDETLVHST--LEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSI 278 (404)
Q Consensus 201 lLP~~~~~~~kktLVLDLDeTLVhS~--~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~ 278 (404)
++|......+|+|||||||||||||+ .++...+++.+++.+....+.+||.+|||+++||+.++++||++||||+...
T Consensus 79 ~~~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~ 158 (262)
T KOG1605|consen 79 VLPLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEV 158 (262)
T ss_pred cCCcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHH
Confidence 45666667889999999999999999 6777789999999999889999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCccccccccccccccccccCCCCcHHHHh
Q 015573 279 YAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLL 358 (404)
Q Consensus 279 YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f~gd~~D~eLl~ 358 (404)
||.+|++.||+.+++|++|+||++|....|+|+|||+.+|+|+++||||||+|.+|.+||+|||||++|++|+.|+||++
T Consensus 159 Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~ 238 (262)
T KOG1605|consen 159 YADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLK 238 (262)
T ss_pred HHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHHH
Confidence 99999999999888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCchHHHHhhhc
Q 015573 359 LLPFLESLVGVEDVRPLIVQKFN 381 (404)
Q Consensus 359 LlpfLe~L~~~~DVR~vL~~~f~ 381 (404)
|+|||+.|+.++|||++++++|+
T Consensus 239 LlpfLe~L~~~~Dvr~~l~~~~~ 261 (262)
T KOG1605|consen 239 LLPFLEALAFVDDVRPILARRFG 261 (262)
T ss_pred HHHHHHHhcccccHHHHHHHhhc
Confidence 99999999999999999999885
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=9.1e-41 Score=302.16 Aligned_cols=161 Identities=55% Similarity=0.882 Sum_probs=152.4
Q ss_pred CcEEEEeCCccccccccCCCC-CCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCD-DADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~-~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
|+|||||||||||||++.+.. ..++.+.+.++.....+||++|||+.+||++|+++|||+|||++.+.||++|++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 579999999999999987765 6777777777777889999999999999999999999999999999999999999999
Q ss_pred CCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCccccccccccccccccccCCCCcHHHHhHHHHHhhccCC
Q 015573 290 KRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLLLLPFLESLVGV 369 (404)
Q Consensus 290 ~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f~gd~~D~eLl~LlpfLe~L~~~ 369 (404)
.+.+|.+++||++|...+|.|+|||+.+|+++++||+|||+|..|..|++|||+|.+|.|+.+|++|..|++||+.|+.+
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC
Q 015573 370 ED 371 (404)
Q Consensus 370 ~D 371 (404)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 76
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=1.6e-38 Score=282.96 Aligned_cols=158 Identities=51% Similarity=0.866 Sum_probs=129.0
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCC
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKR 291 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~ 291 (404)
|||||||||||||+........++... . ....++|++|||+++||++|+++|||+|||++++.||++|++.|||.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 689999999999998754432222211 2 456788999999999999999999999999999999999999999988
Q ss_pred CeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCccccccccccccccccccCC-CCcHHHHhHHHHHhhccCCC
Q 015573 292 KLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDD-RSDQELLLLLPFLESLVGVE 370 (404)
Q Consensus 292 ~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f~gd-~~D~eLl~LlpfLe~L~~~~ 370 (404)
.+|.++++|++|....|.++|||+.+|+++++||||||+|.+|..|++|+|+|++|.++ ++|++|..|++||+.|+.++
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~ 156 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED 156 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence 89999999999999988889999999999999999999999999999999999999999 99999999999999999999
Q ss_pred Cch
Q 015573 371 DVR 373 (404)
Q Consensus 371 DVR 373 (404)
|||
T Consensus 157 Dvr 159 (159)
T PF03031_consen 157 DVR 159 (159)
T ss_dssp -CH
T ss_pred CCC
Confidence 998
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=1.1e-36 Score=284.36 Aligned_cols=156 Identities=26% Similarity=0.375 Sum_probs=133.6
Q ss_pred CCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCC
Q 015573 210 PPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
+|+||||||||||||+.+. ..+.++.+|||+++||++|+++|||+||||++..||+++++.|++
T Consensus 20 ~kklLVLDLDeTLvh~~~~----------------~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 20 GKKLLVLDIDYTLFDHRSP----------------AETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCcEEEEeCCCceEccccc----------------CCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcc
Confidence 5899999999999997431 113567899999999999999999999999999999999999976
Q ss_pred CC-CeeeEEEEeccee------eecCc-eeeccccc------CCCCCcEEEEECCccccccccccccccccccC----CC
Q 015573 290 KR-KLFRHRVFRESCV------FVDGN-YLKDLSVL------GRDLSHVIIVDNSPQAFGFQVDNGIPIESWFD----DR 351 (404)
Q Consensus 290 ~~-~lF~~rL~Rd~C~------~~~g~-yvKDLs~L------grdls~vIIVDDsp~s~~~qp~NgI~I~~f~g----d~ 351 (404)
.. .-+..++++++|. ...|. ++|||+.+ +.++++||||||+|.+|.+||+|||+|++|++ +.
T Consensus 84 ~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~~~ 163 (195)
T TIGR02245 84 LTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHANRG 163 (195)
T ss_pred cCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCCCc
Confidence 32 2345566778884 23455 59999987 23889999999999999999999999999995 57
Q ss_pred CcHHHHhHHHHHhhccCCCCchHHHHhhhc
Q 015573 352 SDQELLLLLPFLESLVGVEDVRPLIVQKFN 381 (404)
Q Consensus 352 ~D~eLl~LlpfLe~L~~~~DVR~vL~~~f~ 381 (404)
+|+||+.|++||+.|+.++|||+++.+.|.
T Consensus 164 ~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 164 TDQELLKLTQYLKTIAELEDFSSLDHKEWE 193 (195)
T ss_pred ccHHHHHHHHHHHHHhcCcccchhhhcccc
Confidence 999999999999999999999999998773
No 5
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=1.8e-33 Score=279.58 Aligned_cols=160 Identities=36% Similarity=0.613 Sum_probs=149.5
Q ss_pred CCCCCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHH
Q 015573 206 TRSCPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLN 285 (404)
Q Consensus 206 ~~~~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd 285 (404)
+..++++||||+|.++|||..|. ...+|.+++|||++.||..|+++|||||||+.+..||.+|++
T Consensus 184 Py~Qp~yTLVleledvLVhpdws---------------~~tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d 248 (393)
T KOG2832|consen 184 PYEQPPYTLVLELEDVLVHPDWS---------------YKTGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLD 248 (393)
T ss_pred cccCCCceEEEEeeeeEeccchh---------------hhcCceeccCchHHHHHHhhcccceEEEEecCCccchhhhHh
Confidence 34578999999999999999872 236788999999999999999999999999999999999999
Q ss_pred HhCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCccccccccccccccccccCCCCcHHHHhHHHHHhh
Q 015573 286 VLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLLLLPFLES 365 (404)
Q Consensus 286 ~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f~gd~~D~eLl~LlpfLe~ 365 (404)
.|||++ +++++|+|++|.+.+|.++|||+.|+||+.+||+||-.+.++.+||+|+|++++|.|+.+|+.|.+|++||+.
T Consensus 249 ~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~~ 327 (393)
T KOG2832|consen 249 ALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLEY 327 (393)
T ss_pred hcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHHH
Confidence 999996 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc--CCCCchHHHHhhhc
Q 015573 366 LV--GVEDVRPLIVQKFN 381 (404)
Q Consensus 366 L~--~~~DVR~vL~~~f~ 381 (404)
|+ +++|||++|+..-+
T Consensus 328 ia~~~~eDvR~vL~~y~~ 345 (393)
T KOG2832|consen 328 IAQQQVEDVRPVLQSYSQ 345 (393)
T ss_pred HHHccHHHHHHHHHHhcc
Confidence 86 78999999875443
No 6
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=4.4e-31 Score=238.46 Aligned_cols=137 Identities=31% Similarity=0.468 Sum_probs=117.3
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCcc------------ceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCc
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFT------------FPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQ 276 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~------------~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~ 276 (404)
.+|++||||||||||||+..+....... -...|.......++++|||+.+||++|++.|+++|||++.
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~~ 83 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMGT 83 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCCc
Confidence 4699999999999999987654322111 1123444466789999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCeeeEE-EEecceeeecCceeeccc-ccCCCCCcEEEEECCcccccccccccccccccc
Q 015573 277 SIYAEQLLNVLDPKRKLFRHR-VFRESCVFVDGNYLKDLS-VLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWF 348 (404)
Q Consensus 277 k~YA~~VLd~LDP~~~lF~~r-L~Rd~C~~~~g~yvKDLs-~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f~ 348 (404)
+.||++|++.|||.+.+|.++ ++|++|. |.++|||+ .+|++++++|||||+|.+|..||+|+|+|++|.
T Consensus 84 ~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 84 RAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred HHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 999999999999998899665 5699996 78999995 569999999999999999999999999999995
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.95 E-value=2.3e-28 Score=247.85 Aligned_cols=172 Identities=48% Similarity=0.819 Sum_probs=162.0
Q ss_pred CCCCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHH
Q 015573 207 RSCPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 207 ~~~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~ 286 (404)
...++++|++|||+||+||...-+...+|...+......+.+||.+||++++||..++++|++++||++.+.||++|++.
T Consensus 208 ~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~d~ 287 (390)
T COG5190 208 STSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVLDI 287 (390)
T ss_pred CCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcchHHHh
Confidence 34578999999999999999877777788777777777899999999999999999999999999999999999999999
Q ss_pred hCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCccccccccccccccccccCCCCcHHHHhHHHHHhhc
Q 015573 287 LDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLLLLPFLESL 366 (404)
Q Consensus 287 LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f~gd~~D~eLl~LlpfLe~L 366 (404)
|++.+ .|.+++||++|....|.|+|||..+++++.+|||||++|.+|.++|+|+|+|++|.+++.|.+|+.|++||+.|
T Consensus 288 l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ll~~le~L 366 (390)
T COG5190 288 LDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFLEDL 366 (390)
T ss_pred ccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhhhccccccc
Confidence 99998 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC--CCCchHHHHhh
Q 015573 367 VG--VEDVRPLIVQK 379 (404)
Q Consensus 367 ~~--~~DVR~vL~~~ 379 (404)
.. +.||+.++..+
T Consensus 367 ~~~~~~d~~~~l~~~ 381 (390)
T COG5190 367 PDRDLKDVSSILQSR 381 (390)
T ss_pred ccccchhhhhhhhhh
Confidence 86 89999998654
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.95 E-value=3.1e-27 Score=209.96 Aligned_cols=145 Identities=52% Similarity=0.904 Sum_probs=128.9
Q ss_pred CCcEEEEeCCcccccccc---CCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHH
Q 015573 210 PPTTLVLDLDETLVHSTL---EPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~---~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~ 286 (404)
+|++|||||||||||+.. .+.....+...+.+......+++.+|||+.+||++|++.|+|+|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 478999999999999963 22333444555556677778999999999999999999999999999999999999999
Q ss_pred hCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCccccccccccccccccccCCCCcH
Q 015573 287 LDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQ 354 (404)
Q Consensus 287 LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f~gd~~D~ 354 (404)
+++...+|..++++++|...++.|.|+|+.+|+++++||+|||++..|..++.|||+|++|.++.+|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99976677999999999998888999999999999999999999999999999999999999998874
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.67 E-value=1.1e-16 Score=170.83 Aligned_cols=135 Identities=30% Similarity=0.435 Sum_probs=105.0
Q ss_pred CcEEEEeCCccccccccCCCC---------CCC----ccceeeec--cccceEEEEecCcHHHHHHHhhccceEEEEcCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCD---------DAD----FTFPVNFN--LQKHTVYVRCRPYLKDFLERVSSLFEIIIFTAS 275 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~---------~~d----~~~~v~~~--~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs 275 (404)
++.||+|||.||+|++..+.- ... -.-...++ .....+||++||++.+||+++++.|||+|||.+
T Consensus 146 ~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyTmg 225 (635)
T KOG0323|consen 146 KLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYTMG 225 (635)
T ss_pred cceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEecc
Confidence 369999999999998753211 000 00011222 233468999999999999999999999999999
Q ss_pred chHHHHHHHHHhCCCCCeeeEEEE-ecceeeecCceeeccccc-CCCCCcEEEEECCcccccccccccccccccc
Q 015573 276 QSIYAEQLLNVLDPKRKLFRHRVF-RESCVFVDGNYLKDLSVL-GRDLSHVIIVDNSPQAFGFQVDNGIPIESWF 348 (404)
Q Consensus 276 ~k~YA~~VLd~LDP~~~lF~~rL~-Rd~C~~~~g~yvKDLs~L-grdls~vIIVDDsp~s~~~qp~NgI~I~~f~ 348 (404)
.+.||..|++.|||.+.||.+|++ |+.-. ..-.+||..+ -++.+++|||||+..+|..++.|.|.|.+|.
T Consensus 226 ~R~YA~~i~~liDP~~~lF~dRIisrde~~---~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~ 297 (635)
T KOG0323|consen 226 TRDYALEIAKLIDPEGKYFGDRIISRDESP---FFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP 297 (635)
T ss_pred chHHHHHHHHHhCCCCccccceEEEecCCC---cccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence 999999999999999999998877 76621 1225666665 3566779999999999999999999999983
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.75 E-value=2.5e-08 Score=92.14 Aligned_cols=138 Identities=14% Similarity=0.083 Sum_probs=92.5
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeec---cccceEEEEecCcHHHHHHHhh-ccceEEEEcCC-chHHHHHHHHH
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFN---LQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTAS-QSIYAEQLLNV 286 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~---~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs-~k~YA~~VLd~ 286 (404)
..+|||||+||..-..-..-..-+...-..+ ...+...+.++||+.++|+.|. +++.+.|.|++ ...++..+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~ 82 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT 82 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence 5789999999965432111110000000000 0123345778999999999998 78999999988 99999999999
Q ss_pred hCCC--C------CeeeEEEEecceeeecC--ceeecccc-c--CCCCCcEEEEECCccccccccccccccccccC
Q 015573 287 LDPK--R------KLFRHRVFRESCVFVDG--NYLKDLSV-L--GRDLSHVIIVDNSPQAFGFQVDNGIPIESWFD 349 (404)
Q Consensus 287 LDP~--~------~lF~~rL~Rd~C~~~~g--~yvKDLs~-L--grdls~vIIVDDsp~s~~~qp~NgI~I~~f~g 349 (404)
++.. + .+|+.++..+.....+. ...+.+.. + |.++++||+|||++........+|+.+.-...
T Consensus 83 ~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 83 FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 9865 1 37888777554221111 11222322 2 58899999999999999888899998866643
No 11
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.74 E-value=3.1e-09 Score=103.35 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=85.0
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|+.|. .+|.++|.|++...++..+++.++... +|+.++..+++...+.. |.+-+..+|.++++||
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 456899999999999 679999999999999999999998765 89999998887655553 7888999999999999
Q ss_pred EEECCccccccccccccccccccC
Q 015573 326 IVDNSPQAFGFQVDNGIPIESWFD 349 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~~f~g 349 (404)
+|+|++.........|+.+....+
T Consensus 187 ~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 187 VFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEec
Confidence 999999888777788887654433
No 12
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.68 E-value=4.4e-09 Score=107.93 Aligned_cols=98 Identities=13% Similarity=0.109 Sum_probs=84.7
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.+||+.|. +.+.++|.|++...+++.+++.++..+ ||+.++..+++...+.. |.+.+..+|.++++||
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 456899999999998 779999999999999999999998765 89999998887665553 7889999999999999
Q ss_pred EEECCcccccccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPIESWF 348 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~~f~ 348 (404)
+|+|++.........|+......
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV~ 316 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAVA 316 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEC
Confidence 99999988877777787765554
No 13
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.66 E-value=1.2e-08 Score=88.95 Aligned_cols=110 Identities=17% Similarity=0.183 Sum_probs=76.4
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCC-chHHHHHHHHHhCC
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTAS-QSIYAEQLLNVLDP 289 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs-~k~YA~~VLd~LDP 289 (404)
+.||+||||||+....... ..+-.. +. . ...||+.++|++|+ +++.++|.|++ ...++..+++.+++
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~~----~~--~----~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPII----DL--E----VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcch----hh--H----HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 4689999999987621000 000000 00 0 46899999999998 68999999999 89999999998762
Q ss_pred ------CCCeeeEEEEecceeeecCceeecccccC--CCCCcEEEEECCccc
Q 015573 290 ------KRKLFRHRVFRESCVFVDGNYLKDLSVLG--RDLSHVIIVDNSPQA 333 (404)
Q Consensus 290 ------~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lg--rdls~vIIVDDsp~s 333 (404)
-..+|......+.. .....|.+-+..+| ..+++|++|||++..
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n 120 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDN 120 (128)
T ss_pred cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhH
Confidence 12356555544322 11113778888889 999999999999875
No 14
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.62 E-value=3.3e-08 Score=91.71 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=80.9
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecC---ceeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDG---NYLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g---~yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|+.|. +.+.++|.|++...++..+++.++... +|+..+..+++...+. .|.+-+..+|.++++++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence 567899999999998 679999999999999999999998775 8988888777665443 36788888999999999
Q ss_pred EEECCccccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~ 345 (404)
+|+|++.-+..-..+|++..
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred EECCCHHHHHHHHHCCCeEE
Confidence 99999988877777888754
No 15
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.60 E-value=8.8e-09 Score=97.62 Aligned_cols=99 Identities=19% Similarity=0.237 Sum_probs=87.9
Q ss_pred EEecCcHHHHHHHhhcc-ceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVSSL-FEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~-yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.+||+.|... .-+++-|++.+..+..+|..++..+ +|..++++++....+.. |++.++.||.++++||
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 57799999999999955 9999999999999999999999876 89999999988877665 9999999999999999
Q ss_pred EEECCccccccccccccccccccC
Q 015573 326 IVDNSPQAFGFQVDNGIPIESWFD 349 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~~f~g 349 (404)
+|||++.....-..-|+.+..+.+
T Consensus 164 viEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 164 VVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEecchhHHHHHHHCCCEEEEecC
Confidence 999999988777777777777765
No 16
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.59 E-value=2e-08 Score=95.05 Aligned_cols=93 Identities=14% Similarity=0.095 Sum_probs=79.3
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|+.|. +++.++|.|++...++...++.++... +|+.++..++....+.. |.+-++.+|.++++||
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 456899999999999 679999999999999999999988654 89888877766555543 7888899999999999
Q ss_pred EEECCccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIP 343 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~ 343 (404)
+|+|++........+|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999888777788886
No 17
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.56 E-value=1.4e-08 Score=93.60 Aligned_cols=96 Identities=17% Similarity=0.155 Sum_probs=80.5
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|++|. +.+.++|.|.+...++..+++.++..+ +|+..+..+++...+.+ |.+-+..+|.++++||
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 567899999999998 679999999999999999999998875 88888877776544433 6777888999999999
Q ss_pred EEECCcccccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPIES 346 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~~ 346 (404)
+|+|++.-+.....+|++...
T Consensus 153 ~igD~~~Di~aA~~~Gi~~i~ 173 (205)
T TIGR01454 153 MVGDAVTDLASARAAGTATVA 173 (205)
T ss_pred EEcCCHHHHHHHHHcCCeEEE
Confidence 999999877777788887643
No 18
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.56 E-value=3.5e-08 Score=91.38 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=77.9
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+.+.||+.++|++|. +.+.++|.|++...++...++.++... +|+.++..+.....+.. |.+-++.+|.+++++|
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 567999999999998 569999999999999999999998765 89888888776655543 7888999999999999
Q ss_pred EEECCc-cccccccccccccc
Q 015573 326 IVDNSP-QAFGFQVDNGIPIE 345 (404)
Q Consensus 326 IVDDsp-~s~~~qp~NgI~I~ 345 (404)
+|+|++ .-.......|+...
T Consensus 172 ~igDs~~~di~~A~~aG~~~i 192 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTV 192 (221)
T ss_pred EECCChHHHHHHHHHCCCEEE
Confidence 999998 45544445555543
No 19
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.55 E-value=2.6e-08 Score=91.58 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=80.2
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|+.|. +.+.++|.|++...++..+++.++..+ +|+..+..+.....+.. |.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 567999999999998 679999999999999999999998765 78877776655444433 7788889999999999
Q ss_pred EEECCccccccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~~f 347 (404)
+|+|++.-+..-...|++....
T Consensus 163 ~igDs~~d~~aa~~aG~~~i~v 184 (213)
T TIGR01449 163 YVGDSRVDIQAARAAGCPSVLL 184 (213)
T ss_pred EeCCCHHHHHHHHHCCCeEEEE
Confidence 9999998886666777776543
No 20
>PRK11587 putative phosphatase; Provisional
Probab=98.52 E-value=1.1e-07 Score=88.87 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=78.0
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|+.|. +.+.++|.|++...++..+++..... +|...+..+++...++. |.+.+..+|..++++|
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV 159 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence 567999999999998 78999999999988888888877652 46666777766555543 7888899999999999
Q ss_pred EEECCccccccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~~f 347 (404)
+|+|++.........|+...-+
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v 181 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAV 181 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEE
Confidence 9999998887777778865444
No 21
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.51 E-value=7.8e-08 Score=90.91 Aligned_cols=96 Identities=13% Similarity=0.047 Sum_probs=79.0
Q ss_pred EEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcE
Q 015573 249 YVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHV 324 (404)
Q Consensus 249 ~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~v 324 (404)
.+...||+.++|+.|. +.+.++|.|++...++..+++.++... +|...+..+++...+.. |.+-++.+|.++++|
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~ 171 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC 171 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence 3567999999999998 669999999999999999999988765 78777777766544443 778888999999999
Q ss_pred EEEECCccccccccccccccc
Q 015573 325 IIVDNSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 325 IIVDDsp~s~~~qp~NgI~I~ 345 (404)
|+|+|++.-...-...|+...
T Consensus 172 l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 172 VYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred EEeCCCHHHHHHHHHCCCcEE
Confidence 999999987766666777654
No 22
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.50 E-value=5.7e-08 Score=86.56 Aligned_cols=91 Identities=22% Similarity=0.263 Sum_probs=72.4
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecC---ceeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDG---NYLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g---~yvKDLs~Lgrdls~vI 325 (404)
+...||+.+||+.|+ ..+.++|.|++...+ ..++..++..+ +|+.+++.++....+. .|..-++.+|.+++++|
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 467899999999998 679999999999988 66666677765 7888888776665553 37777888999999999
Q ss_pred EEECCcccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGI 342 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI 342 (404)
+|||++.....-...|+
T Consensus 162 ~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGM 178 (183)
T ss_pred EEcCCHHHHHHHHHcCC
Confidence 99999876654444554
No 23
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.47 E-value=7.2e-08 Score=87.12 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=77.7
Q ss_pred EecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEEEE
Q 015573 251 RCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVIIV 327 (404)
Q Consensus 251 ~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vIIV 327 (404)
..-|+ .+.|+.+.+.+.++|.|++...+++.+++.++..+ +|+.++..+++...+.. |...++++|.++++||+|
T Consensus 88 ~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i 165 (188)
T PRK10725 88 EPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVF 165 (188)
T ss_pred CCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 34576 48999998779999999999999999999998765 89998888887665554 778888999999999999
Q ss_pred ECCccccccccccccccc
Q 015573 328 DNSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 328 DDsp~s~~~qp~NgI~I~ 345 (404)
+|++..+......|++..
