Query 015574
Match_columns 404
No_of_seqs 119 out of 140
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 14:59:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015574.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015574hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jfia_ a.22.1.3 (A:) Negative 31.7 36 0.0026 23.7 5.0 50 161-211 6-55 (66)
2 d2bdea1 c.108.1.23 (A:2-459) C 29.6 27 0.002 33.5 5.2 36 237-272 324-359 (458)
3 d1r6ta1 a.16.1.3 (A:7-60) N-te 22.2 55 0.004 22.9 4.4 49 288-340 2-50 (54)
4 d2pjqa1 a.211.1.1 (A:1-215) Un 22.1 45 0.0033 28.0 4.7 71 186-259 118-211 (215)
5 d2o3fa1 a.4.1.20 (A:1-83) Puta 19.9 33 0.0024 25.1 2.9 65 144-219 5-69 (83)
6 d1htaa_ a.22.1.2 (A:) Archaeal 19.9 36 0.0026 23.6 3.0 52 155-211 4-55 (68)
7 d1ku5a_ a.22.1.2 (A:) Archaeal 18.9 48 0.0035 22.9 3.5 44 167-211 11-54 (66)
8 d1ugoa_ a.7.7.1 (A:) BAG-famil 18.3 1.3E+02 0.0094 22.9 6.3 37 188-224 19-55 (99)
9 d1zaka1 c.37.1.1 (A:3-127,A:15 17.0 1.3E+02 0.0092 23.2 6.1 49 290-338 131-186 (189)
10 d1ojta2 c.3.1.5 (A:276-400) Di 13.5 22 0.0016 27.4 0.4 37 84-122 23-59 (125)
No 1
>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.68 E-value=36 Score=23.70 Aligned_cols=50 Identities=10% Similarity=0.058 Sum_probs=37.1
Q ss_pred HHhhhhccCcccchhccccChHHHHHHHHHHHHHHHhHHHHhHhhhhccCC
Q 015574 161 RQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSK 211 (404)
Q Consensus 161 ~rLR~evL~SeGV~~LVS~D~~~LL~LA~AEk~eeL~~~A~sVaRLG~rC~ 211 (404)
.|.|. ||++..=-..||.|--+++.-|+-....+|-.-|..+++-.+|..
T Consensus 6 srVkk-imk~~~~~~~is~~A~~~~~~a~E~Fi~~l~~~A~~~a~~~krkt 55 (66)
T d1jfia_ 6 ARIKK-IMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 55 (66)
T ss_dssp HHHHH-HHTTSTTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---C
T ss_pred HHHHH-HHhcCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 34444 444333335899999999999999999999999999998877654
No 2
>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}
Probab=29.63 E-value=27 Score=33.52 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 015574 237 QEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQH 272 (404)
Q Consensus 237 k~ae~kmkKmerlV~~TA~LY~ELeaL~elEq~~Rr 272 (404)
+|.+..++.+.+-......|-.-+..+.+++|.+..
T Consensus 324 ~ELe~Ei~~~~~~~~~~~~l~~l~~~~~~l~~~~~~ 359 (458)
T d2bdea1 324 EELGEEIASQIRALPIEKKIGEAMAIKKELEQKYVD 359 (458)
T ss_dssp TTHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 455555554443333333333333334456665543
No 3
>d1r6ta1 a.16.1.3 (A:7-60) N-terminal domain of eukaryotic tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.16 E-value=55 Score=22.89 Aligned_cols=49 Identities=20% Similarity=0.245 Sum_probs=33.0
Q ss_pred cHHHHHHHHHHHHHHHHhhhhcccccccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 015574 288 SFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGS 340 (404)
Q Consensus 288 ~l~~lqqklk~QRq~VK~LKk~SLWsrt~D~VVekLvriV~tI~~rI~~VFG~ 340 (404)
++.+|.++|..|=-.||.||..--=....|..|.+|- -+=+..+.+.|.
