Citrus Sinensis ID: 015576
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 404 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FIK7 | 415 | Probable acetyl-CoA acety | yes | no | 1.0 | 0.973 | 0.814 | 0.0 | |
| Q8S4Y1 | 403 | Acetyl-CoA acetyltransfer | no | no | 0.985 | 0.987 | 0.812 | 0.0 | |
| Q9UQW6 | 395 | Acetyl-CoA acetyltransfer | yes | no | 0.962 | 0.984 | 0.593 | 1e-129 | |
| Q12598 | 403 | Acetyl-CoA acetyltransfer | N/A | no | 0.960 | 0.962 | 0.548 | 1e-116 | |
| Q04677 | 403 | Acetyl-CoA acetyltransfer | N/A | no | 0.960 | 0.962 | 0.543 | 1e-115 | |
| Q86AD9 | 414 | Probable acetyl-CoA acety | yes | no | 0.957 | 0.934 | 0.538 | 1e-113 | |
| P41338 | 398 | Acetyl-CoA acetyltransfer | yes | no | 0.960 | 0.974 | 0.530 | 1e-111 | |
| Q6NU46 | 420 | Acetyl-CoA acetyltransfer | N/A | no | 0.950 | 0.914 | 0.538 | 1e-106 | |
| Q6GN02 | 420 | Acetyl-CoA acetyltransfer | N/A | no | 0.950 | 0.914 | 0.541 | 1e-106 | |
| P10551 | 398 | Acetyl-CoA acetyltransfer | N/A | no | 0.965 | 0.979 | 0.525 | 1e-106 |
| >sp|Q9FIK7|THIC2_ARATH Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana GN=At5g47720 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/405 (81%), Positives = 373/405 (92%), Gaps = 1/405 (0%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+G FLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPPVSDDSLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+NDI
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDI 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHDT+VDGM+KDGLWDVYNDFGMGVC EICA+++
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYR 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAAQN+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
HPLGCSGARILVTLLGVLR KKGKYGV ICNGGGGASALVLE M
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 9 |
| >sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/399 (81%), Positives = 364/399 (91%), Gaps = 1/399 (0%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
SES+ RDVCIVGVARTPMGGFLGSLSS+ ATKLGS+AI ALKRANV P LVQEV FGN
Sbjct: 5 SESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGN 64
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIPNSV+CTT+NKVC+SGMKAVM+AAQSIQLGIND+VVAGGM
Sbjct: 65 VLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGM 124
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSN PKYLAEARKGSR GHD++VDGMLKDGLWDVYND GMG CAE+CA K ITR++Q
Sbjct: 125 ESMSNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQQ 184
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D YA++SF+RGIAAQ +G F WEI PVE+S GRG+P IVDKDEGL KFDAAKL KLRPS
Sbjct: 185 DDYAVQSFERGIAAQEAGAFTWEIVPVEVSGGRGRPSTIVDKDEGLGKFDAAKLRKLRPS 244
Query: 247 FKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
FKE GG+VTAGNAS ISDGAAALVLVSG KAL+LGL V+AKI+G+ DAAQ PE+FTTAP+
Sbjct: 245 FKENGGTVTAGNASSISDGAAALVLVSGEKALQLGLLVLAKIKGYGDAAQEPEFFTTAPA 304
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
LAIPKAIA+AGLE+SQ+DYYEINEAF+VVA+ANQKLLG+ PE+VN +GGAVSLGHPLGCS
Sbjct: 305 LAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCS 364
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GARIL+TLLG+L+ + GKYGVGG+CNGGGGASALVLEL+
Sbjct: 365 GARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q9UQW6|THIL_SCHPO Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/389 (59%), Positives = 293/389 (75%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V IV RTPMG F GS +S+ ATKLGSIAI+ AL+R N+KP V EVF GNV+SANLG
Sbjct: 5 EVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLG 64
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQ ALGAG+P S+VCTT+NKVC+SGMKA +L AQ+I G +IVVAGG ESMSNAP
Sbjct: 65 QNPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAP 124
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
Y + R G++ G+ +VDG+L+DGL D Y+ MG AE+CA +H+I R QD++AI S
Sbjct: 125 YYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISS 184
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253
+KR AQ + F EI PVE+ GRGKP +V +DE + + KL +R FK G+V
Sbjct: 185 YKRAQNAQATKAFEQEIVPVEVPVGRGKPNKLVTEDEEPKNLNEDKLKSVRAVFKSNGTV 244
Query: 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIA 313
TA NAS ++DGA+ALVL+S K ELGL+ +AKI G+ +AAQ PE FTT+PSLAIPKA+
Sbjct: 245 TAANASTLNDGASALVLMSAAKVKELGLKPLAKIIGWGEAAQDPERFTTSPSLAIPKALK 304
Query: 314 NAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTL 373
+AG+EASQ+DYYEINEAFSVVA+AN K+LGLDPE+VN +GG V++GHPLG SG+RI+ TL
Sbjct: 305 HAGIEASQVDYYEINEAFSVVAVANTKILGLDPERVNINGGGVAMGHPLGSSGSRIICTL 364
Query: 374 LGVLRHKKGKYGVGGICNGGGGASALVLE 402
+L K K GV +CNGGGGAS++V+E
Sbjct: 365 AYILAQKDAKIGVAAVCNGGGGASSIVIE 393
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Catalyzes the formation of acetoacetyl-CoA in the biosynthesis of mevalonate, an intermediate required for the biosynthesis of sterols and nonsterol isoprenoids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q12598|THIA_CANTR Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3 | Back alignment and function description |
|---|
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/390 (54%), Positives = 286/390 (73%), Gaps = 2/390 (0%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECAL-KRANVKPLLVQEVFFGNVLSANLG 73
V IV ARTP+G F GSLSS++ + LG+ A++ AL K +KP V E+ FG VL AN+G
Sbjct: 6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVG 65
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAPARQ AL AG+P+S+V +TINKVC+SGMKAV++ AQ+I G +DIVV GG ESMSN P
Sbjct: 66 QAPARQVALKAGLPDSIVASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTP 125
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
YL AR G+R G +VDG+ KDGL DVY + MGV AE CA H +R++QD++AI S
Sbjct: 126 YYLPSARSGARYGDAIMVDGVQKDGLLDVYEEKLMGVAAEKCAKDHGFSREDQDNFAINS 185
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+K+ A + G F EIAPV + RGKP +++ DE + KF+ +L R F KE G+
Sbjct: 186 YKKAGKALSEGKFKSEIAPVTIKGFRGKPDTVIENDEEIGKFNEERLKSARTVFQKENGT 245
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA NAS ++DG AALVLVS K +LGL+ +AKI G+ +AA+ P FT AP+LA+PKA+
Sbjct: 246 VTAPNASKLNDGGAALVLVSEAKLKQLGLKPLAKISGWGEAARTPFDFTIAPALAVPKAV 305
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL ++D++E+NEAFSVV +AN +L+ + E++N +GGAV++GHPLGCSGARI+VT
Sbjct: 306 KHAGLTVDRVDFFELNEAFSVVGLANAELVNIPLEKLNVYGGAVAMGHPLGCSGARIIVT 365
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
LL VL + G++GV G+CNGGGGASA+V+E
Sbjct: 366 LLSVLTQEGGRFGVAGVCNGGGGASAVVIE 395
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Candida tropicalis (taxid: 5482) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q04677|THIB_CANTR Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3 | Back alignment and function description |
|---|
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/390 (54%), Positives = 285/390 (73%), Gaps = 2/390 (0%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECAL-KRANVKPLLVQEVFFGNVLSANLG 73
V IV ARTP+G F GSLSS++ + LG+ A++ AL K +KP V E+ FG VL AN+G
Sbjct: 6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVG 65
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAPARQ AL AG+P+S++ +TINKVC+SGMKAV++ AQ+I G +DIVV GG ESMSN P
Sbjct: 66 QAPARQVALKAGLPDSIIASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTP 125
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
YL AR G+R G +VDG+ KDGL DVY + MGV AE CA H +R++QD++AI S
Sbjct: 126 YYLPSARSGARYGDAVMVDGVQKDGLLDVYEEKLMGVAAEKCAKDHGFSREDQDNFAINS 185
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+K+ A + G F EIAPV + RGKP +++ DE + KF+ +L R F KE G+
Sbjct: 186 YKKAGKALSEGKFKSEIAPVTIKGFRGKPDTVIENDEEIGKFNEDRLKSARTVFQKENGT 245
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA NAS ++DG AALVLVS K +LGL+ +AKI G+ +AA+ P FT AP+LA+PKA+
Sbjct: 246 VTAPNASKLNDGGAALVLVSEAKLKQLGLKPLAKISGWGEAARTPFDFTIAPALAVPKAV 305
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL ++D++E+NEAFSVV +AN +L+ + E++N +GGAV++GHPLGCSGARI+VT
Sbjct: 306 KHAGLTVDRVDFFELNEAFSVVGLANAELVKIPLEKLNVYGGAVAMGHPLGCSGARIIVT 365
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
LL VL + G++G G+CNGGGGASA+V+E
Sbjct: 366 LLSVLTQEGGRFGAAGVCNGGGGASAIVIE 395
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Candida tropicalis (taxid: 5482) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q86AD9|THIL1_DICDI Probable acetyl-CoA acetyltransferase OS=Dictyostelium discoideum GN=DDB_G0271544 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/388 (53%), Positives = 276/388 (71%), Gaps = 1/388 (0%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
V IV RTP+G GSLS++ TKL SI IE A+KRA +KP V E GNV+SANLGQ
Sbjct: 26 VVIVSAVRTPIGSIGGSLSTIPGTKLSSITIEEAVKRAGIKPSDVDEAIIGNVISANLGQ 85
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
APARQ ALGAG+ + TTINKVCSSGMKA++ AQSI LG + VVAGG ESMS P
Sbjct: 86 APARQCALGAGLEQKTITTTINKVCSSGMKAIVFGAQSIALGHSKTVVAGGFESMSQVPY 145
Query: 135 YLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194
Y + R G++ G+ T +DG+++DGL D YN MGVC + CA+K+ ITR++QD +A+ S+
Sbjct: 146 YADKMRFGAKYGNQTFIDGLVRDGLADAYNGSAMGVCGDDCADKYKITREQQDKFAVDSY 205
Query: 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254
R + AQ +G F EI V + GRG V +DE +K K+ L+P+F G+VT
Sbjct: 206 LRALEAQKNGFFNDEIVQVPI-VGRGGKVTYVVEDEEPKKVLFDKIPNLKPAFTPNGTVT 264
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
NAS ++DGA++++L+S A ELGL+ +A+I G+ADA QAP F TAP+LAIPKA+ N
Sbjct: 265 PANASKLNDGASSVILMSESHAKELGLKPLARIIGYADAEQAPIEFPTAPALAIPKALKN 324
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
AG+ SQ+D +EINEAF+VV +AN K+L +D ++N +GGAV+LGHP+G SG RI+VTL
Sbjct: 325 AGINMSQVDLFEINEAFAVVGLANAKILDIDHNKLNVNGGAVALGHPIGSSGCRIVVTLT 384
Query: 375 GVLRHKKGKYGVGGICNGGGGASALVLE 402
+L++K KYGV ICNGGGG++ALVLE
Sbjct: 385 HLLQNKNLKYGVAAICNGGGGSTALVLE 412
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Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|P41338|THIL_YEAST Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG10 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/398 (53%), Positives = 279/398 (70%), Gaps = 10/398 (2%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLL-----VQEVFFGN 66
+++V IV ARTP+G F GSLSS +A +LG++A++ AL + P L E+ FGN
Sbjct: 2 SQNVYIVSTARTPIGSFQGSLSSKTAVELGAVALKGALAKV---PELDASKDFDEIIFGN 58
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQ AL AG+ N +V +T+NKVC+S MKA++L AQSI+ G D+VVAGG
Sbjct: 59 VLSANLGQAPARQVALAAGLSNHIVASTVNKVCASAMKAIILGAQSIKCGNADVVVAGGC 118
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESM+NAP Y+ AR G++ G +VDG+ +DGL D Y+ MGV AE CA ITR++Q
Sbjct: 119 ESMTNAPYYMPAARAGAKFGQTVLVDGVERDGLNDAYDGLAMGVHAEKCARDWDITREQQ 178
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D++AI S+++ +Q G F EI PV + RGKP V KDE + KL R
Sbjct: 179 DNFAIESYQKSQKSQKEGKFDNEIVPVTIKGFRGKPDTQVTKDEEPARLHVEKLRSARTV 238
Query: 247 F-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
F KE G+VTA NAS I+DGAAA++LVS E L+ +A I+G+ +AA P FT APS
Sbjct: 239 FQKENGTVTAANASPINDGAAAVILVSEKVLKEKNLKPLAIIKGWGEAAHQPADFTWAPS 298
Query: 306 LAIPKAIANAGLEA-SQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC 364
LA+PKA+ +AG+E + +DY+E NEAFSVV + N K+L LDP +VN +GGAV+LGHPLGC
Sbjct: 299 LAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGC 358
Query: 365 SGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
SGAR++VTLL +L+ + GK GV ICNGGGGAS++V+E
Sbjct: 359 SGARVVVTLLSILQQEGGKIGVAAICNGGGGASSIVIE 396
|
Catalyzes the formation of acetoacetyl-CoA in the biosynthesis of mevalonate, an intermediate required for the biosynthesis of sterols and nonsterol isoprenoids. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q6NU46|THILA_XENLA Acetyl-CoA acetyltransferase A, mitochondrial OS=Xenopus laevis GN=acat1-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/390 (53%), Positives = 278/390 (71%), Gaps = 6/390 (1%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V I ARTP+G F G+LSS+ ATKLGSIAI+ A++RA + V+EV+ GNVL A G
Sbjct: 34 EVVIASAARTPIGSFQGTLSSLPATKLGSIAIKAAVERAGIPADEVKEVYMGNVLQAGQG 93
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAP+RQA LGAG+ S TTINKVC+SGMK+VMLAAQS+ G ++VAGGMESMSN P
Sbjct: 94 QAPSRQATLGAGLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVAGGMESMSNVP 153
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
+ +R + G + D ++KDGL DVYN MG CAE A K +I+R+EQDS+AI S
Sbjct: 154 YCM--SRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKFSISREEQDSFAIHS 211
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+ R AA +SGL A EIAPV ++ +GKP IIV +DE ++ D +K KL+ F K+ G+
Sbjct: 212 YTRSKAAWDSGLIANEIAPVTIAQ-KGKPDIIVQEDEEYKRVDFSKFPKLKTVFQKDNGT 270
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA N+S ++DGAAAL+L++ A L + +A+I FADAA P F AP+ A+PK +
Sbjct: 271 VTAANSSTLNDGAAALLLMTTEAANRLNVTPLARIVAFADAAVDPIDFPIAPAYAVPKLL 330
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+ AGL+ I +EINEAFSVV +AN K+LG+DP +VN +GGAVSLGHP+G SGARI+
Sbjct: 331 SEAGLKKEDIAMWEINEAFSVVVLANIKMLGIDPARVNMNGGAVSLGHPIGMSGARIVGH 390
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
+ L KKG++G+ GICNGGGGASA+++E
Sbjct: 391 MAHAL--KKGQFGIAGICNGGGGASAVLIE 418
|
Plays a major role in ketone body metabolism. Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q6GN02|THILB_XENLA Acetyl-CoA acetyltransferase B, mitochondrial OS=Xenopus laevis GN=acat1-b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/390 (54%), Positives = 277/390 (71%), Gaps = 6/390 (1%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V I ARTP+G F G+LSS+ ATKLGSIAI+ A++RA + V+EV+ GNVL A G
Sbjct: 34 EVVIASAARTPIGSFQGTLSSLPATKLGSIAIKAAVERAGIPADEVKEVYMGNVLQAGQG 93
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAP+RQA LGAG+ S TTINKVC+SGMK+VMLAAQS+ G ++VAGGMESMSN P
Sbjct: 94 QAPSRQATLGAGLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVAGGMESMSNVP 153
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
+ +R + G + D ++KDGL DVYN F MG CAE A K +I+R+EQD +AI S
Sbjct: 154 YCM--SRGATPYGGVKLEDIIVKDGLTDVYNKFHMGNCAENTAKKLSISREEQDGFAITS 211
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+ R AA +SGL A EIAPV ++ +GKP IIV +DE ++ D +K KL+ F K+ G+
Sbjct: 212 YTRSKAAWDSGLIANEIAPVTIAQ-KGKPDIIVQEDEEYKRVDFSKFPKLKTVFQKDNGT 270
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA N+S ++DGAAALVL++ A L + +A+I FADAA P F AP+ AIPK +
Sbjct: 271 VTAANSSTLNDGAAALVLMTAEAANRLNVTPLARIVAFADAAVDPIDFPIAPAYAIPKLL 330
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+ AGL+ I +EINEAFSVV +AN K+L +DP +VN +GGAVSLGHP+G SGARI+
Sbjct: 331 SEAGLKKEDIAMWEINEAFSVVVLANIKMLDIDPARVNVNGGAVSLGHPIGMSGARIVGH 390
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
+ LR KG++G+ GICNGGGGASA+++E
Sbjct: 391 MAHALR--KGQFGIAGICNGGGGASAVLIE 418
|
Plays a major role in ketone body metabolism. Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|P10551|THIL_SACBA Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 278/400 (69%), Gaps = 10/400 (2%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLL-----VQEVFFGN 66
+++V IV ARTP+G F GSLSS +A +LG+ A++ AL + P L E+ FGN
Sbjct: 2 SQNVYIVSTARTPIGSFQGSLSSKTAVELGAAALKGALAKV---PELDASKDFDEIIFGN 58
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQ AL AG+ N +V TT+NKVC+S MKA++L AQSI+ G D+VVAGG
Sbjct: 59 VLSANLGQAPARQVALTAGLGNHIVATTVNKVCASAMKAIILGAQSIKCGNADVVVAGGC 118
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESM+NAP Y+ AR G++ G ++DG+ +DGL D Y+ MGV AE CA ITRD+Q
Sbjct: 119 ESMTNAPYYMPAARGGAKFGQTVLIDGVERDGLNDAYDGLAMGVHAEKCARDWDITRDQQ 178
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
DS+AI S+++ +Q G F EI PV + RGKP V DE + KL R
Sbjct: 179 DSFAIESYQKSQQSQKEGKFDNEIVPVTIKGFRGKPDTQVTNDEEPARLHVEKLKSARTV 238
Query: 247 F-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
F +E G+VTA NAS I+DGAAA++LVS E L+ +A ++G+ +AA P FT APS
Sbjct: 239 FQRENGTVTAANASPINDGAAAIILVSERVLKEKNLKPLAIVKGWGEAAHLPADFTWAPS 298
Query: 306 LAIPKAIANAGLEA-SQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC 364
LA+PKA+ +AG+E + +DY+E NEAFSVV + N K+L LDP +VN +GGAV+LGHPLGC
Sbjct: 299 LAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGC 358
Query: 365 SGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
SGAR++VTLL +L+ + GK GV ICNGGGGAS++V+E +
Sbjct: 359 SGARVVVTLLSILQQEGGKIGVAAICNGGGGASSVVIEKL 398
|
Catalyzes the formation of acetoacetyl-CoA in the biosynthesis of mevalonate, an intermediate required for the biosynthesis of sterols and nonsterol isoprenoids. Saccharomyces bayanus (taxid: 4931) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 404 | ||||||
| 255563750 | 402 | acetyl-CoA acetyltransferase, mitochondr | 0.992 | 0.997 | 0.853 | 0.0 | |
| 16417944 | 411 | acetyl Co-A acetyltransferase [Hevea bra | 0.982 | 0.965 | 0.854 | 0.0 | |
| 224089557 | 412 | predicted protein [Populus trichocarpa] | 0.992 | 0.973 | 0.870 | 0.0 | |
| 358347094 | 408 | Acetyl-CoA acetyltransferase cytosolic [ | 0.980 | 0.970 | 0.851 | 0.0 | |
| 356565770 | 409 | PREDICTED: probable acetyl-CoA acetyltra | 0.985 | 0.973 | 0.842 | 0.0 | |
| 297794441 | 415 | hypothetical protein ARALYDRAFT_494196 [ | 1.0 | 0.973 | 0.809 | 0.0 | |
| 15238793 | 415 | putative acetyl-CoA acetyltransferase, c | 1.0 | 0.973 | 0.814 | 0.0 | |
| 30695277 | 405 | putative acetyl-CoA acetyltransferase, c | 1.0 | 0.997 | 0.814 | 0.0 | |
| 356522083 | 400 | PREDICTED: probable acetyl-CoA acetyltra | 0.985 | 0.995 | 0.832 | 0.0 | |
| 53854352 | 414 | peroxisomal acetoacetyl-coenzyme A thiol | 0.985 | 0.961 | 0.829 | 0.0 |
| >gi|255563750|ref|XP_002522876.1| acetyl-CoA acetyltransferase, mitochondrial, putative [Ricinus communis] gi|223537861|gb|EEF39476.1| acetyl-CoA acetyltransferase, mitochondrial, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/402 (85%), Positives = 375/402 (93%), Gaps = 1/402 (0%)
Query: 4 LEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVF 63
+ P++S+K RDVCIVGVARTPMGGFLGSLSS+SATKLGSIAI CAL+RA V P LV+EVF
Sbjct: 1 MAPTDSLKPRDVCIVGVARTPMGGFLGSLSSLSATKLGSIAIHCALERARVDPSLVEEVF 60
Query: 64 FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVA 123
FGNVLSANLGQAPARQAALGAGIPNSV+CTTINKVC+SGMKA MLAAQ+IQ GINDIVVA
Sbjct: 61 FGNVLSANLGQAPARQAALGAGIPNSVICTTINKVCASGMKATMLAAQTIQAGINDIVVA 120
Query: 124 GGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183
GGMESMSNAPKYLAEAR GSRLGHDTI+DGMLKDGLWDVYNDFGMGVCAE+CA++HTITR
Sbjct: 121 GGMESMSNAPKYLAEARNGSRLGHDTIIDGMLKDGLWDVYNDFGMGVCAELCADRHTITR 180
Query: 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243
+EQDSYAIRSF+RGI+AQN GLF+WEI PVE+S GRG+ I+DKDEGL KFDAAKL KL
Sbjct: 181 EEQDSYAIRSFERGISAQNDGLFSWEIVPVEVSGGRGRLSTIIDKDEGLGKFDAAKLRKL 240
Query: 244 RPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
RPSFKE GSVTAGNAS ISDGAAALVLVSG A++LGLQVIA+I+G+ DAAQAPE FTT
Sbjct: 241 RPSFKEKDGSVTAGNASSISDGAAALVLVSGEMAIKLGLQVIARIKGYGDAAQAPELFTT 300
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
AP+LAIPKAI+NAGL+ SQIDYYEINEAFSVVA+ANQKLLGL+PE+VNAHGGAVSLGHPL
Sbjct: 301 APALAIPKAISNAGLDKSQIDYYEINEAFSVVALANQKLLGLNPEKVNAHGGAVSLGHPL 360
Query: 363 GCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GCSGARILVTLLGVLRHK GKYGV GICNGGGGASALVLELM
Sbjct: 361 GCSGARILVTLLGVLRHKNGKYGVAGICNGGGGASALVLELM 402
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|16417944|gb|AAL18924.1|AF429383_1 acetyl Co-A acetyltransferase [Hevea brasiliensis] | Back alignment and taxonomy information |
|---|
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/398 (85%), Positives = 369/398 (92%), Gaps = 1/398 (0%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
S+SI RDVCIVGVARTPMGGFLGSLSS SATKLGSIAI+ ALKRANV P LVQEVFFGN
Sbjct: 5 SDSINPRDVCIVGVARTPMGGFLGSLSSFSATKLGSIAIQAALKRANVDPSLVQEVFFGN 64
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIPNSV+CTTINKVC+SGMKA MLAA +IQ+GINDIVVAGGM
Sbjct: 65 VLSANLGQAPARQAALGAGIPNSVICTTINKVCASGMKATMLAALTIQVGINDIVVAGGM 124
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSNAPKYLAEAR+GSRLGHDTI+DGMLKDGLWDVYNDFGMGVCAEICA++H ITR+E+
Sbjct: 125 ESMSNAPKYLAEARRGSRLGHDTIIDGMLKDGLWDVYNDFGMGVCAEICADQHNITREEK 184
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
DSYAIRSF+RG +AQN G+F+WEI PVE+S GRGK ++VDKDEGL KFDAAKL KLRP
Sbjct: 185 DSYAIRSFERGNSAQNGGVFSWEIVPVEVSGGRGKSVMVVDKDEGLIKFDAAKLRKLRP- 243
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
GSVTAGNASIISDGAAALVLVSG KA+ELGLQVIA+IRG+ DAAQAPE FTTAP+L
Sbjct: 244 ISRIGSVTAGNASIISDGAAALVLVSGEKAIELGLQVIARIRGYGDAAQAPELFTTAPAL 303
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSG 366
AIPKAI+NAGLEASQIDYYEINEAFSVVA+ANQK+LGL+PE++N HGGAVSLGHPLGCSG
Sbjct: 304 AIPKAISNAGLEASQIDYYEINEAFSVVALANQKILGLNPEKLNVHGGAVSLGHPLGCSG 363
Query: 367 ARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
ARILVTLLGVLRHK GKYGV ICNGGGGASALVLELM
Sbjct: 364 ARILVTLLGVLRHKNGKYGVASICNGGGGASALVLELM 401
|
Source: Hevea brasiliensis Species: Hevea brasiliensis Genus: Hevea Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224089557|ref|XP_002308755.1| predicted protein [Populus trichocarpa] gi|222854731|gb|EEE92278.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/402 (87%), Positives = 383/402 (95%), Gaps = 1/402 (0%)
Query: 4 LEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVF 63
+ S+SIK RDVCIVGVARTPMGGFLGSLSS SATKLGSIAI+CAL+RAN+ P LVQEVF
Sbjct: 1 MASSDSIKPRDVCIVGVARTPMGGFLGSLSSFSATKLGSIAIQCALQRANIDPSLVQEVF 60
Query: 64 FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVA 123
FGNVLSANLGQAPARQAALGAGIPNSV+CTTINKVC+SGMKA MLAAQ+IQLGIND+VVA
Sbjct: 61 FGNVLSANLGQAPARQAALGAGIPNSVICTTINKVCASGMKATMLAAQTIQLGINDVVVA 120
Query: 124 GGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183
GGMESMSNAPKYLA+ARKGSRLGHDTIVDGM+KDGLWD+YNDFGMGVCAEICA++H+ITR
Sbjct: 121 GGMESMSNAPKYLADARKGSRLGHDTIVDGMMKDGLWDIYNDFGMGVCAEICADQHSITR 180
Query: 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243
D+QDSYAI+SF+RGIAAQNSG +WE+ PVE+S GRGKPF IVDKD+GL KFDAAKL KL
Sbjct: 181 DDQDSYAIQSFERGIAAQNSGHLSWEVVPVEVSGGRGKPFTIVDKDDGLGKFDAAKLRKL 240
Query: 244 RPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
RPSFKE GGSVTAGNAS ISDGAAALVL+SG KAL+LGLQVIAKIRG+ADAAQAPE FTT
Sbjct: 241 RPSFKENGGSVTAGNASSISDGAAALVLMSGEKALKLGLQVIAKIRGYADAAQAPELFTT 300
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
AP+LAIPKAI+NAGLEASQID+YEINEAFSVVA+ANQKLLGL+P++VNAHGGAVSLGHPL
Sbjct: 301 APALAIPKAISNAGLEASQIDFYEINEAFSVVALANQKLLGLNPQKVNAHGGAVSLGHPL 360
Query: 363 GCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GCSGARILVTLLGVL+HK GKYGVGGICNGGGGASALVLELM
Sbjct: 361 GCSGARILVTLLGVLKHKNGKYGVGGICNGGGGASALVLELM 402
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358347094|ref|XP_003637597.1| Acetyl-CoA acetyltransferase cytosolic [Medicago truncatula] gi|355503532|gb|AES84735.1| Acetyl-CoA acetyltransferase cytosolic [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/397 (85%), Positives = 367/397 (92%), Gaps = 1/397 (0%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
S K+RDVCIVGV RTPMGGFLGSLSS+SAT LGS+AI+ ALKRANV P LVQEVFFGNVL
Sbjct: 2 SSKSRDVCIVGVGRTPMGGFLGSLSSLSATHLGSLAIKAALKRANVDPSLVQEVFFGNVL 61
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
SANLGQAPARQAALGAGIP SV+CTTINKVCSSGMKA MLAAQ+IQLG ND+VV GGMES
Sbjct: 62 SANLGQAPARQAALGAGIPTSVICTTINKVCSSGMKATMLAAQTIQLGSNDVVVVGGMES 121
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MSNAPKY+AEARKGSRLGHDTI+DGMLKDGLWDVYNDFGMGVCAE+CA++H ITRD+QDS
Sbjct: 122 MSNAPKYIAEARKGSRLGHDTIIDGMLKDGLWDVYNDFGMGVCAEMCADQHAITRDQQDS 181
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248
YAI+SF+RGI+AQN G FAWEI PVE+ SGRGKP +VDKDEGL KFDAAKL KL P+FK
Sbjct: 182 YAIQSFERGISAQNGGHFAWEIVPVEIFSGRGKPSTLVDKDEGLGKFDAAKLRKLGPNFK 241
Query: 249 E-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLA 307
+ GG+VTAGNAS ISDGAAALVLVS KA ELGL VIAKI+GFADAAQAPE+FTTAP+LA
Sbjct: 242 KVGGTVTAGNASSISDGAAALVLVSEKKAHELGLHVIAKIKGFADAAQAPEFFTTAPALA 301
Query: 308 IPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367
IPKAI+NAGLEASQIDYYEINEAFS VA+ANQKLLGLDPE++N HGGAVSLGHPLGCSGA
Sbjct: 302 IPKAISNAGLEASQIDYYEINEAFSAVALANQKLLGLDPEKLNVHGGAVSLGHPLGCSGA 361
Query: 368 RILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
RILVTLLGVLRHK GKYGVG ICNGGGGASALV+ELM
Sbjct: 362 RILVTLLGVLRHKGGKYGVGAICNGGGGASALVVELM 398
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565770|ref|XP_003551110.1| PREDICTED: probable acetyl-CoA acetyltransferase, cytosolic 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/399 (84%), Positives = 369/399 (92%), Gaps = 1/399 (0%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
S +K+RDVCIVGVARTP+GG LG+LSS+SAT+LGSIAI+ ALKRANV P LVQEVFFGN
Sbjct: 2 STCVKSRDVCIVGVARTPIGGLLGTLSSLSATELGSIAIKTALKRANVDPSLVQEVFFGN 61
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIP SV+CTTINKVC+SGMKA MLAA +IQ G+ND+VVAGGM
Sbjct: 62 VLSANLGQAPARQAALGAGIPTSVICTTINKVCASGMKATMLAALTIQFGLNDVVVAGGM 121
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSNAPKY+AEARKGSR GHDTI+DGM+KDGLWDVYN+FGMGVCAE+CA++H ITRDEQ
Sbjct: 122 ESMSNAPKYIAEARKGSRYGHDTIIDGMVKDGLWDVYNNFGMGVCAELCADQHVITRDEQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
DSYAIRSF+RGI+AQN+G FAWEI PVE+S+GRG+ IVDKDEGL KFDAAKL KLRPS
Sbjct: 182 DSYAIRSFERGISAQNAGHFAWEIVPVEVSTGRGRASKIVDKDEGLGKFDAAKLRKLRPS 241
Query: 247 FKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
FKE GGSVTAGNAS ISDGAAALVLVS KA ELGL VIAKI+G+ DAA+APE FTTAPS
Sbjct: 242 FKEVGGSVTAGNASSISDGAAALVLVSEEKARELGLHVIAKIKGYGDAAKAPELFTTAPS 301
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
LAIPKAI+NAGL+ASQIDYYEINEAFSVVA+ANQKLLGLDPE+VNAHGGAVSLGHPLGCS
Sbjct: 302 LAIPKAISNAGLDASQIDYYEINEAFSVVALANQKLLGLDPEKVNAHGGAVSLGHPLGCS 361
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GARILVTLLGVLR K+GKYGV ICNGGGGASALVLELM
Sbjct: 362 GARILVTLLGVLRQKRGKYGVAAICNGGGGASALVLELM 400
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297794441|ref|XP_002865105.1| hypothetical protein ARALYDRAFT_494196 [Arabidopsis lyrata subsp. lyrata] gi|297310940|gb|EFH41364.1| hypothetical protein ARALYDRAFT_494196 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/405 (80%), Positives = 373/405 (92%), Gaps = 1/405 (0%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+GGFLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPHVSDDSLQPRDVCVVGVARTPIGGFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+ND+
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDV 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHD++VDGM+KDGLWDVYNDFGMGVC EICA++H
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDSVVDGMMKDGLWDVYNDFGMGVCGEICADQHH 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAA N+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAHNTQLFAWEIVPVEVSTGRGRPLVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKQAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
HPLGCSGARILVTLLGVLR KKGKYGV ICNGGGGASA+VLE M
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASAIVLEFM 405
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15238793|ref|NP_199583.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|186530176|ref|NP_974901.2| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|73919864|sp|Q9FIK7.1|THIC2_ARATH RecName: Full=Probable acetyl-CoA acetyltransferase, cytosolic 2; AltName: Full=Cytosolic acetoacetyl-CoA thiolase 2; Short=Thiolase 2 gi|10177908|dbj|BAB11319.1| acetoacyl-CoA-thiolase [Arabidopsis thaliana] gi|21618008|gb|AAM67058.1| acetoacyl-CoA-thiolase [Arabidopsis thaliana] gi|119935899|gb|ABM06028.1| At5g47720 [Arabidopsis thaliana] gi|222423167|dbj|BAH19561.1| AT5G47720 [Arabidopsis thaliana] gi|332008176|gb|AED95559.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|332008177|gb|AED95560.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/405 (81%), Positives = 373/405 (92%), Gaps = 1/405 (0%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+G FLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPPVSDDSLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+NDI