T Consensus 166 gDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 166 EDADFGIQAARAAGMDAV 183 (188)
T ss_pred eccHhhHHHHHHCCCEEE
Confidence 999988877777777653
No 24
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.46 E-value=5.6e-08 Score=88.14 Aligned_cols=91 Identities=24% Similarity=0.267 Sum_probs=73.3
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceee----ecC---ceeecccccCCCCC
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVF----VDG---NYLKDLSVLGRDLS 322 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~----~~g---~yvKDLs~Lgrdls 322 (404)
+...||+.++|+.|. +.++|.|++...++..+++.++... +|+.++..++... .+. .|..-+..+|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 345799999999998 6899999999999999999998764 8988888766543 233 37788888999999
Q ss_pred cEEEEECCccccccccccccc
Q 015573 323 HVIIVDNSPQAFGFQVDNGIP 343 (404)
Q Consensus 323 ~vIIVDDsp~s~~~qp~NgI~ 343 (404)
++++|+|++.........|+.
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCE
Confidence 999999998766555556654
No 25
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.46 E-value=3.5e-07 Score=78.75 Aligned_cols=112 Identities=19% Similarity=0.162 Sum_probs=78.5
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCc--------hHHHHH
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQ--------SIYAEQ 282 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~--------k~YA~~ 282 (404)
+.|+||+||||++... ... .. ......|++.++|++|. +.+.++|.|.+. ..++..
T Consensus 1 k~~~~D~dgtL~~~~~--~~~-----------~~--~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVP--YVD-----------DE--DERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCC--CCC-----------CH--HHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence 4799999999996411 100 00 11246899999999998 779999999998 888999
Q ss_pred HHHHhCCCCCeeeEEEEecceeeecC---ceeeccccc-CCCCCcEEEEEC-Cccccccccccccc
Q 015573 283 LLNVLDPKRKLFRHRVFRESCVFVDG---NYLKDLSVL-GRDLSHVIIVDN-SPQAFGFQVDNGIP 343 (404)
Q Consensus 283 VLd~LDP~~~lF~~rL~Rd~C~~~~g---~yvKDLs~L-grdls~vIIVDD-sp~s~~~qp~NgI~ 343 (404)
+++.++.. |...++.. ...+. .|.+-++.+ +.+++++|+|+| ...-......+|+.
T Consensus 66 ~l~~~~l~---~~~~~~~~--~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 66 RLEELGVP---IDVLYACP--HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHCCCC---EEEEEECC--CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 99998764 22233333 12222 367778888 599999999999 57666555555554
No 26
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.42 E-value=2e-07 Score=88.95 Aligned_cols=97 Identities=11% Similarity=-0.006 Sum_probs=80.5
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCee-eEEEEecceeeecCc---eeecccccCC-CCCc
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLF-RHRVFRESCVFVDGN---YLKDLSVLGR-DLSH 323 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF-~~rL~Rd~C~~~~g~---yvKDLs~Lgr-dls~ 323 (404)
+...||+.++|++|. +.+.++|-|++...+++.+++.++..+ +| +.++..+.....+++ |.+-+..+|. ++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~-~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 176 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG-YRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA 176 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC-CCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence 466899999999998 679999999999999999999988766 54 777777766555543 7888899998 4999
Q ss_pred EEEEECCccccccccccccccccc
Q 015573 324 VIIVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 324 vIIVDDsp~s~~~qp~NgI~I~~f 347 (404)
||+|.|++.-...-...|+.....
T Consensus 177 ~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 177 CVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred eEEECCcHHHHHHHHHCCCeEEEE
Confidence 999999998887777888876554
No 27
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.39 E-value=4e-07 Score=75.33 Aligned_cols=107 Identities=21% Similarity=0.274 Sum_probs=73.9
Q ss_pred EEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhc-cceEEEEcCCchHHHHHHHHHhCCCC
Q 015573 213 TLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSS-LFEIIIFTASQSIYAEQLLNVLDPKR 291 (404)
Q Consensus 213 tLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~-~yEIvIfTAs~k~YA~~VLd~LDP~~ 291 (404)
++|||+||||+........ ...+..+|++.++|+.|.+ .+.|+|.|++...++..+++.++...
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4799999999876431000 1224569999999999995 59999999999999999999987542
Q ss_pred CeeeEEEEecceeee----------------cCc---eeecccccCCCCCcEEEEECCccccc
Q 015573 292 KLFRHRVFRESCVFV----------------DGN---YLKDLSVLGRDLSHVIIVDNSPQAFG 335 (404)
Q Consensus 292 ~lF~~rL~Rd~C~~~----------------~g~---yvKDLs~Lgrdls~vIIVDDsp~s~~ 335 (404)
+|..++..+..... ++. +..-+..++.+++.+++|+|++.-..
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~ 127 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIE 127 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHH
Confidence 44444443322211 111 33444556777899999999986543
No 28
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.37 E-value=5.8e-07 Score=81.78 Aligned_cols=115 Identities=13% Similarity=0.139 Sum_probs=78.9
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCch-------------
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQS------------- 277 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k------------- 277 (404)
+.|.||+||||+-.. + +. ...--+.+-||+.++|++|. +.|.++|.|++..
T Consensus 2 ~~~~~D~Dgtl~~~~--~-----~~--------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDH--G-----YV--------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCC--C-----CC--------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 578999999998421 1 10 00112345799999999999 7799999999874
Q ss_pred --HHHHHHHHHhCCCCCeeeEEEEec-----------ceeeecC---ceeecccccCCCCCcEEEEECCccccccccccc
Q 015573 278 --IYAEQLLNVLDPKRKLFRHRVFRE-----------SCVFVDG---NYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNG 341 (404)
Q Consensus 278 --~YA~~VLd~LDP~~~lF~~rL~Rd-----------~C~~~~g---~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~Ng 341 (404)
.|...++..+... |...++.. .|...++ .|.+-++.+|.+++++|+|+|++.-......+|
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG 143 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAK 143 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCC
Confidence 3444555544332 44444432 3333333 377888899999999999999998777677788
Q ss_pred ccc
Q 015573 342 IPI 344 (404)
Q Consensus 342 I~I 344 (404)
+..
T Consensus 144 ~~~ 146 (176)
T TIGR00213 144 VKT 146 (176)
T ss_pred CcE
Confidence 764
No 29
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.35 E-value=1.5e-07 Score=92.34 Aligned_cols=95 Identities=13% Similarity=0.104 Sum_probs=74.1
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVD 328 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVD 328 (404)
+..-||+.++|+.|. +.+.++|.|++...++..+++.++... +|+.++..+........|.+-+..+|.++++||+|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 455799999999998 779999999999999999999998765 788766544322111225556667788999999999
Q ss_pred CCccccccccccccccc
Q 015573 329 NSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 329 Dsp~s~~~qp~NgI~I~ 345 (404)
|++.-...-...|+...
T Consensus 220 Ds~~Di~aA~~AG~~~I 236 (273)
T PRK13225 220 DETRDVEAARQVGLIAV 236 (273)
T ss_pred CCHHHHHHHHHCCCeEE
Confidence 99987766666777654
No 30
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.34 E-value=5.1e-07 Score=83.83 Aligned_cols=95 Identities=15% Similarity=0.136 Sum_probs=77.6
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCC-CeeeEEEEecceeeecC---ceeecccccCCC-CCc
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKR-KLFRHRVFRESCVFVDG---NYLKDLSVLGRD-LSH 323 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~-~lF~~rL~Rd~C~~~~g---~yvKDLs~Lgrd-ls~ 323 (404)
..+.||+.++|+.|+ +.+.++|.|++...++..+|+.++... .+|+..+..++-...+. .|.+-+.++|.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 467999999999997 789999999999999999999998652 58888777665433333 267778888986 799
Q ss_pred EEEEECCcccccccccccccc
Q 015573 324 VIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 324 vIIVDDsp~s~~~qp~NgI~I 344 (404)
+|+|+|++.-...-...|+.+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999998776666778775
No 31
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.32 E-value=3.8e-07 Score=84.40 Aligned_cols=94 Identities=19% Similarity=0.228 Sum_probs=75.0
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
...+||+.+||+.+. +.+.++|.|++...++..+++.++... +|+..+..+.+...+.. |.+-+..++.+++++|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 557999999999999 679999999999999999999998754 78766655554433322 6677788899999999
Q ss_pred EEECCcccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I 344 (404)
+|+|++.-...-...|++.
T Consensus 171 ~igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 171 FVGDSRNDIQAARAAGCPS 189 (226)
T ss_pred EECCCHHHHHHHHHCCCcE
Confidence 9999988776666666643
No 32
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.31 E-value=3.2e-07 Score=88.57 Aligned_cols=98 Identities=12% Similarity=0.032 Sum_probs=78.7
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCC-CCcE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRD-LSHV 324 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrd-ls~v 324 (404)
+..-||+.++|+.|. +.+.++|-|++....+..+++.+...+..|+.++..+++...+.. |.+-++.+|.. +++|
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 456899999999998 779999999999999999999877655334777777776555443 78888899985 6999
Q ss_pred EEEECCccccccccccccccccc
Q 015573 325 IIVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 325 IIVDDsp~s~~~qp~NgI~I~~f 347 (404)
|+|+|++.-+......|+.....
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v 202 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGV 202 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEE
Confidence 99999998887777788765543
No 33
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.31 E-value=5.3e-07 Score=87.97 Aligned_cols=94 Identities=17% Similarity=0.191 Sum_probs=76.3
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+..+||+.++|+.|. +.+.++|.|.+...++..+++.++..+ +|+.++..+.+...+.. |.+-+..+|.++++||
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 456899999999998 689999999999999999999988654 78877666655443333 5677778899999999
Q ss_pred EEECCcccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I 344 (404)
+|+|++.-...-..+|+..
T Consensus 179 ~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EECCCHHHHHHHHHCCCeE
Confidence 9999998876666777753
No 34
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=98.30 E-value=1.6e-07 Score=86.65 Aligned_cols=102 Identities=12% Similarity=0.156 Sum_probs=80.1
Q ss_pred EEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcE
Q 015573 249 YVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHV 324 (404)
Q Consensus 249 ~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~v 324 (404)
+....||+.++|+.|. ++|.++|.|++....+..++.....-..+|+..++.+++...++. |..-++.+|.++++|
T Consensus 82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 3457899999999998 679999999999887766554321112478888888887776654 788899999999999
Q ss_pred EEEECCccccccccccccccccccCC
Q 015573 325 IIVDNSPQAFGFQVDNGIPIESWFDD 350 (404)
Q Consensus 325 IIVDDsp~s~~~qp~NgI~I~~f~gd 350 (404)
|+|||++.........|+...-+.+.
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 99999998877677788887655443
No 35
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.29 E-value=2.3e-06 Score=76.28 Aligned_cols=132 Identities=20% Similarity=0.110 Sum_probs=93.4
Q ss_pred EEEEeCCccccccccCCCCCCCccceeee---c--cccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHH
Q 015573 213 TLVLDLDETLVHSTLEPCDDADFTFPVNF---N--LQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 213 tLVLDLDeTLVhS~~~~~~~~d~~~~v~~---~--~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~ 286 (404)
.+|||+|+||.+- ...+.+.-|.+. + ....+.-|.++|++.+||+++. .+|-+..+|.....-|-++|.+
T Consensus 2 ~i~~d~d~t~wdh----h~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra 77 (164)
T COG4996 2 AIVFDADKTLWDH----HNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA 77 (164)
T ss_pred cEEEeCCCccccc----ccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH
Confidence 5899999999652 222222222111 0 1234567889999999999999 8899999999999999999999
Q ss_pred hCCCCCeeeEEEEecceeeecCceeeccccc------CCCCCcEEEEECCcccc---ccccccccccccccCC
Q 015573 287 LDPKRKLFRHRVFRESCVFVDGNYLKDLSVL------GRDLSHVIIVDNSPQAF---GFQVDNGIPIESWFDD 350 (404)
Q Consensus 287 LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~L------grdls~vIIVDDsp~s~---~~qp~NgI~I~~f~gd 350 (404)
||... ||.+.+...+-. ..-+..+-|+.+ ...|+++|.+||....+ .....|.=.++.|.+-
T Consensus 78 l~~~~-yFhy~ViePhP~-K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di 148 (164)
T COG4996 78 LDLLQ-YFHYIVIEPHPY-KFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDI 148 (164)
T ss_pred hchhh-hEEEEEecCCCh-hHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecch
Confidence 99886 897777665522 111222233332 45789999999999877 4566777778888664
No 36
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.28 E-value=2.2e-06 Score=79.14 Aligned_cols=117 Identities=16% Similarity=0.228 Sum_probs=65.7
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccc------cceEEEEecCcHHHHHHHhh-ccceEEEEcC-CchHHHHH
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQ------KHTVYVRCRPYLKDFLERVS-SLFEIIIFTA-SQSIYAEQ 282 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~------~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTA-s~k~YA~~ 282 (404)
++.+|||||.||... +......-|.+.... ..+.-|.+-|++.+.|+.|. ...+|++.|. ..+..|.+
T Consensus 3 PklvvFDLD~TlW~~----~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPP----WMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-----TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCch----hHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHH
Confidence 578999999999554 322222223222222 24556888999999999999 7899999995 56889999
Q ss_pred HHHHhCCC---------CCeeeEEEEecceeeecCceeeccc-ccCCCCCcEEEEECCcccc
Q 015573 283 LLNVLDPK---------RKLFRHRVFRESCVFVDGNYLKDLS-VLGRDLSHVIIVDNSPQAF 334 (404)
Q Consensus 283 VLd~LDP~---------~~lF~~rL~Rd~C~~~~g~yvKDLs-~Lgrdls~vIIVDDsp~s~ 334 (404)
+|+.|+.. ..+|++.-.-.. .+-.+.+.|. ..|.+.+.++++||.....
T Consensus 79 ~L~~l~i~~~~~~~~~~~~~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 79 LLKLLEIDDADGDGVPLIEYFDYLEIYPG---SKTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHHHTT-C----------CCECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HHHhcCCCccccccccchhhcchhheecC---chHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 99999876 125554322221 1222444444 5699999999999987654
No 37
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.28 E-value=5.4e-07 Score=79.80 Aligned_cols=117 Identities=19% Similarity=0.231 Sum_probs=79.1
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCch-------------
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQS------------- 277 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k------------- 277 (404)
++|+||+||||+......... ... .+...||+.++|+.|. +.|.++|.|+...
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~-----------~~~--~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPR-----------SLD--DWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCcccCC-----------CHH--HeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 478999999999864311000 011 1246899999999998 8899999999873
Q ss_pred --HHHHHHHHHhCCCCCeeeEEEEe-----cceeeecC---ceeecccccCCCCCcEEEEECCcccccccccccccc
Q 015573 278 --IYAEQLLNVLDPKRKLFRHRVFR-----ESCVFVDG---NYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 278 --~YA~~VLd~LDP~~~lF~~rL~R-----d~C~~~~g---~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I 344 (404)
.++..+++.++.. +...++. +.....++ .|.+-+..+|.++++||+|+|++.-.......||..
T Consensus 68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 5677778887754 2122222 22111222 266777888999999999999987766555666654
No 38
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.26 E-value=2.2e-06 Score=85.42 Aligned_cols=124 Identities=19% Similarity=0.228 Sum_probs=87.9
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEec-CcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHH
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCR-PYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~R-Pgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~ 286 (404)
.+++.+||||||||+.... -|.+| ||+.++|++|. +++.++|||++.+.++..+|+.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~ 182 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK 182 (301)
T ss_pred ccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
Confidence 3477999999999998632 13468 99999999999 5699999999999999999999
Q ss_pred hCCCCCeeeEEEEecceeeecC----------------ceeecc-----------------cccCCCC-CcEEEEECCcc
Q 015573 287 LDPKRKLFRHRVFRESCVFVDG----------------NYLKDL-----------------SVLGRDL-SHVIIVDNSPQ 332 (404)
Q Consensus 287 LDP~~~lF~~rL~Rd~C~~~~g----------------~yvKDL-----------------s~Lgrdl-s~vIIVDDsp~ 332 (404)
++..+ +|+.++..++....++ .+..|. ...|... +-+.+|||-+.
T Consensus 183 lGLd~-YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~ 261 (301)
T TIGR01684 183 VKLDR-YFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLAD 261 (301)
T ss_pred cCCCc-ccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCcc
Confidence 99876 8877777655443321 123333 2224432 34568888775
Q ss_pred ccccccccccccccccCCCCcHH
Q 015573 333 AFGFQVDNGIPIESWFDDRSDQE 355 (404)
Q Consensus 333 s~~~qp~NgI~I~~f~gd~~D~e 355 (404)
. -+.-+|-+.+...--..+|..
T Consensus 262 N-n~~YD~fv~v~rcp~P~~DW~ 283 (301)
T TIGR01684 262 N-NFNYDYFVNVSRCPVPVNDWD 283 (301)
T ss_pred c-CccceeEEEeeeCCCCchHHH
Confidence 3 345677777776665555554
No 39
>PLN02940 riboflavin kinase
Probab=98.23 E-value=3.8e-07 Score=93.44 Aligned_cols=97 Identities=11% Similarity=0.106 Sum_probs=80.3
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHH-HhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLN-VLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHV 324 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd-~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~v 324 (404)
+...||+.++|+.|. +.+.++|.|++...++..+++ ..+... +|+.++..+++...+.+ |...++.+|..+++|
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~-~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKE-SFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHh-hCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 456899999999998 779999999999999999887 566544 89999998887765543 788889999999999
Q ss_pred EEEECCccccccccccccccccc
Q 015573 325 IIVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 325 IIVDDsp~s~~~qp~NgI~I~~f 347 (404)
|+|+|++.........|+...-.
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v 193 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAV 193 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEE
Confidence 99999998876666777775433
No 40
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.22 E-value=5.4e-06 Score=82.72 Aligned_cols=125 Identities=17% Similarity=0.220 Sum_probs=89.4
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEec-CcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHH
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCR-PYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~R-Pgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~ 286 (404)
..++.+||||||||+.... -|.+| |++.++|++|. +++.++|+|++.+.++..+|+.
T Consensus 126 ~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~ 184 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE 184 (303)
T ss_pred eeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH
Confidence 4578999999999998732 13468 99999999999 6799999999999999999999
Q ss_pred hCCCCCeeeEEEEecceeeec----------------Cceeeccc-----------------ccCCCC-CcEEEEECCcc
Q 015573 287 LDPKRKLFRHRVFRESCVFVD----------------GNYLKDLS-----------------VLGRDL-SHVIIVDNSPQ 332 (404)
Q Consensus 287 LDP~~~lF~~rL~Rd~C~~~~----------------g~yvKDLs-----------------~Lgrdl-s~vIIVDDsp~ 332 (404)
++..+ +|+.++..++..... ..+..|.. ..|... +-+.+|||-+.
T Consensus 185 lgL~~-yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~ 263 (303)
T PHA03398 185 TKLEG-YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKS 263 (303)
T ss_pred cCCCc-cccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCcc
Confidence 99875 787777665544322 12333433 224432 34567887775
Q ss_pred ccccccccccccccccCCCCcHHH
Q 015573 333 AFGFQVDNGIPIESWFDDRSDQEL 356 (404)
Q Consensus 333 s~~~qp~NgI~I~~f~gd~~D~eL 356 (404)
. -+.-+|-+.+...-...+|-+.
T Consensus 264 N-n~~YD~fv~v~rcp~P~~DW~~ 286 (303)
T PHA03398 264 N-NYSYDYFVNVKRCPEPVNDWDK 286 (303)
T ss_pred c-CccceeEEEeeeCCCCcHHHHH
Confidence 4 4567888888777666666553
No 41
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.21 E-value=2.4e-06 Score=77.87 Aligned_cols=117 Identities=13% Similarity=0.068 Sum_probs=79.4
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCch------------
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQS------------ 277 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k------------ 277 (404)
.|.|+||+||||+.... . | ..... .+...||+.++|++|+ +.|.++|.|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~-~-----~------~~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD-G-----Y------VKSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCc-c-----c------cCCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 47899999999865421 0 0 00111 1346899999999999 5699999998763
Q ss_pred ---HHHHHHHHHhCCCCCeeeEEEEecc-----eeeecC---ceeecccccCCCCCcEEEEECCcccccccccccccc
Q 015573 278 ---IYAEQLLNVLDPKRKLFRHRVFRES-----CVFVDG---NYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 278 ---~YA~~VLd~LDP~~~lF~~rL~Rd~-----C~~~~g---~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I 344 (404)
.+...+++.++. .|...++... +...+. .|.+.+..+|.+++++++|+|++.-...-...|+..
T Consensus 69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~ 143 (181)
T PRK08942 69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTP 143 (181)
T ss_pred HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence 334445555543 3666666433 223333 277888889999999999999997776666667643
No 42
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.20 E-value=2.6e-07 Score=86.03 Aligned_cols=95 Identities=9% Similarity=0.085 Sum_probs=77.0
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeee-EEEEecceeeecC---ceeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFR-HRVFRESCVFVDG---NYLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~-~rL~Rd~C~~~~g---~yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|+.|. +.++|.|++.+.+++.+|+.++... +|. .++..++....+. .|..-+..+|..+++||
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 456899999999994 8999999999999999999988765 785 4556655554444 37888889999999999
Q ss_pred EEECCccccccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~~f 347 (404)
+|+|++.........|+++.-+
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEE
Confidence 9999998877666788877544
No 43
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.19 E-value=2.5e-06 Score=77.55 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=88.5
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCC---------------
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTAS--------------- 275 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs--------------- 275 (404)
+.+.||.||||++.... .|. ....-.+..-||+.++|++|. +.|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~-----~~~-------~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS-----DFQ-------VDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCC-----ccc-------cCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 57999999999884210 110 011113466899999999999 67999999996
Q ss_pred chHHHHHHHHHhCCCCCeeeEEEEe-----cceeeecCc---eeecccccCCCCCcEEEEECCccccccccccccccccc
Q 015573 276 QSIYAEQLLNVLDPKRKLFRHRVFR-----ESCVFVDGN---YLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 276 ~k~YA~~VLd~LDP~~~lF~~rL~R-----d~C~~~~g~---yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f 347 (404)
...++..+++.++.. |+..++. +++...++. +..-++.+|.+++++++|.|+..-......+|+....+
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 356888899998874 7666653 555554443 55666778999999999999987666666788877655
Q ss_pred c
Q 015573 348 F 348 (404)
Q Consensus 348 ~ 348 (404)
.