T Consensus 2 S~~eL~~~I~~QGd~VR~LKa~ka~K~~id~aV~~LL----~LK~~yk~~tG~ 50 (54)
T d1r6ta1 2 SLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLV----SLKMSYKAAAGE 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH----HHHHHHHHHSSS
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHH----HHHHHHHHhhCC
Confidence 4678999999999999999976443434455555553 334555666553
No 4
>d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]}
Probab=22.10 E-value=45 Score=27.98 Aligned_cols=71 Identities=18% Similarity=0.288 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhH--HHHhHhhh---hccCCCcccc----------------chhHHHHHHhh--cccchhhhHHHHHHH
Q 015574 186 KIFAADKRDDLKI--FTGEVVRF---GNRSKDPQWH----------------NLGRYFEKISR--ELIPQKQLKQEAELL 242 (404)
Q Consensus 186 ~LA~AEk~eeL~~--~A~sVaRL---G~rC~DP~lh----------------~fdr~F~~l~~--~~~~~~~~~k~ae~k 242 (404)
-+-=||++|.|-. +|+..+-- |+.=.||.+. .++|+|++|.. +..--..-++.|+++
T Consensus 118 Iv~DADrLDalGaiGIaR~f~y~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~i~Hf~eKLl~l~~~m~T~~gk~lA~~R 197 (215)
T d2pjqa1 118 VVQDADRLDAIGAIGIARALYYSGHVGEKIYDPAIAPREHMTREQYRHQPGTAINHFYEKLFKLAALMNTDTAKALAAHR 197 (215)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHHHHTCCSCCTTSCCCSSCCHHHHHHSCCCTTHHHHHTGGGHHHHCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHhCCcccCcccccccccchhhhhcCCccHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3567899998876 55655533 3344566432 48899988865 221112335678888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015574 243 MEQLMTLVQHTAELYNE 259 (404)
Q Consensus 243 mkKmerlV~~TA~LY~E 259 (404)
.+-|+.|++ +|+.|
T Consensus 198 ~~~m~~Fl~---~~~~E 211 (215)
T d2pjqa1 198 TAVMHEFVD---QFKAE 211 (215)
T ss_dssp HHHHHHHHH---HHHHH
T ss_pred HHHHHHHHH---HHHHH
Confidence 888888774 44444
No 5
>d2o3fa1 a.4.1.20 (A:1-83) Putative transcriptional regulator YbbH {Bacillus subtilis [TaxId: 1423]}
Probab=19.94 E-value=33 Score=25.12 Aligned_cols=65 Identities=6% Similarity=0.047 Sum_probs=51.2
Q ss_pred HHHHHHHhhhcCChHHHHHhhhhccCcccchhccccChHHHHHHHHHHHHHHHhHHHHhHhhhhccCCCccccchh
Q 015574 144 TIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLG 219 (404)
Q Consensus 144 tMSKl~~L~~SLSd~eI~rLR~evL~SeGV~~LVS~D~~~LL~LA~AEk~eeL~~~A~sVaRLG~rC~DP~lh~fd 219 (404)
.|.++-..+.+||..|-. |.+-|-++.+.+..+-..|..+...+-..+|.||.+++.=..|..|-
T Consensus 5 ~l~~i~~~~~~Ls~~e~~-----------ia~yil~~~~~~~~~si~~lA~~~~vS~sTi~Rf~kklG~~gf~e~k 69 (83)
T d2o3fa1 5 GLAIIQSMKHKLPPSERK-----------LADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGFQDLK 69 (83)
T ss_dssp HHHHHHHHGGGSCHHHHH-----------HHHHHHHCHHHHHTCCHHHHHHHTTCCHHHHHHHHHHTTCSSHHHHH
T ss_pred HHHHHHHHHhhCCHHHHH-----------HHHHHHcCHHHHHHccHHHHHHHHCCCHHHHHHHHHHhCCCCHHHHH
Confidence 466777778888887653 45567788889999999999999999999999999999854444443
No 6
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=19.90 E-value=36 Score=23.58 Aligned_cols=52 Identities=12% Similarity=0.236 Sum_probs=42.8
Q ss_pred CChHHHHHhhhhccCcccchhccccChHHHHHHHHHHHHHHHhHHHHhHhhhhccCC
Q 015574 155 ISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSK 211 (404)
Q Consensus 155 LSd~eI~rLR~evL~SeGV~~LVS~D~~~LL~LA~AEk~eeL~~~A~sVaRLG~rC~ 211 (404)
|.-..|.|+ +++-|+.+ ||+|--+++.=++-+...+|-.-|..+++=++|..