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDI 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHDT+VDGM+KDGLWDVYNDFGMGVC EICA+++
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYR 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAAQN+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
HPLGCSGARILVTLLGVLR KKGKYGV ICNGGGGASALVLE M
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30695277|ref|NP_851150.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|42573608|ref|NP_974900.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|332008175|gb|AED95558.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|332008178|gb|AED95561.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/405 (81%), Positives = 373/405 (92%), Gaps = 1/405 (0%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+G FLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPPVSDDSLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+NDI
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDI 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHDT+VDGM+KDGLWDVYNDFGMGVC EICA+++
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYR 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAAQN+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
HPLGCSGARILVTLLGVLR KKGKYGV ICNGGGGASALVLE M
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522083|ref|XP_003529679.1| PREDICTED: probable acetyl-CoA acetyltransferase, cytosolic 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/399 (83%), Positives = 366/399 (91%), Gaps = 1/399 (0%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
S S K+RDVCIVGVARTP+GG LG+LSS+SAT+LGSIAI+ AL+RANV P LVQEVFFGN
Sbjct: 2 STSAKSRDVCIVGVARTPIGGLLGTLSSLSATELGSIAIKSALERANVDPSLVQEVFFGN 61
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIP SV+CTTINKVC+SGMKA MLAA +IQ G+ND+VVAGGM
Sbjct: 62 VLSANLGQAPARQAALGAGIPTSVICTTINKVCASGMKATMLAALTIQFGLNDVVVAGGM 121
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSNAPKYLAEARKGSR GHDTI+DGM+KDGLWDVYN+FGMG CAE+CA++H ITRDEQ
Sbjct: 122 ESMSNAPKYLAEARKGSRYGHDTIIDGMVKDGLWDVYNNFGMGACAELCADQHVITRDEQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
DSYAIRSF+RGI+AQN+G FAWEI PVE+S+GRG+ IVDKDEGL KFDAAKL KLRPS
Sbjct: 182 DSYAIRSFERGISAQNAGHFAWEIVPVEVSTGRGRASTIVDKDEGLGKFDAAKLRKLRPS 241
Query: 247 FKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
FKE GGSVTAGNAS ISDGAAALVLVS KA ELGL VIAKI+G+ DAA+APE FTTAPS
Sbjct: 242 FKEVGGSVTAGNASSISDGAAALVLVSEEKARELGLHVIAKIKGYGDAAKAPELFTTAPS 301
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
LAIPKAI+NAGL+ASQIDYYEINEAFSVVA+ANQKLL L+PE+VN +GGAVSLGHPLGCS
Sbjct: 302 LAIPKAISNAGLDASQIDYYEINEAFSVVALANQKLLALNPEKVNVYGGAVSLGHPLGCS 361
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GARILVTLLGVLR K+GKYGV ICNGGGGASALVLELM
Sbjct: 362 GARILVTLLGVLRQKRGKYGVAAICNGGGGASALVLELM 400
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|53854352|gb|AAU95619.1| peroxisomal acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/399 (82%), Positives = 365/399 (91%), Gaps = 1/399 (0%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
++SIK RDVCIVGVARTPMGGFLGSLSS+SAT+LGS+AI ALKRANV P LVQEVFFGN
Sbjct: 6 NDSIKPRDVCIVGVARTPMGGFLGSLSSLSATELGSVAIRAALKRANVDPSLVQEVFFGN 65
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIPNSV+CTTINKVCSSG+KA M+AAQ+IQ G NDIVV GGM
Sbjct: 66 VLSANLGQAPARQAALGAGIPNSVICTTINKVCSSGLKATMIAAQTIQSGSNDIVVTGGM 125
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSN PKYLA+ARKGSRLGHDTIVDGMLKDGLWD YNDFGMGVCAE+CA+++ ITR +Q
Sbjct: 126 ESMSNVPKYLAQARKGSRLGHDTIVDGMLKDGLWDAYNDFGMGVCAELCADQYKITRQQQ 185
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
DSYAI+SF+RGIAAQ SG F WEI PVE+S G G+P VDKDEGL KFDA+KL KLRPS
Sbjct: 186 DSYAIQSFERGIAAQRSGAFVWEIVPVEISGGSGRPSTYVDKDEGLIKFDASKLKKLRPS 245
Query: 247 FKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
FKE GGSVTAGNASIISDGAAALVLVSG KALELGLQVI +IRGFADAAQAPE FTTAP+
Sbjct: 246 FKENGGSVTAGNASIISDGAAALVLVSGQKALELGLQVIGRIRGFADAAQAPELFTTAPA 305
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
LAIPKAI N+GLE+SQIDYYEINEAFSVVA+AN++LL L+ ++NAHGGAVSLGHPLGCS
Sbjct: 306 LAIPKAIKNSGLESSQIDYYEINEAFSVVALANKRLLNLNSGKLNAHGGAVSLGHPLGCS 365
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GARILV+LLGVL+HK GK+GV GICNGGGGASALV+ELM
Sbjct: 366 GARILVSLLGVLKHKNGKFGVAGICNGGGGASALVVELM 404
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 404 | ||||||
| TAIR|locus:2160887 | 415 | AACT1 "AT5G47720" [Arabidopsis | 1.0 | 0.973 | 0.785 | 9.7e-167 | |
| TAIR|locus:2164778 | 403 | ACAT2 "AT5G48230" [Arabidopsis | 0.985 | 0.987 | 0.779 | 1e-162 | |
| UNIPROTKB|G4N745 | 401 | MGG_13499 "Acetyl-CoA acetyltr | 0.960 | 0.967 | 0.580 | 5.2e-113 | |
| POMBASE|SPBC215.09c | 395 | erg10 "acetyl-CoA C-acetyltran | 0.962 | 0.984 | 0.570 | 2.3e-110 | |
| ASPGD|ASPL0000042368 | 399 | AN1409 [Emericella nidulans (t | 0.960 | 0.972 | 0.566 | 3.1e-106 | |
| CGD|CAL0005678 | 402 | ERG10 [Candida albicans (taxid | 0.960 | 0.965 | 0.520 | 1.2e-99 | |
| DICTYBASE|DDB_G0271544 | 414 | acat "acetoacetyl-CoA thiolase | 0.957 | 0.934 | 0.510 | 1.4e-96 | |
| SGD|S000005949 | 398 | ERG10 "Acetyl-CoA C-acetyltran | 0.962 | 0.977 | 0.506 | 2.3e-94 | |
| UNIPROTKB|F1PC58 | 416 | ACAT1 "Uncharacterized protein | 0.950 | 0.923 | 0.5 | 6.3e-92 | |
| UNIPROTKB|J9JHD4 | 433 | ACAT1 "Uncharacterized protein | 0.950 | 0.886 | 0.5 | 6.3e-92 |
| TAIR|locus:2160887 AACT1 "AT5G47720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 318/405 (78%), Positives = 361/405 (89%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+G FLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPPVSDDSLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+NDI
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDI 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHDT+VDGM+KDGLWDVYNDFGMGVC EICA+++
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYR 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAAQN+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXXASALVLELM 404
HPLGCSGARILVTLLGVLR KK ASALVLE M
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405
|
|
| TAIR|locus:2164778 ACAT2 "AT5G48230" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1584 (562.7 bits), Expect = 1.0e-162, P = 1.0e-162
Identities = 311/399 (77%), Positives = 350/399 (87%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
SES+ RDVCIVGVARTPMGGFLGSLSS+ ATKLGS+AI ALKRANV P LVQEV FGN
Sbjct: 5 SESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGN 64
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIPNSV+CTT+NKVC+SGMKAVM+AAQSIQLGIND+VVAGGM
Sbjct: 65 VLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGM 124
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSN PKYLAEARKGSR GHD++VDGMLKDGLWDVYND GMG CAE+CA K ITR++Q
Sbjct: 125 ESMSNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQQ 184
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D YA++SF+RGIAAQ +G F WEI PVE+S GRG+P IVDKDEGL KFDAAKL KLRPS
Sbjct: 185 DDYAVQSFERGIAAQEAGAFTWEIVPVEVSGGRGRPSTIVDKDEGLGKFDAAKLRKLRPS 244
Query: 247 FKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
FKE GG+VTAGNAS ISDGAAALVLVSG KAL+LGL V+AKI+G+ DAAQ PE+FTTAP+
Sbjct: 245 FKENGGTVTAGNASSISDGAAALVLVSGEKALQLGLLVLAKIKGYGDAAQEPEFFTTAPA 304
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
LAIPKAIA+AGLE+SQ+DYYEINEAF+VVA+ANQKLLG+ PE+VN +GGAVSLGHPLGCS
Sbjct: 305 LAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCS 364
Query: 366 GARILVTLLGVLRHKKXXXXXXXXXXXXXXASALVLELM 404
GARIL+TLLG+L+ + ASALVLEL+
Sbjct: 365 GARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403
|
|
| UNIPROTKB|G4N745 MGG_13499 "Acetyl-CoA acetyltransferase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
Identities = 227/391 (58%), Positives = 290/391 (74%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANLG 73
V I VARTP+G FLGSLSS+SAT+LGS AI+ A+ R +KP V+EVFFGNVLSAN+G
Sbjct: 8 VYIAAVARTPVGSFLGSLSSLSATQLGSHAIKSAVSRVPEIKPEDVEEVFFGNVLSANVG 67
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAPARQ A+GAG+ NSV CTT+NKVC+SGMKA++L AQ+I G IVVAGG ESMSN P
Sbjct: 68 QAPARQCAIGAGLSNSVSCTTVNKVCASGMKAIILGAQTIMTGNASIVVAGGTESMSNTP 127
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG-MGVCAEICANKHTITRDEQDSYAIR 192
YLA +R G++ G T++DG+ KDGL D Y MGV AE+C+ H ++R+ QD YAI+
Sbjct: 128 HYLATSRSGTKYGDQTLIDGIQKDGLRDAYGKKELMGVAAELCSVDHELSREAQDEYAIK 187
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE-GG 251
+++ AA +G+F EIAP+E+S GRGKP + VD+DE ++ + KL RP+F+ GG
Sbjct: 188 CYQKAQAATEAGVFKAEIAPIEVSGGRGKPNVTVDRDEEVKNLNIEKLKSARPAFQTTGG 247
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
+VTA NAS I+DGAAA+VLVS K ELG++ +AKI G+ DAA+ PE FTTAP+LAIPKA
Sbjct: 248 TVTAPNASPINDGAAAVVLVSEAKLKELGIKPLAKILGWGDAAREPERFTTAPALAIPKA 307
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
I +AG+E +D+YEINEAFSVVA+AN K+L LDPE VN GG+V++GHPLGCSGARI+
Sbjct: 308 IKHAGIEQKDVDFYEINEAFSVVALANMKILNLDPETVNVFGGSVAIGHPLGCSGARIVT 367
Query: 372 TLLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
TL VL+ KK ASA+V+E
Sbjct: 368 TLTTVLKEKKGKIGCAGICNGGGGASAIVIE 398
|
|
| POMBASE|SPBC215.09c erg10 "acetyl-CoA C-acetyltransferase Erg10 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 1090 (388.8 bits), Expect = 2.3e-110, P = 2.3e-110
Identities = 222/389 (57%), Positives = 283/389 (72%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V IV RTPMG F GS +S+ ATKLGSIAI+ AL+R N+KP V EVF GNV+SANLG
Sbjct: 5 EVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLG 64
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQ ALGAG+P S+VCTT+NKVC+SGMKA +L AQ+I G +IVVAGG ESMSNAP
Sbjct: 65 QNPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAP 124
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
Y + R G++ G+ +VDG+L+DGL D Y+ MG AE+CA +H+I R QD++AI S
Sbjct: 125 YYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISS 184
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253
+KR AQ + F EI PVE+ GRGKP +V +DE + + KL +R FK G+V
Sbjct: 185 YKRAQNAQATKAFEQEIVPVEVPVGRGKPNKLVTEDEEPKNLNEDKLKSVRAVFKSNGTV 244
Query: 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIA 313
TA NAS ++DGA+ALVL+S K ELGL+ +AKI G+ +AAQ PE FTT+PSLAIPKA+
Sbjct: 245 TAANASTLNDGASALVLMSAAKVKELGLKPLAKIIGWGEAAQDPERFTTSPSLAIPKALK 304
Query: 314 NAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTL 373
+AG+EASQ+DYYEINEAFSVVA+AN K+LGLDPE+VN +GG V++GHPLG SG+RI+ TL
Sbjct: 305 HAGIEASQVDYYEINEAFSVVAVANTKILGLDPERVNINGGGVAMGHPLGSSGSRIICTL 364
Query: 374 LGVLRHKKXXXXXXXXXXXXXXASALVLE 402
+L K AS++V+E
Sbjct: 365 AYILAQKDAKIGVAAVCNGGGGASSIVIE 393
|
|
| ASPGD|ASPL0000042368 AN1409 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 221/390 (56%), Positives = 283/390 (72%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVLSANLG 73
V IV ARTP+G FLGSLSS +A +LGS AI+ AL+RA+ +KP VQEVFFGNVLSAN+G
Sbjct: 7 VYIVSYARTPVGSFLGSLSSQTAPQLGSHAIKAALERADGIKPSDVQEVFFGNVLSANVG 66
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQ ALGAG+ S VCTT+NKVC+SG+KAV+L AQ+I G D+VVAGG ESMSN P
Sbjct: 67 QNPARQCALGAGLETSTVCTTVNKVCASGLKAVILGAQTIMTGNADVVVAGGTESMSNTP 126
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
YL R G++ G+ T+VDG++KDGL DV MG+ AE CA H R +QD YAIRS
Sbjct: 127 HYLPNLRTGAKYGNQTMVDGIVKDGLTDVGKQELMGLQAEECAQDHGFNRQQQDDYAIRS 186
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG-GS 252
+++ AAQ +GLF EIAP+++ RGKP + V +D+ + + KL ++P+F G G+
Sbjct: 187 YEKAQAAQAAGLFNDEIAPIDLPGFRGKPGVTVTQDDEPKNLNPDKLRAMKPAFIPGTGT 246
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA N+S ++DGAAA+VLVS K EL L+ +AKI G+ +AAQ P FTTAP+LAIP+A+
Sbjct: 247 VTAPNSSPLNDGAAAVVLVSEAKLKELNLKPVAKILGWGEAAQQPSKFTTAPALAIPRAL 306
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AG+ +D +EINEAFSVVA+AN KLLGL ++VN HGGAV++GHPLG SGARIL T
Sbjct: 307 KHAGVSQDAVDAFEINEAFSVVALANLKLLGLSEDKVNIHGGAVAIGHPLGASGARILTT 366
Query: 373 LLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
LLGVL+ +K ASALV+E
Sbjct: 367 LLGVLKARKGKVGCAGICNGGGGASALVVE 396
|
|
| CGD|CAL0005678 ERG10 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 203/390 (52%), Positives = 274/390 (70%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANLG 73
V IV ARTP+G F G+LSS++ + LG+ A++ AL + +KP V E+ FG VL AN+G
Sbjct: 5 VYIVSTARTPIGSFQGTLSSLTYSDLGAHAVKAALNKVPQIKPEDVDEIVFGGVLQANVG 64
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAPARQ AL AG+ + +V +T+NKVC+SG+KA+++ AQ+I G +DIVV GG ESM+N P
Sbjct: 65 QAPARQVALKAGLTDKIVASTVNKVCASGLKAIIIGAQNIICGTSDIVVVGGAESMTNTP 124
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
YL AR G+R G T++DG+ KDGL DVY MGV AE CA H TR++QD +AI+S
Sbjct: 125 YYLPTARNGARFGDSTLIDGIQKDGLLDVYEQKLMGVAAEKCAADHGFTREQQDEFAIKS 184
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+++ A G F EIAPV + RGKP ++V+KDE +EKF+ AKL R F KE G+
Sbjct: 185 YQKAGNALKQGKFNQEIAPVTIKGVRGKPDVVVEKDEEIEKFNEAKLKSARAVFQKENGT 244
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VT NAS I+DGAAAL+LVS K ELGL+ +AKI G+ +AA+ P FT AP+LA+PKA+
Sbjct: 245 VTGPNASKINDGAAALILVSEAKLKELGLKPLAKINGWGEAARNPIDFTIAPALAVPKAV 304
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL Q+D++E+NEAFSVV +AN ++ + E++NA+GGAV+LGHPLGCSGARI+VT
Sbjct: 305 KHAGLTLDQVDFFELNEAFSVVGLANAEICQIPLEKLNAYGGAVALGHPLGCSGARIVVT 364
Query: 373 LLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
LL VL + AS++V+E
Sbjct: 365 LLSVLIQEGGKIGCAGVCNGGGGASSIVIE 394
|
|
| DICTYBASE|DDB_G0271544 acat "acetoacetyl-CoA thiolase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 198/388 (51%), Positives = 265/388 (68%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
V IV RTP+G GSLS++ TKL SI IE A+KRA +KP V E GNV+SANLGQ
Sbjct: 26 VVIVSAVRTPIGSIGGSLSTIPGTKLSSITIEEAVKRAGIKPSDVDEAIIGNVISANLGQ 85
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
APARQ ALGAG+ + TTINKVCSSGMKA++ AQSI LG + VVAGG ESMS P
Sbjct: 86 APARQCALGAGLEQKTITTTINKVCSSGMKAIVFGAQSIALGHSKTVVAGGFESMSQVPY 145
Query: 135 YLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194
Y + R G++ G+ T +DG+++DGL D YN MGVC + CA+K+ ITR++QD +A+ S+
Sbjct: 146 YADKMRFGAKYGNQTFIDGLVRDGLADAYNGSAMGVCGDDCADKYKITREQQDKFAVDSY 205
Query: 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254
R + AQ +G F EI V + GRG V +DE +K K+ L+P+F G+VT
Sbjct: 206 LRALEAQKNGFFNDEIVQVPIV-GRGGKVTYVVEDEEPKKVLFDKIPNLKPAFTPNGTVT 264
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
NAS ++DGA++++L+S A ELGL+ +A+I G+ADA QAP F TAP+LAIPKA+ N
Sbjct: 265 PANASKLNDGASSVILMSESHAKELGLKPLARIIGYADAEQAPIEFPTAPALAIPKALKN 324
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
AG+ SQ+D +EINEAF+VV +AN K+L +D ++N +GGAV+LGHP+G SG RI+VTL
Sbjct: 325 AGINMSQVDLFEINEAFAVVGLANAKILDIDHNKLNVNGGAVALGHPIGSSGCRIVVTLT 384
Query: 375 GVLRHKKXXXXXXXXXXXXXXASALVLE 402
+L++K ++ALVLE
Sbjct: 385 HLLQNKNLKYGVAAICNGGGGSTALVLE 412
|
|
| SGD|S000005949 ERG10 "Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase)" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 201/397 (50%), Positives = 268/397 (67%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ----EVFFGNV 67
+++V IV ARTP+G F GSLSS +A +LG++A++ AL A V L E+ FGNV
Sbjct: 2 SQNVYIVSTARTPIGSFQGSLSSKTAVELGAVALKGAL--AKVPELDASKDFDEIIFGNV 59
Query: 68 LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
LSANLGQAPARQ AL AG+ N +V +T+NKVC+S MKA++L AQSI+ G D+VVAGG E
Sbjct: 60 LSANLGQAPARQVALAAGLSNHIVASTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCE 119
Query: 128 SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
SM+NAP Y+ AR G++ G +VDG+ +DGL D Y+ MGV AE CA ITR++QD
Sbjct: 120 SMTNAPYYMPAARAGAKFGQTVLVDGVERDGLNDAYDGLAMGVHAEKCARDWDITREQQD 179
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247
++AI S+++ +Q G F EI PV + RGKP V KDE + KL R F
Sbjct: 180 NFAIESYQKSQKSQKEGKFDNEIVPVTIKGFRGKPDTQVTKDEEPARLHVEKLRSARTVF 239
Query: 248 -KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
KE G+VTA NAS I+DGAAA++LVS E L+ +A I+G+ +AA P FT APSL
Sbjct: 240 QKENGTVTAANASPINDGAAAVILVSEKVLKEKNLKPLAIIKGWGEAAHQPADFTWAPSL 299
Query: 307 AIPKAIANAGLE-ASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
A+PKA+ +AG+E + +DY+E NEAFSVV + N K+L LDP +VN +GGAV+LGHPLGCS
Sbjct: 300 AVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCS 359
Query: 366 GARILVTLLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
GAR++VTLL +L+ + AS++V+E
Sbjct: 360 GARVVVTLLSILQQEGGKIGVAAICNGGGGASSIVIE 396
|
|
| UNIPROTKB|F1PC58 ACAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 195/390 (50%), Positives = 269/390 (68%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V IV ARTP+G FLGSLSS+ ATKLGSIAI+ +++A + V+E + GNVL G
Sbjct: 30 EVVIVSAARTPIGSFLGSLSSLPATKLGSIAIQGVIEKAGIPKEEVKEAYMGNVLQGGEG 89
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAP RQAALGAG+P S CTT+NKVC+SGMKA+M+A+QS+ G D++VAGGMESMSN P
Sbjct: 90 QAPTRQAALGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVP 149
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
Y+ +R + G + D ++KDGL DVYN MG CAE A K ITR+EQD+YA+ S
Sbjct: 150 -YVM-SRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKMNITREEQDTYALSS 207
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+ R AA +G F E+ PV +++ +GKP ++V +DE ++ D +K+ KL+ F KE G+
Sbjct: 208 YTRSKAAWEAGRFGSEVIPVTVTT-KGKPDVLVTEDEEYKRVDFSKVPKLKTVFQKENGT 266
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA NAS ++DGAAA+VL++ A L ++ +A++ FADAA P F AP+ A+PK +
Sbjct: 267 VTAANASTLNDGAAAVVLMTADAARRLKVKPLARVAAFADAAVEPIDFPVAPAYAVPKVL 326
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL+ I +E+NEAFS+V +AN K+L LDP++VN +GGAVSLGHP+G SGARI+V
Sbjct: 327 RDAGLKKEDITMWEVNEAFSLVVLANIKMLDLDPQKVNMNGGAVSLGHPIGMSGARIVVH 386
Query: 373 LLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
L+ L K+ ASAL+++
Sbjct: 387 LVHAL--KQGEYGLASICNGGGGASALLIQ 414
|
|
| UNIPROTKB|J9JHD4 ACAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 195/390 (50%), Positives = 269/390 (68%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V IV ARTP+G FLGSLSS+ ATKLGSIAI+ +++A + V+E + GNVL G
Sbjct: 47 EVVIVSAARTPIGSFLGSLSSLPATKLGSIAIQGVIEKAGIPKEEVKEAYMGNVLQGGEG 106
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAP RQAALGAG+P S CTT+NKVC+SGMKA+M+A+QS+ G D++VAGGMESMSN P
Sbjct: 107 QAPTRQAALGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVP 166
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
Y+ +R + G + D ++KDGL DVYN MG CAE A K ITR+EQD+YA+ S
Sbjct: 167 -YVM-SRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKMNITREEQDTYALSS 224
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+ R AA +G F E+ PV +++ +GKP ++V +DE ++ D +K+ KL+ F KE G+
Sbjct: 225 YTRSKAAWEAGRFGSEVIPVTVTT-KGKPDVLVTEDEEYKRVDFSKVPKLKTVFQKENGT 283
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA NAS ++DGAAA+VL++ A L ++ +A++ FADAA P F AP+ A+PK +
Sbjct: 284 VTAANASTLNDGAAAVVLMTADAARRLKVKPLARVAAFADAAVEPIDFPVAPAYAVPKVL 343
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL+ I +E+NEAFS+V +AN K+L LDP++VN +GGAVSLGHP+G SGARI+V
Sbjct: 344 RDAGLKKEDITMWEVNEAFSLVVLANIKMLDLDPQKVNMNGGAVSLGHPIGMSGARIVVH 403
Query: 373 LLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
L+ L K+ ASAL+++
Sbjct: 404 LVHAL--KQGEYGLASICNGGGGASALLIQ 431
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P46707 | FADA4_MYCLE | 2, ., 3, ., 1, ., 9 | 0.4458 | 0.9554 | 0.9821 | yes | no |
| A0R1Y7 | FADA4_MYCS2 | 2, ., 3, ., 1, ., 9 | 0.4559 | 0.9504 | 0.9896 | yes | no |
| P66926 | FADA4_MYCTU | 2, ., 3, ., 1, ., 9 | 0.4496 | 0.9529 | 0.9897 | yes | no |
| Q6GJW4 | THLA_STAAR | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9529 | 0.9796 | yes | no |
| Q5BKN8 | THIL_XENTR | 2, ., 3, ., 1, ., 9 | 0.5410 | 0.9504 | 0.9142 | yes | no |
| P66927 | FADA4_MYCBO | 2, ., 3, ., 1, ., 9 | 0.4496 | 0.9529 | 0.9897 | yes | no |
| P17764 | THIL_RAT | 2, ., 3, ., 1, ., 9 | 0.5205 | 0.9504 | 0.9056 | yes | no |
| Q2YVF5 | THLA_STAAB | 2, ., 3, ., 1, ., 9 | 0.4536 | 0.9529 | 0.9796 | yes | no |
| P45369 | THIL_ALLVD | 2, ., 3, ., 1, ., 9 | 0.4478 | 0.9678 | 0.9923 | yes | no |
| Q8HXY6 | THIL_MACFA | 2, ., 3, ., 1, ., 9 | 0.5012 | 0.9480 | 0.8969 | N/A | no |
| Q6GN02 | THILB_XENLA | 2, ., 3, ., 1, ., 9 | 0.5410 | 0.9504 | 0.9142 | N/A | no |
| P10551 | THIL_SACBA | 2, ., 3, ., 1, ., 9 | 0.525 | 0.9653 | 0.9798 | N/A | no |
| Q8QZT1 | THIL_MOUSE | 2, ., 3, ., 1, ., 9 | 0.5153 | 0.9504 | 0.9056 | yes | no |
| Q99WM3 | THLA_STAAM | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9529 | 0.9796 | yes | no |
| P24752 | THIL_HUMAN | 2, ., 3, ., 1, ., 9 | 0.5063 | 0.9480 | 0.8969 | yes | no |
| Q12598 | THIA_CANTR | 2, ., 3, ., 1, ., 9 | 0.5487 | 0.9603 | 0.9627 | N/A | no |
| Q2G124 | THLA_STAA8 | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9529 | 0.9796 | yes | no |
| Q7A7L2 | THLA_STAAN | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9529 | 0.9796 | yes | no |
| P44873 | ATOB_HAEIN | 2, ., 3, ., 1, ., 9 | 0.4961 | 0.9579 | 0.9847 | yes | no |
| P41338 | THIL_YEAST | 2, ., 3, ., 1, ., 9 | 0.5301 | 0.9603 | 0.9748 | yes | no |
| Q5HS07 | THLA_STAEQ | 2, ., 3, ., 1, ., 9 | 0.4514 | 0.9356 | 0.9593 | yes | no |
| Q6AZA0 | THIL_DANRE | 2, ., 3, ., 1, ., 9 | 0.5282 | 0.9504 | 0.9142 | yes | no |
| Q6GCB8 | THLA_STAAS | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9529 | 0.9796 | yes | no |
| Q8S4Y1 | THIC1_ARATH | 2, ., 3, ., 1, ., 9 | 0.8120 | 0.9851 | 0.9875 | no | no |
| Q6NU46 | THILA_XENLA | 2, ., 3, ., 1, ., 9 | 0.5384 | 0.9504 | 0.9142 | N/A | no |
| P45855 | THL_BACSU | 2, ., 3, ., 1, ., 9 | 0.4311 | 0.9653 | 0.9923 | yes | no |
| Q9UQW6 | THIL_SCHPO | 2, ., 3, ., 1, ., 9 | 0.5938 | 0.9628 | 0.9848 | yes | no |
| Q86AD9 | THIL1_DICDI | 2, ., 3, ., 1, ., 9 | 0.5386 | 0.9579 | 0.9347 | yes | no |
| Q9FIK7 | THIC2_ARATH | 2, ., 3, ., 1, ., 9 | 0.8148 | 1.0 | 0.9734 | yes | no |
| Q04677 | THIB_CANTR | 2, ., 3, ., 1, ., 9 | 0.5435 | 0.9603 | 0.9627 | N/A | no |
| Q8CQN7 | THLA_STAES | 2, ., 3, ., 1, ., 9 | 0.4514 | 0.9356 | 0.9593 | yes | no |
| Q5HIU0 | THLA_STAAC | 2, ., 3, ., 1, ., 9 | 0.4536 | 0.9529 | 0.9796 | yes | no |
| Q8NY95 | THLA_STAAW | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9529 | 0.9796 | yes | no |
| Q29RZ0 | THIL_BOVIN | 2, ., 3, ., 1, ., 9 | 0.5179 | 0.9504 | 0.9099 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1.9 | 0.994 |
| 3rd Layer | 2.3.1 | 0.998 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 404 | |||
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 0.0 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 1e-180 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 1e-167 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 1e-150 | |
| PRK08235 | 393 | PRK08235, PRK08235, acetyl-CoA acetyltransferase; | 1e-137 | |
| PRK06954 | 397 | PRK06954, PRK06954, acetyl-CoA acetyltransferase; | 1e-135 | |
| PRK05656 | 393 | PRK05656, PRK05656, acetyl-CoA acetyltransferase; | 1e-114 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 1e-110 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 1e-105 | |
| PRK06366 | 388 | PRK06366, PRK06366, acetyl-CoA acetyltransferase; | 1e-103 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 1e-103 | |
| PRK06205 | 404 | PRK06205, PRK06205, acetyl-CoA acetyltransferase; | 3e-90 | |
| PRK09050 | 401 | PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; | 8e-88 | |
| PRK06633 | 392 | PRK06633, PRK06633, acetyl-CoA acetyltransferase; | 1e-86 | |
| PRK07661 | 391 | PRK07661, PRK07661, acetyl-CoA acetyltransferase; | 2e-86 | |
| TIGR02430 | 400 | TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | 2e-81 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 2e-81 | |
| PLN02287 | 452 | PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | 9e-80 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 4e-78 | |
| PRK08947 | 387 | PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | 9e-77 | |
| PRK13359 | 400 | PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; | 3e-76 | |
| PRK08131 | 401 | PRK08131, PRK08131, acetyl-CoA acetyltransferase; | 4e-72 | |
| PRK06504 | 390 | PRK06504, PRK06504, acetyl-CoA acetyltransferase; | 2e-71 | |
| PRK07801 | 382 | PRK07801, PRK07801, acetyl-CoA acetyltransferase; | 1e-70 | |
| PRK07108 | 392 | PRK07108, PRK07108, acetyl-CoA acetyltransferase; | 1e-69 | |
| PRK07851 | 406 | PRK07851, PRK07851, acetyl-CoA acetyltransferase; | 2e-69 | |
| PRK08242 | 402 | PRK08242, PRK08242, acetyl-CoA acetyltransferase; | 2e-66 | |
| TIGR02445 | 385 | TIGR02445, fadA, fatty oxidation complex, beta sub | 4e-66 | |
| PRK08170 | 426 | PRK08170, PRK08170, acetyl-CoA acetyltransferase; | 6e-64 | |
| PRK07850 | 387 | PRK07850, PRK07850, acetyl-CoA acetyltransferase; | 7e-61 | |
| PRK06690 | 361 | PRK06690, PRK06690, acetyl-CoA acetyltransferase; | 3e-56 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 1e-55 | |
| cd00826 | 393 | cd00826, nondecarbox_cond_enzymes, nondecarboxylat | 4e-51 | |
| PRK06025 | 417 | PRK06025, PRK06025, acetyl-CoA acetyltransferase; | 2e-47 | |
| pfam02803 | 123 | pfam02803, Thiolase_C, Thiolase, C-terminal domain | 2e-47 | |
| TIGR02446 | 430 | TIGR02446, FadI, fatty oxidation complex, beta sub | 4e-46 | |
| PRK09268 | 427 | PRK09268, PRK09268, acetyl-CoA acetyltransferase; | 1e-36 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 3e-16 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 5e-13 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 1e-09 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-08 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 2e-07 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 6e-07 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 1e-06 | |
| PRK06157 | 398 | PRK06157, PRK06157, acetyl-CoA acetyltransferase; | 1e-06 | |
| PRK12578 | 385 | PRK12578, PRK12578, acetyl-CoA acetyltransferase; | 1e-06 | |
| PRK08256 | 391 | PRK08256, PRK08256, lipid-transfer protein; Provis | 2e-06 | |
| PRK07516 | 389 | PRK07516, PRK07516, acetyl-CoA acetyltransferase; | 7e-06 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 2e-05 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 3e-05 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 1e-04 | |
| PRK07937 | 352 | PRK07937, PRK07937, lipid-transfer protein; Provis | 1e-04 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 2e-04 | |
| PRK06289 | 403 | PRK06289, PRK06289, acetyl-CoA acetyltransferase; | 2e-04 | |
| CHL00203 | 326 | CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein syn | 3e-04 | |
| PTZ00455 | 438 | PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provi | 6e-04 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 740 bits (1913), Expect = 0.0
Identities = 331/393 (84%), Positives = 367/393 (93%), Gaps = 1/393 (0%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
RDVCIVGVARTP+GGFLGSLSS+SAT+LGSIAI+ AL+RA V P LVQEVFFGNVLSANL
Sbjct: 1 RDVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL 60
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQAPARQAALGAG+P S +CTT+NKVC+SGMKAVMLAAQSIQLGIND+VVAGGMESMSNA
Sbjct: 61 GQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNA 120
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
PKYL EARKGSRLGHDT+VDGMLKDGLWDVYNDFGMGVCAE+CA++++I+R+EQD+YAI+
Sbjct: 121 PKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQ 180
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE-GG 251
S++R IAAQ +G FAWEI PVE+ GRG+P +IVDKDEGL KFD AKL KLRPSFKE GG
Sbjct: 181 SYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGG 240
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
SVTAGNAS ISDGAAALVLVSG KALELGLQVIAKIRG+ADAAQAPE FTTAP+LAIPKA