T Consensus 147 ~ 147 (161)
T TIGR01261 147 D 147 (161)
T ss_pred C
Confidence 4
No 44
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.17 E-value=5.5e-07 Score=83.56 Aligned_cols=94 Identities=14% Similarity=0.245 Sum_probs=69.5
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEeccee---e-------e--cC-ceeeccc
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCV---F-------V--DG-NYLKDLS 315 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~---~-------~--~g-~yvKDLs 315 (404)
+..+||+.+||+.|. +.+.++|.|++...++..+++.++... +|...+.-++.. . . ++ .|.+-++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 457999999999999 579999999999999999999988665 665443322111 0 0 11 1445556
Q ss_pred ccCCCCCcEEEEECCcccccccccccccc
Q 015573 316 VLGRDLSHVIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 316 ~Lgrdls~vIIVDDsp~s~~~qp~NgI~I 344 (404)
.+|.++++||+|+|++.-...-...|+.|
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 77889999999999987776555666766
No 45
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.17 E-value=1.3e-06 Score=76.64 Aligned_cols=80 Identities=16% Similarity=0.122 Sum_probs=64.9
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
....||+.++|+.|. +.+.++|.|++.+.++..+++.+ .. .+|...+..+++. .+.. |.+-++.+|.++ +||
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LG-DYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HH-hcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEE
Confidence 445699999999997 77999999999999999999985 33 3787777777665 4433 677788889988 999
Q ss_pred EEECCccc
Q 015573 326 IVDNSPQA 333 (404)
Q Consensus 326 IVDDsp~s 333 (404)
+|.|++.-
T Consensus 139 ~iGDs~~D 146 (154)
T TIGR01549 139 HVGDNLND 146 (154)
T ss_pred EEeCCHHH
Confidence 99999743
No 46
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.14 E-value=8.2e-07 Score=81.36 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=68.7
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCC---CeeeEEEEecceeeecCceeecccccCCCCCcEEE
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKR---KLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVII 326 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~---~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vII 326 (404)
+...||+.++|+.|.+.+.+++-|++.......+++.+...+ .+|+..+..+.+......|.+-++.+| ++.+|+
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~ 150 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF 150 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence 557999999999999777777777765555544555554322 256677766665432223667777888 788999
Q ss_pred EECCcccccccccc--ccccccc
Q 015573 327 VDNSPQAFGFQVDN--GIPIESW 347 (404)
Q Consensus 327 VDDsp~s~~~qp~N--gI~I~~f 347 (404)
|||++.....-..+ ||...-+
T Consensus 151 vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 151 VDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred eCCCHHHHHHHHHHHcCCcEEEe
Confidence 99999998777788 8887655
No 47
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.06 E-value=4.8e-06 Score=83.10 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=76.4
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHH---
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNV--- 286 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~--- 286 (404)
+|+||+|||+||..-..-....... ......|++.++|+.|. +++.++|.|......|..+++.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i------------~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~ 70 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNL------------NLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKD 70 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCcccc------------ccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcc
Confidence 7899999999997643211000000 01123789999999999 8899999999999999999998
Q ss_pred -hCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCcccc
Q 015573 287 -LDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAF 334 (404)
Q Consensus 287 -LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~ 334 (404)
+.... +|...... ......++.+-+..+|.+++.+|+|||++...
T Consensus 71 ~~~~~~-~f~~~~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 71 FILQAE-DFDARSIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred ccCcHH-HeeEEEEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence 66543 56544222 11111235666778899999999999998766
No 48
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.00 E-value=1.7e-05 Score=72.42 Aligned_cols=107 Identities=17% Similarity=0.197 Sum_probs=70.8
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchH-----------
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSI----------- 278 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~----------- 278 (404)
.++++||+||||+...... .+ ......|- ..-||+.+.|+.|. +.|.++|.|+....
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~------~~----~~~~~~~~-~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~ 81 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGK------VF----PTSASDWR-FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK 81 (166)
T ss_pred CcEEEEeCCCceEecCCCC------cc----cCChHHeE-EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence 4689999999999753210 00 00111121 23599999999997 88999999997753
Q ss_pred -HHHHHHHHhCCCCCeeeEEEEecceeeecC---ceeecccccC--CCCCcEEEEECCc
Q 015573 279 -YAEQLLNVLDPKRKLFRHRVFRESCVFVDG---NYLKDLSVLG--RDLSHVIIVDNSP 331 (404)
Q Consensus 279 -YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g---~yvKDLs~Lg--rdls~vIIVDDsp 331 (404)
++..+|+.++.. +...+..+.....+. .+..-+..+| .+++++++|.|++
T Consensus 82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 577788888863 223333333222222 3555667778 8999999999987
No 49
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.00 E-value=4.5e-06 Score=85.93 Aligned_cols=135 Identities=31% Similarity=0.504 Sum_probs=99.7
Q ss_pred CCcEEEEeCCccccccccCCCCC----------CCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHH
Q 015573 210 PPTTLVLDLDETLVHSTLEPCDD----------ADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIY 279 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~~----------~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~Y 279 (404)
++..||.|+|.|.+|+...+... ........+......++++.||++..|+...++.||+.+||.+...|
T Consensus 25 ~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~~~ 104 (390)
T COG5190 25 KKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTRAY 104 (390)
T ss_pred cccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccccc
Confidence 46779999999999998655110 01111112223356788999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCeeeEEEEecceeeecCceeeccccc-CCCCCcEEEEECCcccccc--cccccccccc
Q 015573 280 AEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVL-GRDLSHVIIVDNSPQAFGF--QVDNGIPIES 346 (404)
Q Consensus 280 A~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~L-grdls~vIIVDDsp~s~~~--qp~NgI~I~~ 346 (404)
|+.+..++||.+++|..+....+.. .+.-.|-++++ ..+-..++++||.+..|.- --.|.++..+
T Consensus 105 ~~~~~~i~d~~g~~~~d~~~~~~~~--~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v~~~~ 172 (390)
T COG5190 105 AERIAKIIDPTGKLFNDRILSRDES--GSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFVAKSP 172 (390)
T ss_pred hhhhhhccccccccccccccccccc--ccchhhhhhhcCccccccccccccccccCCccchhhhhhcccc
Confidence 9999999999999998776633322 22345777766 6788899999999999922 2245555555
No 50
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.99 E-value=4.9e-06 Score=81.21 Aligned_cols=126 Identities=15% Similarity=0.142 Sum_probs=92.9
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
++.+++|+||||........ .++. ........|++.++|+.|. +++.++|.|+.....+..+++.|+.
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~--~~~~---------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~ 226 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSP--YDWT---------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQ 226 (300)
T ss_pred CCEEEEECCCcCcCCCCCCc--cchh---------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHH
Confidence 57899999999987643111 1111 0112245999999999998 6799999999999999999999998
Q ss_pred CCCeeeEEEEecc-------eeeecCc---eeecccccCC-CCCcEEEEECCccccccccccccccccc
Q 015573 290 KRKLFRHRVFRES-------CVFVDGN---YLKDLSVLGR-DLSHVIIVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 290 ~~~lF~~rL~Rd~-------C~~~~g~---yvKDLs~Lgr-dls~vIIVDDsp~s~~~qp~NgI~I~~f 347 (404)
.+.+|+..+..+. +...+.. +.+.|..++. +++.+|+|||++.....-..+||++...
T Consensus 227 ~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 227 TDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred cCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 7667877666652 2222222 4556676777 6799999999999998888899886543
No 51
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.97 E-value=1e-05 Score=78.39 Aligned_cols=131 Identities=11% Similarity=0.047 Sum_probs=79.0
Q ss_pred CCcEEEEeCCccccccccC---CC---CCCCcccee--eecc---ccceEEEEecCcHHHHHHHhh-ccceEEEEcCC--
Q 015573 210 PPTTLVLDLDETLVHSTLE---PC---DDADFTFPV--NFNL---QKHTVYVRCRPYLKDFLERVS-SLFEIIIFTAS-- 275 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~---~~---~~~d~~~~v--~~~~---~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs-- 275 (404)
++..++|||||||++|+.- .. ...++.+.. .+.. ....-.....|++.+||+++. +.+.|+|.|+.
T Consensus 62 ~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~ 141 (237)
T TIGR01672 62 PPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTP 141 (237)
T ss_pred CCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3569999999999999751 10 110011000 0000 000112233455999999998 78999999998
Q ss_pred --chHHHHHHHHHhCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCccccccccccccccc
Q 015573 276 --QSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 276 --~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~ 345 (404)
...+++.+++.++... +|...+..+.....+. -+. ..+. ...-+|+|-|+..-+......||...
T Consensus 142 ~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~~Kp--~~~-~~l~-~~~i~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 142 GKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQYQY--TKT-QWIQ-DKNIRIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred CcCHHHHHHHHHHhCCch-heeEEECCCCCCCCCC--CHH-HHHH-hCCCeEEEeCCHHHHHHHHHCCCCEE
Confidence 6679999999998765 7765555554332111 121 1121 12337899999887766666776643
No 52
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.93 E-value=4.9e-06 Score=86.87 Aligned_cols=92 Identities=13% Similarity=0.119 Sum_probs=73.0
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceee-ecC-ceeecccccCCCCCcEEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVF-VDG-NYLKDLSVLGRDLSHVII 326 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~-~~g-~yvKDLs~Lgrdls~vII 326 (404)
+...||+.++|++|. +.+.++|.|++...++..+++.++... +|+..+..++... .+. .|.+-+..++ +++||+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEE
Confidence 456899999999998 779999999999999999999998765 8988888776532 122 2555555554 689999
Q ss_pred EECCcccccccccccccc
Q 015573 327 VDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 327 VDDsp~s~~~qp~NgI~I 344 (404)
|.|++.-+..-...|+..
T Consensus 406 VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 406 VGDRLSDINAAKDNGLIA 423 (459)
T ss_pred EeCCHHHHHHHHHCCCeE
Confidence 999998887777777764
No 53
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.84 E-value=1.3e-05 Score=69.56 Aligned_cols=94 Identities=19% Similarity=0.305 Sum_probs=79.0
Q ss_pred EEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcE
Q 015573 249 YVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHV 324 (404)
Q Consensus 249 ~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~v 324 (404)
.....||+.++|+.|+ +++.++|.|.+...++..+++.++.. .+|+..++.+++...+.+ |.+-++.+|.+++++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4678999999999999 99999999999999999999999876 489988888877765553 778888889999999
Q ss_pred EEEECCccccccccccccc
Q 015573 325 IIVDNSPQAFGFQVDNGIP 343 (404)
Q Consensus 325 IIVDDsp~s~~~qp~NgI~ 343 (404)
|+|||++.........|+.
T Consensus 154 ~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEESSHHHHHHHHHTTSE
T ss_pred EEEeCCHHHHHHHHHcCCe
Confidence 9999999766544445543
No 54
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.83 E-value=1.6e-05 Score=74.98 Aligned_cols=95 Identities=21% Similarity=0.198 Sum_probs=78.2
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
...-||+.+.|..|+ +.|.+.|.|+.....++.+++.++... +|+.++..+.+...+++ +..-+..+|.+++++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 356899999999999 889999999999999999999999876 88877774555555543 5567778888878999
Q ss_pred EEECCccccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~ 345 (404)
+|=|+..-...-...|++..
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred EECCCHHHHHHHHHcCCCEE
Confidence 99999988877777776643
No 55
>PRK06769 hypothetical protein; Validated
Probab=97.82 E-value=1.7e-05 Score=72.43 Aligned_cols=116 Identities=16% Similarity=0.136 Sum_probs=74.8
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchH--------HHH
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSI--------YAE 281 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~--------YA~ 281 (404)
-+.|+||+||||.- | .. +. +.-.+..-||+.++|++|. +.|.++|.|++... .+.
T Consensus 4 ~~~~~~d~d~~~~~--~---~~--~~---------~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~ 67 (173)
T PRK06769 4 IQAIFIDRDGTIGG--D---TT--IH---------YPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFV 67 (173)
T ss_pred CcEEEEeCCCcccC--C---CC--CC---------CHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHH
Confidence 45799999999942 1 00 00 0011245799999999998 67999999987642 122
Q ss_pred HHHHHhCCCCCeeeEEEE-----ecceeeecC---ceeecccccCCCCCcEEEEECCccccccccccccccccc
Q 015573 282 QLLNVLDPKRKLFRHRVF-----RESCVFVDG---NYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 282 ~VLd~LDP~~~lF~~rL~-----Rd~C~~~~g---~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f 347 (404)
..++.+. |...+. .+.+...+. .|.+-++.+|.++++||+|+|++.-.......|+...-.
T Consensus 68 ~~l~~~g-----~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 68 QELKGFG-----FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred HHHHhCC-----cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 2333333 222222 222223333 377888889999999999999997776666667765533
No 56
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.78 E-value=2.2e-05 Score=75.27 Aligned_cols=97 Identities=19% Similarity=0.288 Sum_probs=84.1
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|++|. +.+.++|.|++...++..+++.++..+ +|+.++..+++...+.+ |.+-+..+|.+++++|
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 556899999999997 779999999999999999999999875 89999888887655554 7888999999999999
Q ss_pred EEECCccccccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~~f 347 (404)
+|+|++.-...-..+|++....
T Consensus 186 ~vgDs~~Di~aA~~aGi~~i~v 207 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPVVGL 207 (248)
T ss_pred EEcCCHHHHHHHHHCCCEEEEE
Confidence 9999998887777888886644
No 57
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.72 E-value=1.1e-05 Score=73.92 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=63.3
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEec-ceee-----ecCc-eeecccccCCCCC
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRE-SCVF-----VDGN-YLKDLSVLGRDLS 322 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd-~C~~-----~~g~-yvKDLs~Lgrdls 322 (404)
+...||+.+||+.|.+.+.++|.|++...+++.+++.++... +|...+.-+ .... ..+. ...-+..++...+
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~ 145 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY 145 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence 456899999999999559999999999999999999988654 665543321 1100 0111 1111223344557
Q ss_pred cEEEEECCcccccccccccccc
Q 015573 323 HVIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 323 ~vIIVDDsp~s~~~qp~NgI~I 344 (404)
++|.|.|+..-.......|+.|
T Consensus 146 ~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 146 RVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred eEEEEeCCHHHHHHHHhCCCCE
Confidence 8999999998765555555555
No 58
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.67 E-value=7.5e-05 Score=66.89 Aligned_cols=86 Identities=15% Similarity=0.262 Sum_probs=60.6
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecC-----------------cee
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDG-----------------NYL 311 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g-----------------~yv 311 (404)
+.++||+.++|+.|. +.+.++|.|++...+++.+++.++... +|..++..+......| ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 568999999999998 579999999999999999999987654 7777665433221111 011
Q ss_pred e--cccccCCC-CCcEEEEECCcccccc
Q 015573 312 K--DLSVLGRD-LSHVIIVDNSPQAFGF 336 (404)
Q Consensus 312 K--DLs~Lgrd-ls~vIIVDDsp~s~~~ 336 (404)
| -+..+... ++++|+|+|+..-+..
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~a 177 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCP 177 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhch
Confidence 2 22223333 7889999999876643
No 59
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.67 E-value=0.00012 Score=74.98 Aligned_cols=120 Identities=14% Similarity=0.175 Sum_probs=83.2
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCC--------------
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTAS-------------- 275 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs-------------- 275 (404)
++.|+||-||||+...... +. ......+...||+.++|++|. +.|.++|.|+.
T Consensus 2 ~k~l~lDrDgtl~~~~~~~-----y~-------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~ 69 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTD-----FQ-------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFD 69 (354)
T ss_pred CcEEEEeCCCCccCCCCcc-----cc-------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHh
Confidence 6789999999999864211 10 112233567999999999998 67999999995
Q ss_pred -chHHHHHHHHHhCCCCCeeeEEEEe-----cceeeecCc---eeecccccCCCCCcEEEEECCccccccccccccccc
Q 015573 276 -QSIYAEQLLNVLDPKRKLFRHRVFR-----ESCVFVDGN---YLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 276 -~k~YA~~VLd~LDP~~~lF~~rL~R-----d~C~~~~g~---yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~ 345 (404)
...++..+++.++. .|...+++ +.|...+.. +..-+..++.+++++++|-|++.-+.....+|+...
T Consensus 70 ~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 70 PPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred hHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 24566667777664 36555554 455444432 334455678899999999999876766667777654
No 60
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.58 E-value=6.7e-05 Score=68.65 Aligned_cols=94 Identities=15% Similarity=0.180 Sum_probs=77.5
Q ss_pred EEecCcHHHHHHHhhc-cceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVSS-LFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~-~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|++|++ +|.++|.|++...++..+++.++... +|+.++..++....+.. |..-++.+|.+++++|
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDD-PFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChh-hhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 4567999999999995 69999999999999999999988654 89888888776654443 7788888999999999
Q ss_pred EEECCcccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I 344 (404)
+|+|++.-.......|+..
T Consensus 170 ~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EEeCCHHHHHHHHHCCCcE
Confidence 9999997665555666654
No 61
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.58 E-value=5.9e-05 Score=69.58 Aligned_cols=95 Identities=13% Similarity=0.099 Sum_probs=78.8
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeeccccc-CCCCCcEE
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVL-GRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~L-grdls~vI 325 (404)
+..+||+.++|++|.+.+.++|-|++...++..+++.++... +|+.++..+++...+.+ |.+-++.+ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 568999999999999669999999999999999999988765 89988888777655543 77888999 99999999
Q ss_pred EEECCc-cccccccccccccc
Q 015573 326 IVDNSP-QAFGFQVDNGIPIE 345 (404)
Q Consensus 326 IVDDsp-~s~~~qp~NgI~I~ 345 (404)
+|+|++ .-......+|++..
T Consensus 175 ~igD~~~~di~~A~~~G~~~i 195 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDTC 195 (224)
T ss_pred EECCCcHHHHHHHHHCCCcEE
Confidence 999997 45655556676543
No 62
>PLN02954 phosphoserine phosphatase
Probab=97.55 E-value=6.1e-05 Score=70.12 Aligned_cols=93 Identities=6% Similarity=0.154 Sum_probs=62.4
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCC-CeeeEEEEecc-------------eee-ecCc-eee
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKR-KLFRHRVFRES-------------CVF-VDGN-YLK 312 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~-~lF~~rL~Rd~-------------C~~-~~g~-yvK 312 (404)
..++||+.++|+.+. +.+.++|.|++...+++.+++.++... .+|...+.-+. |.. .+.. +.+
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 346899999999998 679999999999999999999987652 36654333211 100 0111 112
Q ss_pred cccccCCCCCcEEEEECCcccccccccccccc
Q 015573 313 DLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 313 DLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I 344 (404)
-+..+| .+++|+|-|++.-......+|+.+
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~~ 192 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGADL 192 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCCE
Confidence 222334 468999999998887654545553
No 63
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.50 E-value=8.5e-05 Score=67.66 Aligned_cols=109 Identities=18% Similarity=0.129 Sum_probs=76.4
Q ss_pred CCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCc-hHHHHHHHHHh
Q 015573 210 PPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQ-SIYAEQLLNVL 287 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~-k~YA~~VLd~L 287 (404)
.-+.||+|+||||..... ...-|++.++|++|. +.+.++|.|++. ...+..+++.+
T Consensus 24 ~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~ 81 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL 81 (170)
T ss_pred CCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc
Confidence 357899999999986411 023699999999998 569999999998 67788888877
Q ss_pred CCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCcc-ccccccccccccccc
Q 015573 288 DPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQ-AFGFQVDNGIPIESW 347 (404)
Q Consensus 288 DP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~-s~~~qp~NgI~I~~f 347 (404)
+... + + .........|..-++.+|.+++++++|+|+.. -......+|+...-+
T Consensus 82 gl~~-~-----~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 82 GIPV-L-----P-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred CCEE-E-----c-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence 6421 1 1 11111112366777888999999999999984 555555666654433
No 64
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.48 E-value=0.00011 Score=68.68 Aligned_cols=100 Identities=16% Similarity=0.094 Sum_probs=83.3
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecC---ceeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDG---NYLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g---~yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|+.|. +.+.++|.|++...+++.+++.++..+ +|+..+..+.....++ .|..-++.+|.++++|+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 456899999999998 779999999999999999999988765 8988887776554444 37788888999999999
Q ss_pred EEECCccccccccccccccccccCC
Q 015573 326 IVDNSPQAFGFQVDNGIPIESWFDD 350 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I~~f~gd 350 (404)
+|+|++.-...-...|++..-+.+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCC
Confidence 9999998887777888877555443
No 65
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.45 E-value=6.3e-05 Score=67.46 Aligned_cols=92 Identities=15% Similarity=0.199 Sum_probs=74.2
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vI 325 (404)
+...||+.++|+.|. ..+.++|.|++ .++..+++.++..+ +|+.++..+.+...+.. |.+-++.+|.+++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 567999999999998 56999999988 77999999988765 79888877766544443 6777888899999999
Q ss_pred EEECCcccccccccccccc
Q 015573 326 IVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 326 IVDDsp~s~~~qp~NgI~I 344 (404)
+|+|++........+|++.
T Consensus 164 ~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMFA 182 (185)
T ss_pred EEeCcHhhHHHHHHCCCeE
Confidence 9999988776666666653
No 66
>PRK09449 dUMP phosphatase; Provisional
Probab=97.45 E-value=0.00011 Score=68.34 Aligned_cols=94 Identities=17% Similarity=0.181 Sum_probs=77.0
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCC-CCCcEE
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGR-DLSHVI 325 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgr-dls~vI 325 (404)
+...||+.++|+.|.+.|.++|.|++...++..+++.++..+ +|+.++..+++...++. |.+-++.+|. ++++|+
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 457899999999999889999999999999999999988765 89998888887665554 7788899986 458999
Q ss_pred EEECCcc-cccccccccccc
Q 015573 326 IVDNSPQ-AFGFQVDNGIPI 344 (404)
Q Consensus 326 IVDDsp~-s~~~qp~NgI~I 344 (404)
+|+|++. -.......|+..
T Consensus 173 ~vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 173 MVGDNLHSDILGGINAGIDT 192 (224)
T ss_pred EEcCCcHHHHHHHHHCCCcE
Confidence 9999984 555555566543
No 67
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.42 E-value=0.00035 Score=67.77 Aligned_cols=129 Identities=12% Similarity=0.079 Sum_probs=75.5
Q ss_pred CCcEEEEeCCccccccccCCCC-CCCcc-----c--eeeec---cccceEEEEecCcHHHHHHHhh-ccceEEEEcCC--
Q 015573 210 PPTTLVLDLDETLVHSTLEPCD-DADFT-----F--PVNFN---LQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTAS-- 275 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~-~~d~~-----~--~v~~~---~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs-- 275 (404)
++..++||+|||+++++.-..- ...|. + ...|- ......+....||+.+||+++. +.++|++-|+.
T Consensus 62 ~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~ 141 (237)
T PRK11009 62 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTA 141 (237)
T ss_pred CCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4669999999999997531110 11110 0 00000 0011234445666999999995 88999999984
Q ss_pred --chHHHHHHHHHhCC-CCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCcccccccccccccc
Q 015573 276 --QSIYAEQLLNVLDP-KRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 276 --~k~YA~~VLd~LDP-~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I 344 (404)
...+++.+++.++. ...+|...+..+.. .+..-..-+.. ..-+|+|.|+..-+......||..
T Consensus 142 ~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~~----~~i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 142 TKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLKK----KNIRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred cccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHHh----cCCeEEEcCCHHHHHHHHHcCCcE
Confidence 46689999987775 23477655555432 11110111112 233899999987776555666654
No 68
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.40 E-value=0.0011 Score=66.01 Aligned_cols=124 Identities=16% Similarity=0.209 Sum_probs=82.4
Q ss_pred CCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhC
Q 015573 210 PPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLD 288 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LD 288 (404)
++-.+|||||.|||...... . ..-|.+-+.|.+|+ .++-+++||.|.+++|..-|+.++
T Consensus 121 ~phVIVfDlD~TLItd~~~v-------------------~-Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~ 180 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDV-------------------R-IRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELK 180 (297)
T ss_pred CCcEEEEECCCcccccCCcc-------------------c-cCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhC
Confidence 35689999999999864310 0 12478889999999 556999999999999999999999
Q ss_pred CCCCeeeEEEEecceeee----------------cCceeecccc-----------------cCCCC-CcEEEEECCcccc
Q 015573 289 PKRKLFRHRVFRESCVFV----------------DGNYLKDLSV-----------------LGRDL-SHVIIVDNSPQAF 334 (404)
Q Consensus 289 P~~~lF~~rL~Rd~C~~~----------------~g~yvKDLs~-----------------Lgrdl-s~vIIVDDsp~s~ 334 (404)
..+ +|+.++.+..-... ...+.-|+.. .|... +-+.+|||-+..