T Consensus 4 LP~a~I~ri----~k~~~~~r-is~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkT 55 (68)
T d1htaa_ 4 LPIAPIGRI----IKNAGAER-VSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKT 55 (68)
T ss_dssp SCHHHHHHH----HHHTTCSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CcHHHHHHH----HHHCCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 445566664 44557776 89999999999999999999999999999888876
No 7
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=18.92 E-value=48 Score=22.86 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=36.8
Q ss_pred ccCcccchhccccChHHHHHHHHHHHHHHHhHHHHhHhhhhccCC
Q 015574 167 VLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSK 211 (404)
Q Consensus 167 vL~SeGV~~LVS~D~~~LL~LA~AEk~eeL~~~A~sVaRLG~rC~ 211 (404)
|++..|+. -||.|--+++.-|+-+..+.|-.-|..++.-++|..
T Consensus 11 I~k~~~~~-ris~ea~~~l~~a~e~Fi~~l~~~a~~~a~~~~RKT 54 (66)
T d1ku5a_ 11 LIRKAGAE-RVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKT 54 (66)
T ss_dssp HHHHTTCS-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSE
T ss_pred HHHhCccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34445665 489999999999999999999999999998877764
No 8
>d1ugoa_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-5, BAG-5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=18.35 E-value=1.3e+02 Score=22.86 Aligned_cols=37 Identities=24% Similarity=0.373 Sum_probs=27.8
Q ss_pred HHHHHHHHHhHHHHhHhhhhccCCCccccchhHHHHH
Q 015574 188 FAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEK 224 (404)
Q Consensus 188 A~AEk~eeL~~~A~sVaRLG~rC~DP~lh~fdr~F~~ 224 (404)
+..+..++++.+...|..|...|.|..+..|+..-..
T Consensus 19 ~I~~i~~ev~~L~~~V~~f~~~~~dke~~~L~E~L~~ 55 (99)
T d1ugoa_ 19 RLQEIQREVKAIEPQVVGFSGLSDDKNYKRLERILTK 55 (99)
T ss_dssp HHHHHHHHHHHSHHHHHTCCCCTTSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 3467788888899999999999998766655554433
No 9
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=17.00 E-value=1.3e+02 Score=23.18 Aligned_cols=49 Identities=10% Similarity=0.267 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhhhh--cccc-----cccHHHHHHHHHHHHHHHHHHHHHhh
Q 015574 290 AILRAELKSQRKQVKILRK--KSLW-----SRSLEEVMEKLVDIVTFLLLEMHDAF 338 (404)
Q Consensus 290 ~~lqqklk~QRq~VK~LKk--~SLW-----srt~D~VVekLvriV~tI~~rI~~VF 338 (404)
+.+++++...+++++.|.+ ...| +++.|+|.+.+-.++-.|+.+....+
T Consensus 131 e~~~~rl~~y~~~~~~l~~~y~~~~~~Id~~~~idev~~~I~~~l~~il~~~~~~~ 186 (189)
T d1zaka1 131 EKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKKNEMV 186 (189)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCCCEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHHHHHHhhhhhhhc
Confidence 4567778888888777755 3566 68999999999999888888877655
No 10
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Probab=13.48 E-value=22 Score=27.41 Aligned_cols=37 Identities=27% Similarity=0.399 Sum_probs=28.2
Q ss_pred hhhhhhhhhhccccccCcchhhHHhhhhcccccCCCCCC
Q 015574 84 AKVSEVSARLGRAGTVGLGKAVDVLDTLGSSMTNLNPNN 122 (404)
Q Consensus 84 ~kv~~~~~~lg~a~~~gl~kav~vldtlgss~~~l~~~~ 122 (404)
.++++.--++| +|.+|+|-| +.+-.+|+.+|=+..++
T Consensus 23 ~~~p~~vvIiG-gG~IG~E~A-~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 23 KEVPGKLLIIG-GGIIGLEMG-TVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CCCCSEEEEES-CSHHHHHHH-HHHHHHTCEEEEECSSS
T ss_pred cccCCeEEEEC-CCHHHHHHH-HHhhcCCCEEEEEEeec
Confidence 34555557788 899999987 89999999988764443
Done!