Sbjct: 241 SVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKA 300
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
+ +AGLEASQ+DYYEINEAFSVVA+ANQKLLGLDPE+VN HGGAVSLGHP+GCSGARILV
Sbjct: 301 LKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILV 360
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
TLLGVLR K GKYGV GICNGGGGASA+V+ELM
Sbjct: 361 TLLGVLRSKNGKYGVAGICNGGGGASAIVVELM 393
|
Length = 394 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 507 bits (1307), Expect = e-180
Identities = 207/387 (53%), Positives = 267/387 (68%), Gaps = 4/387 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G F G+L VSA LG+ I+ L+RA + P V +V GNVL A GQ P
Sbjct: 2 IVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNP 61
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
ARQAAL AG+P SV TT+N+VC SG++AV LAAQSI G D+VVAGG+ESMS AP L
Sbjct: 62 ARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLL 121
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
+AR+G RLG +T+ DGML DGL D + MG+ AE A K+ I+R+EQD +A+RS +R
Sbjct: 122 PKARRGGRLGLNTL-DGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQR 180
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGGSVTA 255
AAQ +G F EI PVE+ +G ++VD+DEG KL KL+P+FK+ G+VTA
Sbjct: 181 AAAAQEAGRFKDEIVPVEVPGRKGP--VVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTA 238
Query: 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANA 315
GNAS I+DGAAA++L+S KA ELGL+ +A+I G+A A P P AIPKA+ A
Sbjct: 239 GNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRA 298
Query: 316 GLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLG 375
GL ID EINEAF+ A+A K LGLDPE+VN +GGA++LGHPLG SGARI+VTLL
Sbjct: 299 GLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLH 358
Query: 376 VLRHKKGKYGVGGICNGGGGASALVLE 402
L+ + G+YG+ +C GGG +A+V+E
Sbjct: 359 ELKRRGGRYGLATMCIGGGQGAAMVIE 385
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 473 bits (1219), Expect = e-167
Identities = 201/392 (51%), Positives = 261/392 (66%), Gaps = 4/392 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV ARTP+G F G+L VSA +LG+I I+ AL+RA V P V EV G VL A
Sbjct: 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAAL AG+P V TINKVC SG+KAV LAAQ+I+ G DIVVAGG ESMS A
Sbjct: 62 GQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQA 121
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P L +R G ++G +VD M+ DGL D +N + MG+ AE A ++ ITR+EQD +A+
Sbjct: 122 PHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRPSFKEG 250
S ++ AA +G F EI PV + +G P ++VD DE + D A L KLRP+F +
Sbjct: 182 SQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHP-RPDTTAESLAKLRPAFDKD 239
Query: 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPK 310
G+VTAGNAS I+DGAAA+V++S KA ELGL +A+I +A A P P AI K
Sbjct: 240 GTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRK 299
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARIL 370
A+ AG + +D EINEAF+ A+A +K LGLDPE+VN +GGA++LGHP+G SGARIL
Sbjct: 300 ALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARIL 359
Query: 371 VTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
VTLL ++ + K G+ +C GGG AL++E
Sbjct: 360 VTLLHEMKRRGAKKGLATLCIGGGQGVALIVE 391
|
Length = 393 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 431 bits (1110), Expect = e-150
Identities = 194/388 (50%), Positives = 251/388 (64%), Gaps = 4/388 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV ARTP+G F GSL VSA LG+ I+ L+R + P L+ +V FGNVL A Q
Sbjct: 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNI 60
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
ARQAAL AG+P SV T+N+ C+SG++AV+LAAQ I+ G D+VVAGG+ESMS P +
Sbjct: 61 ARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSV 120
Query: 137 -AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195
R G + G+ + D +LKDGL D N MG+ AE A K+ I+R+EQD YA+RS +
Sbjct: 121 PRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQ 180
Query: 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGGSVT 254
R A GLF EI PV S K ++V DEG+ KL KL+P+F G+VT
Sbjct: 181 RAAKAWEEGLFKDEIVPV--SVKGRKGPVVVSSDEGIRPNTTLEKLAKLKPAFDPNGTVT 238
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
AGN+S ++DGAAAL+L+S KA ELGL +A+I +A A PE P AIPKA+
Sbjct: 239 AGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAIPKALKK 298
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
AGL S ID +EINEAF+ +A K LGLD E+VN +GGA++LGHPLG SGARI+ TLL
Sbjct: 299 AGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLL 358
Query: 375 GVLRHKKGKYGVGGICNGGGGASALVLE 402
L+ + G+YG+ IC GGG A++LE
Sbjct: 359 HELKRRGGRYGLATICIGGGQGIAVILE 386
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 397 bits (1021), Expect = e-137
Identities = 183/388 (47%), Positives = 245/388 (63%), Gaps = 4/388 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV ARTP G F GSL V AT+LG IAI+ AL+RANV V+EV G VL GQ P
Sbjct: 6 IVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIP 65
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
+RQAA AGIP V T+NKVC+SG++AV LA Q I+ G ++VAGGMESMSNAP L
Sbjct: 66 SRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYIL 125
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
AR G R+G + ++D M+ DGL ++ MGV A + I+R+ QD +A RS +R
Sbjct: 126 PGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQR 185
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA--KLMKLRPSFKEGGSVT 254
++A G F EI PV + +G P I+V KDE K D KL KL+P F + G++T
Sbjct: 186 AVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRK-DTTIEKLAKLKPVFDKTGTIT 243
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
AGNA ++DGAAALVL+S +A + G + +A I A + F P AI +
Sbjct: 244 AGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEK 303
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
G ID +EINEAF+ VA+A+ ++ G+DPE+VN +GGAV+LGHP+G SGARI+VTL+
Sbjct: 304 TGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLI 363
Query: 375 GVLRHKKGKYGVGGICNGGGGASALVLE 402
L+ + G G+ IC+GGG A+++E
Sbjct: 364 HELKRRGGGIGIAAICSGGGQGDAVLIE 391
|
Length = 393 |
| >gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 391 bits (1007), Expect = e-135
Identities = 198/398 (49%), Positives = 263/398 (66%), Gaps = 5/398 (1%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
++ + I ARTPM F G +S++A +LG+ AI A++RA +KP + EV G VL
Sbjct: 3 AVDQDPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVL 62
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
A GQAPARQAALGAG+P SV CTT+NK+C SGM+A M A + G D++VAGGMES
Sbjct: 63 PAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMES 122
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG--MGVCAEICANKHTITRDEQ 186
M+NAP L +AR G R+GH ++D M DGL D Y D G MG AE CA ++ TR+ Q
Sbjct: 123 MTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAY-DKGRLMGTFAEECAGEYGFTREAQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D++AI S R A G FAWEIAPV ++ +G ++D+DE K + K+ L+P+
Sbjct: 182 DAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGD--TVIDRDEQPFKANPEKIPTLKPA 239
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
F + G+VTA N+S ISDGAAALV++ A LGL +A++ G + AQAP FTTAP
Sbjct: 240 FSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVG 299
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSG 366
AI K G A+++D +EINEAF+VV +A K GL E+VN +GGA +LGHP+G SG
Sbjct: 300 AIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASG 359
Query: 367 ARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
ARILVTL+G LR + GK GV +C GGG A+A+ +EL+
Sbjct: 360 ARILVTLIGALRARGGKRGVASLCIGGGEATAMGIELI 397
|
Length = 397 |
| >gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 339 bits (872), Expect = e-114
Identities = 174/390 (44%), Positives = 249/390 (63%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RT +G F GSL+++ A +LG+ I L++ + P V EV G VL+A
Sbjct: 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAA+ AG+P+SV T+NKVC SG+KA+ LAAQ+I+ G ++++AGG E+MS A
Sbjct: 62 GQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLA 121
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P L AR G R+GH +VD M+ DGLWD +ND+ MG+ AE K+ I+R+ QD++A
Sbjct: 122 PYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGS 252
S ++ +AA +G F EI P+ + +G+P ++ A L KL+P+FK+ GS
Sbjct: 182 SQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGS 241
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTAGNAS ++DGAAA++L+S KA LGL V+AKI +A+A P P A + +
Sbjct: 242 VTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCL 301
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
AG +++D E NEAF+ ++A K LG D +VN +GGA++LGHP+G SG R+LVT
Sbjct: 302 DKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVT 361
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
LL + + K G+ +C GGG AL +E
Sbjct: 362 LLHEMIRRDAKKGLATLCIGGGQGVALAIE 391
|
Length = 393 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 323 bits (831), Expect = e-110
Identities = 150/261 (57%), Positives = 187/261 (71%), Gaps = 3/261 (1%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
DV IV ARTP+G F GSL +SA LG+IAI+ AL+RA VKP V EV GNVL A G
Sbjct: 1 DVVIVSAARTPIGSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEG 60
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQAAL AGIP+SV TINKVC SG+KAV LAAQ+I+ G DIVVAGG+ESMSNAP
Sbjct: 61 QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSNAP 120
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
L +R G+R+G +VD MLKDGL D +N MG+ AE A K+ I+R+EQD +A+RS
Sbjct: 121 YVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFALRS 180
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF-KEGG 251
++ AAQ +G F EI PV + +GKP ++VDKDEG+ L KL+P+F KE G
Sbjct: 181 QQKAAAAQKAGKFKDEIVPVTIKGRKGKP-LVVDKDEGIRPGTTLESLAKLKPAFDKENG 239
Query: 252 SVTAGNASIISDGAAALVLVS 272
+VTAGNAS ++DGAAA++L+S
Sbjct: 240 TVTAGNASGLNDGAAAVLLMS 260
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 315 bits (808), Expect = e-105
Identities = 175/405 (43%), Positives = 234/405 (57%), Gaps = 31/405 (7%)
Query: 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKR--ANVKPLLVQEVFFGNVLS 69
RDV IVG RTP G F GSL+ ++A LG+ I+ L+R A+V V +V G VL
Sbjct: 2 RDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQ 61
Query: 70 A-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
A GQ ARQAAL AG+P SV T+N+ C+SG+ AV LAAQ+I G D+V+AGG+E
Sbjct: 62 AGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEK 121
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MS+AP R+G R+ D+ VD M +D L D + MG+ AE A ++ I+R++QD
Sbjct: 122 MSDAPMG----REGVRVL-DSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDE 176
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKLR 244
A++S K A +G F EI P ++ + V D + D + L
Sbjct: 177 VAVKSHKNAAANPKAGFF-DEITPEDVLNSP------VVADPLR-RLDCSPTSDGAAALV 228
Query: 245 PSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTA 303
P+F+E GG+VTAGNAS I+DGAAAL+L+S KA ELGL +A IR +A A P
Sbjct: 229 PAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DG 287
Query: 304 PSLAIPKAIANAGLEA-SQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
P A+ A+ AGL A + E EAF+ VA+ K+LG P VN GGA++LGHP+
Sbjct: 288 PVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDLP--VNPSGGAIALGHPI 345
Query: 363 GCSGARILVTLLGVLRHK----KGKYGVGGICNGGGG-ASALVLE 402
G +GARILV L LR + + G+ +C GGGG A VLE
Sbjct: 346 GATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVAAVLE 390
|
Length = 392 |
| >gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 311 bits (797), Expect = e-103
Identities = 175/399 (43%), Positives = 239/399 (59%), Gaps = 20/399 (5%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RT +G F S S + A +LG AI+ + A + P LVQEV GNV+ A +
Sbjct: 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PA QAA AG+P V T+N VC+SGM AV AA+ I LG D+V+AGGME+MSNA
Sbjct: 62 GQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNA 121
Query: 133 PKYL-AEARKGSR-LGHDT--IVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
P L ++ R G + L H I D ML DGL D + MGV AE A K+ ITR+ D
Sbjct: 122 PFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADE 181
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248
Y+++S++R I A SG F EI P +D+DEG+ K L KL P+F
Sbjct: 182 YSVQSYERAIRATESGEFRNEIVPFND----------LDRDEGIRKTTMEDLAKLPPAFD 231
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
+ G +TAGN++ +SDG +ALV+ S E GL+ IA+I G+ A+ P F AP A
Sbjct: 232 KNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPAT 291
Query: 309 PKAIANAGLEASQIDYYEI---NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
K + IDYY++ NEAFS+ +I + L +D E+ N +GGAV++GHP+G S
Sbjct: 292 RKLLEKQN---KSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNS 348
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
G+RI+VTL+ L+ + K G+ +C+GGGGA L LE++
Sbjct: 349 GSRIIVTLINALKTRHMKTGLATLCHGGGGAHTLTLEMV 387
|
Length = 388 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 309 bits (795), Expect = e-103
Identities = 163/394 (41%), Positives = 229/394 (58%), Gaps = 6/394 (1%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN 71
R+V +V RT +G F GSL V+ T LG+ + AL RA V P V V FG+V+
Sbjct: 2 MREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTE 61
Query: 72 LGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
+R AA+ AG+P +N++C SG++A++ AAQ+I LG D+ + GG ESMS
Sbjct: 62 PRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMS 121
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
AP L AR G+R+G +VD M+ L D + MGV AE A K+ I+R+ QD+ A
Sbjct: 122 RAPYLLPAARWGARMGDAKLVDMMVG-ALHDPFGTIHMGVTAENVAAKYGISREAQDALA 180
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMKLRPSF-K 248
+ S +R AA +G F +I PVE+ + +G+ ++ D DE + L KL+P F K
Sbjct: 181 LESHRRAAAAIAAGYFKDQIVPVEIKTRKGE--VVFDTDEHVRADTTLEDLAKLKPVFKK 238
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
E G+VTAGNAS I+DGAAA+VL A GL+ +A++ G+A A PE+ P A
Sbjct: 239 ENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPAT 298
Query: 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR 368
KA+ AGL + +D E NEAF+ A A + LGLDP +VN +G +SLGHP+G +GA
Sbjct: 299 QKALERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAI 358
Query: 369 ILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
I V L L+ G+Y + +C GGG A + E
Sbjct: 359 ITVKALYELQRIGGRYALVTMCIGGGQGIAAIFE 392
|
Length = 394 |
| >gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 277 bits (711), Expect = 3e-90
Identities = 158/405 (39%), Positives = 221/405 (54%), Gaps = 20/405 (4%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
RD I RTP+G F G+ V A +L + I ++R + P + +V FG N
Sbjct: 2 RDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQG-YPN- 59
Query: 73 GQAPA--RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G+APA R AAL AG+P +V +++ C SG++AV+ AA +Q G D+V+AGG ESMS
Sbjct: 60 GEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMS 119
Query: 131 NAPKYLAEARKGSRLG----HDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
N Y + R G R G HD + G G GM AE ++ I+R+EQ
Sbjct: 120 NVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQ 179
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG------LEKFDAAKL 240
D+ A+RS +R +AAQ +G F EI PV + +G P +VD+DE LE AKL
Sbjct: 180 DALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-TVVDRDEHPRADTTLESL--AKL 236
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
+ +VTAGNAS +D AAA ++ + KA ELGL+ +A++ +A A P
Sbjct: 237 RPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRM 296
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQVNAHGGAVS 357
P A KA+A AGL ID E+NEAF+ +A K G D E++N +G +S
Sbjct: 297 GIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGIS 356
Query: 358 LGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
LGHP+G +G RIL TLL L+ ++ +YG+ +C GGG A V E
Sbjct: 357 LGHPVGATGGRILATLLRELQRRQARYGLETMCIGGGQGLAAVFE 401
|
Length = 404 |
| >gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 8e-88
Identities = 165/413 (39%), Positives = 231/413 (55%), Gaps = 38/413 (9%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN 71
+ I RTP+G + G+LSSV A LG++ ++ + R V V +V +G AN
Sbjct: 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYG---CAN 58
Query: 72 LGQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
QA AR +AL AG+P SV TTIN++C SGM AV AA++I+ G ++++AGG
Sbjct: 59 --QAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGG 116
Query: 126 MESMSNAPKYLAEARKG-SRLG--HDT-----IVDGMLKDGLWDVYNDFGMGVCAEICAN 177
+ESMS AP + +A SR DT V+ ++K Y M AE A
Sbjct: 117 VESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKA----QYGVDSMPETAENVAE 172
Query: 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDE------G 231
+ I+R +QD++A+RS +R AAQ +G A EI PV + +G P ++VD+DE
Sbjct: 173 DYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETT 231
Query: 232 LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA 291
LE L KL+P F+ G+VTAGNAS ++DGAAAL+L S A + GL A+I G A
Sbjct: 232 LEA-----LAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMA 286
Query: 292 DAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQV 349
A P P+ A K +A GL Q D E+NEAF+ +A + LGL D +V
Sbjct: 287 TAGVEPRIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARV 346
Query: 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
N +GGA++LGHPLG SGAR+++T L L G+Y + +C G G AL +E
Sbjct: 347 NPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALCTMCIGVGQGIALAIE 399
|
Length = 401 |
| >gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 268 bits (686), Expect = 1e-86
Identities = 160/391 (40%), Positives = 234/391 (59%), Gaps = 4/391 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ V I RT G F+GSLS+ A L + I+ L+ + + P LV EV G V++
Sbjct: 3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS 62
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQ + AGIP V TINKVC SG+K+V LAA SI G N+IV+AGG E+MS
Sbjct: 63 GQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
+ + R G++ G +VD M DGL DV++ MG+ AE + + I+R EQD +A+
Sbjct: 123 -MHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALS 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM-KLRPSFKEGG 251
S K+ AQ +G+F EI P+E++ + + D DE + + +++ KLRP+F + G
Sbjct: 182 SHKKAAKAQLAGIFKDEILPIEVTIKKTTS--LFDHDETVRPDTSLEILSKLRPAFDKNG 239
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
VTAGNAS I+DGAA L++VS + L +A+I +A A P TAP A KA
Sbjct: 240 VVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKA 299
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
++ AG + ++ E+NEAF+ +I + + D E+VN +GGA+++GHP+G SG R+L+
Sbjct: 300 LSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLI 359
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
TL+ LR K K G+ +C GGG A+ +E
Sbjct: 360 TLIHGLRRAKAKKGLVTLCIGGGMGMAMCVE 390
|
Length = 392 |
| >gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 267 bits (685), Expect = 2e-86
Identities = 159/402 (39%), Positives = 231/402 (57%), Gaps = 22/402 (5%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL-SA 70
R+ IV ARTP+G GSL +V LG++ ++ LKRA + ++ G + A
Sbjct: 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEA 61
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AG+P +V TIN+ CSSG++++ A+ I LG ++ V+AGG ESMS
Sbjct: 62 EQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMS 121
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
P +GH + L + + Y GMG AE A K+ I+R++QD++A
Sbjct: 122 LVPM----------MGHVVRPNPRLVEAAPEYY--MGMGHTAEQVAVKYGISREDQDAFA 169
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGR----GKPF---IIVDKDEGLE-KFDAAKLMK 242
+RS +R A G FA EI PV+++ K I +DEG+ L K
Sbjct: 170 VRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGK 229
Query: 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
LRP+F GSVTAGN+S +SDGAAA++L+ KA GL+ +AK R FA A PE
Sbjct: 230 LRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGI 289
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
P AIPKA+ AGLE S I +E+NEAF+ +I + LGLD E+VN +GGA++LGHPL
Sbjct: 290 GPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPL 349
Query: 363 GCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GC+GA++ ++L+ ++ + ++G+ +C GGG +A V EL+
Sbjct: 350 GCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGMGAAGVFELL 391
|
Length = 391 |
| >gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 255 bits (653), Expect = 2e-81
Identities = 160/404 (39%), Positives = 230/404 (56%), Gaps = 20/404 (4%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN 71
R+ I RTP+G + GSLSSV A L ++ I+ L R + + +V +G AN
Sbjct: 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYG---CAN 57
Query: 72 LGQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
QA AR AAL AG+P SV TT+N++C SG+ A+ +AA++I+ G D+++AGG
Sbjct: 58 --QAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGG 115
Query: 126 MESMSNAPKYLAEAR----KGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181
+ESMS AP + +A + +++ TI + + +Y M AE A + I
Sbjct: 116 VESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGI 175
Query: 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAK-L 240
+R++QD++A+RS +R AAQ SG FA EI PV + +G+P +VD+DE + L
Sbjct: 176 SREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEP-TVVDQDEHPRPETTLEGL 234
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
KL+P + G+VTAGNAS ++DGAAAL+L S GL A+I A A P
Sbjct: 235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIM 294
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSL 358
P A K +A AGL Q D E+NEAF+ A+A + LGL D +VN +GGA++L
Sbjct: 295 GIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIAL 354
Query: 359 GHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
GHPLG SGAR+++T L L G+Y + +C G G AL +E
Sbjct: 355 GHPLGASGARLVLTALRQLERSGGRYALCTMCIGVGQGIALAIE 398
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 255 bits (652), Expect = 2e-81
Identities = 137/402 (34%), Positives = 205/402 (50%), Gaps = 23/402 (5%)
Query: 13 RDVCIVGVARTPMGGFLGS------LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
DV +V ART F +++ +L ++ I +++ +KP + ++ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
L R A +P ++ +++ C+S + V + A I G+ DIV+AGG
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDG---LWDVYNDFGMGVCAEICANKHTIT 182
+E M+ P H +L D +D+ + MG+ AE A + I
Sbjct: 122 VEHMTRTPMGDNP--------HIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIK 173
Query: 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA--KL 240
R+E D +++RS + A G F EI P+E+ K +VD D+ + D + KL
Sbjct: 174 REEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKK--KVVDVDQSVRP-DTSLEKL 230
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
KL P+FK G +TAGN+S ++ GA+ ++L+S + GL+ +AKIR F A P
Sbjct: 231 AKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIM 290
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGH 360
P A KA+ AGL ID +EINEAF+VV + K LGLDPE VN GGA+++GH
Sbjct: 291 GKGPVPASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGH 350
Query: 361 PLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
PLG +GARI+ TL L+ K YGV +C GGG A+VLE
Sbjct: 351 PLGATGARIVGTLARQLQIKGKDYGVATLCVGGGQGGAVVLE 392
|
Length = 394 |
| >gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 9e-80
Identities = 149/405 (36%), Positives = 218/405 (53%), Gaps = 30/405 (7%)
Query: 12 ARDVCIVGVARTPM-----GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
DV IV RTP+ GGF + L + ++ +++ + P V ++ G
Sbjct: 45 GDDVVIVAAYRTPICKAKRGGFKDTY----PDDLLAPVLKAVVEKTGLNPSEVGDIVVGT 100
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
VL+ +A R AA AG P +V T+N+ CSSG++AV A +I+ G DI + G
Sbjct: 101 VLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 160
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+ESM+ P E R+ + +D L MG+ +E A + +TR+E
Sbjct: 161 VESMTTNPMAW-EGGVNPRVESFS----QAQDCL------LPMGITSENVAERFGVTREE 209
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPV-----EMSSGRGKPFIIVDKDEGL-EKFDAAK 239
QD A+ S ++ AA SG F EI PV + +G KP I++ D+G+ A
Sbjct: 210 QDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKP-IVISVDDGIRPNTTLAD 268
Query: 240 LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
L KL+P FK+ G+ TAGN+S +SDGA A++L+ A++ GL ++ R FA P
Sbjct: 269 LAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAV 328
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
P++AIP A+ AGLE ID +EINEAF+ + K LGLDPE+VN +GGA++LG
Sbjct: 329 MGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALG 388
Query: 360 HPLGCSGARILVTLLGVL--RHKKGKYGVGGICNGGGGASALVLE 402
HPLG +GAR + TLL + R K ++GV +C G G +A V E
Sbjct: 389 HPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFE 433
|
Length = 452 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 246 bits (630), Expect = 4e-78
Identities = 148/404 (36%), Positives = 223/404 (55%), Gaps = 24/404 (5%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVL-SA 70
D IV RTP+G G + L + + A+ + + P L+++ G + A
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AL AG+PNSV T+N+ C+SG++AV +AA I++G D+++A G+ESMS
Sbjct: 67 EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMS 126
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
P +G+ + + +V +GMG+ AE A + ++R++QD++A
Sbjct: 127 MVPM----------MGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFA 176
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGR-----GKPFI---IVDKDEGLEKFDAAK-LM 241
+ S ++ IAAQ +G F EI P E++ G+ + VD DEG + + L
Sbjct: 177 LESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLA 236
Query: 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKAL-ELGLQVIAKIRGFADAAQAPEWF 300
KL+P F GSVTAGN+S SDGA A++LVS KAL + L +A+ FA A PE
Sbjct: 237 KLKPVFANKGSVTAGNSSQTSDGAGAVILVSE-KALKQFNLTPLARFVSFAVAGVPPEIM 295
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGH 360
P AIP A+ AGL+ +D+ E+NEAF+ ++A + LGLDP +VN GGA++LGH
Sbjct: 296 GIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGH 355
Query: 361 PLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
PLG +GA T++ LR KYG+ +C G G +A + E +
Sbjct: 356 PLGATGAIRTATVVHGLRRTNLKYGMVTMCVGTGMGAAGIFERL 399
|
Length = 399 |
| >gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 242 bits (620), Expect = 9e-77
Identities = 154/413 (37%), Positives = 216/413 (52%), Gaps = 52/413 (12%)
Query: 13 RDVCIVGVARTPMG---GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVL 68
DV IV RTPMG G G+ +V A L + + L R + P + ++ +G V
Sbjct: 2 EDVVIVDAIRTPMGRSKG--GAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCV- 58
Query: 69 SANLGQA--PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
L Q AR AAL AGIP+SV T+N++C S M+A+ AA++I G D+ + GG+
Sbjct: 59 QQTLEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGV 118
Query: 127 ESMSNAP------------KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174
E M + P K +A+A GM MG+ AE+
Sbjct: 119 EHMGHVPMNHGVDFHPGLSKNVAKA------------AGM-------------MGLTAEM 153
Query: 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-E 233
H I+R++QD++A RS +R AA G F EI P E G + D DE +
Sbjct: 154 LGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGV-LKLFDYDEVIRP 212
Query: 234 KFDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFAD 292
+ L LRP+F G+VTAG +S +SDGA+A++++S +A ELGL+ A+IR A
Sbjct: 213 ETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAV 272
Query: 293 AAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQV 349
A P P A KA+ AGL S ID +E+NEAF+ ++ K LGL E+V
Sbjct: 273 AGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKV 332
Query: 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
N +GGA++LGHPLGCSGARI TLL ++ K ++G+ +C G G A V E
Sbjct: 333 NLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIGLGQGIATVFE 385
|
Length = 387 |
| >gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 241 bits (618), Expect = 3e-76
Identities = 146/406 (35%), Positives = 226/406 (55%), Gaps = 27/406 (6%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL 72
+ I RTP+G + G+LSSV A LG++ ++ ++R +V + +V +G AN
Sbjct: 3 EAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYG---CAN- 58