T Consensus 181 L~~-~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~N- 258 (297)
T PF05152_consen 181 LEG-YFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSN- 258 (297)
T ss_pred Ccc-ccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCccc-
Confidence 885 89888876442211 1112233322 24332 234567776643
Q ss_pred ccccccccccccccCCCCcHH
Q 015573 335 GFQVDNGIPIESWFDDRSDQE 355 (404)
Q Consensus 335 ~~qp~NgI~I~~f~gd~~D~e 355 (404)
-+.-+|-+.+...--..+|-.
T Consensus 259 n~~YD~FVnvkrcp~P~~DW~ 279 (297)
T PF05152_consen 259 NYSYDYFVNVKRCPVPVNDWQ 279 (297)
T ss_pred CccceeEEEeccCCCCchHHH
Confidence 356677777776655555543
No 69
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.37 E-value=0.00013 Score=65.36 Aligned_cols=112 Identities=16% Similarity=0.144 Sum_probs=76.1
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
+.++||+||||+.-...... + ....-++.++|+. -|++|. +++.|+|.|+.....+..+++.++..
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~----------~-~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTN----------N-GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEEECC----------C-CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 46899999999963110000 0 1111223457776 688888 68999999999999999999999865
Q ss_pred CCeeeEEEEecceeeecCc-eeecccccCCCCCcEEEEECCcccccccccccccc
Q 015573 291 RKLFRHRVFRESCVFVDGN-YLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 291 ~~lF~~rL~Rd~C~~~~g~-yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I 344 (404)
. +|.. ...+.. +.+-+..+|.++++|++|-|+..-...-...|+.+
T Consensus 69 ~-~~~~-------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 115 (154)
T TIGR01670 69 H-LYQG-------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSV 115 (154)
T ss_pred E-EEec-------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 4 5532 111222 44555677889999999999987776666666653
No 70
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.36 E-value=9.8e-05 Score=69.53 Aligned_cols=50 Identities=14% Similarity=0.276 Sum_probs=42.8
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEe
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFR 300 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~R 300 (404)
+.++||+.+||+.+.+.+.++|-|++...+++++++.++... +|..++--
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~~ 116 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEI 116 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeEE
Confidence 467999999999999778999999999999999999998764 66655443
No 71
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.35 E-value=0.00049 Score=73.82 Aligned_cols=108 Identities=16% Similarity=0.150 Sum_probs=73.8
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCch------------
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQS------------ 277 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k------------ 277 (404)
.+.+.||+||||+..... ..++. ....|. .+-||+.+.|+.|. ..|.|+|+|+...
T Consensus 168 ~Kia~fD~DGTLi~t~sg------~~~~~----~~~d~~-~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~ 236 (526)
T TIGR01663 168 EKIAGFDLDGTIIKTKSG------KVFPK----GPDDWQ-IIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFK 236 (526)
T ss_pred CcEEEEECCCCccccCCC------ccCCC----CHHHee-ecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHH
Confidence 689999999999975220 01110 111122 24699999999999 7899999999766
Q ss_pred HHHHHHHHHhCCCCCeeeEEEEecceeeecC---ceeeccccc----CCCCCcEEEEECCcc
Q 015573 278 IYAEQLLNVLDPKRKLFRHRVFRESCVFVDG---NYLKDLSVL----GRDLSHVIIVDNSPQ 332 (404)
Q Consensus 278 ~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g---~yvKDLs~L----grdls~vIIVDDsp~ 332 (404)
..+..+++.++.. |...+..+.|.+.+. .+..-+..+ +.+++++++|-|+..
T Consensus 237 ~ki~~iL~~lgip---fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaag 295 (526)
T TIGR01663 237 AKIEAIVAKLGVP---FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAG 295 (526)
T ss_pred HHHHHHHHHcCCc---eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCccc
Confidence 4688888888753 665555566655543 343333434 579999999999873
No 72
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.22 E-value=0.0002 Score=68.86 Aligned_cols=85 Identities=21% Similarity=0.292 Sum_probs=68.0
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecc---------eeeecCceeecccccCCC
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRES---------CVFVDGNYLKDLSVLGRD 320 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~---------C~~~~g~yvKDLs~Lgrd 320 (404)
++.-|-|++||-.|.+.+ .++||.+.+..|..+|..|+... .|..+++.+- |......|-+..+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 455667899999999777 89999999999999999999886 6888877543 222333477778888987
Q ss_pred -CCcEEEEECCcccccc
Q 015573 321 -LSHVIIVDNSPQAFGF 336 (404)
Q Consensus 321 -ls~vIIVDDsp~s~~~ 336 (404)
+.+|+++||+......
T Consensus 177 ~p~~t~FfDDS~~NI~~ 193 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQT 193 (244)
T ss_pred CcCceEEEcCchhhHHH
Confidence 9999999999886643
No 73
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.17 E-value=0.00085 Score=59.25 Aligned_cols=73 Identities=19% Similarity=0.180 Sum_probs=51.6
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHH---------
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAE--------- 281 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~--------- 281 (404)
+.+++||||||+.....+ +. .....+.+.+.|+++. +.++|+++|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~~-----y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~ 64 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGD-----YA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH 64 (126)
T ss_pred CEEEEeCCCCcccCCCCc-----cc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence 479999999997642100 00 1235788899999985 88999999999887766
Q ss_pred ---HHHHHhCCCCCeeeEEEEec
Q 015573 282 ---QLLNVLDPKRKLFRHRVFRE 301 (404)
Q Consensus 282 ---~VLd~LDP~~~lF~~rL~Rd 301 (404)
.+++.|+-++--++..+.|.
T Consensus 65 ~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 65 TLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred hHHHHHHHHHHcCCCCceEEeCC
Confidence 66777776664555666654
No 74
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.09 E-value=0.00032 Score=62.84 Aligned_cols=91 Identities=19% Similarity=0.184 Sum_probs=70.9
Q ss_pred EecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEEE
Q 015573 251 RCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVII 326 (404)
Q Consensus 251 ~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vII 326 (404)
...||+.++|++|. +.+.++|-|.+. .+..+++.++... +|+..+..++-...+.. |.+-++.+|.+++++|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~ 163 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIG 163 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 56899999999998 779999999764 3677889888764 78888776654433333 77888899999999999
Q ss_pred EECCcccccccccccccc
Q 015573 327 VDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 327 VDDsp~s~~~qp~NgI~I 344 (404)
|+|++.-+..-..+|+..
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 164 IEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred EecCHHHHHHHHHcCCEE
Confidence 999987776666666653
No 75
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=97.09 E-value=0.00019 Score=66.28 Aligned_cols=98 Identities=18% Similarity=0.100 Sum_probs=72.5
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHH--HHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCc
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIY--AEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSH 323 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~Y--A~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~ 323 (404)
+...||+.++|+.|. ++|.++|.|++...+ +...+..++.. .+|+.++..+++...+.. |..-++.+|.++++
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 557899999999998 679999999987554 33333333332 378887776665544443 77888999999999
Q ss_pred EEEEECCcccccccccccccccccc
Q 015573 324 VIIVDNSPQAFGFQVDNGIPIESWF 348 (404)
Q Consensus 324 vIIVDDsp~s~~~qp~NgI~I~~f~ 348 (404)
||+|||++.........|+...-+.
T Consensus 172 ~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 172 CVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 9999999988877777788765443
No 76
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.07 E-value=0.00099 Score=61.20 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=66.3
Q ss_pred cCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEEEEE
Q 015573 253 RPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVIIVD 328 (404)
Q Consensus 253 RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vIIVD 328 (404)
.|+..++|+.|. +.+.++|.|++...+++.+++.++... +|+..+..++... +.. |.+-++.+|.++++||+|+
T Consensus 108 ~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 108 LLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEe
Confidence 455699999998 679999999999999999999998764 8988888776554 443 6778888999999999999
Q ss_pred CCccc
Q 015573 329 NSPQA 333 (404)
Q Consensus 329 Dsp~s 333 (404)
|++.-
T Consensus 186 D~~~D 190 (197)
T TIGR01548 186 DTVDD 190 (197)
T ss_pred CCHHH
Confidence 99853
No 77
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=97.04 E-value=0.00058 Score=62.57 Aligned_cols=90 Identities=13% Similarity=0.099 Sum_probs=69.8
Q ss_pred EecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEEE
Q 015573 251 RCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVII 326 (404)
Q Consensus 251 ~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vII 326 (404)
..-||+.++|++|+ ..+.++|.|++... +..+++.++..+ +|+.++..+++...+.. |.+-++.+|.+++++|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 56799999999998 56999999998775 477888887654 78888887776655554 77888899999999999
Q ss_pred EECCc-ccccccccccc
Q 015573 327 VDNSP-QAFGFQVDNGI 342 (404)
Q Consensus 327 VDDsp-~s~~~qp~NgI 342 (404)
|+|++ .-.......|+
T Consensus 183 IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGW 199 (203)
T ss_pred ECCCchHHHHHHHHcCC
Confidence 99997 33433333443
No 78
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.03 E-value=0.00081 Score=62.19 Aligned_cols=84 Identities=17% Similarity=0.158 Sum_probs=74.8
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEEE
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVII 326 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vII 326 (404)
+..-|++.++|+.+...|.++|.|.+...++...+..++.. .+|+.+++.++....+.. |..-+..+|.+++++++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~-~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLL-DYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCCh-hhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 56789999999999977999999999999999999999855 489999999998876654 88889999999999999
Q ss_pred EECCcccc
Q 015573 327 VDNSPQAF 334 (404)
Q Consensus 327 VDDsp~s~ 334 (404)
|||+...-
T Consensus 177 VgD~~~~d 184 (229)
T COG1011 177 VGDSLEND 184 (229)
T ss_pred ECCChhhh
Confidence 99999776
No 79
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.03 E-value=0.00061 Score=67.20 Aligned_cols=126 Identities=12% Similarity=0.138 Sum_probs=86.6
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC--CCeeeEEEEecceeeecCc---eeecccccCCCCCc
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK--RKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSH 323 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~--~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~ 323 (404)
+...||+.++|++|. +++.++|.|++...++..+++.+.-. ..+|..+ ..+++...+.. |.+-+..+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 467999999999998 68999999999999999999876311 1233322 45555444433 67788899999999
Q ss_pred EEEEECCccccccccccccccccccCCC-CcHHHHhHHHHHhhccCCCCchHHHHhhhch
Q 015573 324 VIIVDNSPQAFGFQVDNGIPIESWFDDR-SDQELLLLLPFLESLVGVEDVRPLIVQKFNI 382 (404)
Q Consensus 324 vIIVDDsp~s~~~qp~NgI~I~~f~gd~-~D~eLl~LlpfLe~L~~~~DVR~vL~~~f~l 382 (404)
+|+|+|++..+..-..+|+.+.-..... ...+|. ..-.-++|++.+...++.|
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~------~ad~vi~~~~~l~~~~~~~ 275 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFS------GADAVFDCLGDVPLEDFDL 275 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCccccccC------CCcEEECChhhcchhhhHH
Confidence 9999999988877777887766553322 222221 1111246666666666554
No 80
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.01 E-value=0.00087 Score=67.64 Aligned_cols=95 Identities=11% Similarity=0.125 Sum_probs=66.5
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEec-c---------eeeecC--c-eeeccc
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRE-S---------CVFVDG--N-YLKDLS 315 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd-~---------C~~~~g--~-yvKDLs 315 (404)
+.++||+.++|+.|. ..+.++|.|++...+++.+++.++... ++...+--. . +...++ . +..-++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 567999999999999 679999999999999999999988653 343322111 1 111111 1 223345
Q ss_pred ccCCCCCcEEEEECCccccccccccccccc
Q 015573 316 VLGRDLSHVIIVDNSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 316 ~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~ 345 (404)
.+|.++++||.|-|+..-..+-..-|+.|.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 679999999999999977765555555553
No 81
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=96.98 E-value=0.00018 Score=69.25 Aligned_cols=100 Identities=18% Similarity=0.155 Sum_probs=76.7
Q ss_pred EEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhC-CCCCeeeEEEE--ecceeeecC---ceeecccccCCCC
Q 015573 249 YVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLD-PKRKLFRHRVF--RESCVFVDG---NYLKDLSVLGRDL 321 (404)
Q Consensus 249 ~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LD-P~~~lF~~rL~--Rd~C~~~~g---~yvKDLs~Lgrdl 321 (404)
.+..-||+..++..|. ..-.+.++|.+...+++..+..+. +- ..|++... -+.+...+. -|++.+++||..+
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~-~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~ 168 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIF-KNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPP 168 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHH-HhcCCCeecCCccccCCCCCchHHHHHHHhcCCCC
Confidence 4678999999999999 779999999999988888888765 33 35777666 333333222 2899999999998
Q ss_pred -CcEEEEECCccccccccccccccccccC
Q 015573 322 -SHVIIVDNSPQAFGFQVDNGIPIESWFD 349 (404)
Q Consensus 322 -s~vIIVDDsp~s~~~qp~NgI~I~~f~g 349 (404)
++|++++|+|........-|.++...-+
T Consensus 169 ~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 169 PSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred ccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 9999999999988766666666554433
No 82
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.97 E-value=0.0013 Score=62.84 Aligned_cols=95 Identities=11% Similarity=0.039 Sum_probs=67.3
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHH--HHHHHh
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAE--QLLNVL 287 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~--~VLd~L 287 (404)
-.+++||+||||.+... .-||+.++|++|. +.+.++|.|++.+..++ ..|+.+
T Consensus 8 ~~~~~~D~dG~l~~~~~------------------------~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 8 YDVFLLDLWGVIIDGNH------------------------TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred CCEEEEecccccccCCc------------------------cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence 35789999999976521 3799999999999 78999999999888776 678888
Q ss_pred CCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCc
Q 015573 288 DPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSP 331 (404)
Q Consensus 288 DP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp 331 (404)
+....+|+.++....... ..+..-++.+|..++++++|-|..
T Consensus 64 gl~~~~~~~Ii~s~~~~~--~~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 64 GINADLPEMIISSGEIAV--QMILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred CCCccccceEEccHHHHH--HHHHhhhhhccCCCceEEEeCCcc
Confidence 865326777777554321 111122244566667788887765
No 83
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.90 E-value=0.0014 Score=59.37 Aligned_cols=94 Identities=14% Similarity=0.236 Sum_probs=67.0
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc-------------eeeccc
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN-------------YLKDLS 315 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~-------------yvKDLs 315 (404)
+..+||+.++|+.|. +.+.++|.|++...+++.+++.++... +|...+..+......+. +.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 567999999999998 779999999999999999999998654 66655543322211111 112234
Q ss_pred ccCCCCCcEEEEECCcccccccccccccc
Q 015573 316 VLGRDLSHVIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 316 ~Lgrdls~vIIVDDsp~s~~~qp~NgI~I 344 (404)
.+|.+++++|+|.|+..-...-...|+++
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 56888999999999986654444455544
No 84
>PRK08238 hypothetical protein; Validated
Probab=96.88 E-value=0.0011 Score=70.52 Aligned_cols=78 Identities=15% Similarity=0.126 Sum_probs=54.7
Q ss_pred EecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc--eeecccccCCCCCcEEEE
Q 015573 251 RCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN--YLKDLSVLGRDLSHVIIV 327 (404)
Q Consensus 251 ~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~--yvKDLs~Lgrdls~vIIV 327 (404)
..+|++.++|+++. +++.++|-|++.+.+++++++.++. |+..+..+.....+|. ...-.+.++ .+.++.+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~yv 145 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDYA 145 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeEe
Confidence 46899999999998 8899999999999999999999863 7777766554333322 111112233 2457777
Q ss_pred ECCcccc
Q 015573 328 DNSPQAF 334 (404)
Q Consensus 328 DDsp~s~ 334 (404)
.|+..-.
T Consensus 146 GDS~~Dl 152 (479)
T PRK08238 146 GNSAADL 152 (479)
T ss_pred cCCHHHH
Confidence 7776433
No 85
>PLN02811 hydrolase
Probab=96.84 E-value=0.00067 Score=63.58 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=73.8
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHH-HHHHhCCCCCeeeEEEEec--ceeeecC---ceeecccccC---C
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQ-LLNVLDPKRKLFRHRVFRE--SCVFVDG---NYLKDLSVLG---R 319 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~-VLd~LDP~~~lF~~rL~Rd--~C~~~~g---~yvKDLs~Lg---r 319 (404)
+.+.||+.++|+.|+ ..+.++|-|++...++.. +++..... .+|+.+++.+ ++...+. .|.+-+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 346899999999998 679999999998765554 33333332 3788888888 6655444 3778888886 8
Q ss_pred CCCcEEEEECCccccccccccccccccc
Q 015573 320 DLSHVIIVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 320 dls~vIIVDDsp~s~~~qp~NgI~I~~f 347 (404)
++++||+|+|++..+......|++..-.
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence 8999999999998887777788877654
No 86
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.77 E-value=0.0016 Score=75.09 Aligned_cols=97 Identities=10% Similarity=0.146 Sum_probs=82.8
Q ss_pred ecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEEEE
Q 015573 252 CRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVIIV 327 (404)
Q Consensus 252 ~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vIIV 327 (404)
.-||+.++|++|. +.|.++|.|++...+++.+|+.++....+|+.++..+++...+.. |...++.+|.++++||+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 4799999999998 789999999999999999999988654579998888887765553 788899999999999999
Q ss_pred ECCcccccccccccccccccc
Q 015573 328 DNSPQAFGFQVDNGIPIESWF 348 (404)
Q Consensus 328 DDsp~s~~~qp~NgI~I~~f~ 348 (404)
+|++..+......|+...-..
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~ 262 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVT 262 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEEC
Confidence 999988877777787665443
No 87
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.69 E-value=0.0015 Score=62.11 Aligned_cols=84 Identities=13% Similarity=0.198 Sum_probs=63.2
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecC----ce---------e-ecc
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDG----NY---------L-KDL 314 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g----~y---------v-KDL 314 (404)
+.++||+.+.++.++ ..+.++|.|+|-..++++|.+.++.+. .+..++-.++ ....| .. + .=+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~d-G~ltG~v~g~~~~~~~K~~~l~~~~ 153 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDD-GKLTGRVVGPICDGEGKAKALRELA 153 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeC-CEEeceeeeeecCcchHHHHHHHHH
Confidence 778999999999999 779999999999999999999999875 5666666554 21122 11 1 112
Q ss_pred cccCCCCCcEEEEECCccccc
Q 015573 315 SVLGRDLSHVIIVDNSPQAFG 335 (404)
Q Consensus 315 s~Lgrdls~vIIVDDsp~s~~ 335 (404)
+.+|.++++++-+=|+..-..
T Consensus 154 ~~~g~~~~~~~a~gDs~nDlp 174 (212)
T COG0560 154 AELGIPLEETVAYGDSANDLP 174 (212)
T ss_pred HHcCCCHHHeEEEcCchhhHH
Confidence 345888889999988876543
No 88
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.63 E-value=0.0015 Score=62.61 Aligned_cols=92 Identities=11% Similarity=0.116 Sum_probs=69.9
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHh---CCCCCeeeEEEEecceeeecC---ceeecccccCCCCC
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVL---DPKRKLFRHRVFRESCVFVDG---NYLKDLSVLGRDLS 322 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~L---DP~~~lF~~rL~Rd~C~~~~g---~yvKDLs~Lgrdls 322 (404)
..+.||+.++|+++. +++.++|+|+++..+...+++.. +... +|+..+....+ .+. .|.+-+..+|.+++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~~~fd~~~g--~KP~p~~y~~i~~~lgv~p~ 170 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFSGYFDTTVG--LKTEAQSYVKIAGQLGSPPR 170 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcceEEEeCcc--cCCCHHHHHHHHHHhCcChh
Confidence 457899999999998 78999999999999998888875 3322 56544322212 222 37888999999999
Q ss_pred cEEEEECCcccccccccccccc
Q 015573 323 HVIIVDNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 323 ~vIIVDDsp~s~~~qp~NgI~I 344 (404)
++++|+|++.........|+..
T Consensus 171 e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 171 EILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred HEEEEeCCHHHHHHHHHcCCEE
Confidence 9999999998776666667664
No 89
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.62 E-value=0.0025 Score=58.74 Aligned_cols=113 Identities=14% Similarity=0.130 Sum_probs=72.8
Q ss_pred CcEEEEeCCcccccccc-CCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhC
Q 015573 211 PTTLVLDLDETLVHSTL-EPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLD 288 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~-~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LD 288 (404)
.+.+|+|+||||+.... ..... .....+.. |.+ .=++.+. +.++++|.|......+..+++.+.
T Consensus 21 ikli~~D~Dgtl~~~~i~~~~~~-----------~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lg 86 (183)
T PRK09484 21 IRLLICDVDGVFSDGLIYMGNNG-----------EELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLG 86 (183)
T ss_pred ceEEEEcCCeeeecCEEEEcCCC-----------CEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcC
Confidence 67899999999998631 00000 11111111 221 1334444 789999999999999999999988
Q ss_pred CCCCeeeEEEEecceeeecC-ceeecccccCCCCCcEEEEECCccccccccccccccc
Q 015573 289 PKRKLFRHRVFRESCVFVDG-NYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 289 P~~~lF~~rL~Rd~C~~~~g-~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~ 345 (404)
... +|. +...+. .+.+-+..+|.++++|++|-|++.-...-...|+.+.
T Consensus 87 l~~-~f~-------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~ 136 (183)
T PRK09484 87 ITH-LYQ-------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA 136 (183)
T ss_pred Cce-eec-------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence 653 443 111111 2445567789999999999999877765555666653
No 90
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.60 E-value=0.0021 Score=63.37 Aligned_cols=92 Identities=16% Similarity=0.183 Sum_probs=55.2
Q ss_pred CCcEEEEeCCccccccccC----CCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHH---
Q 015573 210 PPTTLVLDLDETLVHSTLE----PCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAE--- 281 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~----~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~--- 281 (404)
+++.+|||+|||+++.+.- ......|. +..+..-........-||+.+||+++. +...|+|.|.....+.+
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~-~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~ 152 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFD-PETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATL 152 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCC-HHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHH
Confidence 3679999999999987621 00111110 000000000112345799999999997 77999999998766555
Q ss_pred HHHHHhCCCCCeeeEEEEecc
Q 015573 282 QLLNVLDPKRKLFRHRVFRES 302 (404)
Q Consensus 282 ~VLd~LDP~~~lF~~rL~Rd~ 302 (404)
..|..++.....+++.+.|+.
T Consensus 153 ~~Lkk~Gi~~~~~d~lllr~~ 173 (266)
T TIGR01533 153 KNLKRFGFPQADEEHLLLKKD 173 (266)
T ss_pred HHHHHcCcCCCCcceEEeCCC
Confidence 455555544323466777753
No 91
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=96.47 E-value=0.00066 Score=60.66 Aligned_cols=76 Identities=13% Similarity=0.115 Sum_probs=64.6
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEEE
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVII 326 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vII 326 (404)
+...||+.++|+. ++|.|++...++..+++.++... +|+.+++.+.....++. |.+-++.+|.++++||+
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 4579999999993 78999999999999999988764 88888887776655554 78889999999999999
Q ss_pred EECCcc
Q 015573 327 VDNSPQ 332 (404)
Q Consensus 327 VDDsp~ 332 (404)
|+|++.
T Consensus 162 vgD~~~ 167 (175)
T TIGR01493 162 VAAHQW 167 (175)
T ss_pred EecChh
Confidence 999964
No 92
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=96.17 E-value=0.012 Score=55.28 Aligned_cols=95 Identities=11% Similarity=0.089 Sum_probs=66.3
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC-CCeeeEE--EEecceeeecC-------------ceee
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK-RKLFRHR--VFRESCVFVDG-------------NYLK 312 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~-~~lF~~r--L~Rd~C~~~~g-------------~yvK 312 (404)
+.++||+.+||+++. +.+.++|.|++...|++++++.+ .. ..++... +..+.....+. ...+
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~ 151 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS 151 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence 568999999999998 77999999999999999999987 32 2243221 22222111111 1234
Q ss_pred cccccCCCCCcEEEEECCccccccccccccccc
Q 015573 313 DLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIE 345 (404)
Q Consensus 313 DLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~ 345 (404)
-++.++.+..+||+|.|+..-...-...|+.+.
T Consensus 152 ~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 152 LIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 555667788899999999988766666677443
No 93
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=96.03 E-value=0.016 Score=55.55 Aligned_cols=58 Identities=24% Similarity=0.252 Sum_probs=50.7
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
.+.|++||||||+.+.. ...|...+.|+.+. +.+.++|.|......+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 3 IKLLAFDLDGTLLDSNK-----------------------TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred eeEEEEcCCCCccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 57899999999998743 14888899999886 9999999999999999999999987
Q ss_pred CC
Q 015573 290 KR 291 (404)
Q Consensus 290 ~~ 291 (404)
..
T Consensus 60 ~~ 61 (264)
T COG0561 60 DG 61 (264)
T ss_pred Cc
Confidence 75
No 94
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=95.94 E-value=0.013 Score=54.82 Aligned_cols=112 Identities=16% Similarity=0.206 Sum_probs=76.2
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCc------------h
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQ------------S 277 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~------------k 277 (404)
.++|+||.||||+--.. ++.. .... ....||+.+-|..+. ..|.+||+|..+ .
T Consensus 5 ~k~lflDRDGtin~d~~------~yv~------~~~~--~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKG------DYVD------SLDD--FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCC------cccC------cHHH--hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 57899999999975311 0110 0001 235899999999997 779999999832 2
Q ss_pred HHHHHHHHHhCCCCCeeeEEEEecc-----eeeecC---ceeecccccCCCCCcEEEEECCcccccc
Q 015573 278 IYAEQLLNVLDPKRKLFRHRVFRES-----CVFVDG---NYLKDLSVLGRDLSHVIIVDNSPQAFGF 336 (404)
Q Consensus 278 ~YA~~VLd~LDP~~~lF~~rL~Rd~-----C~~~~g---~yvKDLs~Lgrdls~vIIVDDsp~s~~~ 336 (404)
.+-..+++.|--.+--|+.++++.| |.+.+. .+..-+...+.|+++.++|=|+..-..+
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~ 137 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQA 137 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHH
Confidence 2333355566555556889999644 665543 4667777788999999999999654433
No 95
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.92 E-value=0.013 Score=54.32 Aligned_cols=96 Identities=18% Similarity=0.304 Sum_probs=71.9
Q ss_pred CCCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHH
Q 015573 208 SCPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 208 ~~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~ 286 (404)
..+.+++|+|||+|||- | ...+ .-|-+.+.+..+. ..-.++|.|..++.-+..++..
T Consensus 25 ~~Gikgvi~DlDNTLv~--w---d~~~-----------------~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 25 AHGIKGVILDLDNTLVP--W---DNPD-----------------ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred HcCCcEEEEeccCceec--c---cCCC-----------------CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence 34578999999999985 2 1111 2678889999999 6699999999999999999999
Q ss_pred hCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCcc
Q 015573 287 LDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQ 332 (404)
Q Consensus 287 LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~ 332 (404)
||..- +++-- ......+.+.|..++.++++||+|-|.-.
T Consensus 83 l~v~f------i~~A~-KP~~~~fr~Al~~m~l~~~~vvmVGDqL~ 121 (175)
T COG2179 83 LGVPF------IYRAK-KPFGRAFRRALKEMNLPPEEVVMVGDQLF 121 (175)
T ss_pred cCCce------eeccc-CccHHHHHHHHHHcCCChhHEEEEcchhh
Confidence 98642 12211 11112367889999999999999999763
No 96
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.92 E-value=0.017 Score=55.98 Aligned_cols=58 Identities=21% Similarity=0.129 Sum_probs=47.5
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
.+.+++||||||+.+.. ...|...+.|+.|. +.+.++|.|.-....+..+++.++.
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 56899999999997521 12567889999999 6799999999999999999999875
Q ss_pred CC
Q 015573 290 KR 291 (404)
Q Consensus 290 ~~ 291 (404)
..
T Consensus 61 ~~ 62 (273)
T PRK00192 61 ED 62 (273)
T ss_pred CC
Confidence 43
No 97
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.83 E-value=0.015 Score=53.39 Aligned_cols=54 Identities=24% Similarity=0.272 Sum_probs=45.0
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
|++||||||+++... .-|...+.|+.+. ++..++|.|.-....+..++..+.-.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 689999999996431 2567788898888 89999999999999999999977643
No 98
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.74 E-value=0.02 Score=48.12 Aligned_cols=48 Identities=19% Similarity=0.211 Sum_probs=34.8
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHH
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLN 285 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd 285 (404)
++|||||||.+... .=||+.+||++|. .+..+++.|.++..-...+++
T Consensus 1 ~l~D~dGvl~~g~~------------------------~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~ 49 (101)
T PF13344_consen 1 FLFDLDGVLYNGNE------------------------PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAK 49 (101)
T ss_dssp EEEESTTTSEETTE------------------------E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHH
T ss_pred CEEeCccEeEeCCC------------------------cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHH
Confidence 58999999987421 3699999999999 669999999987443333333
No 99
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=95.72 E-value=0.025 Score=52.62 Aligned_cols=57 Identities=12% Similarity=0.186 Sum_probs=46.7
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
+.+++||||||+.... ..-|...+-|+++. +.+.++|.|.-....+..+++.|+..
T Consensus 2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 4789999999996421 13677788899998 67999999999999999999999876
Q ss_pred C
Q 015573 291 R 291 (404)
Q Consensus 291 ~ 291 (404)
.
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 100
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.72 E-value=0.025 Score=54.79 Aligned_cols=58 Identities=21% Similarity=0.230 Sum_probs=45.7
Q ss_pred CCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhC
Q 015573 210 PPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLD 288 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LD 288 (404)
+++.+++||||||+++... .-|-..+-|+++. ++..++|.|.-....+.++++.|+
T Consensus 6 ~~~lI~~DlDGTLL~~~~~-----------------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~ 62 (271)
T PRK03669 6 DPLLIFTDLDGTLLDSHTY-----------------------DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLG 62 (271)
T ss_pred CCeEEEEeCccCCcCCCCc-----------------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhC
Confidence 4688999999999985220 1234567788887 779999999999999999999987
Q ss_pred CC
Q 015573 289 PK 290 (404)
Q Consensus 289 P~ 290 (404)
..
T Consensus 63 ~~ 64 (271)
T PRK03669 63 LQ 64 (271)
T ss_pred CC
Confidence 54
No 101
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.52 E-value=0.017 Score=53.20 Aligned_cols=117 Identities=13% Similarity=0.101 Sum_probs=75.2
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
-+.+|||.||+|-.-+.- +.-.+.+ ..-+..|-+.- +..|. +.+.++|.|+....++..+++.++.
T Consensus 7 i~~~v~d~dGv~tdg~~~----------~~~~g~~-~~~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi 73 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIV----------INDEGIE-SRNFDIKDGMG--VIVLQLCGIDVAIITSKKSGAVRHRAEELKI 73 (169)
T ss_pred CeEEEEeCceeeECCeEE----------EcCCCcE-EEEEecchHHH--HHHHHHCCCEEEEEECCCcHHHHHHHHHCCC
Confidence 578999999999775320 0000111 11122355443 23343 7799999999999999999999987
Q ss_pred CCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEECCccccccccccccccccc
Q 015573 290 KRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 290 ~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f 347 (404)
.. +|... ......+..-+..+|.++++|+.|.|++.-...-...|+.+..-
T Consensus 74 ~~-~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~ 124 (169)
T TIGR02726 74 KR-FHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG 124 (169)
T ss_pred cE-EEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc
Confidence 63 55421 00011245566678999999999999987765555556555443
No 102
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=95.50 E-value=0.04 Score=51.36 Aligned_cols=58 Identities=12% Similarity=0.185 Sum_probs=46.3
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
.+.+++||||||+.+.. ...|...+-|+++. ++..++|.|.-....+.++++.++.
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGT 59 (230)
T ss_pred eeEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 36789999999997522 13567778888888 6789999999999889999888876
Q ss_pred CC
Q 015573 290 KR 291 (404)
Q Consensus 290 ~~ 291 (404)
..
T Consensus 60 ~~ 61 (230)
T PRK01158 60 SG 61 (230)
T ss_pred CC
Confidence 54
No 103
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=95.48 E-value=0.0084 Score=57.10 Aligned_cols=89 Identities=9% Similarity=0.106 Sum_probs=66.6
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEEE
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVII 326 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vII 326 (404)
+..-||+.++|+.|++.|.++|.|++... ++.++.. .+|+.++..+.....+.. |.+-++.+|.+++++|+
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 34459999999999988999999998765 3555554 378888776665544443 77888889999999999
Q ss_pred EECCc-ccccccccccccc
Q 015573 327 VDNSP-QAFGFQVDNGIPI 344 (404)
Q Consensus 327 VDDsp-~s~~~qp~NgI~I 344 (404)
|.|++ .-......+|+..
T Consensus 186 VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EcCCcHHHHHHHHHCCCeE
Confidence 99985 5554455666664
No 104
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.47 E-value=0.042 Score=52.41 Aligned_cols=58 Identities=22% Similarity=0.298 Sum_probs=45.0
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
.+.+++||||||+.+.. ..-|...+-|+++. ++..++|.|.-....+..+++.|+.
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-----------------------TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 46899999999997632 12455667788887 6799999999888888888888876
Q ss_pred CC
Q 015573 290 KR 291 (404)
Q Consensus 290 ~~ 291 (404)
..
T Consensus 60 ~~ 61 (272)
T PRK10530 60 DT 61 (272)
T ss_pred CC
Confidence 53
No 105
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.36 E-value=0.022 Score=51.84 Aligned_cols=106 Identities=19% Similarity=0.201 Sum_probs=56.1
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCc---h----------
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQ---S---------- 277 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~---k---------- 277 (404)
|.+.||||||||....... ++. ...-+..+-|++.+-|+++. +.|.|||+|... .
T Consensus 1 Kia~fD~DgTLi~~~s~~~------f~~-----~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~ 69 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK------FPK-----DPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF 69 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT------S-S-----STCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred CEEEEeCCCCccCCCCCCc------CcC-----CHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence 4689999999998753111 000 00112335789999999999 789999999641 1
Q ss_pred -HHHHHHHHHhCCCCCeeeEEEE-ecceeeec---Cceeeccccc----CCCCCcEEEEECCcc
Q 015573 278 -IYAEQLLNVLDPKRKLFRHRVF-RESCVFVD---GNYLKDLSVL----GRDLSHVIIVDNSPQ 332 (404)
Q Consensus 278 -~YA~~VLd~LDP~~~lF~~rL~-Rd~C~~~~---g~yvKDLs~L----grdls~vIIVDDsp~ 332 (404)
...+.+++.|+-. + ..++ ..+..+.+ |++..-++.+ ..|+++.++|=|...
T Consensus 70 ~~ki~~il~~l~ip---~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaag 129 (159)
T PF08645_consen 70 HEKIENILKELGIP---I-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAG 129 (159)
T ss_dssp HHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCH
T ss_pred HHHHHHHHHHcCCc---e-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCC
Confidence 2344455556422 2 2222 22222222 3333333333 358999999999754
No 106
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=95.35 E-value=0.034 Score=53.27 Aligned_cols=57 Identities=16% Similarity=0.208 Sum_probs=45.8
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
.+.+++||||||+++.. .+-|...+.|+++. +++.++|.|.-....+.++++.++.
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 46889999999998632 12455678888888 7799999999999999999998875
Q ss_pred C
Q 015573 290 K 290 (404)
Q Consensus 290 ~ 290 (404)
.
T Consensus 60 ~ 60 (270)
T PRK10513 60 E 60 (270)
T ss_pred C
Confidence 4
No 107
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=95.23 E-value=0.043 Score=52.34 Aligned_cols=54 Identities=20% Similarity=0.321 Sum_probs=43.8
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
+++||||||++... ..-|...+.|+++. +++.++|.|......+..+++.++..
T Consensus 2 i~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 2 IFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred EEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 78999999997521 13566778888888 77999999999998888888888765
No 108
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=95.20 E-value=0.045 Score=52.77 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=43.6
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
+.+++||||||+.+.. .+-|...+-|+++. ++..++|.|.-....+.++++.++..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 5789999999997532 12455667788887 67888888888888888888888765
Q ss_pred C
Q 015573 291 R 291 (404)
Q Consensus 291 ~ 291 (404)
.
T Consensus 60 ~ 60 (272)
T PRK15126 60 A 60 (272)
T ss_pred C
Confidence 3
No 109
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=95.12 E-value=0.053 Score=51.65 Aligned_cols=53 Identities=21% Similarity=0.210 Sum_probs=43.0
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
+++||||||++... .-|...++|+++. ++..+++.|.-+...+..+++.++..
T Consensus 2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 68999999998421 1356789999998 67999999999888888888888753
No 110
>PRK10976 putative hydrolase; Provisional
Probab=95.12 E-value=0.048 Score=52.24 Aligned_cols=57 Identities=23% Similarity=0.321 Sum_probs=43.4
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
+.+++||||||+++.. ..-|...+-|+++. ++..++|.|.-....+.++++.++..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 3 QVVASDLDGTLLSPDH-----------------------TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred eEEEEeCCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 6789999999997632 12455667777777 67899999988888888888887754
Q ss_pred C
Q 015573 291 R 291 (404)
Q Consensus 291 ~ 291 (404)
.
T Consensus 60 ~ 60 (266)
T PRK10976 60 S 60 (266)
T ss_pred C
Confidence 3
No 111
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=95.07 E-value=0.048 Score=50.78 Aligned_cols=54 Identities=24% Similarity=0.229 Sum_probs=43.3
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
+++||||||+++... .-|-..+.|+.+. ++..++|.|......+.++++.++..
T Consensus 2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999976310 1222678899988 67999999999999999999998754
No 112
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=95.04 E-value=0.055 Score=50.62 Aligned_cols=94 Identities=10% Similarity=0.100 Sum_probs=62.0
Q ss_pred EEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEE--ecceeeecCc-------------eee
Q 015573 249 YVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVF--RESCVFVDGN-------------YLK 312 (404)
Q Consensus 249 ~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~--Rd~C~~~~g~-------------yvK 312 (404)
.+.+|||+.+||+.+. ..+.++|.|++...|++++++.+.+...++..++. .+........ -.+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 3678999999999999 57999999999999999999998654434432222 1111111110 012
Q ss_pred cccccCCCCCcEEEEECCcccccccccccc
Q 015573 313 DLSVLGRDLSHVIIVDNSPQAFGFQVDNGI 342 (404)
Q Consensus 313 DLs~Lgrdls~vIIVDDsp~s~~~qp~NgI 342 (404)
-++.++...+++|.|-|+..-+..-...++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 333445567889999999877754444444
No 113
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=95.03 E-value=0.043 Score=54.62 Aligned_cols=104 Identities=18% Similarity=0.324 Sum_probs=67.8
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC---CCCeeeEEEEecceeeecCc-------eee------
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP---KRKLFRHRVFRESCVFVDGN-------YLK------ 312 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP---~~~lF~~rL~Rd~C~~~~g~-------yvK------ 312 (404)
+.+|||+.+||+.|. ....++|+|+|...+++.+|..++. ...+++.++--+......|. +.|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~ 199 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL 199 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence 567999999999997 6799999999999999999998653 22355555443221222221 222
Q ss_pred -cccccC--CCCCcEEEEECCcccccc-----ccccccccccccCCCCcH
Q 015573 313 -DLSVLG--RDLSHVIIVDNSPQAFGF-----QVDNGIPIESWFDDRSDQ 354 (404)
Q Consensus 313 -DLs~Lg--rdls~vIIVDDsp~s~~~-----qp~NgI~I~~f~gd~~D~ 354 (404)
..+.++ .++++||+|.|+..-..+ +.+|.|.| .|-.+.-+.
T Consensus 200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e~ 248 (277)
T TIGR01544 200 RNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE 248 (277)
T ss_pred HHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHHH
Confidence 222345 688999999999876532 23454444 444444344
No 114
>PTZ00445 p36-lilke protein; Provisional
Probab=94.98 E-value=0.02 Score=55.05 Aligned_cols=131 Identities=17% Similarity=0.203 Sum_probs=77.5
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHH--------
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIY-------- 279 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~Y-------- 279 (404)
.+-+.|++|||.|||..-...+.+.+- ....+.-..+|.+.++++.|. ..+.|+|-|-|.+..
T Consensus 41 ~GIk~Va~D~DnTlI~~HsgG~~~~~~--------~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~ 112 (219)
T PTZ00445 41 CGIKVIASDFDLTMITKHSGGYIDPDN--------DDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPR 112 (219)
T ss_pred cCCeEEEecchhhhhhhhcccccCCCc--------chhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcc
Confidence 457899999999998732111211110 001122346999999999998 689999999888743
Q ss_pred -------HHHHHHHhC----CCCCeee--EEEEecceee-----ecC---c--e--eecccccCCCCCcEEEEECCcccc
Q 015573 280 -------AEQLLNVLD----PKRKLFR--HRVFRESCVF-----VDG---N--Y--LKDLSVLGRDLSHVIIVDNSPQAF 334 (404)
Q Consensus 280 -------A~~VLd~LD----P~~~lF~--~rL~Rd~C~~-----~~g---~--y--vKDLs~Lgrdls~vIIVDDsp~s~ 334 (404)
+...|+.=. ..+ ++. -+++.+.-.+ .+. . | .+-++..|.+++.+++|||.+...
T Consensus 113 ~Isg~~li~~~lk~s~~~~~i~~-~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NV 191 (219)
T PTZ00445 113 YISGDRMVEAALKKSKCDFKIKK-VYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNC 191 (219)
T ss_pred eechHHHHHHHHHhcCccceeee-eeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHH
Confidence 444444211 111 110 1112222111 111 1 3 445567799999999999999888
Q ss_pred cccccccccccccc
Q 015573 335 GFQVDNGIPIESWF 348 (404)
Q Consensus 335 ~~qp~NgI~I~~f~ 348 (404)
...-.-|+...-+.
T Consensus 192 eaA~~lGi~ai~f~ 205 (219)
T PTZ00445 192 KNALKEGYIALHVT 205 (219)
T ss_pred HHHHHCCCEEEEcC
Confidence 66656666655554
No 115
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.86 E-value=0.055 Score=49.02 Aligned_cols=62 Identities=18% Similarity=0.314 Sum_probs=42.2
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHH---HHHHHh
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAE---QLLNVL 287 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~---~VLd~L 287 (404)
+++|+||||+.+... .. ..+ ..... ...|++.++++.+. +.|.+++.|+.....+. ..++.+
T Consensus 2 VisDIDGTL~~sd~~--~~---~~~----~~~~~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 2 VISDIDGTITKSDVL--GH---VVP----IIGKD---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred EEEecCCCCcccccc--cc---ccc----ccccC---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 789999999987421 00 000 00001 24799999999999 77999999998877664 566553
No 116
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=94.76 E-value=0.068 Score=49.52 Aligned_cols=53 Identities=13% Similarity=0.246 Sum_probs=41.8
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
+++||||||+++.. .+.|-..+-|+++. ++..+++.|.-....+..+++.++.
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 58999999998632 13455667788887 6789999999888888888888874
No 117
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=94.35 E-value=0.11 Score=46.18 Aligned_cols=82 Identities=20% Similarity=0.317 Sum_probs=56.1
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecC--------------ceeec-
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDG--------------NYLKD- 313 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g--------------~yvKD- 313 (404)
+..+||+.++|+.+. ..+.++|.|++...|++++++.++... +|...+.-+......| ..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 457999999999998 779999999999999999999987653 6665544321111111 11111
Q ss_pred ccccCCCCCcEEEEECCcc
Q 015573 314 LSVLGRDLSHVIIVDNSPQ 332 (404)
Q Consensus 314 Ls~Lgrdls~vIIVDDsp~ 332 (404)
+..+|.++++++.|-|+..
T Consensus 151 ~~~~~~~~~~~~~iGDs~~ 169 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVN 169 (177)
T ss_pred HHHhCCCHHHEEEEeCCHH
Confidence 2233556777888887764
No 118
>PRK10444 UMP phosphatase; Provisional
Probab=94.19 E-value=0.082 Score=51.35 Aligned_cols=52 Identities=23% Similarity=0.425 Sum_probs=41.1
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHh
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVL 287 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~L 287 (404)
++++|||||||++... .=||+.++|+.|. +...+++.|.....-...+++.|
T Consensus 2 ~~v~~DlDGtL~~~~~------------------------~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 2 KNVICDIDGVLMHDNV------------------------AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred cEEEEeCCCceEeCCe------------------------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 4789999999988621 2689999999999 67999999988776666666655
No 119
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.08 E-value=0.064 Score=57.08 Aligned_cols=126 Identities=14% Similarity=0.194 Sum_probs=72.6
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHh
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVL 287 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~L 287 (404)
..+++||||||+||.--..-...-.... ......+..+ --+++|...+. +++=++|.|-....-|..+..+
T Consensus 220 ~~kK~LVLDLDNTLWGGVIGedGv~GI~--Ls~~~~G~~f-----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~k- 291 (574)
T COG3882 220 KSKKALVLDLDNTLWGGVIGEDGVDGIR--LSNSAEGEAF-----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRK- 291 (574)
T ss_pred cccceEEEecCCccccccccccccccee--ecCCCCchhH-----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHhh-
Confidence 3489999999999954432100000000 0000000001 12567777787 8889999999988888887665
Q ss_pred CCCCCeeeEEEEecc-----eeee-c-CceeecccccCCCCCcEEEEECCccccccccccc-cccccc
Q 015573 288 DPKRKLFRHRVFRES-----CVFV-D-GNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNG-IPIESW 347 (404)
Q Consensus 288 DP~~~lF~~rL~Rd~-----C~~~-~-g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp~Ng-I~I~~f 347 (404)
.|+ .+|--++ |... + .+..|-.++||..++-.|+|||+|.....-..++ |.|.+|
T Consensus 292 hp~-----MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~ 354 (574)
T COG3882 292 HPD-----MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEF 354 (574)
T ss_pred CCC-----eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccC
Confidence 222 1222222 2221 1 1345777788999999999999998774433333 444444
No 120
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=94.06 E-value=0.12 Score=49.56 Aligned_cols=54 Identities=26% Similarity=0.188 Sum_probs=43.1
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
+++||||||++.... .-+...++|+.+. +.+.+++.|.-....+..+++.++..