Query: 73 GQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
QA AR + L AG+P+ V +TIN++C SGM AV +AA++I+ G +++AGG+
Sbjct: 59 -QAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGV 117
Query: 127 ESMSNAPKYLAEAR----KGSRLGHDTI----VDGMLKDGLWDVYNDFGMGVCAEICANK 178
ESMS AP + +A + + + TI V+ ++K +Y M AE A
Sbjct: 118 ESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQ----LYGVDSMPETAENVATD 173
Query: 179 HTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA 238
+ ++R +QD++A+RS ++ AQ G A EI PV + +G P ++V +DE +
Sbjct: 174 YNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLE 232
Query: 239 KLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
L KL+ + G+VTAGNAS ++DGA AL+L S A GL+ A++ G A A P
Sbjct: 233 ALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPR 292
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAV 356
P+ A K +A G+ Q D E+NEAF+ +A + LGL D +VN +GGA+
Sbjct: 293 VMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAI 352
Query: 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
+LGHPLG SGAR++ T L L G++ + +C G G A+ +E
Sbjct: 353 ALGHPLGASGARLVTTALYQLERTGGRFALCTMCIGVGQGIAIAIE 398
|
Length = 400 |
| >gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 230 bits (589), Expect = 4e-72
Identities = 145/402 (36%), Positives = 213/402 (52%), Gaps = 35/402 (8%)
Query: 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-----NLGQAP 76
R+P G G+L+SV L + I L+++ +++V G A N+
Sbjct: 11 RSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNV---- 66
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
AR A L AG+P +V T+N++C+SG+ AV+ AA++I G D+ +AGG+ESMS AP +
Sbjct: 67 ARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVM 126
Query: 137 AEARK-------------GSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183
+A G+R + IV Y + M + A + I+R
Sbjct: 127 GKAESAFSRDAKVFDTTIGARFPNPKIVAQ---------YGNDSMPETGDNVAAEFGISR 177
Query: 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMK 242
++ D +A +S + AA+ G FA EI P+E+ GR P +V +DE L K
Sbjct: 178 EDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTK 237
Query: 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
L+P F EGG VTAGNAS I+DGAAAL++ S + GL+ +A+I A A P
Sbjct: 238 LKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGI 296
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSLGH 360
P AI KA+A AGL +D EINEAF+ + K LG+ D +VN +GGA+++GH
Sbjct: 297 GPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGH 356
Query: 361 PLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
PLG SGAR+ +T L+ + +Y V +C G G A+V+E
Sbjct: 357 PLGASGARLALTAARELQRRGKRYAVVSLCIGVGQGLAMVIE 398
|
Length = 401 |
| >gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 228 bits (584), Expect = 2e-71
Identities = 139/398 (34%), Positives = 216/398 (54%), Gaps = 27/398 (6%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-NLGQA 75
IV ART G G L+ L + ++ + R+ P L+++V G V
Sbjct: 6 IVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATN 65
Query: 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 135
AR A L + +P SV T+I++ C S +A+ AAQ++ G DIV+A G+ESM+ P
Sbjct: 66 VARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMG 125
Query: 136 LAE---ARKGSRLGHDTIVDGMLKDGLWDVYND--FGMGVCAEICANKHTITRDEQDSYA 190
A+ G LGH G+ + Y F AE+ A K+ +++D+ D +A
Sbjct: 126 SPSTLPAKNG--LGH------YKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFA 177
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKLRPS 246
++S +R IAA +G F EI P+E++ G + DEG+ +FDA +KL
Sbjct: 178 LQSHQRAIAATQAGKFKAEIVPLEITRADGSG-EMHTVDEGI-RFDATLEGIAGVKL--- 232
Query: 247 FKEGGSVTAGNASIISDGAAALVLVS--GVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
EGG +TA AS I DGA+ +++V+ G+KAL G++ +A+I P AP
Sbjct: 233 IAEGGRLTAATASQICDGASGVMVVNERGLKAL--GVKPLARIHHMTVIGGDPVIMLEAP 290
Query: 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC 364
A +A+ AG++ ID YE+NEAF+ V +A K G DPE++N +GGA++LGHPLG
Sbjct: 291 LPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGA 350
Query: 365 SGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
SG +++ TL+ L+ + +YG+ +C GGG A+ ++E
Sbjct: 351 SGTKLMTTLVHALKQRGKRYGLQTMCEGGGMANVTIVE 388
|
Length = 390 |
| >gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 1e-70
Identities = 143/391 (36%), Positives = 204/391 (52%), Gaps = 21/391 (5%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G G L+ V LG+ ++ + R + P V +V FG V QA
Sbjct: 6 IVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCV-DTIGPQAG 64
Query: 77 --ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
AR + L AG+P V T+++ C S +A+ AAQ++ G D+VVAGG+++MS P
Sbjct: 65 NIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIP- 123
Query: 135 YLAEARK-GSRLGHDTIVDGMLKDGLWDVYNDFGMG--VCAEICANKHTITRDEQDSYAI 191
++ A G +LG + G Y D + AE+ A K I+R+E + +A+
Sbjct: 124 -ISSAMTAGEQLGFTSPFAE--SKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFAL 180
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGG 251
S +R AA +G F EI PV V DEG + K+ L+P EGG
Sbjct: 181 ESHRRAFAAIRAGRFDNEIVPVGG----------VTVDEGPRETSLEKMAGLKP-LVEGG 229
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
+TA AS ISDGA+A++L S GL A+I + P + TAP A A
Sbjct: 230 RLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYA 289
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
+ GL ID EINEAF+ V +A K G DP +VN +GGA++LGHPLG +GA+++
Sbjct: 290 LEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMT 349
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
TLL L G+YG+ +C GGG A+ ++E
Sbjct: 350 TLLHELERTGGRYGLQTMCEGGGTANVTIIE 380
|
Length = 382 |
| >gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (572), Expect = 1e-69
Identities = 139/406 (34%), Positives = 218/406 (53%), Gaps = 31/406 (7%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN- 71
+ IV ARTP+ + G+ + LG ++ A++RA + P V++V G AN
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMG---CANP 59
Query: 72 ---LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
G ARQ AL AG+P +V T+N+ CSSG++ + LAAQ + G D+ VAGG+ES
Sbjct: 60 EGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVES 119
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
+S + + +G L + ++Y + M AE A ++ I+++ QD
Sbjct: 120 ISCVQN---------EMNRHMLREGWLVEHKPEIY--WSMLQTAENVAKRYGISKERQDE 168
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPF--------IIVDKDEGLEKFDAAK- 239
Y ++S +R AAQ +G F EI P+ +++G + V DEG+ D
Sbjct: 169 YGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRP-DTTLE 227
Query: 240 -LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
+ K+R + GG +TAGNAS SDGA+A V+++ A GLQ + RGFA A P+
Sbjct: 228 GVSKIRSAL-PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPD 286
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSL 358
P A+PK + AGL+ ID +E+NEAF+V + + LG+ +++N +GGA+++
Sbjct: 287 EMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAV 346
Query: 359 GHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GHP G SGAR+ L + + KY V +C GGG +A + E++
Sbjct: 347 GHPYGVSGARLTGHALIEGKRRGAKYVVVTMCIGGGQGAAGLFEVL 392
|
Length = 392 |
| >gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (572), Expect = 2e-69
Identities = 144/415 (34%), Positives = 210/415 (50%), Gaps = 46/415 (11%)
Query: 17 IVGVARTPMG-GFLGSLSSVSATKLGSIAIECAL-KRANVKPLLVQEVFFGNVLSA-NLG 73
IV AR+P+G F GSL + L + + AL K + P + ++ G L G
Sbjct: 6 IVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQG 65
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
AR A+ G + TT+N+ CSS ++ +A +I+ G D+ ++ G+E++S
Sbjct: 66 FNMARVVAVLLGYDF-LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFA 124
Query: 134 K------------YLAEARK--------GSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173
K AEA+ G+ HD DG+L D VY MG AE
Sbjct: 125 KGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPD----VY--IAMGQTAE 178
Query: 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG-- 231
A I+R+EQD + +RS R A +G F EI PV + G +V D+G
Sbjct: 179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG-----TVVSTDDGPR 233
Query: 232 ----LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKI 287
EK L+P F+ G+VTAGNA ++DGAAA+V++S KA ELGL +A+I
Sbjct: 234 AGTTYEKVSQ-----LKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARI 288
Query: 288 RGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE 347
+ +PE P A +A+A AG+ ID EINEAF+ + + + LG+D +
Sbjct: 289 VSTGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDED 348
Query: 348 QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
++N GGA++LGHP G +GARI TLL L+ +G+ +C GGG A+VLE
Sbjct: 349 KLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGMAMVLE 403
|
Length = 406 |
| >gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 2e-66
Identities = 139/413 (33%), Positives = 202/413 (48%), Gaps = 55/413 (13%)
Query: 22 RTPMGGFL--GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLS-ANLGQAPAR 78
RTP G GSL V +L + +E R + V +V G V + G AR
Sbjct: 11 RTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIAR 70
Query: 79 QAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE 138
A L AG+P +V IN+ C+SG++AV LAA ++ G +D+V+AGG+ESMS P
Sbjct: 71 TAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPM---- 126
Query: 139 ARKGSRLGHDTIVDGMLKDGLWDVYNDFGM-------GVCAEICANKHTITRDEQDSYAI 191
GS DG G W + G+ A++ A K+ +R++ D+YA+
Sbjct: 127 ---GS--------DG----GAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVDAYAV 171
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250
S +R AA G FA + PV+ +G I+D DE + L KL+PSF
Sbjct: 172 ESQQRAAAAWAEGYFAKSVVPVKDQNG----LTILDHDEHMRPGTTMESLAKLKPSFAMM 227
Query: 251 GSV---------------------TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRG 289
G + AGN+S I DGAAA+++ S LGL+ A+I
Sbjct: 228 GEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVA 287
Query: 290 FADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQV 349
A P T P A KA+A AGL ID +E+NEAF+ V + + L + ++V
Sbjct: 288 TATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKV 347
Query: 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
N +GGA+++GHPLG +GA IL T+L L + + + +C GGG A ++E
Sbjct: 348 NVNGGAIAMGHPLGATGAMILGTVLDELERRGKRTALITLCVGGGMGIATIIE 400
|
Length = 402 |
| >gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Score = 215 bits (548), Expect = 4e-66
Identities = 148/397 (37%), Positives = 208/397 (52%), Gaps = 22/397 (5%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSA 70
DV IV RTPMG G+ + A L + + L R V P V+++++G V +
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AAL A IP++ T+N++C S M+A+ AA++I G D+ + GG+E M
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
+ P H GM MG+ AE+ H I+R++QD++A
Sbjct: 121 HVPMMHGVDFHPGMSLHVAKAAGM-------------MGLTAEMLGKMHGISREQQDAFA 167
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMKLRPSFK- 248
RS R AA G F EI P + G D DE + + L LRP+F
Sbjct: 168 ARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQF-DYDEVIRPETTVESLAALRPAFDP 226
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
+ G+VTAG +S +SDGA+A++++S +A ELGL+ A+IR A A P P A
Sbjct: 227 KNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPAT 286
Query: 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQVNAHGGAVSLGHPLGCS 365
KA+ AGL S ID +E+NEAF+ A+ K LGL E+VN +GGA++LGHPLGCS
Sbjct: 287 QKALKRAGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCS 346
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
GARI TLL ++ K +G+ +C G G A V E
Sbjct: 347 GARISTTLLNLMEQKDATFGLATMCIGLGQGIATVFE 383
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385 |
| >gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 6e-64
Identities = 154/436 (35%), Positives = 213/436 (48%), Gaps = 52/436 (11%)
Query: 11 KARDVCIVGVARTPMGGFL---GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNV 67
AR V IV ARTP FL G SA+ L A L R P + EV G
Sbjct: 1 MARPVYIVDGARTP---FLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCA 57
Query: 68 LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
+ + AR AL G V T+ + C+SGM+A+ AA +I LG D+V+AGG+E
Sbjct: 58 MPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVE 117
Query: 128 SMSNAP--------KYLAE------------ARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167
+MS+AP ++LA A R + V G+L+ GL D
Sbjct: 118 AMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLR-GLTDPVVGLN 176
Query: 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVD 227
MG AE+ A++ ITR++ D+YA RS +R AAQ G E+ P + GK + D
Sbjct: 177 MGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP--LFDRDGKFY---D 230
Query: 228 KDEGL-EKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIA 285
D+G+ KL KL+P F + G VTAGN+S I+DGA L+L S + GL +
Sbjct: 231 HDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLG 290
Query: 286 KIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQ------ 339
+I AA P P A + GL +D +EINEAF+ +A
Sbjct: 291 RIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADE 350
Query: 340 ----KLLGL-------DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388
+ LGL D E++N GGA++LGHP+G SGARI++ LL L+ + K G+
Sbjct: 351 EYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKRRGTKRGIAA 410
Query: 389 ICNGGGGASALVLELM 404
IC GGG A++LE +
Sbjct: 411 ICIGGGQGGAMLLERV 426
|
Length = 426 |
| >gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 7e-61
Identities = 134/394 (34%), Positives = 196/394 (49%), Gaps = 22/394 (5%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-NLGQA 75
IV RTP+G G LS + A +L L RA + P V++V G V A
Sbjct: 6 IVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNN 65
Query: 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 135
R A L AG+P V TTI+ C S +A L A I G D+ +A G+E+MS P
Sbjct: 66 ITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPL- 124
Query: 136 LAEARKGSRLGHDTIVDGMLKDGLW--DVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
G+ G G+ + W D+ N F AE A + ITR++ D++ +RS
Sbjct: 125 ------GANAGPGR---GLPRPDSWDIDMPNQFE---AAERIAKRRGITREDVDAFGLRS 172
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSG--RGKP---FIIVDKDEGLEKFDAAKLMKLRPSFK 248
+R A G F EI+PV+ G+P +V +D+GL L L+P
Sbjct: 173 QRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVL- 231
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
EGG TAG +S ISDGAAA++ + +A LGL+ A+I A P + P A
Sbjct: 232 EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQAT 291
Query: 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR 368
K + AG++ ID EINEAF+ V ++ ++ D ++VN +GGA++LGHP+G +GAR
Sbjct: 292 AKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGAR 351
Query: 369 ILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
++ T L L + +C GG ++ ++E
Sbjct: 352 LITTALHELERTDKSTALITMCAGGALSTGTIIE 385
|
Length = 387 |
| >gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 3e-56
Identities = 119/388 (30%), Positives = 189/388 (48%), Gaps = 32/388 (8%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G G L +L + + K ++ + +V GNV+ G
Sbjct: 5 IVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GMERE-IDDVILGNVVGP--GGNV 59
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
AR +AL AG+ + TI++ C +G++A+ A IQ G +AGG+ES S +P
Sbjct: 60 ARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP--- 116
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
+ +R +TI D MGV AE A ++ ITR+ QD YA S+KR
Sbjct: 117 --FQNRARFSPETI-------------GDPDMGVAAEYVAERYNITREMQDEYACLSYKR 161
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAG 256
+ A G EI ++D+ E + + +P+F G+VTAG
Sbjct: 162 TLQALEKGYIHEEILSFNG---------LLDESIKKEMNYERIIKRTKPAFLHNGTVTAG 212
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAG 316
N+ ++DGA A++++ +A +LG + + + A P T P A+ K +
Sbjct: 213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMN 272
Query: 317 LEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV 376
++ IDY+EINEAF+ +A K L + E++N +GGA++LGHP G SGA ++ L
Sbjct: 273 MKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332
Query: 377 LRHKKGKYGVGGICNGGGGASALVLELM 404
+ + KYG+ + GGG AL+ E +
Sbjct: 333 AKREDMKYGIATLGIGGGIGLALLFEKV 360
|
Length = 361 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 189 bits (481), Expect = 1e-55
Identities = 125/432 (28%), Positives = 206/432 (47%), Gaps = 48/432 (11%)
Query: 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA 70
+ + IV RTP + + A LG + + L R+ + P L++++ FG V+
Sbjct: 3 QGDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQ- 61
Query: 71 NLGQAP--ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+ +AP AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S
Sbjct: 62 -MPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADS 120
Query: 129 MSNAP----KYLAEA----RKGSRLGHD-TIVDGM-LKD------GLWDVYNDFGMGVCA 172
S P K LA A K LG + + L+D + + MG A
Sbjct: 121 SSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTA 180
Query: 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI---IVDKD 229
E A + I+R+EQD+ A RS + A G E+ + + +P + D
Sbjct: 181 EQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK-QPLEEDNNIRGD 239
Query: 230 EGLEKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIR 288
LE + KLRP+F ++ G+VTA N++ ++DGAAA++L+S +A LGL + +R
Sbjct: 240 STLEDYA-----KLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLR 294
Query: 289 GFADAAQAPEW-FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLG---- 343
+A AA P+ A P A+ AGL + + +++EAF+ +AN ++
Sbjct: 295 SYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERF 354
Query: 344 -------------LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGIC 390
+D + N GG+++ GHP +GAR++ L LR + G G+ C
Sbjct: 355 AREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGLGLTTAC 414
Query: 391 NGGGGASALVLE 402
GG +A+VLE
Sbjct: 415 AAGGLGAAMVLE 426
|
Length = 428 |
| >gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 4e-51
Identities = 127/425 (29%), Positives = 189/425 (44%), Gaps = 73/425 (17%)
Query: 18 VGVARTPMGGFLGSLSSVS---ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
G A T G F G + + A + G+ AI AL+ A V V+E G VL A GQ
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQ 60
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
A+QAA+ AG +N +C SG++A+ LA Q I G + ++AGG E M + +
Sbjct: 61 NCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAE 120
Query: 135 YLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194
A + + + N +GM R D++A+
Sbjct: 121 NNA-----------------KEKHIDVLINKYGM--------------RACPDAFALAGQ 149
Query: 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL---MKLRPSFKEGG 251
AA+ G F E A + +G I D DE ++ D A L KLRP+F +
Sbjct: 150 AGAEAAEKDGRFKDEFAKFGVKGRKGD--IHSDADEYIQFGDEASLDEIAKLRPAFDKED 207
Query: 252 SVTAGNASIISDGAAALVLVS-------GVKALELGLQVIAKIRGFADAAQAPEWFT--- 301
+TAGNA ++DGAAA +L+S G+++ +Q + I A + +
Sbjct: 208 FLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVG 267
Query: 302 -TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQ------------ 348
P A KA+ AGL +D E ++AF+ A A + LGL PE
Sbjct: 268 GDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNT 327
Query: 349 ------VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG-----ICNGGGGAS 397
+N +GGA+++GHP+G SGA I L L+ + GK G +C GGGG +
Sbjct: 328 YGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGA 387
Query: 398 ALVLE 402
A+ +E
Sbjct: 388 AMCIE 392
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393 |
| >gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 2e-47
Identities = 128/422 (30%), Positives = 198/422 (46%), Gaps = 42/422 (9%)
Query: 14 DVCIVGVARTPMG-GFLG--SLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA 70
+ I+ RTP G G +G +L+ + L + ++ +R + V ++ + S+
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWST--SS 60
Query: 71 NLGQAPA---RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
G+ R AAL AG T+++ C G+ +V LAA I G+ D+V+AGG E
Sbjct: 61 QRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTE 120
Query: 128 SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
MS A A + G + G L ++ GVC + A ITR+ D
Sbjct: 121 MMSYTA---AMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITREALD 177
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDE-GLEKFDAAKLMKLRPS 246
+ + S +R A G F + PV G + +D +E + A L L+P+
Sbjct: 178 ALGLESQRRAARAIKEGRFDKSLVPVYRDDGS----VALDHEEFPRPQTTAEGLAALKPA 233
Query: 247 FK--------EGGSV------------------TAGNASIISDGAAALVLVSGVKALELG 280
F + G+ AGN+S + DGAAAL+L S A + G
Sbjct: 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHG 293
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK 340
L+ A+I A+ P AP A K +A AGL ID +EINEAF+VVA +
Sbjct: 294 LKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIR 353
Query: 341 LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400
L LD ++VN +GGA++LGHP+G +G+ ++ T+L L + K G+ +C GG A A++
Sbjct: 354 DLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRGLKRGLVTMCAAGGMAPAII 413
Query: 401 LE 402
+E
Sbjct: 414 IE 415
|
Length = 417 |
| >gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 2e-47
Identities = 63/122 (51%), Positives = 85/122 (69%)
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK 340
L+ +A+IR +A P P+ AIPKA+ AGL + ID +EINEAF+ A+A K
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAK 60
Query: 341 LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400
LG+DPE+VN +GGA++LGHPLG SGARILVTLL L+ + GKYG+ +C GGG A++
Sbjct: 61 DLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGGKYGLATLCIGGGQGVAMI 120
Query: 401 LE 402
+E
Sbjct: 121 IE 122
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123 |
| >gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 4e-46
Identities = 123/423 (29%), Positives = 197/423 (46%), Gaps = 38/423 (8%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
+ IV RTP + + A LG + + L R+ + P L++++ FG V+
Sbjct: 9 IAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAP 68
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP- 133
AR+ LG G+ ++ + C++ ++ + A+SI G DI +AGG +S S P
Sbjct: 69 NIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPI 128
Query: 134 ---KYLAEA----RKGSRLGHD-TIVDGM-LKD------GLWDVYNDFGMGVCAEICANK 178
K LA + K LG + + LKD + + MG AE A
Sbjct: 129 GVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKT 188
Query: 179 HTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA 238
+ ITR EQD+ A RS A G A E+ K +I D + A
Sbjct: 189 YGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPP--YKQWIAEDNNI-RHNSTLA 245
Query: 239 KLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA-DAAQA 296
KLRP+F ++ GSVTA N++ ++DGAAA++L+ +A ELG++ + IR +A A
Sbjct: 246 GYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDV 305
Query: 297 PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLG------------- 343
+ PS A P A+ AGL S + +++EAF+ +AN ++
Sbjct: 306 WQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSK 365
Query: 344 ----LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399
+D + N GG+++ GHP +GAR++ L L+ + G G+ C GG +A+
Sbjct: 366 AMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRGGGLGLNTACAAGGLGAAM 425
Query: 400 VLE 402
+LE
Sbjct: 426 ILE 428
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430 |
| >gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 1e-36
Identities = 125/443 (28%), Positives = 194/443 (43%), Gaps = 74/443 (16%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA- 70
R V I+G R P G+ + S + + A++ + R ++ + EV G VL
Sbjct: 6 VRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHS 65
Query: 71 ---NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
NL R+ LG+ + + + C +G++A +L A I LG D +AGG++
Sbjct: 66 RDFNL----TRECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVD 121
Query: 128 SMSNAP--------KYLAEARKG---------------SRLGHDTIVDGMLKDGLWDVYN 164
+ S+AP K L E + L + +G + GL
Sbjct: 122 TTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGL----- 176
Query: 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI 224
MG A I A + I+R+ QD A S + AA + G F I P F+
Sbjct: 177 --SMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITP----------FL 224
Query: 225 IVDKDEGLEK-FDAAKLMKLRPSF--KEGGSVTAGNASIISDGAAALVLVSGVKALELGL 281
+ +D L KL KL+P F ++TAGN++ ++DGA+ ++L S A E GL
Sbjct: 225 GLTRDNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGL 284
Query: 282 QVIAKIRGFADAA-----QAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAI 336
V+A + A+ A E AP+ A+P+ +A GL D+YEI+EAF+ +
Sbjct: 285 PVLAYLV-DAETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVL 343
Query: 337 ANQKL----------LGL-------DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379
A K LGL D ++N +G +++ GHP +G RI+ TL +L
Sbjct: 344 ATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE 403
Query: 380 KKGKYGVGGICNGGGGASALVLE 402
K G+ IC GG +LE
Sbjct: 404 KGSGRGLISICAAGGQGVTAILE 426
|
Length = 427 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 3e-16
Identities = 50/161 (31%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA----DAAQAPEWFTTAPSLAIPK 310
+ DGAAA V+ S AL G A+I A A+ P + A K
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAH---GGAVSLGHPLGCSGA 367
A+ AGL S IDY E + + + A + LGLDP+ V + + GHPLG +G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 368 RILVTLLGVLRHKKGKY-------GVGGICNGGGGASALVL 401
IL LL +L H+ + GG +A+VL
Sbjct: 214 AILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 5e-13
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 259 SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAA-----QAPEWFTTAPS--LAIPKA 311
+SDGAAA+VL S +A EL + + I G A+ + F + + LA +A
Sbjct: 202 CPVSDGAAAVVLASEERARELTDRPV-WILGVGAASDTPSLSERDDFLSLDAARLAARRA 260
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQ------------------VNAHG 353
AG+ ID E+ + F++ + + LG + VN G
Sbjct: 261 YKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSG 320
Query: 354 GAVSLGHPLGCSGARILVTLLGVLRHKKGKY-----GVGGICNGGGGASALV 400
G +S GHPLG +G V + LR + G VG N GG SA V
Sbjct: 321 GLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARVGLAHNIGGTGSAAV 372
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPA 77
VGV TP G S S +L + A AL A ++P + V GN P
Sbjct: 1 VGVGMTP----FGRRSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPG 56
Query: 78 RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
A G+ T + +SG AV AA +I G+ D+V+ G E MS+ P
Sbjct: 57 ALIAEYLGLLGKPA-TRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPT 112
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 1e-08
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT 94
++A++LG A E A+ A + + V G + A Q A GI +
Sbjct: 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYS 63
Query: 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+N+ C++G+ A+ LA Q +Q G DIV+AGG E
Sbjct: 64 VNQACATGLTALALAVQQVQNGKADIVLAGGSEE 97
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF---ADAAQ--APEWFTTAPSLAIPKAIAN 314
+I +GA ALVL AL G ++ A+I G+ +DA AP A+ A+A+
Sbjct: 229 VIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALAD 288
Query: 315 AGLEASQIDYYEIN-------EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367
AGL IDY IN ++A +++ G + + GH LG +GA
Sbjct: 289 AGLTPEDIDY--INAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGA 346
Query: 368 RILVTLLGVLRHKK 381
+ L LR
Sbjct: 347 VEAIISLLALRDGI 360
|
Length = 412 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 6e-07
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLS--- 69
RDV I+GV +T G L VS L A AL+ A + + ++ GN+ +
Sbjct: 2 RDVAIIGVGQTK----FGELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLF 57
Query: 70 ---ANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
++ A A L A IP T + C+SG A+ A ++ G D+V+A G+
Sbjct: 58 VSQEHIAALIADYAGL-APIP----ATRVEAACASGGAALRQAYLAVASGEADVVLAAGV 112
Query: 127 ESMSNAP 133
E M++ P
Sbjct: 113 EKMTDVP 119
|
Length = 389 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 1e-06
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 34/176 (19%)