T Consensus 2 i~~DlDGTll~~~~~-----------------------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 2 IFTDLDGTLLDPHGY-----------------------DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred EEEcCCCCCcCCCCc-----------------------CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999986320 1234788999998 56999999999999999999988743
No 121
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=93.89 E-value=0.11 Score=47.63 Aligned_cols=53 Identities=26% Similarity=0.359 Sum_probs=42.6
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhC
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLD 288 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LD 288 (404)
|++||||||+.... ....|.+.+.|++|. +...++|.|......+..+++.++
T Consensus 2 i~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 2 LFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 78999999997421 013578889999999 458999999999999999998753
No 122
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.72 E-value=0.14 Score=49.91 Aligned_cols=54 Identities=20% Similarity=0.420 Sum_probs=44.6
Q ss_pred EEecCcHHHHHHHhh---ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEeccee
Q 015573 250 VRCRPYLKDFLERVS---SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCV 304 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls---~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~ 304 (404)
+..-||..+|++.++ ..++++|-|-+...|.+.+|+.-+... +|+.++.-..+.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~TNpa~~ 126 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFTNPACF 126 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEeCCcee
Confidence 667999999999994 489999999999999999999988764 676655544443
No 123
>PTZ00174 phosphomannomutase; Provisional
Probab=93.71 E-value=0.12 Score=49.61 Aligned_cols=52 Identities=25% Similarity=0.279 Sum_probs=38.2
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHH
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLN 285 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd 285 (404)
.+.+++||||||+++.. .+-|...+-|+.+. ++..++|.|.-...-+...+.
T Consensus 5 ~klia~DlDGTLL~~~~-----------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-----------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcCCCC-----------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 57899999999998742 12556677888888 679999999876654544444
No 124
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=93.68 E-value=0.11 Score=52.05 Aligned_cols=53 Identities=21% Similarity=0.239 Sum_probs=41.2
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhc-----cceEEEEcCCc----hHHHHH
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSS-----LFEIIIFTASQ----SIYAEQ 282 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~-----~yEIvIfTAs~----k~YA~~ 282 (404)
+.++|||||||+++.. .-|++.++|+.|.. ...++++|... +.+++.
T Consensus 1 ~~~ifD~DGvL~~g~~------------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGKK------------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCcc------------------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 3689999999998742 26899999999995 78899999664 566777
Q ss_pred HHHHhC
Q 015573 283 LLNVLD 288 (404)
Q Consensus 283 VLd~LD 288 (404)
+.+.++
T Consensus 57 l~~~lG 62 (321)
T TIGR01456 57 ISSLLG 62 (321)
T ss_pred HHHHcC
Confidence 656554
No 125
>PLN02645 phosphoglycolate phosphatase
Probab=93.41 E-value=0.13 Score=51.36 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=39.5
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHH
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~ 286 (404)
-++++||+||||++... .=||+.++|+.|. +...+++.|.........+++.
T Consensus 28 ~~~~~~D~DGtl~~~~~------------------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~ 80 (311)
T PLN02645 28 VETFIFDCDGVIWKGDK------------------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKK 80 (311)
T ss_pred CCEEEEeCcCCeEeCCc------------------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHH
Confidence 46899999999987421 1399999999998 7899999999775444444433
No 126
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=93.26 E-value=0.25 Score=49.87 Aligned_cols=57 Identities=12% Similarity=0.189 Sum_probs=43.7
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
+.+++||||||++... | .-+-+.+-|++|. +...|++.|+-+..-+..+++.|...
T Consensus 2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 5788899999998532 1 1233677788888 77999999998888888888888764
Q ss_pred C
Q 015573 291 R 291 (404)
Q Consensus 291 ~ 291 (404)
.
T Consensus 59 ~ 59 (302)
T PRK12702 59 H 59 (302)
T ss_pred C
Confidence 3
No 127
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=93.11 E-value=0.29 Score=54.32 Aligned_cols=59 Identities=20% Similarity=0.139 Sum_probs=45.3
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHh
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVL 287 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~L 287 (404)
+.++.+++||||||++... ++ =+...+-|+.+. ++..++|.|.-....+..+++.|
T Consensus 414 ~~~KLIfsDLDGTLLd~d~---------------------~i--~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~L 470 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPLT---------------------YS--YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNEL 470 (694)
T ss_pred ceeeEEEEECcCCCcCCCC---------------------cc--CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc
Confidence 4578899999999998632 01 123456788887 67999999999999999999988
Q ss_pred CCC
Q 015573 288 DPK 290 (404)
Q Consensus 288 DP~ 290 (404)
+..
T Consensus 471 gl~ 473 (694)
T PRK14502 471 GIK 473 (694)
T ss_pred CCC
Confidence 754
No 128
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=92.93 E-value=0.14 Score=46.70 Aligned_cols=84 Identities=18% Similarity=0.156 Sum_probs=57.9
Q ss_pred EecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc--------------eeeccc
Q 015573 251 RCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN--------------YLKDLS 315 (404)
Q Consensus 251 ~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~--------------yvKDLs 315 (404)
..+|++.++|+.+. +.+.++|.|++...+++++++.++... +|..++.........|. ...-+.
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 46999999999998 679999999999999999999998765 66654432111111110 111123
Q ss_pred ccCCCCCcEEEEECCccccc
Q 015573 316 VLGRDLSHVIIVDNSPQAFG 335 (404)
Q Consensus 316 ~Lgrdls~vIIVDDsp~s~~ 335 (404)
..+.++++++.+-|++.-..
T Consensus 166 ~~~~~~~~~~~~gDs~~D~~ 185 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDLP 185 (202)
T ss_pred HcCCCHHHcEeeeCCcccHH
Confidence 34667788888888876553
No 129
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=92.65 E-value=0.19 Score=48.72 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=35.1
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchH
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSI 278 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~ 278 (404)
++++|||||||++..... . ..=|+..++|+.|. +...+++.|.....
T Consensus 2 k~i~~D~DGtl~~~~~~~------------------~--~~~~~a~~al~~l~~~G~~~~~~Tn~~~~ 49 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS------------------G--VAVPGSQEAVKRLRGASVKVRFVTNTTKE 49 (257)
T ss_pred CEEEEeCCCeEEeCCCcc------------------c--CcCCCHHHHHHHHHHCCCeEEEEECCCCC
Confidence 478999999998763200 0 02689999999999 67999999975544
No 130
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=92.65 E-value=0.2 Score=48.91 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=33.2
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCc
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQ 276 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~ 276 (404)
+.++|||||||++... .-||+.++|++|. ++..+++.|+++
T Consensus 3 ~~~~~D~DGtl~~~~~------------------------~~~ga~e~l~~L~~~g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLGER------------------------VVPGAPELLDRLARAGKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 4789999999977521 2588999999999 678999999854
No 131
>PLN02887 hydrolase family protein
Probab=92.62 E-value=0.44 Score=52.08 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=45.6
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
.+.+++||||||+++.. .+-|...+-|+++. ++..++|.|.-...-+..+++.++.
T Consensus 308 iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 308 FSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred ccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCc
Confidence 57899999999998632 12455667788888 7899999999998888889988875
Q ss_pred C
Q 015573 290 K 290 (404)
Q Consensus 290 ~ 290 (404)
.
T Consensus 365 ~ 365 (580)
T PLN02887 365 A 365 (580)
T ss_pred c
Confidence 3
No 132
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=92.24 E-value=0.32 Score=47.58 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=42.1
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhc--cceEEEEcCCchHHHHHHHHHhC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSS--LFEIIIFTASQSIYAEQLLNVLD 288 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~--~yEIvIfTAs~k~YA~~VLd~LD 288 (404)
+..|+||+||||+.....+... ..-|.+.+-|+.|.+ ...++|.|.-...-+..++..++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~------------------~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~ 75 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQV------------------VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR 75 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccc------------------cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence 5789999999999854322110 124777888888874 57888888888877777765443
No 133
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=91.95 E-value=0.29 Score=47.27 Aligned_cols=54 Identities=17% Similarity=0.252 Sum_probs=37.7
Q ss_pred cEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCc---hHHHHHHHHHh
Q 015573 212 TTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQ---SIYAEQLLNVL 287 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~---k~YA~~VLd~L 287 (404)
+.++|||||||++... .=|+..++|++|. +...+++.|.++ ..-+...++.+
T Consensus 2 ~~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CEEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 4789999999987521 2478899999998 778899998532 33334445555
Q ss_pred CC
Q 015573 288 DP 289 (404)
Q Consensus 288 DP 289 (404)
+.
T Consensus 58 g~ 59 (249)
T TIGR01457 58 DI 59 (249)
T ss_pred CC
Confidence 53
No 134
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=91.84 E-value=0.22 Score=48.68 Aligned_cols=100 Identities=15% Similarity=0.174 Sum_probs=64.2
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEE-----------Eec----ceeeecCc----
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRV-----------FRE----SCVFVDGN---- 309 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL-----------~Rd----~C~~~~g~---- 309 (404)
...-|.+.++++.++ ++.-|+..|+....+...-++.|---+--|+... +.. .-.+.+|-
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 446899999999999 8899999999999888887776532111122111 111 11112221
Q ss_pred -------eeecccccCCCCCcEEEEECCccccc----cccccccccccccC
Q 015573 310 -------YLKDLSVLGRDLSHVIIVDNSPQAFG----FQVDNGIPIESWFD 349 (404)
Q Consensus 310 -------yvKDLs~Lgrdls~vIIVDDsp~s~~----~qp~NgI~I~~f~g 349 (404)
...=|..+|..++++|+|||+..... .-...+|..-.|..
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 22335567999999999999987651 12237777766653
No 135
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.83 E-value=0.21 Score=46.31 Aligned_cols=93 Identities=22% Similarity=0.311 Sum_probs=60.6
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccc-e--EEEEcCCc-------hH
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLF-E--IIIFTASQ-------SI 278 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~y-E--IvIfTAs~-------k~ 278 (404)
.+-+.||||+|+||+.-.. -..-|-+.+.+++|.+.| . |+|.|.+. ..
T Consensus 39 ~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~ 96 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGE 96 (168)
T ss_pred cCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHH
Confidence 4578999999999975321 013677888999999554 3 99999883 66
Q ss_pred HHHHHHHHhCCCCCeeeEEEEecceeeecCceeecccccC-----CCCCcEEEEECCc
Q 015573 279 YAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLG-----RDLSHVIIVDNSP 331 (404)
Q Consensus 279 YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lg-----rdls~vIIVDDsp 331 (404)
-|+.+-+.|+.. +|.|.--.. +.+-+-++.++ ..++++++|-|..
T Consensus 97 ~a~~~~~~lgIp--vl~h~~kKP------~~~~~i~~~~~~~~~~~~p~eiavIGDrl 146 (168)
T PF09419_consen 97 RAEALEKALGIP--VLRHRAKKP------GCFREILKYFKCQKVVTSPSEIAVIGDRL 146 (168)
T ss_pred HHHHHHHhhCCc--EEEeCCCCC------ccHHHHHHHHhhccCCCCchhEEEEcchH
Confidence 788888888743 343332222 22222223332 3588999999865
No 136
>PLN02423 phosphomannomutase
Probab=91.04 E-value=0.39 Score=46.34 Aligned_cols=53 Identities=15% Similarity=0.278 Sum_probs=35.7
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
+..+++||||||+++.. .+-|...+.|++|.+...++|.|..... .+.+.+.+
T Consensus 7 ~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR~~~---~~~~~~~~ 59 (245)
T PLN02423 7 GVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGSDLS---KISEQLGK 59 (245)
T ss_pred ceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCcCHH---HHHHHhcc
Confidence 44566999999997632 1246667889999977888888876332 44444443
No 137
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=90.11 E-value=0.5 Score=45.16 Aligned_cols=60 Identities=25% Similarity=0.128 Sum_probs=40.9
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhcc-ceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSL-FEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~-yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
+..|+.||||||+++... + ....|.+.+.++.+.+. -.+++.|.-+..-+..+++.+.+
T Consensus 1 ~~li~tDlDGTLl~~~~~-----~---------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDG-----D---------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCCCC-----C---------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 357888999999974210 0 01368888888888844 47777777777777777776654
Q ss_pred C
Q 015573 290 K 290 (404)
Q Consensus 290 ~ 290 (404)
.
T Consensus 61 ~ 61 (249)
T TIGR01485 61 L 61 (249)
T ss_pred C
Confidence 3
No 138
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=90.09 E-value=0.45 Score=47.25 Aligned_cols=51 Identities=20% Similarity=0.220 Sum_probs=38.9
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHH
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLN 285 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd 285 (404)
..+++|||||||++... .=||+.+||++|. +.-.+++-|.+...-.+.+..
T Consensus 8 y~~~l~DlDGvl~~G~~------------------------~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~ 59 (269)
T COG0647 8 YDGFLFDLDGVLYRGNE------------------------AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAA 59 (269)
T ss_pred cCEEEEcCcCceEeCCc------------------------cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Confidence 45789999999987642 3699999999999 568888889887554443333
No 139
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=89.70 E-value=0.13 Score=50.04 Aligned_cols=58 Identities=22% Similarity=0.439 Sum_probs=44.0
Q ss_pred EEecCcHHHHHHHhh--ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecC
Q 015573 250 VRCRPYLKDFLERVS--SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDG 308 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls--~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g 308 (404)
+..-||+-+.++.++ ..||++|-|-+..-+.+.+|++.+... +|+.+++-..|.-..|
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d-~F~~IfTNPa~~da~G 142 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD-LFSEIFTNPACVDASG 142 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH-HHHHHhcCCcccCCCC
Confidence 556899999999998 348999999999999999999987643 5655554444444333
No 140
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=89.51 E-value=0.5 Score=45.19 Aligned_cols=51 Identities=24% Similarity=0.322 Sum_probs=38.0
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCC----chHHHHHHHHHhC
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTAS----QSIYAEQLLNVLD 288 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs----~k~YA~~VLd~LD 288 (404)
++||+||||+++.. .=|++.++|..+. +.+.+++-|.+ ...+++.+.+.++
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g 56 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLG 56 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 48999999988632 1468999999998 56889988844 3567777766443
No 141
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=89.27 E-value=0.4 Score=46.61 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=51.0
Q ss_pred CCcEEEEeCCccccccccC----CCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHH
Q 015573 210 PPTTLVLDLDETLVHSTLE----PCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLL 284 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~----~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VL 284 (404)
++..+|||+|||++....- ......|. ...+..-...---..-|++.+|++.+. .+++|++.|.-........+
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~-~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTD-PTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCC-HHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 5789999999999987520 00000010 000000000001235799999999997 78999999998876644444
Q ss_pred HHh---CCCCCeeeEEEEec
Q 015573 285 NVL---DPKRKLFRHRVFRE 301 (404)
Q Consensus 285 d~L---DP~~~lF~~rL~Rd 301 (404)
+.| +-.+ +++.+.|.
T Consensus 155 ~nL~~~G~~~--~~~LiLR~ 172 (229)
T TIGR01675 155 DNLINAGFTG--WKHLILRG 172 (229)
T ss_pred HHHHHcCCCC--cCeeeecC
Confidence 443 3222 24555564
No 142
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=88.77 E-value=0.67 Score=42.38 Aligned_cols=28 Identities=21% Similarity=0.564 Sum_probs=24.8
Q ss_pred EEecCcHHHHHHHhhccceEEEEcCCch
Q 015573 250 VRCRPYLKDFLERVSSLFEIIIFTASQS 277 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~yEIvIfTAs~k 277 (404)
...-||+++-+++|-++|+|+|.||++.
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamd 94 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMD 94 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccC
Confidence 4458999999999999999999999943
No 143
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=86.43 E-value=0.31 Score=44.62 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.8
Q ss_pred EEEEeCCccccccc
Q 015573 213 TLVLDLDETLVHST 226 (404)
Q Consensus 213 tLVLDLDeTLVhS~ 226 (404)
.|||||||||++|.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 58999999999986
No 144
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=86.42 E-value=0.71 Score=41.75 Aligned_cols=80 Identities=18% Similarity=0.141 Sum_probs=59.1
Q ss_pred EEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecce-eeecCceeecccccCCCCCcEEE
Q 015573 249 YVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESC-VFVDGNYLKDLSVLGRDLSHVII 326 (404)
Q Consensus 249 ~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C-~~~~g~yvKDLs~Lgrdls~vII 326 (404)
....||++.++|++|. ..+.++|.|......|..+.+.++... ..++.+.+ ......+.+-++.|+.+++.|++
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 3457999999999999 559999999999999999999998633 33333321 11111245666677888889999
Q ss_pred EECCcc
Q 015573 327 VDNSPQ 332 (404)
Q Consensus 327 VDDsp~ 332 (404)
|-|...
T Consensus 201 vGDg~n 206 (215)
T PF00702_consen 201 VGDGVN 206 (215)
T ss_dssp EESSGG
T ss_pred EccCHH
Confidence 999763
No 145
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=86.23 E-value=0.87 Score=49.34 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=58.5
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEE
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVD 328 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVD 328 (404)
...||++.++|++|. ..++++|.|...+.+|+.+++.++.+ +|. +.....+...++.+ ..+.++|++|-
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~-----~~~p~~K~~~v~~l---~~~~~~v~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRA-----EVLPDDKAALIKEL---QEKGRVVAMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEc-----cCChHHHHHHHHHH---HHcCCEEEEEe
Confidence 457999999999998 67999999999999999999999864 332 11111122233333 33567899999
Q ss_pred CCcccccccccccccc
Q 015573 329 NSPQAFGFQVDNGIPI 344 (404)
Q Consensus 329 Dsp~s~~~qp~NgI~I 344 (404)
|...-...-...++.|
T Consensus 474 Dg~nD~~al~~A~vgi 489 (562)
T TIGR01511 474 DGINDAPALAQADVGI 489 (562)
T ss_pred CCCccHHHHhhCCEEE
Confidence 9876664433344444
No 146
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=84.72 E-value=2.5 Score=40.37 Aligned_cols=41 Identities=17% Similarity=0.333 Sum_probs=37.2
Q ss_pred EEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCC
Q 015573 250 VRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPK 290 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~ 290 (404)
++++||.++|.+++. +...++|-|+++..|..++++.|--+
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgk 113 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGK 113 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccc
Confidence 778999999999999 66999999999999999999987643
No 147
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=84.55 E-value=0.55 Score=45.91 Aligned_cols=79 Identities=13% Similarity=0.072 Sum_probs=63.1
Q ss_pred ecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCc---eeecccccCCCCCcEEEE
Q 015573 252 CRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGN---YLKDLSVLGRDLSHVIIV 327 (404)
Q Consensus 252 ~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~---yvKDLs~Lgrdls~vIIV 327 (404)
..|-+ ++|+.+. +.+.|.|.|....++= .++..++.. .+|++.+..-.-...+.. |.+.|..+|..|+.||.|
T Consensus 115 ~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhI 191 (237)
T KOG3085|consen 115 LDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHI 191 (237)
T ss_pred ccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEe
Confidence 44444 9999999 7789999999988765 777777776 589887764444444544 889999999999999999
Q ss_pred ECCccc
Q 015573 328 DNSPQA 333 (404)
Q Consensus 328 DDsp~s 333 (404)
||....
T Consensus 192 gD~l~n 197 (237)
T KOG3085|consen 192 GDLLEN 197 (237)
T ss_pred cCcccc
Confidence 999987
No 148
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=84.41 E-value=0.55 Score=46.27 Aligned_cols=69 Identities=23% Similarity=0.307 Sum_probs=36.4
Q ss_pred CCcEEEEeCCccccccccCC----CCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEE-cCCchHH
Q 015573 210 PPTTLVLDLDETLVHSTLEP----CDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIF-TASQSIY 279 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~----~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIf-TAs~k~Y 279 (404)
+++.+|+|||||.++-+.-. .....|+ |..++--...---+.=||+.|||+++-++--.|.| |.-....
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~-pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFT-PETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQEN 151 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCC-ccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhc
Confidence 46699999999999865211 0111110 00000000000123469999999999966544444 4434433
No 149
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=83.86 E-value=0.53 Score=41.98 Aligned_cols=16 Identities=19% Similarity=0.530 Sum_probs=13.9
Q ss_pred cEEEEeCCcccccccc
Q 015573 212 TTLVLDLDETLVHSTL 227 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~ 227 (404)
++++|||||||+++..
T Consensus 2 ~~iiFD~DGTL~ds~~ 17 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAP 17 (185)
T ss_pred CeEEEcCCCcccCChH
Confidence 5799999999999863
No 150
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=83.83 E-value=1.3 Score=45.43 Aligned_cols=52 Identities=23% Similarity=0.314 Sum_probs=44.2
Q ss_pred EEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHh-C------CCCCeeeEEEE
Q 015573 248 VYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVL-D------PKRKLFRHRVF 299 (404)
Q Consensus 248 ~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~L-D------P~~~lF~~rL~ 299 (404)
-||.+-||+.++|+.|. ....+.|-|++...|++.+|+.+ + ....+|+.++.
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 56788999999999998 67999999999999999999997 5 23567876554
No 151
>PLN03017 trehalose-phosphatase
Probab=83.77 E-value=1.5 Score=45.41 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=42.3
Q ss_pred CCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHH
Q 015573 210 PPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLN 285 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd 285 (404)
++..|+||+||||+--...+. ....-|.+.+-|++|.+.+.++|-|.-...-+..++.
T Consensus 110 k~~llflD~DGTL~Piv~~p~------------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 110 KQIVMFLDYDGTLSPIVDDPD------------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred CCeEEEEecCCcCcCCcCCcc------------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence 467888999999983221110 0123578888999999999999999888887777744
No 152
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=83.31 E-value=0.61 Score=44.71 Aligned_cols=16 Identities=31% Similarity=0.486 Sum_probs=14.3
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
-+.++|||||||++|.
T Consensus 22 ~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 22 LEAVLFDVDGTLCDSD 37 (248)
T ss_pred cCEEEEcCCCccCcCH
Confidence 4689999999999986
No 153
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=82.93 E-value=0.64 Score=42.45 Aligned_cols=15 Identities=20% Similarity=0.200 Sum_probs=13.1
Q ss_pred cEEEEeCCccccccc
Q 015573 212 TTLVLDLDETLVHST 226 (404)
Q Consensus 212 ktLVLDLDeTLVhS~ 226 (404)
+.|+|||||||+++.
T Consensus 1 k~viFDlDGTL~d~~ 15 (203)
T TIGR02252 1 KLITFDAVGTLLALK 15 (203)
T ss_pred CeEEEecCCceeeeC
Confidence 468999999999974
No 154
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=82.28 E-value=0.21 Score=48.14 Aligned_cols=75 Identities=16% Similarity=0.269 Sum_probs=42.6
Q ss_pred CCcEEEEeCCccccccccC----CCCCCCccceeeec---cccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchH---
Q 015573 210 PPTTLVLDLDETLVHSTLE----PCDDADFTFPVNFN---LQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSI--- 278 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~----~~~~~d~~~~v~~~---~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~--- 278 (404)
++..+|||+||||+..... ......|. +..+. ..... ..=||+.+|++++. .+++|++-|.-...