Query: 258 ASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTT--APSLAIPK 310
S I+DGAAA++L S KA E + I+ A+ + FTT A +A K
Sbjct: 208 CSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEK 266
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLG----------LDPEQ--------VNAH 352
A AG+E ID E+++ F++ I + LG Q VN
Sbjct: 267 AYKMAGIEPKDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPS 326
Query: 353 GGAVSLGHPLGCSGARILVTLLGVLRHKKGKY-------GVGGICN-GGGGASALV 400
GG + GHP+G +G V ++ LR + K G G N GG G +A+V
Sbjct: 327 GGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHNVGGTGHTAVV 382
|
Length = 389 |
| >gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 29/139 (20%)
Query: 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAA------QAPEW-FTTAPSLAIP--KA 311
+SDGAAA ++ + A LG + ++ A Q W + P+ I KA
Sbjct: 216 VSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKA 275
Query: 312 IANAGLE--ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNA 351
AG+ ++ E+++ FS+ + + LGL
Sbjct: 276 YREAGITDPREELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQI 335
Query: 352 HGGAVSLGHPLGCSGARIL 370
GG GHP+G SG R+L
Sbjct: 336 DGGLKCFGHPIGASGLRML 354
|
Length = 398 |
| >gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 1e-06
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 25/152 (16%)
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRG------FADAAQAPEWFT-TAPSLAIP 309
++ ISDG+A + S K EL + I G +A A+ EW A LA
Sbjct: 205 DSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAAR 264
Query: 310 KAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL-------------DPEQ-----VNA 351
+A A + + I+ +++AF++ I + LG E+ VN
Sbjct: 265 QAYNMAKVTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNL 324
Query: 352 HGGAVSLGHPLGCSGARILVTLLGVLRHKKGK 383
GG + GHPLG +G ++ + LR + GK
Sbjct: 325 FGGLKAKGHPLGATGLSMIYEITKQLRDEAGK 356
|
Length = 385 |
| >gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 2e-06
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
V + GV TP F +S + + A AL A + VQ+ + G V
Sbjct: 1 NKVFVAGVGMTP---FEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVY---- 53
Query: 73 GQAPARQAAL---G-AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
G + + Q AL G GIP +V +N CS+G A+ LA Q+++ G D +A G E
Sbjct: 54 GDSTSGQRALYEVGMTGIP--IV--NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQ 109
Query: 129 M 129
M
Sbjct: 110 M 110
|
Length = 391 |
| >gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 7e-06
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 41/174 (23%)
Query: 259 SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT---------TAPSLAIP 309
S++SDGAAALVL A L V F A ++ P A
Sbjct: 213 SLVSDGAAALVLADAETARALQRAV-----RFRARAHVNDFLPLSRRDPLAFEGPRRAWQ 267
Query: 310 KAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNA 351
+A+A AG+ + + E ++ F++ + + +GL P VN
Sbjct: 268 RALAQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNP 327
Query: 352 HGGAVSLGHPLGCSG-------ARILVTLLGVLRHKKGKYGVGGICNGGGGASA 398
GG + GHP+G +G A L G ++ K + G+ N GG A A
Sbjct: 328 SGGLKAKGHPIGATGVSMHVLAAMQLTGEAGGMQIPGAK--LAGVFNMGGAAVA 379
|
Length = 389 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 40/193 (20%), Positives = 64/193 (33%), Gaps = 11/193 (5%)
Query: 199 AAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT---A 255
AA L A +A + +G+ + +E D S E S T A
Sbjct: 94 AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAA 153
Query: 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA-----DAAQAPEWFTTAPSLAIPK 310
+ + DGA ALV+ AL G + A+I G A A + A +
Sbjct: 154 ADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKE 213
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGA 367
A+A AGL IDY + + + + L + G+ +
Sbjct: 214 ALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVV 273
Query: 368 RILVTLLGVLRHK 380
+ + +L H
Sbjct: 274 LAVDEAVLMLEHG 286
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 17/134 (12%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF-----ADAAQAPEWFTTAPSLAIPKAIAN 314
++ +G A LVL S A + G ++ +I GF A APE + AI + +A
Sbjct: 207 VLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLAR 266
Query: 315 AGLEASQIDYY-------EINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367
+GL IDY +N+ I L P +V + GH LG SGA
Sbjct: 267 SGLTPEDIDYIHAHGTATRLNDQREANLIQA-----LFPHRVAVSSTKGATGHTLGASGA 321
Query: 368 RILVTLLGVLRHKK 381
+ L LRH++
Sbjct: 322 LGVAFSLLALRHQQ 335
|
Length = 381 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 44/135 (32%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-------LAIP 309
++ +GA LVL S A G ++ A+I G+ DA TAP A+
Sbjct: 228 VLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHI-----TAPDPDGEGAARAMR 282
Query: 310 KAIANAGLEASQIDYYEIN------------EAFSVVAIANQKLLGLDPEQVNAHGGAVS 357
A+A+AGL IDY IN E+ AI +++ G ++V VS
Sbjct: 283 AALADAGLSPEDIDY--INAHGTSTPLNDAAES---KAI--KRVFGEHAKKV-----PVS 330
Query: 358 -----LGHPLGCSGA 367
GH LG +GA
Sbjct: 331 STKSMTGHLLGAAGA 345
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW----FTTAPSLAIPKAIANAG 316
I+DGAAA+VL +G +A EL + A I G ++P T +PS A+ A G
Sbjct: 204 ITDGAAAVVLAAGDRAREL-RERPAWITGIEHRIESPSLGARDLTRSPSTALAAEAA-TG 261
Query: 317 LEASQIDYYEINEAFSVVAIANQKLLGL-DPEQVNAHGGAVSLGHPLGCSG-ARI 369
+A +D E++ F+ + ++ LGL D +VN GGA++ +P+ +G RI
Sbjct: 262 GDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERI 315
|
Length = 352 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 75 APARQAALGAGI--PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131
A Q A+ G+ PN V T C+SG A+ AA+ I+LG D+V+AGG E++
Sbjct: 139 MAAGQVAIRLGLRGPNYTVSTA----CASGAHAIGDAARLIRLGRADVVIAGGAEALIT 193
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 41/178 (23%)
Query: 259 SIISDGAAALVLVSGVKALEL-GLQVIAKIRGF-------------ADAAQAPEWFTTAP 304
S ++DG A +VL S + + I +I+G+ +A P P
Sbjct: 220 SQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL---P 276
Query: 305 SL--AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE--------------- 347
+ A+ A AG+ +D +E+++ F+ +GL
Sbjct: 277 HVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIG 336
Query: 348 ---QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG----GGASA 398
+N GG + GHP+G SG R+L+ + G Y V G G GG++
Sbjct: 337 GRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTAGDYQVEGAKTFGTLNIGGSTT 394
|
Length = 403 |
| >gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 3e-04
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91
SS S TKL + A AL +A++ PL + + +L G A QA +GA V
Sbjct: 47 SSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRA---V 103
Query: 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
I CS + A++ A Q IQ G ++ G +++S
Sbjct: 104 AFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLS 142
|
Length = 326 |
| >gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 44/175 (25%)
Query: 259 SIISDGAAALVLVSGVKALELGLQ----VIAKIRGFA--------DAAQAPEWFTTAPSL 306
S +SDG A LVL S ++GL + +I+ A D A FT+
Sbjct: 256 SQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTS--RA 313
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL-DPEQ----------------- 348
A KA++ AG++ S + E+++ F++ + + LG+ +
Sbjct: 314 AAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIP 373
Query: 349 VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG---------VGGICNGGG 394
VN GG +S GHP+G +G + ++ V R KG+ G +G N GG
Sbjct: 374 VNTGGGLLSFGHPVGATGVK---QIMEVYRQMKGQCGEYQMKNIPALGATLNMGG 425
|
Length = 438 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 404 | |||
| PRK09051 | 394 | beta-ketothiolase; Provisional | 100.0 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 100.0 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 100.0 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 100.0 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 100.0 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 100.0 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 100.0 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 100.0 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 100.0 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 100.0 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 100.0 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 100.0 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 100.0 | |
| PRK06158 | 384 | thiolase; Provisional | 100.0 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 100.0 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 100.0 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 100.0 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 100.0 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 100.0 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 100.0 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 100.0 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 100.0 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 100.0 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.97 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.97 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.97 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.97 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.97 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.97 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.96 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.96 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.96 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.96 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.96 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.96 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.95 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.95 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.95 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.95 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.95 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.95 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.95 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.94 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.94 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.94 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.94 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 99.94 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.93 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.93 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.93 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.92 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.92 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.92 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.92 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.92 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.92 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.92 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.92 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.92 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.91 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.91 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.91 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.91 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.91 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.9 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.9 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.9 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.88 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.88 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.87 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.87 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.87 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.87 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.86 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.86 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 99.86 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.85 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.84 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.82 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.82 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.82 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.79 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.78 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 99.77 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.77 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.74 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.66 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.65 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 99.64 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 99.63 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 99.63 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 99.31 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 99.25 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 99.22 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 99.13 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 98.77 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 98.76 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 98.75 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.42 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 97.91 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 97.87 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 95.77 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 95.55 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 95.29 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 95.11 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 95.01 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 94.73 | |
| PRK06158 | 384 | thiolase; Provisional | 94.44 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 94.05 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 93.86 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 93.6 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 93.42 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 93.35 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 93.18 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 93.03 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 93.0 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 92.93 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 92.83 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 92.7 | |
| PRK06840 | 339 | hypothetical protein; Validated | 92.51 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 92.46 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 92.45 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 92.42 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 92.11 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 91.94 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 91.91 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 91.87 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 91.87 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 91.83 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 91.83 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 91.74 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 91.62 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 91.62 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 91.47 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 91.43 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.43 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 91.4 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 91.21 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.16 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 90.95 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 90.64 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 90.63 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 90.48 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 90.46 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 89.96 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 89.73 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 89.18 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 89.17 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 89.07 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 88.97 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 88.24 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 87.96 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 87.86 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 87.81 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 87.77 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 86.84 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 86.81 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 86.78 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 86.71 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 86.57 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 86.33 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 86.0 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 85.79 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 85.71 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 85.22 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 84.91 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 84.81 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 84.39 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 84.21 | |
| COG1214 | 220 | Inactive homolog of metal-dependent proteases, put | 84.16 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 83.95 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 83.85 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 83.59 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 83.3 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 83.14 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 82.98 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 82.47 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 82.38 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 82.08 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 80.37 |
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-72 Score=553.16 Aligned_cols=391 Identities=41% Similarity=0.639 Sum_probs=345.8
Q ss_pred CCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCC
Q 015576 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~ 89 (404)
||++|||||++||||+++.+.+.++++.+|+.+|+++||+++|+++++||.+++|++.+... +.+.+..++..+|++.+
T Consensus 1 ~m~~v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~ 80 (394)
T PRK09051 1 MMREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQE 80 (394)
T ss_pred CCCcEEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCC
Confidence 56899999999999999878889999999999999999999999999999999999987653 35677778888899756
Q ss_pred cceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHH
Q 015576 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (404)
Q Consensus 90 ~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (404)
.|+++|+++|+|++.++..|+++|++|.+|++||+|+|++|+.|......+.+..++.....+.+ .+.+.+++....|+
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 159 (394)
T PRK09051 81 TPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMM-VGALHDPFGTIHMG 159 (394)
T ss_pred CceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhh-cccccccccCCCHH
Confidence 89999999999999999999999999999999999999999877522111212122211111111 12233344345699
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcC
Q 015576 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFK 248 (404)
Q Consensus 170 ~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~ 248 (404)
+.|++|+++||++||++|+|++++|+|+.+|+.+++|+.||+|+++++++++ .++++|+.+|+ +|+|+|+++||+++
T Consensus 160 ~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~--~~~~~da~~r~~~t~e~v~~~~~v~~ 237 (394)
T PRK09051 160 VTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGE--VVFDTDEHVRADTTLEDLAKLKPVFK 237 (394)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCC--eEECCCCCCCCCCCHHHHcCCCCccc
Confidence 9999999999999999999999999999999999999999999998876554 35789999999 99999999999997
Q ss_pred CC-CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEee
Q 015576 249 EG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEI 327 (404)
Q Consensus 249 ~~-g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~ 327 (404)
++ |++|++|||+++|||+|+||++++.+++++.+|+++|.|++.....+......+..+++++|+++|++++|||++|+
T Consensus 238 ~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~~ei 317 (394)
T PRK09051 238 KENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDVIEA 317 (394)
T ss_pred CCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCEEEe
Confidence 65 89999999999999999999999999999999989999999998777666778899999999999999999999999
Q ss_pred cccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 328 NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 328 hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
||+|++.++.+.|.||++++|+|++||++++|||.|+||+++++++++||+++++++|++++|++||+|.|+|||++
T Consensus 318 ~d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~~~g~~~~c~~gG~g~a~~~e~~ 394 (394)
T PRK09051 318 NEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGGRYALVTMCIGGGQGIAAIFERL 394 (394)
T ss_pred cCccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccChhhEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999984
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-72 Score=552.05 Aligned_cols=390 Identities=47% Similarity=0.721 Sum_probs=343.3
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|||||++||||+++.+.+.++++.+|+.+|+++||+++|+++++||.+++|+..+...+.+++..++..+|++.+.|+
T Consensus 2 ~~v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~ 81 (393)
T PRK08235 2 SKTVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQT 81 (393)
T ss_pred CcEEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcce
Confidence 68999999999999987888899999999999999999999999999999999997754566778888899999767999
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (404)
++|+.+|+|++.++..|+.+|++|.+|++||+|+|++|+.|......+.+..++.....+.+..+++.+.+....|+..|
T Consensus 82 ~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 161 (393)
T PRK08235 82 ETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYG 161 (393)
T ss_pred eehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHH
Confidence 99999999999999999999999999999999999999877432111212222211111111112333333345799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCCC
Q 015576 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (404)
Q Consensus 173 ~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~g 251 (404)
++|+++||+|||++|+|++++|+|+.+|...++|++||+|++++++++.+ +.+++|+.+|+ +|+|+++++||+++++|
T Consensus 162 ~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~p~g 240 (393)
T PRK08235 162 GEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRKDTTIEKLAKLKPVFDKTG 240 (393)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCc-eEeCCCCCCCCCCCHHHHhcCCCcccCCC
Confidence 99999999999999999999999999999999999999999987665554 45789999999 99999999999999889
Q ss_pred ccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
++|++|||+++|||+|+||++++.+++++.+|+++|.+++.....+..+...+..+++++|+++|++++|||++|+||+|
T Consensus 241 ~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~e~~d~f 320 (393)
T PRK08235 241 TITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLFEINEAF 320 (393)
T ss_pred cEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCeehhcchh
Confidence 99999999999999999999999999999999889999888765555555566789999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+++.+.++|.||++++|+|++||++++|||.|+||+++++++++||+++++++|++++|++||+|.|+|||+
T Consensus 321 ~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 321 AAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred HHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccccceEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-71 Score=546.26 Aligned_cols=391 Identities=38% Similarity=0.574 Sum_probs=344.0
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|||||++||||+++.+.++++++.+|+.+|+++||+++|+++++||.+++|++.+...+++.+..++..+|++++.|+
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~ 81 (404)
T PRK06205 2 RDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPG 81 (404)
T ss_pred CceEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCce
Confidence 68999999999999988889999999999999999999999999999999999998877777788889999999766899
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccc---ccc-ccccH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW---DVY-NDFGM 168 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~ 168 (404)
++|+.+|+|++.++..|+++|++|.+|+|||+|+|++++.|......+.+..++.....+.+..+.+. ..+ ....|
T Consensus 82 ~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 161 (404)
T PRK06205 82 MQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGM 161 (404)
T ss_pred eehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCH
Confidence 99999999999999999999999999999999999999866422222222222111111111111111 111 13467
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCc
Q 015576 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (404)
Q Consensus 169 ~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~ 247 (404)
+..|++|+++||++||++|+|++++|+|+.++.+.+.|++||+|+++++++++| .++++|+.+|+ +|+|+++++||++
T Consensus 162 ~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~ 240 (404)
T PRK06205 162 IETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-TVVDRDEHPRADTTLESLAKLRPIM 240 (404)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCc-eEeccCCCCCCCCCHHHHhcCCCcC
Confidence 778999999999999999999999999999999999999999999988766666 45889999999 9999999999999
Q ss_pred ---CCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcce
Q 015576 248 ---KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (404)
Q Consensus 248 ---~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 324 (404)
++.|++|++|||+++|||+|+||++++.+++++.+|+++|.|++...+.+.....++..+++++|+++|++++|||+
T Consensus 241 ~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~ 320 (404)
T PRK06205 241 GKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGLTLDDIDL 320 (404)
T ss_pred ccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCCCHHHCCE
Confidence 57789999999999999999999999999999999989999999988777666678899999999999999999999
Q ss_pred EeecccchHHHHHHHHHhCCCC---CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEE
Q 015576 325 YEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lg~~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll 401 (404)
+|+||+|+++++.++|.|||++ .|+|++||++++|||.|+||+++++++++||+++++++||+++|++||+|.|+||
T Consensus 321 ~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg~g~a~~~ 400 (404)
T PRK06205 321 IELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGGQGLAAVF 400 (404)
T ss_pred eeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCChhhEEEE
Confidence 9999999999999999999997 5899999999999999999999999999999999999999999999999999999
Q ss_pred EeC
Q 015576 402 ELM 404 (404)
Q Consensus 402 ~~~ 404 (404)
|++
T Consensus 401 e~~ 403 (404)
T PRK06205 401 ERV 403 (404)
T ss_pred Eec
Confidence 984
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-71 Score=544.45 Aligned_cols=382 Identities=45% Similarity=0.673 Sum_probs=336.3
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|+|||+++|||+|+.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+...+++.+++++..+|++.++|.