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~-~~~w~~wv~~~~~---~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~ 146 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFS-PEDWDEWVASGKA---PAIPGALELYNYARSRGVKVFFITGRPESQRE 146 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH--CCHHHHHHHCTGG---EEETTHHHHHHHHHHTTEEEEEEEEEETTCHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCC-hHHHHHHHhcccC---cccHHHHHHHHHHHHCCCeEEEEecCCchhHH
Confidence 4788999999999865321 00000000 00000 00111 34699999999999 77999999875544
Q ss_pred HHHHHHHHhC
Q 015573 279 YAEQLLNVLD 288 (404)
Q Consensus 279 YA~~VLd~LD 288 (404)
....-|...+
T Consensus 147 ~T~~nL~~~G 156 (229)
T PF03767_consen 147 ATEKNLKKAG 156 (229)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 3333344444
No 155
>PRK11590 hypothetical protein; Provisional
Probab=81.96 E-value=0.78 Score=42.92 Aligned_cols=39 Identities=21% Similarity=0.157 Sum_probs=34.8
Q ss_pred EEecCcHHHHH-HHhh-ccceEEEEcCCchHHHHHHHHHhC
Q 015573 250 VRCRPYLKDFL-ERVS-SLFEIIIFTASQSIYAEQLLNVLD 288 (404)
Q Consensus 250 V~~RPgl~eFL-~~Ls-~~yEIvIfTAs~k~YA~~VLd~LD 288 (404)
+..+||+.+.| +.+. +++.++|-|++...|+++++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5677 689999999999999999999877
No 156
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=81.44 E-value=2 Score=42.64 Aligned_cols=59 Identities=22% Similarity=0.202 Sum_probs=44.7
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccce--EEEEcCCchHHHHHHHH
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFE--IIIFTASQSIYAEQLLN 285 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yE--IvIfTAs~k~YA~~VLd 285 (404)
.++.+++||.||||++....|.. +..=+++.+.|..|+..+. ++|.|.-+..-.+..+.
T Consensus 16 a~~~~~~lDyDGTl~~i~~~p~~------------------a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 16 ARKRLLFLDYDGTLTEIVPHPEA------------------AVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred ccceEEEEeccccccccccCccc------------------cCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 45788999999999987543221 2236788899999998888 77888888877777766
No 157
>PLN02151 trehalose-phosphatase
Probab=81.36 E-value=2.3 Score=43.91 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=43.8
Q ss_pred CCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHH
Q 015573 210 PPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLN 285 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd 285 (404)
++..|+||+||||+--...| -.+..-|.+.+-|+.|++.+.++|-|.-...-++.++.
T Consensus 97 ~~~ll~lDyDGTL~PIv~~P------------------~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 97 KQIVMFLDYDGTLSPIVDDP------------------DRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CceEEEEecCccCCCCCCCc------------------ccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 46789999999998432211 11234788999999999889999999888877777664
No 158
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=81.06 E-value=0.76 Score=43.73 Aligned_cols=16 Identities=38% Similarity=0.586 Sum_probs=13.8
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
-+.|+|||||||+++.
T Consensus 10 ~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 10 ISALTFDLDDTLYDNR 25 (238)
T ss_pred ceeEEEcCcccccCCh
Confidence 3689999999999974
No 159
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=80.78 E-value=0.9 Score=44.84 Aligned_cols=17 Identities=35% Similarity=0.587 Sum_probs=15.0
Q ss_pred CCcEEEEeCCccccccc
Q 015573 210 PPTTLVLDLDETLVHST 226 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~ 226 (404)
+-+++||||||||++|.
T Consensus 39 ~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 39 LPEALLFDCDGVLVETE 55 (286)
T ss_pred CCcEEEEeCceeEEccc
Confidence 35689999999999997
No 160
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=79.64 E-value=0.78 Score=40.92 Aligned_cols=15 Identities=20% Similarity=0.503 Sum_probs=12.9
Q ss_pred EEEEeCCcccccccc
Q 015573 213 TLVLDLDETLVHSTL 227 (404)
Q Consensus 213 tLVLDLDeTLVhS~~ 227 (404)
.+|||+||||+++..
T Consensus 1 ~iiFD~DGTL~ds~~ 15 (185)
T TIGR01990 1 AVIFDLDGVITDTAE 15 (185)
T ss_pred CeEEcCCCccccChH
Confidence 379999999999863
No 161
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=79.55 E-value=1.3 Score=42.46 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=32.1
Q ss_pred CCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceE--EEEcCC
Q 015573 210 PPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEI--IIFTAS 275 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEI--vIfTAs 275 (404)
++..|+||+||||+.....|. .+..=|++.+.|+.|.+.... +|-|.-
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~------------------~~~~~~~~~~~L~~L~~~~~~~v~ivSGR 51 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPD------------------AAVVSDRLLTILQKLAARPHNAIWIISGR 51 (244)
T ss_pred CcEEEEEecCccccCCcCCCc------------------ccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 467899999999986422111 112358899999999976544 455554
No 162
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=79.00 E-value=1 Score=41.39 Aligned_cols=16 Identities=38% Similarity=0.625 Sum_probs=13.8
Q ss_pred cEEEEeCCcccccccc
Q 015573 212 TTLVLDLDETLVHSTL 227 (404)
Q Consensus 212 ktLVLDLDeTLVhS~~ 227 (404)
+.++||+||||+++..
T Consensus 2 k~viFD~DGTL~d~~~ 17 (224)
T TIGR02254 2 KTLLFDLDDTILDFQA 17 (224)
T ss_pred CEEEEcCcCcccccch
Confidence 5799999999999753
No 163
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=78.71 E-value=2.6 Score=45.44 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=60.1
Q ss_pred EEecCcHHHHHHHhh-cc-ceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEE
Q 015573 250 VRCRPYLKDFLERVS-SL-FEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIV 327 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~-yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIV 327 (404)
...|||+.+.|++|. ++ ++++|-|.....+|..+++.++... +|... . ...+...++. ++....+|++|
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~-~----p~~K~~~v~~---l~~~~~~v~~v 453 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAEL-L----PEDKLAIVKE---LQEEGGVVAMV 453 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccC-C----HHHHHHHHHH---HHHcCCEEEEE
Confidence 457999999999998 67 9999999999999999999999754 55321 1 1112223333 34455699999
Q ss_pred ECCcccccccccccccc
Q 015573 328 DNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 328 DDsp~s~~~qp~NgI~I 344 (404)
-|...-...-...++-|
T Consensus 454 GDg~nD~~al~~A~vgi 470 (556)
T TIGR01525 454 GDGINDAPALAAADVGI 470 (556)
T ss_pred ECChhHHHHHhhCCEeE
Confidence 99987664333334433
No 164
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=78.42 E-value=1.1 Score=40.87 Aligned_cols=15 Identities=33% Similarity=0.417 Sum_probs=13.3
Q ss_pred cEEEEeCCccccccc
Q 015573 212 TTLVLDLDETLVHST 226 (404)
Q Consensus 212 ktLVLDLDeTLVhS~ 226 (404)
+.++|||||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 479999999999975
No 165
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=78.27 E-value=3.3 Score=46.21 Aligned_cols=62 Identities=24% Similarity=0.301 Sum_probs=44.9
Q ss_pred CCCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhc--cceEEEEcCCchHHHHHHHH
Q 015573 208 SCPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSS--LFEIIIFTASQSIYAEQLLN 285 (404)
Q Consensus 208 ~~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~--~yEIvIfTAs~k~YA~~VLd 285 (404)
..++..++||+||||+.....+. ....-|.+.+.|+.|.+ ...|+|.|.-.....+.++.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPE------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred hccceEEEEecCccccCCCCCcc------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhC
Confidence 34578999999999996422110 01135788899999996 78999999998887777765
Q ss_pred Hh
Q 015573 286 VL 287 (404)
Q Consensus 286 ~L 287 (404)
.+
T Consensus 551 ~~ 552 (726)
T PRK14501 551 DL 552 (726)
T ss_pred CC
Confidence 44
No 166
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=78.03 E-value=1.3 Score=40.03 Aligned_cols=16 Identities=31% Similarity=0.459 Sum_probs=13.5
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
.+++||||||||+.+.
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 4589999999999853
No 167
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=77.55 E-value=1.3 Score=40.84 Aligned_cols=15 Identities=20% Similarity=0.459 Sum_probs=13.3
Q ss_pred cEEEEeCCccccccc
Q 015573 212 TTLVLDLDETLVHST 226 (404)
Q Consensus 212 ktLVLDLDeTLVhS~ 226 (404)
+++||||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 579999999999974
No 168
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=77.49 E-value=1.1 Score=39.79 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=11.9
Q ss_pred EEEeCCccccccc
Q 015573 214 LVLDLDETLVHST 226 (404)
Q Consensus 214 LVLDLDeTLVhS~ 226 (404)
|+|||||||+++.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7999999999985
No 169
>PRK09449 dUMP phosphatase; Provisional
Probab=76.63 E-value=1.3 Score=41.17 Aligned_cols=15 Identities=40% Similarity=0.481 Sum_probs=12.8
Q ss_pred CcEEEEeCCcccccc
Q 015573 211 PTTLVLDLDETLVHS 225 (404)
Q Consensus 211 kktLVLDLDeTLVhS 225 (404)
-++++|||||||++.
T Consensus 3 ~k~iiFDlDGTLid~ 17 (224)
T PRK09449 3 YDWILFDADETLFHF 17 (224)
T ss_pred ccEEEEcCCCchhcc
Confidence 368999999999974
No 170
>PLN02580 trehalose-phosphatase
Probab=76.56 E-value=4.2 Score=42.45 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=45.5
Q ss_pred CCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHH
Q 015573 210 PPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~ 286 (404)
++..|+||.||||+--...| --+..=|++.+-|+.|++.+.++|-|.-...-++.++..
T Consensus 118 k~~~LfLDyDGTLaPIv~~P------------------d~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 118 KKIALFLDYDGTLSPIVDDP------------------DRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred CCeEEEEecCCccCCCCCCc------------------ccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 46788999999997543211 122346899999999999899999999888888777753
No 171
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=76.52 E-value=2.7 Score=39.69 Aligned_cols=52 Identities=19% Similarity=0.172 Sum_probs=34.0
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccceEEEEcCCchHHHHHHHHHhCC
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
+++||||||+++... +.| +.+-++...+...++|-|.-...-+..++..++.
T Consensus 2 i~~DlDgTLl~~~~~-----------------------~~~-~~~~~~~~~~gi~~viaTGR~~~~v~~~~~~l~l 53 (236)
T TIGR02471 2 IITDLDNTLLGDDEG-----------------------LAS-FVELLRGSGDAVGFGIATGRSVESAKSRYAKLNL 53 (236)
T ss_pred eEEeccccccCCHHH-----------------------HHH-HHHHHHhcCCCceEEEEeCCCHHHHHHHHHhCCC
Confidence 688999999985320 112 1244553336677788888887777777777764
No 172
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=76.26 E-value=1.4 Score=41.06 Aligned_cols=16 Identities=25% Similarity=0.424 Sum_probs=14.3
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
.+.++||+||||+++.
T Consensus 7 ~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 7 ILAAIFDMDGLLIDSE 22 (222)
T ss_pred CcEEEEcCCCCCCcCH
Confidence 5789999999999984
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=75.78 E-value=3.6 Score=41.16 Aligned_cols=91 Identities=10% Similarity=0.089 Sum_probs=48.7
Q ss_pred CcEEEEeCCccccccccC----CCCCCCccceeeec-cccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHH
Q 015573 211 PTTLVLDLDETLVHSTLE----PCDDADFTFPVNFN-LQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLL 284 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~----~~~~~d~~~~v~~~-~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VL 284 (404)
+-.+|||+|||++....- ......|. +..+. .-...--...=|++.+|++++. .+++|++.|.-....-+.=+
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~-~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFD-SELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCC-hhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 578999999999964320 00000010 00010 0000001223689999999998 78999999988765444444
Q ss_pred HHhCCCCC-eeeEEEEecc
Q 015573 285 NVLDPKRK-LFRHRVFRES 302 (404)
Q Consensus 285 d~LDP~~~-lF~~rL~Rd~ 302 (404)
+.|.-.+- -.++.+.|+.
T Consensus 180 ~NL~kaGy~~~~~LiLR~~ 198 (275)
T TIGR01680 180 ANLKKAGYHTWEKLILKDP 198 (275)
T ss_pred HHHHHcCCCCcceeeecCC
Confidence 44433331 0244555643
No 174
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=75.70 E-value=1.5 Score=40.39 Aligned_cols=82 Identities=24% Similarity=0.389 Sum_probs=42.7
Q ss_pred EEecCcHHHHHHHhhcc-ceEEEEcCCchH-H---HH---HHHHHhCCCCCeeeEEEEecceeeecCceeecccccCCCC
Q 015573 250 VRCRPYLKDFLERVSSL-FEIIIFTASQSI-Y---AE---QLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDL 321 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls~~-yEIvIfTAs~k~-Y---A~---~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdl 321 (404)
...-||+.|.|+.|.+. +++++-|+.... + +. .-|+..-|. ..+...++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~---------K~--~v~~D- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD---------KT--LVGGD- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS---------GG--GC--S-
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC---------CC--eEecc-
Confidence 45679999999999955 578777776543 1 22 223332111 01122223211 22 24444
Q ss_pred CcEEEEECCccccccccccccccccc
Q 015573 322 SHVIIVDNSPQAFGFQVDNGIPIESW 347 (404)
Q Consensus 322 s~vIIVDDsp~s~~~qp~NgI~I~~f 347 (404)
|+|||+|.....-...|+++.=|
T Consensus 139 ---vlIDD~~~n~~~~~~~g~~~iLf 161 (191)
T PF06941_consen 139 ---VLIDDRPHNLEQFANAGIPVILF 161 (191)
T ss_dssp ---EEEESSSHHHSS-SSESSEEEEE
T ss_pred ---EEecCChHHHHhccCCCceEEEE
Confidence 89999998887666677555433
No 175
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=74.63 E-value=4.2 Score=39.33 Aligned_cols=55 Identities=25% Similarity=0.322 Sum_probs=35.8
Q ss_pred CCcEEEEeCCcccc-ccccCCCCCCCccceeeeccccceEEEEecCcHHHHHH-HhhccceEEEEcCCchHHHHHHHHHh
Q 015573 210 PPTTLVLDLDETLV-HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLE-RVSSLFEIIIFTASQSIYAEQLLNVL 287 (404)
Q Consensus 210 ~kktLVLDLDeTLV-hS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~-~Ls~~yEIvIfTAs~k~YA~~VLd~L 287 (404)
|+..|+.||||||+ .... -+.-+.++|+ ......-+++-|..+..-+..++...
T Consensus 1 ~~~ll~sDlD~Tl~~~~~~------------------------~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~ 56 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGDDE------------------------ALARLEELLEQQARPEILFVYVTGRSLESVLRLLREY 56 (247)
T ss_dssp -SEEEEEETBTTTBHCHHH------------------------HHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHC
T ss_pred CCEEEEEECCCCCcCCCHH------------------------HHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhC
Confidence 36789999999999 2110 1344556666 33466777788888888888888765
Q ss_pred C
Q 015573 288 D 288 (404)
Q Consensus 288 D 288 (404)
.
T Consensus 57 ~ 57 (247)
T PF05116_consen 57 N 57 (247)
T ss_dssp T
T ss_pred C
Confidence 4
No 176
>PRK11590 hypothetical protein; Provisional
Probab=73.66 E-value=4.8 Score=37.62 Aligned_cols=17 Identities=29% Similarity=0.409 Sum_probs=14.1
Q ss_pred CCcEEEEeCCccccccc
Q 015573 210 PPTTLVLDLDETLVHST 226 (404)
Q Consensus 210 ~kktLVLDLDeTLVhS~ 226 (404)
+++.++|||||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 46799999999999643
No 177
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=72.46 E-value=2.9 Score=45.03 Aligned_cols=86 Identities=13% Similarity=0.118 Sum_probs=60.9
Q ss_pred EEecCcHHHHHHHhh-ccc-eEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEE
Q 015573 250 VRCRPYLKDFLERVS-SLF-EIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIV 327 (404)
Q Consensus 250 V~~RPgl~eFL~~Ls-~~y-EIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIV 327 (404)
...||++.+.|++|. +.+ +++|-|+....+|..+++.++..+ +|.... ...+ .+-++.++...++|++|
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~~-----p~~K---~~~i~~l~~~~~~v~~v 431 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAELL-----PEDK---LEIVKELREKYGPVAMV 431 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhccC-----cHHH---HHHHHHHHhcCCEEEEE
Confidence 457999999999999 678 999999999999999999998764 443211 1111 23344455666899999
Q ss_pred ECCcccccccccccccc
Q 015573 328 DNSPQAFGFQVDNGIPI 344 (404)
Q Consensus 328 DDsp~s~~~qp~NgI~I 344 (404)
-|...-...-...++-|
T Consensus 432 GDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 432 GDGINDAPALAAADVGI 448 (536)
T ss_pred eCCHHHHHHHHhCCEEE
Confidence 99976654433334433
No 178
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=71.25 E-value=1.9 Score=36.98 Aligned_cols=14 Identities=43% Similarity=0.714 Sum_probs=12.1
Q ss_pred EEEeCCcccccccc
Q 015573 214 LVLDLDETLVHSTL 227 (404)
Q Consensus 214 LVLDLDeTLVhS~~ 227 (404)
|+||+||||+++..
T Consensus 1 iifD~dgtL~d~~~ 14 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP 14 (176)
T ss_dssp EEEESBTTTEEHHH
T ss_pred cEEECCCCcEeCHH
Confidence 68999999998753
No 179
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=70.09 E-value=12 Score=34.49 Aligned_cols=60 Identities=18% Similarity=0.298 Sum_probs=39.0
Q ss_pred EEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHH
Q 015573 214 LVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLN 285 (404)
Q Consensus 214 LVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd 285 (404)
+|.|+||||.-|-.. . ...+ ..+.. +.+||+-++...+. ..|.|+=-||-.-..|...-.
T Consensus 2 VvsDIDGTiT~SD~~--G---~i~~----~~G~d---~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~ 62 (157)
T PF08235_consen 2 VVSDIDGTITKSDVL--G---HILP----ILGKD---WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRS 62 (157)
T ss_pred EEEeccCCcCccchh--h---hhhh----ccCch---hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHH
Confidence 688999999887320 0 0000 01111 45999999999999 779888778776555544433
No 180
>PLN02382 probable sucrose-phosphatase
Probab=68.70 E-value=9.9 Score=39.85 Aligned_cols=17 Identities=41% Similarity=0.622 Sum_probs=14.3
Q ss_pred CCCcEEEEeCCcccccc
Q 015573 209 CPPTTLVLDLDETLVHS 225 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS 225 (404)
.+++.|+.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 35788999999999975
No 181
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=66.18 E-value=6.1 Score=35.18 Aligned_cols=46 Identities=11% Similarity=0.229 Sum_probs=36.9
Q ss_pred cCcHH----HHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCC-CeeeEEE
Q 015573 253 RPYLK----DFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKR-KLFRHRV 298 (404)
Q Consensus 253 RPgl~----eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~-~lF~~rL 298 (404)
+|++. +||+++. ..++++|-|++...+++++++.++... .++...+
T Consensus 87 ~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 87 FPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp CTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred CcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 47777 9999986 899999999999999999999887543 2344444
No 182
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=66.00 E-value=8.4 Score=36.36 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=33.4
Q ss_pred EecCcHHHHHH-Hhh-ccceEEEEcCCchHHHHHHHHHh
Q 015573 251 RCRPYLKDFLE-RVS-SLFEIIIFTASQSIYAEQLLNVL 287 (404)
Q Consensus 251 ~~RPgl~eFL~-~Ls-~~yEIvIfTAs~k~YA~~VLd~L 287 (404)
..+||+.+.|+ .+. +.+.|+|-|++...|++++++..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 56999999995 788 79999999999999999999774
No 183
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=61.59 E-value=25 Score=34.66 Aligned_cols=57 Identities=21% Similarity=0.241 Sum_probs=36.8
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
.+.+.+|||+|||..+.++ -| +...|.++. ..|+||..|+-+..-...+-+.|+.
T Consensus 7 ~~lIFtDlD~TLl~~~ye~-----------------------~p-A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEW-----------------------QP-AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred ceEEEEcccCcccCCCCCC-----------------------Cc-cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCC
Confidence 4567779999999832211 11 123455666 7899999988776555555667776
Q ss_pred CC
Q 015573 290 KR 291 (404)
Q Consensus 290 ~~ 291 (404)
.+
T Consensus 63 ~~ 64 (274)
T COG3769 63 QG 64 (274)
T ss_pred CC
Confidence 54
No 184
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=61.03 E-value=4.7 Score=37.71 Aligned_cols=16 Identities=19% Similarity=0.401 Sum_probs=13.8
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
++++++|+||||+.+.
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 5689999999999874
No 185
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=60.66 E-value=11 Score=43.21 Aligned_cols=59 Identities=15% Similarity=0.099 Sum_probs=40.7
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh--ccceEEEEcCCchHHHHHHHHH
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS--SLFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls--~~yEIvIfTAs~k~YA~~VLd~ 286 (404)
.++..|+||+||||+..... -+..-|++.+.|+.|. +...++|.|.-...-.+.++.-
T Consensus 594 ~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred hcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 35788999999999954210 0012467888888875 5677888888777777776654
Q ss_pred h
Q 015573 287 L 287 (404)
Q Consensus 287 L 287 (404)
+
T Consensus 654 ~ 654 (854)
T PLN02205 654 C 654 (854)
T ss_pred C
Confidence 4
No 186
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=58.78 E-value=19 Score=32.90 Aligned_cols=41 Identities=24% Similarity=0.331 Sum_probs=25.2
Q ss_pred ecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCee
Q 015573 252 CRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLF 294 (404)
Q Consensus 252 ~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF 294 (404)
.|-.+.+||+.+. ++-.|++|-|+.+. ..+|..++....++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg--~tlln~~g~~~~~I 94 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKG--NTLLNYFGLDNDLI 94 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHH--HHHHHHHT--TTTS
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHH--HHHHHHhCCCccee
Confidence 3666788888887 67789999999984 55678887755444
No 187
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=54.58 E-value=7 Score=36.90 Aligned_cols=16 Identities=31% Similarity=0.459 Sum_probs=13.9
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
++..+||+||||++..
T Consensus 5 ~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 5 KRIIFFDLDGTLHQQD 20 (210)
T ss_pred CcEEEEcCCCCCccCc
Confidence 6789999999999863
No 188
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=54.43 E-value=7.1 Score=35.89 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=13.8
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
.++++||+||||++..
T Consensus 4 ~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 4 IKAILFDLDGTLLDFD 19 (229)
T ss_pred eeEEEEecCCcccccc
Confidence 4689999999999964
No 189
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=49.79 E-value=9.3 Score=33.99 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=11.4
Q ss_pred EEEeCCccccccc
Q 015573 214 LVLDLDETLVHST 226 (404)
Q Consensus 214 LVLDLDeTLVhS~ 226 (404)
+|||+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999874
No 190
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=49.37 E-value=31 Score=39.31 Aligned_cols=64 Identities=16% Similarity=0.184 Sum_probs=44.7
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhc--cceEEEEcCCchHHHHHHHHH
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSS--LFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~--~yEIvIfTAs~k~YA~~VLd~ 286 (404)
.++..|+||.||||+.....+. ...-+..-|++.+.|+.|+. .-.|+|-|.-...-.+.++..