T Consensus 2 ~~v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~ 81 (388)
T PRK06366 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTK 81 (388)
T ss_pred CcEEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcc
Confidence 68999999999999988888889999999999999999999999999999999887554456778889999999756899
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhh-hhcCCCC--CCcccc-ccccccccccccccccH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-ARKGSRL--GHDTIV-DGMLKDGLWDVYNDFGM 168 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~-~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~ 168 (404)
++++++|+|++.++..|+++|++|.+|+|||+|+|++++.|..... .+.+..+ ...... +.+...++.+++....|
T Consensus 82 ~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~m 161 (388)
T PRK06366 82 YTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHM 161 (388)
T ss_pred eeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccH
Confidence 9999999999999999999999999999999999999986643211 1101100 000000 11112344444444568
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcC
Q 015576 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (404)
Q Consensus 169 ~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~ 248 (404)
++.|++|+++||+|+|++|+|++++|+|+.+||.+++|+++|+|+.. +++||.+|++|+|+|+++||+++
T Consensus 162 al~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~----------~~~d~~~r~~t~e~~~~s~~v~~ 231 (388)
T PRK06366 162 GVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND----------LDRDEGIRKTTMEDLAKLPPAFD 231 (388)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccc----------cccccCcccCCHHHHhhCCCccC
Confidence 99999999999999999999999999999999999999999988640 67899999999999999999999
Q ss_pred CCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeec
Q 015576 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (404)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~h 328 (404)
++|++|++|||+++|||+|+||++++.+++++.+|.++|.+++.....+..+...+..+++++|+++|++++|||++|+|
T Consensus 232 p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~ 311 (388)
T PRK06366 232 KNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDYYDLVEHN 311 (388)
T ss_pred CCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHHHcceeecc
Confidence 88999999999999999999999999999999889789999999987776666677899999999999999999999999
Q ss_pred ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 329 EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 329 d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
|+|+++++.++|.||++.+|+|++||.+++|||.|+||+++++++++||+++++++||+++|++||+|.++|||++
T Consensus 312 daFa~~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~~~~g~~~~c~~gg~g~a~~~e~~ 387 (388)
T PRK06366 312 EAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHMKTGLATLCHGGGGAHTLTLEMV 387 (388)
T ss_pred chhHHHHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcCCCeEEEEEecccChhhEEEEEec
Confidence 9999999999999999988999999999999999999999999999999999999999999999999999999985
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-70 Score=538.09 Aligned_cols=390 Identities=45% Similarity=0.735 Sum_probs=345.8
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|||||+++|||+++.+.++++++.+|+.+|+++||+++|+++++||.+++|+..+...+++++..++..+|++...|+
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~ 81 (393)
T PRK05656 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPA 81 (393)
T ss_pred CcEEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcce
Confidence 68999999999999988888999999999999999999999999999999999987655567788899999999744899
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (404)
++|+.+|+|++.++..|+++|++|.+|++||+|+|++|..|......+.+.+++.....+....+.+++.+....|++.|
T Consensus 82 ~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 161 (393)
T PRK05656 82 MTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITA 161 (393)
T ss_pred EEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHH
Confidence 99999999999999999999999999999999999999877532111222222211111111112333333335699999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCCC
Q 015576 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (404)
Q Consensus 173 ~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~g 251 (404)
++|+++||+|||++|+|++++|+|+.+|+..++|+++|+|+++.+..++| ++++.||.+|+ +|.|.+.++||++.++|
T Consensus 162 ~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~-~~~~~D~~~r~~~~~e~l~~l~p~~~~~g 240 (393)
T PRK05656 162 ENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEP-LAFATDEQPRAGTTAESLAKLKPAFKKDG 240 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCc-eEeccCCCCCCCCCHHHHhcCCCCcCCCC
Confidence 99999999999999999999999999998888999999999998766665 56899999999 99999999999998788
Q ss_pred ccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
++|++|||+++|||+|+||++++.+++++.+++++|.|++.....+.....++..+++++|+++|++++|||++++||+|
T Consensus 241 ~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~f 320 (393)
T PRK05656 241 SVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEAF 320 (393)
T ss_pred CEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCcc
Confidence 99999999999999999999999999999999999999999887777676788899999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+...+.+.|.||++.+|+|++||++++|||.|+||+++++++++||+.+++++||+++|++||+|.|+|||+
T Consensus 321 ~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 321 AAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred HHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHcCCCEEEEEEcccCcceEEEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-70 Score=531.93 Aligned_cols=391 Identities=41% Similarity=0.617 Sum_probs=344.4
Q ss_pred CCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc
Q 015576 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~ 90 (404)
|.++|+|||+.||||+++.+.+.+.++.+|+.++++++|+++|+++++||.+++|+..+...+++.+++++..+|++.+.
T Consensus 1 ~~~~~~iv~~~Rtp~~~~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~ 80 (392)
T PRK06633 1 MTKPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEV 80 (392)
T ss_pred CCCCEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCc
Confidence 45789999999999999889999999999999999999999999999999999999987666778889899999998679
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|+++|+++|+||+.|+..|+++|++|.+|++||+|+|++|..|.... .+....++.....+.+..+.+.+++.+..|++
T Consensus 81 p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (392)
T PRK06633 81 PGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSY-IRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGI 159 (392)
T ss_pred cchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchh-cccccccCcchhhhhhcccccccccCcchHHH
Confidence 99999999999999999999999999999999999999997663110 01111111100111111222323333457999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCC
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~ 249 (404)
.|++|+++||+|||++|+|++++|+|+.+||.+++|+++|+|++++..++. .+++.|+.+|+ .+.|.+.+++|++++
T Consensus 160 ~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~--~~~~~d~~~rp~~~~e~l~~l~p~~~~ 237 (392)
T PRK06633 160 TAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTT--SLFDHDETVRPDTSLEILSKLRPAFDK 237 (392)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCc--eeeccCCCCCCCCCHHHHccCCCccCC
Confidence 999999999999999999999999999999999999999999987643333 35899999999 888988888999988
Q ss_pred CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecc
Q 015576 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (404)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd 329 (404)
+|++|++|||+++|||+++||++++.+++++.+|+++|.|++...+++..+...+..+++++|+++|++++|||++|+||
T Consensus 238 ~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~ei~d 317 (392)
T PRK06633 238 NGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIEVNE 317 (392)
T ss_pred CCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeeehhh
Confidence 89999999999999999999999999999999999999999999877776667778999999999999999999999999
Q ss_pred cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 330 ~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+|+++.++..|.||++..|+|++||++++|||.||||+++++++++||+++++++|++++|++||+|.|+|||++
T Consensus 318 afa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~~~~~g~~~~c~~gG~g~a~~~e~~ 392 (392)
T PRK06633 318 AFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRAKAKKGLVTLCIGGGMGMAMCVEAV 392 (392)
T ss_pred HHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEecccChhheEEEEeC
Confidence 999999999999999888999999999999999999999999999999999999999999999999999999986
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-69 Score=529.83 Aligned_cols=376 Identities=36% Similarity=0.530 Sum_probs=338.0
Q ss_pred CCceEEEeeccCcccc--CCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCC
Q 015576 12 ARDVCIVGVARTPMGG--FLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN 88 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~--~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~ 88 (404)
|++||||++.||||++ +.+++++.++.+|+.+|++++|+++|+++++||.+++|+..+... +.+.++.++..+|++.
T Consensus 1 m~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~ 80 (402)
T PRK08242 1 MTEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPE 80 (402)
T ss_pred CCcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCC
Confidence 3689999999999998 468999999999999999999999999999999999999988653 5678888889999976
Q ss_pred CcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccc-cccccc
Q 015576 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD-VYNDFG 167 (404)
Q Consensus 89 ~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 167 (404)
+.|+++|+++|+|++.||..|+++|++|.+|++|++|+|++|+.|+... +.. + ..+.+.. ++....
T Consensus 81 ~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~----~~~----~-----~~~~~~~~~~~~~~ 147 (402)
T PRK08242 81 TVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSD----GGA----W-----AMDPSTNFPTYFVP 147 (402)
T ss_pred CCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCccccc----Ccc----c-----ccCcccccccccCC
Confidence 7999999999999999999999999999999999999999999875221 100 1 1122211 222357
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCC
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~ 246 (404)
|++.|++|+++||+|||++|+|++++|+|+.++...++|++||+|++ .+++. .++++|+.+|+ +|+|+|.++||+
T Consensus 148 mg~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~--~~~~~--~~~~~de~~r~~~t~e~l~~l~p~ 223 (402)
T PRK08242 148 QGISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVK--DQNGL--TILDHDEHMRPGTTMESLAKLKPS 223 (402)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeee--cCCCC--EeeCCCCCCCCCCCHHHHhCCCCC
Confidence 89999999999999999999999999999999999999999999997 22332 34899999999 999999999999
Q ss_pred cCC----CC-----------------ccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchH
Q 015576 247 FKE----GG-----------------SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305 (404)
Q Consensus 247 ~~~----~g-----------------~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 305 (404)
|++ +| ++|.+|||+++|||+|+||++++.+++++.+|+++|.|++...+.+..+..++.
T Consensus 224 f~~~~~~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~ 303 (402)
T PRK08242 224 FAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPV 303 (402)
T ss_pred ccCccccCcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHH
Confidence 986 44 589999999999999999999999999999888999999998877776777888
Q ss_pred HHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCcee
Q 015576 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (404)
Q Consensus 306 ~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~g 385 (404)
.+++++|+++|++++|||++|+||+|+.+.+.++|.||++++|+|++||++++|||.|+||+++++++++||+.+++++|
T Consensus 304 ~a~~~al~~AGl~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~~~~~g 383 (402)
T PRK08242 304 PATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERRGKRTA 383 (402)
T ss_pred HHHHHHHHHcCCCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeccccceeeeEEEeC
Q 015576 386 VGGICNGGGGASALVLELM 404 (404)
Q Consensus 386 l~~~~~~gG~~~a~ll~~~ 404 (404)
|+++|+|||+|.|+|||++
T Consensus 384 ~~~~c~ggG~g~a~~~e~~ 402 (402)
T PRK08242 384 LITLCVGGGMGIATIIERV 402 (402)
T ss_pred EEEEcccCCceeEEEEEeC
Confidence 9999999999999999984
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-69 Score=532.91 Aligned_cols=390 Identities=51% Similarity=0.764 Sum_probs=341.0
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|+|||+++|||+|+.+.+.+++..+|+.+|+++||+|+|+++++||.+++|+..+...+++.+..+...+|++.+.|.
T Consensus 2 ~~v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~ 81 (393)
T PRK05790 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPA 81 (393)
T ss_pred CceEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCce
Confidence 68999999999999987778889999999999999999999999999999999887655556667667778898755799
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (404)
++++.+|+|++.+|..|+.+|++|.+|+|||+|+|++|+.|....+.+.+..++.....+++..++.++++.+..|++.|
T Consensus 82 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 161 (393)
T PRK05790 82 LTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITA 161 (393)
T ss_pred eeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHH
Confidence 99999999999999999999999999999999999998876421111111111110011111112222333356899999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCCC
Q 015576 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (404)
Q Consensus 173 ~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~g 251 (404)
++||++||+++|++++|++++|+|+.+|++++.|+.+|+|+.+.+...+| ++++.|+.++. ++.|++..++|+++++|
T Consensus 162 ~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~-~~~~~d~~~~~~~~~e~l~~~~~v~~~~g 240 (393)
T PRK05790 162 ENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHPRPDTTAESLAKLRPAFDKDG 240 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCc-eEecCCCCCCCCCCHHHHhCCCCccCCCC
Confidence 99999999999999999999999999999999999999999987765666 45788999998 99999999999999889
Q ss_pred ccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
++|++|||+++|||+++||++++.+++++.+|+++|.|++.....+......+..+++++|+++|++++|||++|+||+|
T Consensus 241 ~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f 320 (393)
T PRK05790 241 TVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLIEINEAF 320 (393)
T ss_pred CEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHH
Confidence 99999999999999999999999999999899889999999876665555567889999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
++..+.++|.||+|+.|+|++||++++|||+|+||+++++++++||+++++++||++.|++||+|.++|||+
T Consensus 321 ~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 321 AAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred HHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCceeEEEEEc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-69 Score=532.84 Aligned_cols=391 Identities=50% Similarity=0.788 Sum_probs=341.0
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~ 91 (404)
.++|+|||++||||+++.+.+++.++.+|+.+|+++||+++|+++++||.+++|+..+.+.+.+.+.+.+..+|++...|
T Consensus 6 ~~~V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p 85 (397)
T PRK06954 6 QDPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVG 85 (397)
T ss_pred CCCEEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCcc
Confidence 56899999999999998788889999999999999999999999999999999998876666667777778889986699
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccc-ccccHHH
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY-NDFGMGV 170 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 170 (404)
+++|+.+|+||+.++..|+.+|++|.+|++||+|+|++|+.|......+.+..++.....+.+..+.+.+.+ .+..|++
T Consensus 86 ~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (397)
T PRK06954 86 CTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGT 165 (397)
T ss_pred EeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHH
Confidence 999999999999999999999999999999999999999866532211212122211111222222222222 2467999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCC
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG 250 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 250 (404)
.|++|+++||++||++|+|++++|+|+.++...+.|++++.|+++++..+.+ .+++|+.+|+.+.|.+...+|+++++
T Consensus 166 ~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~--~v~~D~~pr~~~~~~l~~l~~~f~~~ 243 (397)
T PRK06954 166 FAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDT--VIDRDEQPFKANPEKIPTLKPAFSKT 243 (397)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCe--EeccCCCcCCCCHHHHhCCCCccCCC
Confidence 9999999999999999999999999999755557788899999987765543 48899999999999999999999988
Q ss_pred CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeeccc
Q 015576 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (404)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~ 330 (404)
|++|++|||+++|||+|+||++++.+++++.+|+++|.+++.....+..+..++..+++++|+++|++++|||++|+||+
T Consensus 244 g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~d~ 323 (397)
T PRK06954 244 GTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVDLFEINEA 323 (397)
T ss_pred CcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCCEEehhhH
Confidence 99999999999999999999999999999999988999988876666556667889999999999999999999999999
Q ss_pred chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 331 FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 331 ~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
|+++++..+|.||++++|+|++||++++|||.|+||+++++++++||+++++++|++++|++||+|.|+|||++
T Consensus 324 fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g~a~~~e~~ 397 (397)
T PRK06954 324 FAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEATAMGIELI 397 (397)
T ss_pred HHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchhhEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-69 Score=529.19 Aligned_cols=389 Identities=36% Similarity=0.560 Sum_probs=343.5
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCCc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~-agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~~ 90 (404)
++|+|+|++||||+++.+.+.+.++.+|+.+|++++|++ +++++++||.+++|++.+... ++++++.++..+|++.+.
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~v 81 (400)
T PRK13359 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGV 81 (400)
T ss_pred CcEEEEeccCCCccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 579999999999999888899999999999999999996 699999999999999986553 578999999999998779
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCc-cccccc-----cccccccccc
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDGM-----LKDGLWDVYN 164 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~ 164 (404)
|+++|+++|+||+.|+..|+++|++|.+|++|++|+|+||+.|+..... +..++.. ...+.. ...++.+.+.
T Consensus 82 p~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
T PRK13359 82 PGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKA--ESAFSRQAEIFDTTIGWRFVNPLMKQLYG 159 (400)
T ss_pred ceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccc--cccccCCcccccccccccccCCccccccc
Confidence 9999999999999999999999999999999999999999988532111 1111100 001111 1123334444
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCC
Q 015576 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (404)
Q Consensus 165 ~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~ 244 (404)
...|++.|++++++||+|||++|+|++++|+++..+...++|++||+|+.+++.+..+ ++++.||.+|++|+|+|.+++
T Consensus 160 ~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~De~~r~~t~e~l~~l~ 238 (400)
T PRK13359 160 VDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLEALAKLK 238 (400)
T ss_pred cCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCc-eeecCCCCCCCCCHHHHhcCC
Confidence 5689999999999999999999999999999877777778999999999887654433 458999999999999999999
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcce
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 324 (404)
|+++++|++|++|||+++|||+|+||++++.+++++.+|+++|.|++....++..+..++.++++++|+++|++++|||+
T Consensus 239 p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~ 318 (400)
T PRK13359 239 GVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLDQFDV 318 (400)
T ss_pred CccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCHHHcCc
Confidence 99998899999999999999999999999999999999999999999986667666678899999999999999999999
Q ss_pred EeecccchHHHHHHHHHhCCCC--CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 325 YEINEAFSVVAIANQKLLGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lg~~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
+|+||+|+.+.+.++|.||+++ .|+|++||.+++|||.|+||+++++++++||+++++++||+++|++||+|.++|||
T Consensus 319 iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~~~~c~~gG~g~a~~ie 398 (400)
T PRK13359 319 IELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERTGGRFALCTMCIGVGQGIAIAIE 398 (400)
T ss_pred CccCcHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhcCCCeEEEEEcccCCceeEEEEE
Confidence 9999999999999999999965 69999999999999999999999999999999999999999999999999999999
Q ss_pred eC
Q 015576 403 LM 404 (404)
Q Consensus 403 ~~ 404 (404)
++
T Consensus 399 ~~ 400 (400)
T PRK13359 399 RV 400 (400)
T ss_pred eC
Confidence 84
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-68 Score=526.10 Aligned_cols=389 Identities=40% Similarity=0.588 Sum_probs=343.3
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCCc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALK-RANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~-~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~~ 90 (404)
++|||||++||||+++.+.+.+.++.+|+.+|++++|+ ++|+++++||.+++|++.+... +.+.++.++..+|++.++
T Consensus 2 ~~V~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~v 81 (401)
T PRK09050 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSV 81 (401)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCC
Confidence 68999999999999988888899999999999999999 5899999999999999876554 477889999999998779
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCc-cccccc-----cccccccccc
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDGM-----LKDGLWDVYN 164 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~ 164 (404)
|+++|+++|+||+.|+..|+++|++|.+|++||+|+|+||+.|......+ ..++.. ...+.. ...++.+.+.
T Consensus 82 P~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (401)
T PRK09050 82 PGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKAD--SAFSRQAEIFDTTIGWRFVNPLMKAQYG 159 (401)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchh--hhcccCcccccccccccccCCccccccc
Confidence 99999999999999999999999999999999999999999875211111 111100 001110 0112223334
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcC
Q 015576 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (404)
Q Consensus 165 ~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~ 243 (404)
...|++.|++|+++||++||++|.|+..+++|+..+..+++|++||+|+.+++.++++ +++++|+.+|+ +|+|+|+++
T Consensus 160 ~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~-~~~~~da~~r~~~t~e~l~~l 238 (401)
T PRK09050 160 VDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETTLEALAKL 238 (401)
T ss_pred cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCc-eeeCCCCCCCCCCCHHHHhcC
Confidence 5689999999999999999999999999999999999999999999999987755554 46889999998 999999999
Q ss_pred CCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcc
Q 015576 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 323 (404)
||+++++|++|++|||+++|||+|+||++++.+++++.+|+++|.|++.....+......+..+++++|+++|++++|||
T Consensus 239 ~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId 318 (401)
T PRK09050 239 KPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTIDQFD 318 (401)
T ss_pred CCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCC
Confidence 99998889999999999999999999999999999998898999999998766666666788999999999999999999
Q ss_pred eEeecccchHHHHHHHHHhCCCC--CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEE
Q 015576 324 YYEINEAFSVVAIANQKLLGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lg~~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll 401 (404)
++|+||+|+.+.+.++|.||+|+ .|+|++||.+++|||.|+||+++++++++||+++++++|++++|++||+|.++||
T Consensus 319 ~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~~~g~~~~c~~gG~g~a~~~ 398 (401)
T PRK09050 319 VIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALCTMCIGVGQGIALAI 398 (401)
T ss_pred ccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccceeEEEE
Confidence 99999999999999999999976 5999999999999999999999999999999999999999999999999999999
Q ss_pred EeC
Q 015576 402 ELM 404 (404)
Q Consensus 402 ~~~ 404 (404)
|++
T Consensus 399 e~~ 401 (401)
T PRK09050 399 ERV 401 (401)
T ss_pred EeC
Confidence 984
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-68 Score=525.43 Aligned_cols=389 Identities=40% Similarity=0.581 Sum_probs=341.1
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCCc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALK-RANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~-~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~~ 90 (404)
++|||||++||||+++.+.+++.++.+|+.+|++++|+ ++++++++||.+++|++.+... +++.++.++..+|++.+.
T Consensus 1 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 46999999999999988888899999999999999999 5799999999999999875443 577899999999998679
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCc-cccccc-----cccccccccc
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDGM-----LKDGLWDVYN 164 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~ 164 (404)
|+++|+++|+||+.|+..|+.+|++|.+|++||+|+|+||+.|+.... .+..++.. ...+.. ...++.+.+.
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGK--ADSAFSRSAKIEDTTIGWRFINPLMKALYG 158 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccc--cccccccccccccccccccccCcccccccc
Confidence 999999999999999999999999999999999999999987742111 01111100 001100 0122223333
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcC
Q 015576 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (404)
Q Consensus 165 ~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~ 243 (404)
...|++.|++|+++||++||++|+|++++|+++..+...++|+.||+|+.+|.+++.+ ..+++|+.+|+ +|+|+++++
T Consensus 159 ~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~-~~~n~da~~r~~~t~e~l~~~ 237 (400)
T TIGR02430 159 VDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEP-TVVDQDEHPRPETTLEGLAKL 237 (400)
T ss_pred cCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCc-eeeCCCCccCCCCCHHHHhcC
Confidence 5679999999999999999999999999999999999999999999999998765432 34788999998 999999999
Q ss_pred CCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcc
Q 015576 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 323 (404)
||+++++|++|++|||+++|||+|+||++++.+++++.+|+++|.|++.....+......+..+++++|+++|++++|||
T Consensus 238 ~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DID 317 (400)
T TIGR02430 238 KPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQFD 317 (400)
T ss_pred CCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHHHCC
Confidence 99999889999999999999999999999999999998888999999988766666666778999999999999999999
Q ss_pred eEeecccchHHHHHHHHHhCCCC--CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEE
Q 015576 324 YYEINEAFSVVAIANQKLLGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lg~~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll 401 (404)
++|+||+|+.+.+.+.|.||+++ .|+|++||.+++|||.|+||+++++|+++||+++++++||+++|++||+|.++||
T Consensus 318 ~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~~~~c~~gG~g~a~~~ 397 (400)
T TIGR02430 318 VIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERSGGRYALCTMCIGVGQGIALAI 397 (400)
T ss_pred CcccCcHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccChhhEEEE
Confidence 99999999999999999999976 5999999999999999999999999999999999999999999999999999999
Q ss_pred EeC
Q 015576 402 ELM 404 (404)
Q Consensus 402 ~~~ 404 (404)
|++
T Consensus 398 e~~ 400 (400)
T TIGR02430 398 ERV 400 (400)
T ss_pred EeC
Confidence 974
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-68 Score=521.09 Aligned_cols=384 Identities=34% Similarity=0.548 Sum_probs=338.9
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCCCCcc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~~~~~ 91 (404)
++|||||++||||+++.+.+.+.++.+|+.+|++++|+++++++++||.+++|+..+.. .+++.++......|++.++|
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP 81 (390)
T PRK06504 2 AEAYIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVP 81 (390)
T ss_pred CceEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc
Confidence 68999999999999988889999999999999999999999999999999999987533 34678888888789976899
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhh-hcCCCCCCccccccccccccccccc--cccH
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA-RKGSRLGHDTIVDGMLKDGLWDVYN--DFGM 168 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 168 (404)
.++|+.+|+||+.|+..|+++|++|.+|++||+|+|+||+.|...... +.+..++. ...+++.+++. ...|
T Consensus 82 ~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 155 (390)
T PRK06504 82 GTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGH------YKSPGMEERYPGIQFSQ 155 (390)
T ss_pred eEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCcccccccccccccccc------ccccccccccCCCCCCH
Confidence 999999999999999999999999999999999999999877532211 11111111 01122333221 2367
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCc
Q 015576 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (404)
Q Consensus 169 ~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~ 247 (404)
+..+++|+++||++||++|+|++++|+|+.+|+.++.|++||+|+++++++++| ..+..||.+|+ +|+|+|+++||++
T Consensus 156 ~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~-~~~~~De~~r~~~t~e~l~~~~~~~ 234 (390)
T PRK06504 156 FTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSG-EMHTVDEGIRFDATLEGIAGVKLIA 234 (390)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCc-eEEccCCCCCCCCCHHHHhcCCCCC
Confidence 778999999999999999999999999999999999999999999987766677 45789999999 9999999999996
Q ss_pred CCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEee
Q 015576 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEI 327 (404)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~ 327 (404)
.+|++|++|||+++|||+|+||++++.+++++.+|..+|.+++....++..+...+..+++++|+++|++++|||++|+
T Consensus 235 -~~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei 313 (390)
T PRK06504 235 -EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEV 313 (390)
T ss_pred -CCCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4589999999999999999999999999999988877999988877666566678889999999999999999999999
Q ss_pred cccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 328 NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 328 hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
||+|+++.+.++|.|||+++|+|++||++++|||+|+||++++.++++|||++.+++|++++|++||.+.++|||++
T Consensus 314 ~d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~~~~~gl~~~~~ggg~g~a~ile~~ 390 (390)
T PRK06504 314 NEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQRGKRYGLQTMCEGGGMANVTIVERL 390 (390)
T ss_pred cccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhhCCCeEEEEEeecccceeEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999974
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-68 Score=521.17 Aligned_cols=386 Identities=37% Similarity=0.563 Sum_probs=337.5
Q ss_pred CCCCCceEEEeeccCcccc-CCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCC
Q 015576 9 SIKARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAG 85 (404)
Q Consensus 9 ~~~~~~v~ivg~~~t~~~~-~~~~~~~~~~~~l~~~A~~~AL~~a-gi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lG 85 (404)
++.|++|||||++||||++ +.+.+++.+..+|+.+|+++||+++ |+++++||.+++|++.++.. +.+.++.+...+|
T Consensus 2 ~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~G 81 (399)
T PRK09052 2 SKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAG 81 (399)
T ss_pred CCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcC
Confidence 3445889999999999999 6788889999999999999999997 99999999999999886553 4566666777789
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
++...|+++|+++|+|++.|+..|+.+|++|.+|+|||+|+|++|+.|..... +. .+...++........
T Consensus 82 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~------~~----~~~~~~~~~~~~~~~ 151 (399)
T PRK09052 82 LPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNK------PS----MSPAIFARDENVGIA 151 (399)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcc------cc----cCcchhccCCccccc
Confidence 97448999999999999999999999999999999999999999987731100 00 000000100000112
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCC-----CCC---CceeeccCCcccc-CC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG-----RGK---PFIIVDKDEGLEK-FD 236 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~-----~~~---p~~~~~~d~~~~~-~~ 236 (404)
..|++.|++|+++||+|||++|+|++++|+|+.+||.+++|+.+|+|+++... ++. ...++..|+.+|+ .|
T Consensus 152 ~~~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~ 231 (399)
T PRK09052 152 YGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTS 231 (399)
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCC
Confidence 47999999999999999999999999999999999999999999999987543 111 1124789999999 99
Q ss_pred HHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcC
Q 015576 237 AAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAG 316 (404)
Q Consensus 237 ~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~ag 316 (404)
.|.|.+++|+|.++|++|++|||+++|||+++||++++.+++++.+|+++|.+++.....|..+...+..+++++|+++|
T Consensus 232 ~e~l~~l~p~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Ag 311 (399)
T PRK09052 232 LEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAG 311 (399)
T ss_pred HHHHhcCCCccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcC
Confidence 99999999999888999999999999999999999999999999999899999999988887777788999999999999
Q ss_pred CCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccce
Q 015576 317 LEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGA 396 (404)
Q Consensus 317 l~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~ 396 (404)
++++|||++|+||+|+++.+.++|.||+++.|+|++||.+++|||.|+||+++++++++||+++++++|++++|++||+|
T Consensus 312 i~~~did~~ei~D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~~~~~g~~~~c~~gg~g 391 (399)
T PRK09052 312 LKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNLKYGMVTMCVGTGMG 391 (399)
T ss_pred CCHHHcCEEEeCcHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEeC
Q 015576 397 SALVLELM 404 (404)
Q Consensus 397 ~a~ll~~~ 404 (404)
.|+|||+.
T Consensus 392 ~a~~~e~~ 399 (399)
T PRK09052 392 AAGIFERL 399 (399)
T ss_pred eEEEEEeC
Confidence 99999974
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-68 Score=519.31 Aligned_cols=380 Identities=34% Similarity=0.486 Sum_probs=334.1
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCCcc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~~~ 91 (404)
++|||||++||||+|+.+.+.+.++.+|+.++++++|+++|+++++||.+++|+..+... +.+.++.++..+|++...|
T Consensus 2 ~~V~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p 81 (387)
T PRK07850 2 GNPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVG 81 (387)
T ss_pred CcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCc
Confidence 689999999999999888888999999999999999999999999999999999875443 3667889999999986799
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHH
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (404)
+++|+++|+||+.|+..|++.|++|.+|++||+|+|+||+.|.... .+..++... + .+ ++ +....|+..
T Consensus 82 ~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~---~~~~~~~~~--~---~~--~~-~~~~~m~~~ 150 (387)
T PRK07850 82 ATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGAN---AGPGRGLPR--P---DS--WD-IDMPNQFEA 150 (387)
T ss_pred eEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCccccc---ccccccCcc--c---cc--cc-cCcchHHHH
Confidence 9999999999999999999999999999999999999999774221 011111000 0 00 11 111346678
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecC--CCCCCc---eeeccCCccccCCHHHHhcCCCC
Q 015576 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSS--GRGKPF---IIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 172 a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~--~~~~p~---~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
|++|+++||++||++|+|++++|+|+.++...++|++||+|+.++. ++++|+ ..++.|+.+|.+|.|+|.+++|+
T Consensus 151 ae~~~~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~ 230 (387)
T PRK07850 151 AERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPV 230 (387)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCC
Confidence 9999999999999999999999999999999999999999998764 221222 23789999999999999999998
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEe
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~ 326 (404)
+ .+|.+|++|||+++|||+|+||++++.+++++.+|.++|.+++.....+......+..+++++|+++|++++|||++|
T Consensus 231 ~-~~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~e 309 (387)
T PRK07850 231 L-EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVE 309 (387)
T ss_pred C-CCCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeee
Confidence 8 567789999999999999999999999999998888999999987766666677889999999999999999999999
Q ss_pred ecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 327 INEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 327 ~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+||+|+++.+..+|.||++.+|+|++||.+++|||.|+||+++++|+++||+.+++++||+++|++||+|.++|||++
T Consensus 310 i~d~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 310 INEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGALSTGTIIERI 387 (387)
T ss_pred ecccchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCceeEEEEEeC
Confidence 999999999999999999988999999999999999999999999999999999999999999999999999999974
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-67 Score=520.79 Aligned_cols=385 Identities=35% Similarity=0.562 Sum_probs=333.7
Q ss_pred CceEEEeeccCccccC------CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCC
Q 015576 13 RDVCIVGVARTPMGGF------LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAG 85 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~------~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lG 85 (404)
++|||||++||||+++ .+.+++.++.+|+.+|+++||+++|+++++||.+++|+..++.. +.+.+.......+
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~ 81 (394)
T PRK06445 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR 81 (394)
T ss_pred CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence 6899999999999986 37788999999999999999999999999999999999887543 3445555445555
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
++.+.|+++|+.+|+|++.++..|+++|++|.+|++||+|+|++++.|.. ....... ......++.. .. ++.+..
T Consensus 82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~-~~~~~~~--~~~~~~~~~~-~~-~~~~~~ 156 (394)
T PRK06445 82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMG-DNPHIEP--NPKLLTDPKY-IE-YDLTTG 156 (394)
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccc-cCccccC--Chhhcccccc-Cc-ccccCC
Confidence 55578999999999999999999999999999999999999999986642 1100000 0000111111 11 111222
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLR 244 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~ 244 (404)
..|++.|++|+++||+|||++|+|++++|+|+.+|...++|+++|+|+++. .++.+ .++++|+.+|+ +|+|++++++
T Consensus 157 ~~~a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~~~~~-~~~npda~~r~~~t~e~~~~~~ 234 (394)
T PRK06445 157 YVMGLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE-VEGKK-KVVDVDQSVRPDTSLEKLAKLP 234 (394)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec-CCCCc-eeeCCCCCCCCCCCHHHHhcCC
Confidence 459999999999999999999999999999999999999999999999984 45555 45789999998 9999999999
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcce
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 324 (404)
|+++++|++|++|||+++|||+|+||++++.+++++.+|+++|.|++....++......+..+++++|+++|++++|||+
T Consensus 235 ~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~ 314 (394)
T PRK06445 235 PAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDIDL 314 (394)
T ss_pred CccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcCE
Confidence 99998899999999999999999999999999999999989999999998777666677889999999999999999999
Q ss_pred EeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 325 YEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+|+||+|+++++.++|.|||+++|+|++||++++|||.|+||+++++++++||+.+++++||++.|++||+|.++|||++
T Consensus 315 ~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~~~~gg~g~a~~~e~~ 394 (394)
T PRK06445 315 WEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGKDYGVATLCVGGGQGGAVVLERV 394 (394)
T ss_pred EEecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhcCCCEEEEEEcccCChhhEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999988889999999999999999999974
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-67 Score=519.27 Aligned_cols=390 Identities=37% Similarity=0.537 Sum_probs=339.7
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCCCCc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSV 90 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~~~~ 90 (404)
|++|||||+.||||+++.+.+++.++.+|+.+|+++||+++|+++++||.+++|++.+.. .+++.+++++..+|++..+
T Consensus 1 ~~~v~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~ 80 (401)
T PRK08131 1 MLDAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV 80 (401)
T ss_pred CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence 368999999999999988888899999999999999999999999999999999987654 3577888899999998779
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCc-ccccccc-----ccccccccc
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDGML-----KDGLWDVYN 164 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~ 164 (404)
|+++|+++|+||+.|+..|+.+|++|.+|++||+|+|++|+.|...... +..++.. ..++... ...+.+.+.
T Consensus 81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (401)
T PRK08131 81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKA--ESAFSRDAKVFDTTIGARFPNPKIVAQYG 158 (401)
T ss_pred ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCccccccc--ccccccCcchhhhhhcccccCcccccccc
Confidence 9999999999999999999999999999999999999999877522111 0011100 0011110 011112233
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcC
Q 015576 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (404)
Q Consensus 165 ~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~ 243 (404)
...|++.|++|+++||+|||++|+|++++++++..+.+.++|+.+++|+++++....+...+..||.+|+ .|+|.|.++
T Consensus 159 ~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l 238 (401)
T PRK08131 159 NDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKL 238 (401)
T ss_pred cCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcC
Confidence 4579999999999999999999999999999999888888999999999987644333234889999999 999999999
Q ss_pred CCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcc
Q 015576 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 323 (404)
||++ ++|++|++|||+++|||+|+||++++.+++++.+|+++|.+++...+.+..+...+..+++++|+++|++++|||
T Consensus 239 ~p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did 317 (401)
T PRK08131 239 KPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDDMD 317 (401)
T ss_pred CCCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCC
Confidence 9999 579999999999999999999999999999998998999999999877766667889999999999999999999
Q ss_pred eEeecccchHHHHHHHHHhCCC--CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEE
Q 015576 324 YYEINEAFSVVAIANQKLLGLD--PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lg~~--~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll 401 (404)
++|+||+|+++++.++|.|||+ ..|+|++||.+++|||.||||+++++|+++||+++++++++..+|.+||+|.|+||
T Consensus 318 ~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~~~~~~~~~~~ggg~g~a~i~ 397 (401)
T PRK08131 318 IIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRGKRYAVVSLCIGVGQGLAMVI 397 (401)
T ss_pred eehhccHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcCCCceEEEEEecCChhhEEEE
Confidence 9999999999999999999997 45899999999999999999999999999999999999999999999999999999
Q ss_pred EeC
Q 015576 402 ELM 404 (404)
Q Consensus 402 ~~~ 404 (404)
|++
T Consensus 398 e~~ 400 (401)
T PRK08131 398 ERV 400 (401)
T ss_pred Eec
Confidence 974
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-67 Score=518.24 Aligned_cols=380 Identities=41% Similarity=0.608 Sum_probs=336.0
Q ss_pred CceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCCc
Q 015576 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~~ 90 (404)
++|||||++||||+++ .+.+.+.++.+|+.+|+++||+++|+.+++||.+++|+..++.. +++.+++++..+|++...
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~ 81 (391)
T PRK07661 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV 81 (391)
T ss_pred CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence 5799999999999986 67788999999999999999999998789999999998876543 577788899999997558
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|+++|+++|+||+.++..|+.+|++|.+|++||+|+|++++.|..... +... ....+ . .+.....|++
T Consensus 82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~------~~~~----~~~~~-~-~~~~~~~m~~ 149 (391)
T PRK07661 82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHV------VRPN----PRLVE-A-APEYYMGMGH 149 (391)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccc------cCCC----ccccc-c-ccchhhhHHH
Confidence 999999999999999999999999999999999999999987642100 0000 00000 0 1111234899
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCC----CCCC---ceeeccCCcccc-CCHHHHhc
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG----RGKP---FIIVDKDEGLEK-FDAAKLMK 242 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~----~~~p---~~~~~~d~~~~~-~~~~~~~~ 242 (404)
.|++|+++||+|+|++|+|++++|+|+..||.+++|+.+|+|+++++. ++++ .+++++||.+|+ .+.|.+.+
T Consensus 150 ~a~~~~~~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~ 229 (391)
T PRK07661 150 TAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGK 229 (391)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhc
Confidence 999999999999999999999999999999999999999999998753 1211 146899999999 99999999
Q ss_pred CCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCc
Q 015576 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 322 (404)
++|++..+|++|++|||+++|||+|+||++++.+++++.+|+++|.+++.....+..+...+..+++++|+++|++++||
T Consensus 230 l~p~f~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~di 309 (391)
T PRK07661 230 LRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDI 309 (391)
T ss_pred CCCCcCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHHC
Confidence 99998778999999999999999999999999999999999899999999988777666678899999999999999999
Q ss_pred ceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
|++|+||+|+.+++..+|.||++++|+|++||++++|||.|+||+++++++++||+.+++++|++++|++||+|.|+|||
T Consensus 310 d~~ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~~~~~g~~~~c~~gg~g~a~~~e 389 (391)
T PRK07661 310 GLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGMGAAGVFE 389 (391)
T ss_pred CEEEeCCHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhhEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eC
Q 015576 403 LM 404 (404)
Q Consensus 403 ~~ 404 (404)
+.
T Consensus 390 ~~ 391 (391)
T PRK07661 390 LL 391 (391)
T ss_pred eC
Confidence 74
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-69 Score=484.09 Aligned_cols=393 Identities=64% Similarity=0.940 Sum_probs=378.3
Q ss_pred CCCCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCC
Q 015576 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (404)
Q Consensus 9 ~~~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~ 88 (404)
+.++++||||++.|||++-+++++...+..+|+..|++.||+++.+++++++.+|+|++.+...|++++++.+...|||.
T Consensus 2 ~~~~k~V~IVsaARTPIGsF~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~ 81 (396)
T KOG1390|consen 2 SLSSKDVFIVSAARTPIGSFRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPY 81 (396)
T ss_pred CCCCCceEEEeeccccccccccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCc
Confidence 34577999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccH
Q 015576 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (404)
Q Consensus 89 ~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (404)
..++.+++..|+|++.|+..|++.|+.|..|+++++|.|+||++| +....|.+.++|.....|.+..||++|.|....|
T Consensus 82 sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP-~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~M 160 (396)
T KOG1390|consen 82 SVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVP-YLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHM 160 (396)
T ss_pred ceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCc-chhhhccCcCcCCeeeeechhhcchHHHhccCCc
Confidence 999999999999999999999999999999999999999999999 5555688899999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCc
Q 015576 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (404)
Q Consensus 169 ~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~ 247 (404)
+..+++..++|+||||++|.|++.+++++..+++++.|.+||+||+++.+++. .++++||.+++ .+.+++...+++|
T Consensus 161 G~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~--~~v~~DEe~~k~~~~~~~~~l~~vF 238 (396)
T KOG1390|consen 161 GICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGE--TVVKKDEEPKKGSNIEKLSKLRPVF 238 (396)
T ss_pred chhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCc--EEeccchhhhcccchhhhcccccee
Confidence 99999999999999999999999999999999999999999999999999995 47999999999 9999999999998
Q ss_pred C-CCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEe
Q 015576 248 K-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (404)
Q Consensus 248 ~-~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~ 326 (404)
- .+|.+|..+++.+.|||+|+||++.+.+++++.+|+++|.+|+.+...|.++..+|..++.++|+++||..+|||++|
T Consensus 239 ~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdVd~~E 318 (396)
T KOG1390|consen 239 KEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDVDYWE 318 (396)
T ss_pred ecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhhhHHh
Confidence 4 567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 327 INEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 327 ~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
++++|+...+...+.||++++++|++||..++|||.|+||.+.+..+++.|+.+++++|++.+|+|||.+++|+||++
T Consensus 319 iNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~~~g~~GvAaiCnGGGgasa~viekl 396 (396)
T KOG1390|consen 319 INEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQKGGKIGVAAICNGGGGASAMVIEKL 396 (396)
T ss_pred hhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHhhCCceeEEEEecCCCceeeEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999974
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-67 Score=516.00 Aligned_cols=378 Identities=39% Similarity=0.580 Sum_probs=336.2
Q ss_pred CceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCC
Q 015576 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~-agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~ 89 (404)
++|||||+++|||+++ .+++++..+.+|+.++++++|++ +|+++++||.+++|+..+... +.+.+++++..+|++..
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~ 81 (387)
T PRK08947 2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHS 81 (387)
T ss_pred CcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 6899999999999985 67889999999999999999995 799999999999999875444 57788889999999866
Q ss_pred cceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHH
Q 015576 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (404)
Q Consensus 90 ~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (404)
.|+++|+++|+||+.++..|+.+|++|.+|++||+|+|++|+.|..... .+ ++.+.+.+ ...+..|+
T Consensus 82 ~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~-----~~------~~~~~~~~--~~~~~~~~ 148 (387)
T PRK08947 82 VPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGV-----DF------HPGLSKNV--AKAAGMMG 148 (387)
T ss_pred CcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCcccccc-----Cc------chhhhhhc--cccchHHH
Confidence 9999999999999999999999999999999999999999987642110 00 11111111 11135799
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcC
Q 015576 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFK 248 (404)
Q Consensus 170 ~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~ 248 (404)
+.|++|+++||++||++|+|++++|+|+.+|...+.|++||+|+.++++++.+ ..+++|+.+|+ +|+|+|+++||+++
T Consensus 149 ~~a~~~~~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~ 227 (387)
T PRK08947 149 LTAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVL-KLFDYDEVIRPETTVEALAALRPAFD 227 (387)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCc-eeecCCCCCcCCCCHHHHhcCCceee
Confidence 99999999999999999999999999999999999999999999988766555 45789999998 99999999999998
Q ss_pred C-CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEee
Q 015576 249 E-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEI 327 (404)
Q Consensus 249 ~-~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~ 327 (404)
+ +|.+|++|||+++|||+|+||++++.+++++.+|+++|.+++....++......+..+++++|+++|++++|||++|+
T Consensus 228 p~~g~lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El 307 (387)
T PRK08947 228 PVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFEL 307 (387)
T ss_pred CCCCcEEccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 6 677999999999999999999999999999988889999999987666555556789999999999999999999999
Q ss_pred cccchHHHHHHHHHhCCCC---CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 328 NEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 328 hd~~~~~~~~~~e~lg~~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
||+|+++++.++|.|||++ +|+|++||++++|||.|+||++++.++++||+++++++|+++.|+|||+|.++|||++
T Consensus 308 ~d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~~~~~g~G~g~a~~~e~~ 387 (387)
T PRK08947 308 NEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_pred cccchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCEEEEEEeecccceeEEEEEeC
Confidence 9999999999999999987 4999999999999999999999999999999998889999999999999999999974
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-67 Score=519.81 Aligned_cols=381 Identities=37% Similarity=0.589 Sum_probs=331.5
Q ss_pred CCceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCC
Q 015576 12 ARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~ 89 (404)
.++|||||+++|||+++ .+.+.+.++.+|+.+|+++||+++|+++++||.+++|+..+... +++.+..++..+|++..
T Consensus 45 ~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~ 124 (452)
T PLN02287 45 GDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPET 124 (452)
T ss_pred CCCEEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCC
Confidence 45799999999999985 56677899999999999999999999999999999999876553 34566778888999756
Q ss_pred cceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHH
Q 015576 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (404)
Q Consensus 90 ~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (404)
.|+++|+.+|+|++.++..|+.+|++|.+|+|||+|+|+++..|..... .+... +.. .+...+ ....|+
T Consensus 125 ~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~-----~~~~~--~~~--~~~~~~--~~~~~g 193 (452)
T PLN02287 125 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEG-----GVNPR--VES--FSQAQD--CLLPMG 193 (452)
T ss_pred cceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhcc-----ccCch--hhc--cccccc--cCcCHH
Confidence 8999999999999999999999999999999999999999987632110 01000 000 011111 123599
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecC-----CCCCCceeeccCCcccc-CCHHHHhcC
Q 015576 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSS-----GRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (404)
Q Consensus 170 ~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~-----~~~~p~~~~~~d~~~~~-~~~~~~~~~ 243 (404)
+.+++|+++||+++|++|+|++++|+|+.+||.+++|+.+|+|+.++. ...+| +.++.|+.+|+ ++.|++.++
T Consensus 194 ~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~-~~~~~De~~r~~~~~e~l~~l 272 (452)
T PLN02287 194 ITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKP-IVISVDDGIRPNTTLADLAKL 272 (452)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccc-eeecccCCCCCCCCHHHHhcC
Confidence 999999999999999999999999999999999999999999998753 11122 34889999998 999999999
Q ss_pred CCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcc
Q 015576 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 323 (404)
||+++++|++|++|||+++|||+|+||++++.+++++.+|++++.+++....++..+...+..+++++|+++|++++|||
T Consensus 273 ~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID 352 (452)
T PLN02287 273 KPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDID 352 (452)
T ss_pred CCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCC
Confidence 99998889999999999999999999999999999998899999998876555655555778999999999999999999
Q ss_pred eEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCC--ceeEEeeeccccceeeeEE
Q 015576 324 YYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG--KYGVGGICNGGGGASALVL 401 (404)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~--~~gl~~~~~~gG~~~a~ll 401 (404)
++|+||+|+++.+.++|.||+++.|+|++||++++|||.||||+++++++++||+.+++ ++||+++|++||+|.|+||
T Consensus 353 ~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG~g~a~~i 432 (452)
T PLN02287 353 LFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVF 432 (452)
T ss_pred EEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccCceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999998888 9999999999999999999
Q ss_pred EeC
Q 015576 402 ELM 404 (404)
Q Consensus 402 ~~~ 404 (404)
|++
T Consensus 433 e~~ 435 (452)
T PLN02287 433 ERG 435 (452)
T ss_pred Eec
Confidence 974
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-67 Score=520.04 Aligned_cols=388 Identities=37% Similarity=0.503 Sum_probs=331.5
Q ss_pred CCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc
Q 015576 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~ 90 (404)
|+++|+|||+++|||+++.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+.....+.+..++..+|++.+.