T Consensus 505 a~~rll~LDyDGTL~~~~~~~~---------------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 505 SNNRLLILGFYGTLTEPRNSQI---------------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred ccCeEEEEecCccccCCCCCcc---------------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 4567889999999985322110 00112346889999999984 578999998888888877754
Q ss_pred h
Q 015573 287 L 287 (404)
Q Consensus 287 L 287 (404)
+
T Consensus 570 ~ 570 (797)
T PLN03063 570 Y 570 (797)
T ss_pred C
Confidence 3
No 191
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=48.81 E-value=19 Score=35.49 Aligned_cols=113 Identities=19% Similarity=0.321 Sum_probs=61.8
Q ss_pred EEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhC---CCCCeeeEEEEecceee---ecC----ceeeccccc
Q 015573 249 YVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLD---PKRKLFRHRVFRESCVF---VDG----NYLKDLSVL 317 (404)
Q Consensus 249 ~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LD---P~~~lF~~rL~Rd~C~~---~~g----~yvKDLs~L 317 (404)
-+.+|.|+.+|++.|. ...-+.|||||--.-.+.+|+.-. |+=++++..+.-+.... .++ .|.|+-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 4678999999999999 558999999999999999999864 22234555444322111 122 144543333
Q ss_pred --------CCCCCcEEEEECCcccccc-----ccccccccccccCCCCcHHHHhHHHHHhh
Q 015573 318 --------GRDLSHVIIVDNSPQAFGF-----QVDNGIPIESWFDDRSDQELLLLLPFLES 365 (404)
Q Consensus 318 --------grdls~vIIVDDsp~s~~~-----qp~NgI~I~~f~gd~~D~eLl~LlpfLe~ 365 (404)
-..-.|||++=|+..-..+ ..+|.|.|- |-.+.-|. .|-.|++.
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIG-FLn~~ve~---~l~~Y~~~ 224 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIG-FLNDKVEE---NLEKYLEA 224 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEE-EE-SSHHH---HHHHHHCC
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEE-ecccCHHH---HHHHHHhc
Confidence 1244689999999876533 335555553 33333222 24455554
No 192
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=47.66 E-value=8.7 Score=33.87 Aligned_cols=13 Identities=31% Similarity=0.560 Sum_probs=11.1
Q ss_pred EEEeCCccccccc
Q 015573 214 LVLDLDETLVHST 226 (404)
Q Consensus 214 LVLDLDeTLVhS~ 226 (404)
+|||+||||+...
T Consensus 2 ~~fD~DgTl~~~~ 14 (177)
T TIGR01488 2 AIFDFDGTLTRQD 14 (177)
T ss_pred EEecCccccccch
Confidence 6899999999753
No 193
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=45.57 E-value=19 Score=34.10 Aligned_cols=51 Identities=22% Similarity=0.227 Sum_probs=29.7
Q ss_pred EEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhccce--EEEEcCCchHHHHHH
Q 015573 215 VLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFE--IIIFTASQSIYAEQL 283 (404)
Q Consensus 215 VLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~~yE--IvIfTAs~k~YA~~V 283 (404)
.||.||||.--...| .-...-|++.+.|+.|+.... |+|-|.-.....+..
T Consensus 1 ~lDyDGTL~p~~~~p------------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP------------------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp EEE-TTTSS---S-G------------------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred CcccCCccCCCCCCc------------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 489999997643321 112347899999999997766 888888777664333
No 194
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=45.20 E-value=10 Score=34.34 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=11.2
Q ss_pred EEEeCCccccccc
Q 015573 214 LVLDLDETLVHST 226 (404)
Q Consensus 214 LVLDLDeTLVhS~ 226 (404)
.+||+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999863
No 195
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=44.11 E-value=34 Score=36.14 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=35.5
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCc
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQ 276 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~ 276 (404)
.+.+.||||||||...... . |......|.+..++.... |+.+. +.|-++|||...
T Consensus 75 ~K~i~FD~dgtlI~t~sg~------v----f~~~~~dw~~l~~~vp~K-lktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 75 SKIIMFDYDGTLIDTKSGK------V----FPKGSMDWRILFPEVPSK-LKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred cceEEEecCCceeecCCcc------e----eeccCccceeeccccchh-hhhhccCCeEEEEEeccc
Confidence 5778999999999974311 1 112233455545555555 55665 889999999644
No 196
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=43.61 E-value=14 Score=43.38 Aligned_cols=16 Identities=25% Similarity=0.513 Sum_probs=14.2
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
-+.++|||||||+++.
T Consensus 75 ikaVIFDlDGTLiDS~ 90 (1057)
T PLN02919 75 VSAVLFDMDGVLCNSE 90 (1057)
T ss_pred CCEEEECCCCCeEeCh
Confidence 4679999999999986
No 197
>PRK10671 copA copper exporting ATPase; Provisional
Probab=41.41 E-value=25 Score=39.97 Aligned_cols=85 Identities=11% Similarity=0.084 Sum_probs=59.6
Q ss_pred EecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEEC
Q 015573 251 RCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDN 329 (404)
Q Consensus 251 ~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDD 329 (404)
..||++.+.|++|. ..+++++.|......|+.+++.++... +|.... ...+ .+-++.++...++|++|-|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-~~~~~~-----p~~K---~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-VIAGVL-----PDGK---AEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-EEeCCC-----HHHH---HHHHHHHhhcCCEEEEEeC
Confidence 46999999999998 779999999999999999999998754 442211 0112 2233344555678999999
Q ss_pred Ccccccccccccccc
Q 015573 330 SPQAFGFQVDNGIPI 344 (404)
Q Consensus 330 sp~s~~~qp~NgI~I 344 (404)
...-...-...++-|
T Consensus 721 g~nD~~al~~Agvgi 735 (834)
T PRK10671 721 GINDAPALAQADVGI 735 (834)
T ss_pred CHHHHHHHHhCCeeE
Confidence 887664433444433
No 198
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=40.79 E-value=47 Score=38.75 Aligned_cols=70 Identities=20% Similarity=0.282 Sum_probs=46.7
Q ss_pred CCCcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhhc--cceEEEEcCCchHHHHHHHHH
Q 015573 209 CPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSS--LFEIIIFTASQSIYAEQLLNV 286 (404)
Q Consensus 209 ~~kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls~--~yEIvIfTAs~k~YA~~VLd~ 286 (404)
.++..|+||.||||+.-...|....... ....+..-|.+.+.|+.|.. ...|+|-|.-...-.+.++..
T Consensus 589 a~~RLlfLDyDGTLap~~~~P~~~~~~~---------~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~ 659 (934)
T PLN03064 589 SNNRLLILGFNATLTEPVDTPGRRGDQI---------KEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGE 659 (934)
T ss_pred ccceEEEEecCceeccCCCCcccccccc---------cccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCC
Confidence 4567889999999986533221100000 00122345788999999994 588999999998888888765
Q ss_pred h
Q 015573 287 L 287 (404)
Q Consensus 287 L 287 (404)
+
T Consensus 660 ~ 660 (934)
T PLN03064 660 F 660 (934)
T ss_pred C
Confidence 5
No 199
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=40.68 E-value=17 Score=32.65 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=12.7
Q ss_pred cEEEEeCCccccccc
Q 015573 212 TTLVLDLDETLVHST 226 (404)
Q Consensus 212 ktLVLDLDeTLVhS~ 226 (404)
.+++||+||||....
T Consensus 2 ~~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 2 DAICFDKTGTLTQGK 16 (215)
T ss_dssp SEEEEECCTTTBESH
T ss_pred eEEEEecCCCcccCe
Confidence 479999999998764
No 200
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=40.50 E-value=41 Score=35.93 Aligned_cols=52 Identities=29% Similarity=0.471 Sum_probs=39.4
Q ss_pred EEEEecCcHHHHHHHhhcc-ceEEEEcCCchHHHHHHHHHh-CC-------CCCeeeEEEE
Q 015573 248 VYVRCRPYLKDFLERVSSL-FEIIIFTASQSIYAEQLLNVL-DP-------KRKLFRHRVF 299 (404)
Q Consensus 248 ~~V~~RPgl~eFL~~Ls~~-yEIvIfTAs~k~YA~~VLd~L-DP-------~~~lF~~rL~ 299 (404)
-||.+-|.+..+|+.|.+. -.+.+-|.|...|++.+++.+ ++ ++.||+-++.
T Consensus 180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 4677789999999999955 589999999999999999964 55 5678877665
No 201
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=40.30 E-value=19 Score=34.55 Aligned_cols=90 Identities=14% Similarity=0.193 Sum_probs=61.1
Q ss_pred EecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHH----HHhCCCCCeeeEEEEecceee-ecCceeecccccCCCCCcE
Q 015573 251 RCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLL----NVLDPKRKLFRHRVFRESCVF-VDGNYLKDLSVLGRDLSHV 324 (404)
Q Consensus 251 ~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VL----d~LDP~~~lF~~rL~Rd~C~~-~~g~yvKDLs~Lgrdls~v 324 (404)
.+=|.+-++|++-. ....|+|||+++-. |++++ +..|..+ ||+..+-...-.. ..+.|.|-+..+|..+..+
T Consensus 103 hlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~~-lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ei 180 (229)
T COG4229 103 HLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLNS-LFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEI 180 (229)
T ss_pred ccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHHh-hhcceeeccccccccchhHHHHHHhcCCCchhe
Confidence 34688999998877 78999999999865 44432 2344443 6655443222111 1235899999999999999
Q ss_pred EEEECCcccccccccccc
Q 015573 325 IIVDNSPQAFGFQVDNGI 342 (404)
Q Consensus 325 IIVDDsp~s~~~qp~NgI 342 (404)
+++-|.|.......+-|+
T Consensus 181 lFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 181 LFLSDNPEELKAAAGVGL 198 (229)
T ss_pred EEecCCHHHHHHHHhcch
Confidence 999999987654444443
No 202
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=37.87 E-value=1.5e+02 Score=27.02 Aligned_cols=117 Identities=15% Similarity=0.204 Sum_probs=66.5
Q ss_pred CcEEEEeCCccccccccCCCCCCCccc-eeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCC-chHHHHHHHHHh
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTF-PVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTAS-QSIYAEQLLNVL 287 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~-~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs-~k~YA~~VLd~L 287 (404)
+.+++||||-||.-.-.. .+.++.| |+...-...+.-...=|...--|..|+ +..++++.+-+ ...||.+.|+.+
T Consensus 5 p~~~~fdldytiwP~~vd--thl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 5 PEAMQFDLDYTIWPRLVD--THLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred CceeEEeccceeeeEEEE--ecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh
Confidence 567888888888543210 0111111 111111222333444577888899999 78999999877 579999999988
Q ss_pred CCCC--------CeeeEEEEecceeeecCceeecccc-cCCCCCcEEEEECCcc
Q 015573 288 DPKR--------KLFRHRVFRESCVFVDGNYLKDLSV-LGRDLSHVIIVDNSPQ 332 (404)
Q Consensus 288 DP~~--------~lF~~rL~Rd~C~~~~g~yvKDLs~-Lgrdls~vIIVDDsp~ 332 (404)
.... ..|......+-.. -| +.|++.. -|...++..+.||...
T Consensus 83 kvk~~Gvlkps~e~ft~~~~g~gsk--lg-hfke~~n~s~~~~k~~~~fdDesr 133 (144)
T KOG4549|consen 83 KVKQTGVLKPSLEEFTFEAVGDGSK--LG-HFKEFTNNSNSIEKNKQVFDDESR 133 (144)
T ss_pred ccCcccccchhhhcCceeeecCccc--ch-hHHHHhhccCcchhceeeeccccc
Confidence 6432 1222222221111 12 2366543 2667778888888654
No 203
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=31.83 E-value=70 Score=26.54 Aligned_cols=16 Identities=50% Similarity=0.455 Sum_probs=13.7
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
..+|||+=|||.|.+.
T Consensus 39 ~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 39 VLTLVLEEDGTAVDSE 54 (81)
T ss_pred ceEEEEecCCCEEccH
Confidence 3689999999999863
No 204
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=30.76 E-value=92 Score=25.65 Aligned_cols=16 Identities=44% Similarity=0.520 Sum_probs=13.7
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
..+|||+=|||.|.+.
T Consensus 40 ~~~lvL~eDGT~Vd~E 55 (78)
T cd06539 40 LVTLVLEEDGTVVDTE 55 (78)
T ss_pred CcEEEEeCCCCEEccH
Confidence 4689999999999863
No 205
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=29.21 E-value=1.1e+02 Score=27.49 Aligned_cols=63 Identities=19% Similarity=0.264 Sum_probs=40.9
Q ss_pred ecCcHHHHHHHhh-ccceEEEEcCCch-HHHHHHHHHhCCCCCeeeEEEEecceeeecCceeecccccCCCCCcEEEEEC
Q 015573 252 CRPYLKDFLERVS-SLFEIIIFTASQS-IYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDN 329 (404)
Q Consensus 252 ~RPgl~eFL~~Ls-~~yEIvIfTAs~k-~YA~~VLd~LDP~~~lF~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDD 329 (404)
.++.+.++++.+. ..+.+.|+|.... +--+.++..+|- ...|.|+.++..++..-+|=+|+|-
T Consensus 73 ~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~---------------l~~g~y~~~~~~~~~~~sNQ~~~~~ 137 (147)
T TIGR02826 73 NREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY---------------LKTGRWIHTRGGLGSPTTNQIFIDL 137 (147)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE---------------EEEChHHHHcCCCCCCCcCceEEEC
Confidence 5789999999998 5699999997654 223455555541 1345566666555544457777764
No 206
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=28.84 E-value=94 Score=30.57 Aligned_cols=103 Identities=18% Similarity=0.288 Sum_probs=61.8
Q ss_pred CcEEEEeCCccccccccCCCCCCCccceeeeccccceEEEEecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCC
Q 015573 211 PTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDP 289 (404)
Q Consensus 211 kktLVLDLDeTLVhS~~~~~~~~d~~~~v~~~~~~~~~~V~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP 289 (404)
-+.+.|||-|||-.+. ..-||..|-|+.|. ++-.|-..|.++++--..+.+.|..
T Consensus 7 v~gvLlDlSGtLh~e~------------------------~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~r 62 (262)
T KOG3040|consen 7 VKGVLLDLSGTLHIED------------------------AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQR 62 (262)
T ss_pred cceEEEeccceEeccc------------------------ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHH
Confidence 4568899999995441 13699999999999 8888888888887765556555432
Q ss_pred CC------Cee----------eEEEEecceeeecCceeecccccCCCCCcEEEEECCcccccccc
Q 015573 290 KR------KLF----------RHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQV 338 (404)
Q Consensus 290 ~~------~lF----------~~rL~Rd~C~~~~g~yvKDLs~Lgrdls~vIIVDDsp~s~~~qp 338 (404)
-+ .+| ...-+|.+-...+ .-..|..-+.-+--|+|+|-..|.+|.+|.
T Consensus 63 lgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~d-~a~~dF~gidTs~pn~VViglape~F~y~~ 126 (262)
T KOG3040|consen 63 LGFDVSEEEIFTSLPAARQYLEENQLRPYLIVDD-DALEDFDGIDTSDPNCVVIGLAPEGFSYQR 126 (262)
T ss_pred hCCCccHHHhcCccHHHHHHHHhcCCCceEEEcc-cchhhCCCccCCCCCeEEEecCcccccHHH
Confidence 11 011 1111111111111 112333333344568899999999987654
No 207
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=27.95 E-value=87 Score=25.85 Aligned_cols=15 Identities=47% Similarity=0.468 Sum_probs=13.2
Q ss_pred CcEEEEeCCcccccc
Q 015573 211 PTTLVLDLDETLVHS 225 (404)
Q Consensus 211 kktLVLDLDeTLVhS 225 (404)
..+|||+-|||.|.+
T Consensus 39 ~~~lvL~eDGT~Vd~ 53 (79)
T cd06538 39 ISSLVLDEDGTGVDT 53 (79)
T ss_pred ccEEEEecCCcEEcc
Confidence 368999999999976
No 208
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=27.91 E-value=98 Score=25.24 Aligned_cols=16 Identities=50% Similarity=0.725 Sum_probs=13.7
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
..+|||+=|||.|.+.
T Consensus 38 ~~~l~L~eDGT~VddE 53 (74)
T smart00266 38 PVTLVLEEDGTIVDDE 53 (74)
T ss_pred CcEEEEecCCcEEccH
Confidence 4689999999999863
No 209
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=27.59 E-value=32 Score=37.13 Aligned_cols=23 Identities=30% Similarity=0.387 Sum_probs=19.0
Q ss_pred eEEEEcCCchHHHHHHHHH-hCCC
Q 015573 268 EIIIFTASQSIYAEQLLNV-LDPK 290 (404)
Q Consensus 268 EIvIfTAs~k~YA~~VLd~-LDP~ 290 (404)
+.+|-||+...|++++++. ++-+
T Consensus 124 ~~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 124 KRYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CEEEEECCcHHHHHHHHHHcCCCC
Confidence 4599999999999999975 6543
No 210
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=26.97 E-value=2e+02 Score=28.01 Aligned_cols=97 Identities=8% Similarity=0.209 Sum_probs=63.6
Q ss_pred EecCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCC-CeeeEEE-Eecceeeec-----------C--ceeecc
Q 015573 251 RCRPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKR-KLFRHRV-FRESCVFVD-----------G--NYLKDL 314 (404)
Q Consensus 251 ~~RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~-~lF~~rL-~Rd~C~~~~-----------g--~yvKDL 314 (404)
.+-||+.|+...|. +...|++-|-+-...+.+|.+.|+... ..|..+| |-.+-.+.. | .-++-|
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 45799999999999 789999999999999999999998653 2333332 222211111 1 123334
Q ss_pred cccCCCCCcEEEEECCccccccccccccccccccC
Q 015573 315 SVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFD 349 (404)
Q Consensus 315 s~Lgrdls~vIIVDDsp~s~~~qp~NgI~I~~f~g 349 (404)
+. |++-+.++.|-|-..-...-|. |+-...|-+
T Consensus 168 rk-~~~~~~~~mvGDGatDlea~~p-a~afi~~~g 200 (227)
T KOG1615|consen 168 RK-NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGG 200 (227)
T ss_pred Hh-CCChheeEEecCCccccccCCc-hhhhhccCC
Confidence 44 8888889999887766644333 444444433
No 211
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=26.34 E-value=1e+02 Score=25.34 Aligned_cols=15 Identities=53% Similarity=0.651 Sum_probs=13.4
Q ss_pred CcEEEEeCCcccccc
Q 015573 211 PTTLVLDLDETLVHS 225 (404)
Q Consensus 211 kktLVLDLDeTLVhS 225 (404)
..+|||+-|||.|..
T Consensus 40 ~~~lvL~eDGTeVdd 54 (78)
T cd01615 40 PVTLVLEEDGTEVDD 54 (78)
T ss_pred CeEEEEeCCCcEEcc
Confidence 568999999999976
No 212
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=26.18 E-value=49 Score=27.14 Aligned_cols=15 Identities=47% Similarity=0.592 Sum_probs=13.3
Q ss_pred CcEEEEeCCcccccc
Q 015573 211 PTTLVLDLDETLVHS 225 (404)
Q Consensus 211 kktLVLDLDeTLVhS 225 (404)
..+|||+-|||.|..
T Consensus 40 ~~~lvL~eDGT~Vdd 54 (78)
T PF02017_consen 40 PVRLVLEEDGTEVDD 54 (78)
T ss_dssp TCEEEETTTTCBESS
T ss_pred CcEEEEeCCCcEEcc
Confidence 468999999999986
No 213
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=26.06 E-value=40 Score=30.91 Aligned_cols=16 Identities=19% Similarity=0.374 Sum_probs=11.8
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
|..|.+||||||.+..
T Consensus 2 ~i~I~iDiDgVLad~~ 17 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFN 17 (191)
T ss_dssp -EEEEEESBTTTB-HH
T ss_pred CcEEEEECCCCCcccH
Confidence 4459999999999864
No 214
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=26.00 E-value=1e+02 Score=25.54 Aligned_cols=16 Identities=50% Similarity=0.650 Sum_probs=13.8
Q ss_pred CcEEEEeCCccccccc
Q 015573 211 PTTLVLDLDETLVHST 226 (404)
Q Consensus 211 kktLVLDLDeTLVhS~ 226 (404)
..+|||+-|||.|.+.
T Consensus 42 ~~~lvL~eDGT~VddE 57 (80)
T cd06536 42 PITLVLAEDGTIVEDE 57 (80)
T ss_pred ceEEEEecCCcEEccH
Confidence 5789999999999763
No 215
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=25.46 E-value=6.4 Score=37.51 Aligned_cols=88 Identities=8% Similarity=-0.049 Sum_probs=55.5
Q ss_pred cCcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEE--EEecceeeecCc---eeecccccCC-CCCcEE
Q 015573 253 RPYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHR--VFRESCVFVDGN---YLKDLSVLGR-DLSHVI 325 (404)
Q Consensus 253 RPgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~r--L~Rd~C~~~~g~---yvKDLs~Lgr-dls~vI 325 (404)
-|++.+.|+.+. +...+ |-|.....|+...+..++.. .+|... ...+.....+.. |..-+..+|. +.++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g-~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG-YYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc-HHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 488999999876 46666 66998889998777776644 244321 223332222322 5666777774 467999
Q ss_pred EEECCc-ccccccccccc
Q 015573 326 IVDNSP-QAFGFQVDNGI 342 (404)
Q Consensus 326 IVDDsp-~s~~~qp~NgI 342 (404)
+|.|+. .-...-..+|+
T Consensus 218 ~vGD~~~~Di~~a~~~G~ 235 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGI 235 (242)
T ss_pred EECCCcHHHHHHHHHCCC
Confidence 999995 44443444444
No 216
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=22.02 E-value=57 Score=35.42 Aligned_cols=23 Identities=13% Similarity=0.255 Sum_probs=20.4
Q ss_pred eEEEEcCCchHHHHHHHHH-hCCC
Q 015573 268 EIIIFTASQSIYAEQLLNV-LDPK 290 (404)
Q Consensus 268 EIvIfTAs~k~YA~~VLd~-LDP~ 290 (404)
+++|-||+.+.++++-++. ++-+
T Consensus 110 ~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 110 KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 9999999999999999997 6544
No 217
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=21.84 E-value=7.4 Score=37.73 Aligned_cols=91 Identities=13% Similarity=0.151 Sum_probs=54.5
Q ss_pred CcHHHHHHHhh-ccceEEEEcCCchHHHHHHHHHhCCCCCeeeEEEE---ecceeeecCc---eeecccccCCCCCcEEE
Q 015573 254 PYLKDFLERVS-SLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVF---RESCVFVDGN---YLKDLSVLGRDLSHVII 326 (404)
Q Consensus 254 Pgl~eFL~~Ls-~~yEIvIfTAs~k~YA~~VLd~LDP~~~lF~~rL~---Rd~C~~~~g~---yvKDLs~Lgrdls~vII 326 (404)
|++.+-++.|. ..+.++|.|+....++...+..++... +|....+ ++.....+.. |..-+..+|.+++++++
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~-~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~ 201 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP-FVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVM 201 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH-HHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEE
Confidence 55666677776 557888888877777665555544432 4422111 1111112222 56677788999999999
Q ss_pred EECCc-cccccccccccccc
Q 015573 327 VDNSP-QAFGFQVDNGIPIE 345 (404)
Q Consensus 327 VDDsp-~s~~~qp~NgI~I~ 345 (404)
|.|+. .-...-..+|+...
T Consensus 202 vGD~~~~Di~~a~~~G~~~i 221 (257)
T TIGR01458 202 IGDDCRDDVGGAQDCGMRGI 221 (257)
T ss_pred ECCCcHHHHHHHHHcCCeEE
Confidence 99886 44544445555543
Done!