T Consensus 1 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~ 80 (426)
T PRK08170 1 MARPVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKV 80 (426)
T ss_pred CCCcEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCc
Confidence 67899999999999999776677789999999999999999999999999999998876444456788899999996568
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhh--h----c------CCCCCCcccccccc---
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA--R----K------GSRLGHDTIVDGML--- 155 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~--~----~------~~~~~~~~~~~~~~--- 155 (404)
|.++++.+|+|++.++..|+++|++|.+|+|||+|+|++|..|...... + . +..++....+...+
T Consensus 81 p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (426)
T PRK08170 81 PAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAP 160 (426)
T ss_pred eeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccccccccc
Confidence 9999999999999999999999999999999999999998866421110 0 0 00000000000000
Q ss_pred ----ccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCc
Q 015576 156 ----KDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG 231 (404)
Q Consensus 156 ----~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~ 231 (404)
..++.+++.+..|++.|++|+++||+|||++|+|++++|+|+.++.+.+.|+ +|+||+. ++++| +.+||.
T Consensus 161 ~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~--~~~np---~a~de~ 234 (426)
T PRK08170 161 VIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFD--RDGKF---YDHDDG 234 (426)
T ss_pred ccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeec--CCCCe---eccCCC
Confidence 0233333334589999999999999999999999999999999888888898 9999982 33357 889999
Q ss_pred ccc-CCHHHHhcCCCCcC-CCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHH
Q 015576 232 LEK-FDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIP 309 (404)
Q Consensus 232 ~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~ 309 (404)
+|+ +|+|+|+++||+++ +.|++|++|||+++|||+|+||++++.|++++.+|.++|.+++.....|..+..+++.+++
T Consensus 235 ~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~ 314 (426)
T PRK08170 235 VRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGPVHAAT 314 (426)
T ss_pred CCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccHHHHHH
Confidence 999 99999999999998 6688999999999999999999999999999999988999999887777666667889999
Q ss_pred HHHHHcCCCCCCcceEeecccchHHHHHHHH---HhCCCC--------------CCcCCCCCccccCCcccchHHHHHHH
Q 015576 310 KAIANAGLEASQIDYYEINEAFSVVAIANQK---LLGLDP--------------EQVNAHGGAVSLGHPLGCSGARILVT 372 (404)
Q Consensus 310 ~al~~agl~~~dId~~~~hd~~~~~~~~~~e---~lg~~~--------------~~vn~~Gg~~~~Gh~~gasG~~~l~~ 372 (404)
++|+++|++++|||++|+||+|+.+++..++ .+|||+ .|+|++||.+++|||+||||++++.+
T Consensus 315 ~al~~aGl~~~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~ 394 (426)
T PRK08170 315 PLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLH 394 (426)
T ss_pred HHHHHcCCCHHHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHH
Confidence 9999999999999999999999999996665 666654 48999999999999999999999999
Q ss_pred HHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 373 LLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 373 ~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+++||++..+++|++++|++||+|.|+||||+
T Consensus 395 l~~~l~~~~~~~g~~~~c~~gg~g~a~~~e~~ 426 (426)
T PRK08170 395 LLHALKRRGTKRGIAAICIGGGQGGAMLLERV 426 (426)
T ss_pred HHHHHHhhCCCeEEEEEecCCChhheEEEEeC
Confidence 99999999999999999999999999999985
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-67 Score=514.88 Aligned_cols=385 Identities=54% Similarity=0.820 Sum_probs=337.3
Q ss_pred EEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeE
Q 015576 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI 95 (404)
Q Consensus 16 ~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v 95 (404)
+|+|+++|||+++.+.+++++..+|+.+|+++||+++|+++++||.+++++..+...++..+.+++..+|++.+.|++++
T Consensus 1 ~Ivg~~~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v 80 (386)
T cd00751 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV 80 (386)
T ss_pred CEEEeecCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh
Confidence 59999999999988778889999999999999999999999999999999887766667778889999999744789999
Q ss_pred cccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHH
Q 015576 96 NKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (404)
Q Consensus 96 ~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (404)
+.+|+|++.+|..|+.+|++|.+|+|||+|+|++|..|......+.+...+... ...+...++..++....|++.+++|
T Consensus 81 ~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~a~~~ 159 (386)
T cd00751 81 NRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNT-LDGMLDDGLTDPFTGLSMGITAENV 159 (386)
T ss_pred ccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccc-cccccccccccccCCCCHHHHHHHH
Confidence 999999999999999999999999999999999987664322211111111000 0111123333444457799999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCCCccc
Q 015576 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGGSVT 254 (404)
Q Consensus 176 ~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~g~~~ 254 (404)
|++||+++|++++|++++|+|+..|++.+.+..+++|+.++.++.. ..+++++.+|+ +|+|+|++++|++++.|++|
T Consensus 160 ~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~ 237 (386)
T cd00751 160 AEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGP--VVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVT 237 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCC--eEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEe
Confidence 9999999999999999999999999999999999999987654222 24678889988 99999999999999888899
Q ss_pred cCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccchHH
Q 015576 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV 334 (404)
Q Consensus 255 ~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~ 334 (404)
++|||+++|||+++||++++.+++++.+++++|.|++...+.+......+..+++++|+++|++++|||++|+||+|++.
T Consensus 238 ~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~ 317 (386)
T cd00751 238 AGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQ 317 (386)
T ss_pred CCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEeechhHHH
Confidence 99999999999999999999999999999899999999987776666677899999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 335 AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 335 ~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.+.+.|.||+++.|+|++||++++|||.|++|+.+++|+++||+++++++||+++|++||+|.++|||+
T Consensus 318 ~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 318 ALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred HHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhcCCCEEEEEEcccccceEEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-67 Score=519.65 Aligned_cols=387 Identities=30% Similarity=0.482 Sum_probs=332.0
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|||||++||||+++.+.+++.++.+|+.+|+++||+++|+++++||.+++|++.+...++++++.++..+|++..+|+
T Consensus 5 ~~v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~ 84 (428)
T PRK08963 5 DRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDA 84 (428)
T ss_pred CeEEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcc
Confidence 47999999999999987888899999999999999999999999999999999987655567788889999999866899
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhh--h------cCCCCCCcc-c-----ccc-c-cc
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA--R------KGSRLGHDT-I-----VDG-M-LK 156 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~--~------~~~~~~~~~-~-----~~~-~-~~ 156 (404)
++|+++|+||+.|+..|+++|++|.+|+|||+|+|++|+.|...... + ....++... . ... + ..
T Consensus 85 ~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (428)
T PRK08963 85 YSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVP 164 (428)
T ss_pred eeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccC
Confidence 99999999999999999999999999999999999999877432110 0 000001000 0 000 0 00
Q ss_pred cccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-C
Q 015576 157 DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-F 235 (404)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~ 235 (404)
..+.++.....|++.|++|+++||+|+|++|+|++++|+|+..|.+.+.|.+||+|++++..+ . .++.|+.+|+ +
T Consensus 165 ~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a-~---~~~~D~~~r~~~ 240 (428)
T PRK08963 165 PAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK-Q---PLEEDNNIRGDS 240 (428)
T ss_pred cccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCc-e---eeCCCCCCCCCC
Confidence 111111112469999999999999999999999999999999999999999999999875332 1 2889999998 9
Q ss_pred CHHHHhcCCCCcCC-CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC-ccccchHHHHHHHHH
Q 015576 236 DAAKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-WFTTAPSLAIPKAIA 313 (404)
Q Consensus 236 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~-~~~~~~~~a~~~al~ 313 (404)
|+|+|+++||++++ +|++|++|||+++|||+|+||++++.+++++.+|.++|.+++....++. .+...+..+++++|+
T Consensus 241 t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~a~~~al~ 320 (428)
T PRK08963 241 TLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYATPLALE 320 (428)
T ss_pred CHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHHHHHHHHH
Confidence 99999999999973 5889999999999999999999999999999999889999998764442 234556789999999
Q ss_pred HcCCCCCCcceEeecccchHHHHHHHHHhC-----------------CCCCCcCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 314 NAGLEASQIDYYEINEAFSVVAIANQKLLG-----------------LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 314 ~agl~~~dId~~~~hd~~~~~~~~~~e~lg-----------------~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
++|++++|||++|+||+|+++++.++|.|| ++.+|+|++||.+++|||.|+||+++++|+++|
T Consensus 321 ~AGl~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~~~q 400 (428)
T PRK08963 321 RAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHE 400 (428)
T ss_pred HcCCCHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHH
Confidence 999999999999999999999999999994 555699999999999999999999999999999
Q ss_pred HHhcCCceeEEeeeccccceeeeEEEe
Q 015576 377 LRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 377 l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
|+++++++||+++|++||+|.|+|||+
T Consensus 401 Lrg~~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 401 LRRRGGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred HhhcCCCEEEEEEccccChhhEEEEEe
Confidence 999999999999999999999999997
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-67 Score=511.47 Aligned_cols=377 Identities=38% Similarity=0.557 Sum_probs=333.2
Q ss_pred ceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCCc
Q 015576 14 DVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (404)
Q Consensus 14 ~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~-agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~~ 90 (404)
+|||||++||||+++ .+++++.++.+|+.+|++++|++ +|+++++||.+++|++.+... +.++++++....|++...
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 499999999999984 67888999999999999999996 699999999999999865443 567888888889998779
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|+++|+++|+||+.++..|+++|++|.+|++||+|+|+||+.|.... ..+ ++.+.+.+. ..+..|++
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~-----~~~------~~~~~~~~~--~~~~~~~~ 147 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHG-----VDF------HPGMSLHVA--KAAGMMGL 147 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccC-----CCc------chhHHhhhc--cccchHHH
Confidence 99999999999999999999999999999999999999998764211 000 000111111 11357999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCC
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~ 249 (404)
.|++|+++||++||++|+|++++|+|+.++..++.|++||+|++++..++.+ +.+++|+.+|+ +|+|+++++||++++
T Consensus 148 ~a~~~~~~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~p 226 (385)
T TIGR02445 148 TAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFL-KQFDYDEVIRPETTVESLAALRPAFDP 226 (385)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCc-eeeCCCCCCCCCCCHHHHhcCCceecC
Confidence 9999999999999999999999999999999999999999999987665544 45889999999 999999999999986
Q ss_pred -CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeec
Q 015576 250 -GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (404)
Q Consensus 250 -~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~h 328 (404)
+|.+|++|||+++|||+++||++++.+++++.+|+++|.+++....++..+...+..+++++|+++|++++|||++|+|
T Consensus 227 ~~g~lt~~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~ 306 (385)
T TIGR02445 227 KNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELN 306 (385)
T ss_pred CCCceecccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEc
Confidence 6779999999999999999999999999999899899999999876665555577899999999999999999999999
Q ss_pred ccchHHHHHHHHHhCCCC---CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 329 EAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 329 d~~~~~~~~~~e~lg~~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
|+|+++++.++|.|||++ .|+|++||.+++|||.||||++++.++++.++.+++++||+++|+|||+|.|+|||++
T Consensus 307 daFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~~~~~Gl~~~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 307 EAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDATFGLATMCIGLGQGIATVFERV 385 (385)
T ss_pred cccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCeEEEEEecccChhheEEEEeC
Confidence 999999999999999987 5999999999999999999999999999777777788999999999999999999974
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-66 Score=509.39 Aligned_cols=392 Identities=84% Similarity=1.295 Sum_probs=339.4
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|+|||+++|||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+......+++.++.++..+|++.+.|+
T Consensus 1 ~~v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~ 80 (394)
T PLN02644 1 RDVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTIC 80 (394)
T ss_pred CcEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCce
Confidence 46999999999999987778889999999999999999999999999999999876544456677778899999766899
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (404)
.+++.+|+|++.++..|+++|++|.+|+|||+|+|++++.|......+.+..++.....+......+++++....|++.|
T Consensus 81 ~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 160 (394)
T PLN02644 81 TTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCA 160 (394)
T ss_pred EEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHH
Confidence 99999999999999999999999999999999999999766422111111111111111111112333445445699999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCC-CC
Q 015576 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE-GG 251 (404)
Q Consensus 173 ~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~-~g 251 (404)
++|+++||+|+|++++|++++|+|+.+|++.+.|+.+|+|+++.+.+++|+.+++.|+.++..+.+.|..++|+|.+ +|
T Consensus 161 ~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g 240 (394)
T PLN02644 161 ELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGG 240 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCC
Confidence 99999999999999999999999999999999999999999887655665455788888877889999999999976 68
Q ss_pred ccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
.+|.+|||+++||++++||++++.+++++.+|+++|.|++...+.+......+..+++++|+++|++++|||++|+||+|
T Consensus 241 ~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~~Ei~d~f 320 (394)
T PLN02644 241 SVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYYEINEAF 320 (394)
T ss_pred cEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHH
Confidence 99999999999999999999999999999899899999999876654555567789999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+.+.+.++|.||+|++|+|++||++++|||.|+||+++++++++||+++++++|+.+.|++||+|.++|||++
T Consensus 321 ~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~~~~~g~~~~~~~gg~g~a~~~e~~ 393 (394)
T PLN02644 321 SVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNGKYGVAGICNGGGGASAIVVELM 393 (394)
T ss_pred HHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCceeEEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=500.50 Aligned_cols=384 Identities=32% Similarity=0.484 Sum_probs=345.3
Q ss_pred CceEEEeeccCccc--c-CCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCC
Q 015576 13 RDVCIVGVARTPMG--G-FLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN 88 (404)
Q Consensus 13 ~~v~ivg~~~t~~~--~-~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~ 88 (404)
++|+||+..||||+ + ..+.+.+.++.+|+..+++.+|++++++|++||.+|+|+..+... +++++++++...|+|.
T Consensus 2 ~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~ 81 (417)
T PRK06025 2 AEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDI 81 (417)
T ss_pred CceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCC
Confidence 57999999999998 8 479999999999999999999999999999999999999988664 7899999999999999
Q ss_pred CcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhh-hhhcCCCCCCcccccccccccccccccccc
Q 015576 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLA-EARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (404)
Q Consensus 89 ~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (404)
..|+++|+..|+||+.++..|+.+|++|.+|++|++|+|+||+.|+... ..+++. ..+..+.. .+++.+.+....
T Consensus 82 ~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~ 157 (417)
T PRK06025 82 KASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGK---PPLGMGSG-NLRLRALHPQSH 157 (417)
T ss_pred CCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCC---Cccccccc-CcccccccCCCC
Confidence 9999999999999999999999999999999999999999999997322 122221 11111211 234444444568
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCC
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~ 246 (404)
|+..|+++.++||||||++|+|++++|+++.++...+.|+.||+|++ . +++. +++++||.+|+ .|.|.|.++||+
T Consensus 158 Mg~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~-~-~~~~--~~~~~De~~R~~~t~e~la~L~p~ 233 (417)
T PRK06025 158 QGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVY-R-DDGS--VALDHEEFPRPQTTAEGLAALKPA 233 (417)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEE-c-CCCC--EEecCCCCCCCCCCHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999997 2 2222 35899999998 999999999999
Q ss_pred cC--------CCCc------------------cccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc
Q 015576 247 FK--------EGGS------------------VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300 (404)
Q Consensus 247 ~~--------~~g~------------------~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~ 300 (404)
|. ++|. +|..++|+++|||+|+||++++.+++++.+|+++|.+++...+++..+
T Consensus 234 F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~ 313 (417)
T PRK06025 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLM 313 (417)
T ss_pred ccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhh
Confidence 96 4787 899999999999999999999999999988999999999998887777
Q ss_pred ccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc
Q 015576 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 301 ~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
...+..+++++|+++|++++|||++|+||+|+.+.+..++.+|++.+|+|++||++++|||+|+||+++++++++||+.+
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~ 393 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERR 393 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 77788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCceeEEeeeccccceeeeEEEeC
Q 015576 381 KGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 381 ~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
++++|++++|++||+|.|+|||++
T Consensus 394 g~~~Gl~~~c~~GG~g~A~lle~~ 417 (417)
T PRK06025 394 GLKRGLVTMCAAGGMAPAIIIERV 417 (417)
T ss_pred CCCeEEEEEEeeccceeEEEEEeC
Confidence 889999999999999999999984
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-66 Score=510.06 Aligned_cols=387 Identities=30% Similarity=0.474 Sum_probs=332.3
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|||||++||||+++.+.+.+.++.+|+.++++++|+++++++++||.+++|++.+...+.++++.++...|++..+|+
T Consensus 7 ~~V~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~ 86 (430)
T TIGR02446 7 ERIAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDA 86 (430)
T ss_pred CCEEEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCch
Confidence 57999999999999988888899999999999999999999999999999999987755567789999999999867999
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhh--h------cCCCCCCcc------cccc-cccc
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA--R------KGSRLGHDT------IVDG-MLKD 157 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~--~------~~~~~~~~~------~~~~-~~~~ 157 (404)
++|+++|+||+.|+..|+.+|++|.+|++||+|+|+||+.|...... + ....++... .++. +...
T Consensus 87 ~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (430)
T TIGR02446 87 YSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVP 166 (430)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhcccC
Confidence 99999999999999999999999999999999999999877432110 0 000011000 0000 0001
Q ss_pred cccccc-ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-C
Q 015576 158 GLWDVY-NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-F 235 (404)
Q Consensus 158 ~~~~~~-~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~ 235 (404)
...+.+ +...|++.|++|+++||++||++|+|++++|+|+.++...+.|..+|+|+.++..+ ..+++|+.+|+ +
T Consensus 167 ~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a----~~~~~D~~~r~~~ 242 (430)
T TIGR02446 167 PAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYK----QWIAEDNNIRHNS 242 (430)
T ss_pred cccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCc----eEecccCCCCCCC
Confidence 111111 13469999999999999999999999999999999999999999999998754332 13789999998 9
Q ss_pred CHHHHhcCCCCcCC-CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-CccccchHHHHHHHHH
Q 015576 236 DAAKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-EWFTTAPSLAIPKAIA 313 (404)
Q Consensus 236 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-~~~~~~~~~a~~~al~ 313 (404)
|+|+|+++||++++ .|++|++|||+++|||+|+||++++.+++++.+|.++|.+++....++ ..+...+..+++++|+
T Consensus 243 t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~a~~~al~ 322 (430)
T TIGR02446 243 TLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSYATPLALQ 322 (430)
T ss_pred CHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHHHHHHHHH
Confidence 99999999999986 589999999999999999999999999999988888999999876555 2345566789999999
Q ss_pred HcCCCCCCcceEeecccchHHHHHHHHHhC-----------------CCCCCcCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 314 NAGLEASQIDYYEINEAFSVVAIANQKLLG-----------------LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 314 ~agl~~~dId~~~~hd~~~~~~~~~~e~lg-----------------~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
++|++++|||++|+||+|+++++.++|.|| ++.+|+|++||.+++|||.|+||+++++|+++|
T Consensus 323 ~Agl~~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v~e~~~q 402 (430)
T TIGR02446 323 RAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRE 402 (430)
T ss_pred HcCCCHHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHH
Confidence 999999999999999999999999999997 555599999999999999999999999999999
Q ss_pred HHhcCCceeEEeeeccccceeeeEEEe
Q 015576 377 LRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 377 l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
|+++++++|+...|++||+|.+++||+
T Consensus 403 L~g~ag~~g~~~~~~~GG~g~a~iie~ 429 (430)
T TIGR02446 403 LKRRGGGLGLNTACAAGGLGAAMILEV 429 (430)
T ss_pred HhhcCCCccEEEEEecCcceEEEEEEe
Confidence 999999999999999999999999996
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=505.36 Aligned_cols=384 Identities=51% Similarity=0.754 Sum_probs=332.2
Q ss_pred EEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc
Q 015576 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN 96 (404)
Q Consensus 17 ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~ 96 (404)
|||+++|||+|+.+.+.+++..+|+.+|+++||+|+|++++|||.+++++..+....+..+..++..+|++.+.|+++++
T Consensus 1 IvG~~~tp~~~~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~ 80 (386)
T TIGR01930 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN 80 (386)
T ss_pred CcceecCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec
Confidence 78999999999877788899999999999999999999999999999998876655566778899999997558999999
Q ss_pred ccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhh-hcCCCCCCccccccccccccccccccccHHHHHHHH
Q 015576 97 KVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA-RKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (404)
Q Consensus 97 ~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (404)
.+|+|++.+|..|+++|++|.+|+|||+|+|.++..+...... +....++.....+.....++.+++.+..|++.+++|
T Consensus 81 ~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y 160 (386)
T TIGR01930 81 RQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENL 160 (386)
T ss_pred chhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHH
Confidence 9999999999999999999999999999999988755322111 111111100000011223444444456799999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCCCccc
Q 015576 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGGSVT 254 (404)
Q Consensus 176 ~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~g~~~ 254 (404)
|++||+++|++++|++++|+|+..|.+.+.++.+++|..+++++ .+ +++.+|+.+|+ +|+|+++++||++++.|.+|
T Consensus 161 ~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~-~~-~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~ 238 (386)
T TIGR01930 161 AKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRK-GP-VTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVT 238 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCC-CC-eEeCCCCCCCCCCCHHHHhCCCCCcCCCCeee
Confidence 99999999999999999999999999999999999998765432 22 45788888888 99999999999999666699
Q ss_pred cCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccchHH
Q 015576 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV 334 (404)
Q Consensus 255 ~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~ 334 (404)
++|||+++|||+|+||++++.+++++.+|+++|.|++.....+.........+++++|+++|++++|||++|+||+|++.
T Consensus 239 ~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa~~ 318 (386)
T TIGR01930 239 AGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQ 318 (386)
T ss_pred CCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeehcchhHHH
Confidence 99999999999999999999999999998899999999876665555667899999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 335 AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 335 ~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
+++++|.||+...|+|++||++++|||.|++|+.+++++++||+++++++||+++|++||.|.++|||
T Consensus 319 ~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 319 VLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred HHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCceEEEEeC
Confidence 99999999998789999999999999999999999999999999999999999999999999999997
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-65 Score=501.96 Aligned_cols=380 Identities=36% Similarity=0.572 Sum_probs=336.5
Q ss_pred CceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCCc
Q 015576 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~~ 90 (404)
++|||||++||||+++ .+.++++++.+|+.+|+++||+++|+++++||.+++|+..+... +++.+++++..+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~ 81 (392)
T PRK07108 2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV 81 (392)
T ss_pred CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence 6899999999999985 56678999999999999999999999999999999999987664 457899999999998679
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|+++|+++|+|++.|++.|+.+|++|.+|++||+|+|+||+.|..... ..++ +.+..+...+.+ ..|+.
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~----~~~~-----~~~~~~~~~~~~--~~m~~ 150 (392)
T PRK07108 82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNR----HMLR-----EGWLVEHKPEIY--WSMLQ 150 (392)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCC----cCcc-----chhhhccCCccc--cCHHH
Confidence 999999999999999999999999999999999999999987642210 0110 000101000111 35788
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCC--------ceeeccCCcccc-CCHHHHh
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKP--------FIIVDKDEGLEK-FDAAKLM 241 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p--------~~~~~~d~~~~~-~~~~~~~ 241 (404)
.++++..+|+++|+++++|+..+++++..+.+++.|++||+|+..+....+| .+.+++||.+|+ +|+|+|.
T Consensus 151 ~ae~~a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~ 230 (392)
T PRK07108 151 TAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVS 230 (392)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHh
Confidence 8899999999999999999999999999999999999999999775322122 245899999999 9999999
Q ss_pred cCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCC
Q 015576 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQ 321 (404)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 321 (404)
+++|++ ..|++|++|||+++|||+|+||++++.+++++.+|+++|.|++...+.|+.+..++..+++++|+++|++++|
T Consensus 231 ~l~~~~-~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~D 309 (392)
T PRK07108 231 KIRSAL-PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDD 309 (392)
T ss_pred cCCCCC-CCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHH
Confidence 999998 6789999999999999999999999999999999989999999998877777778899999999999999999
Q ss_pred cceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEE
Q 015576 322 IDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 322 Id~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll 401 (404)
||++|+||+|+++.++.+|.||++++|+|++||++++|||.|+||++.+..++++|+.+++++||+++|++||+|.|+||
T Consensus 310 id~~ei~eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~~~~~g~~~~c~~gg~g~a~~i 389 (392)
T PRK07108 310 IDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRGAKYVVVTMCIGGGQGAAGLF 389 (392)
T ss_pred cCchHhhhHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhhCCCEEEEEEccccChhhEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeC
Q 015576 402 ELM 404 (404)
Q Consensus 402 ~~~ 404 (404)
|+.
T Consensus 390 e~~ 392 (392)
T PRK07108 390 EVL 392 (392)
T ss_pred EeC
Confidence 974
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-64 Score=502.09 Aligned_cols=381 Identities=30% Similarity=0.443 Sum_probs=320.6
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|||||++||||+++.+.+.+.++.+|+.+|++++|+++++++++||.+++|+..+...+.+.+++++...|++...|+
T Consensus 7 ~~V~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~ 86 (427)
T PRK09268 7 RRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPA 86 (427)
T ss_pred CCEEEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCce
Confidence 68999999999999987888999999999999999999999999999999999987654456788888888788657899
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhh-hh-------cCCCCCCcc----ccccccc----
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-AR-------KGSRLGHDT----IVDGMLK---- 156 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~-~~-------~~~~~~~~~----~~~~~~~---- 156 (404)
++|+++|+||+.++..|+..|++|.+|++||+|+|++|+.|..... .+ ....++..+ ..++...
T Consensus 87 ~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (427)
T PRK09268 87 YDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEI 166 (427)
T ss_pred eeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccccC
Confidence 9999999999999999999999999999999999999987753221 11 000011000 0001000
Q ss_pred cccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-C
Q 015576 157 DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-F 235 (404)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~ 235 (404)
....+++....|+..+++|+++||+|||++|+|++++|+|+.++...++|+.+|.|+. + +++|+.+|+ +
T Consensus 167 ~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~-----~-----~~~D~~~r~~~ 236 (427)
T PRK09268 167 PRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL-----G-----LTRDNNLRPDS 236 (427)
T ss_pred ccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc-----C-----cccCCCCCCCC
Confidence 0111222234599999999999999999999999999999999999999999999962 1 678899998 9
Q ss_pred CHHHHhcCCCCcCC--CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC----CccccchHHHHH
Q 015576 236 DAAKLMKLRPSFKE--GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP----EWFTTAPSLAIP 309 (404)
Q Consensus 236 ~~~~~~~~~~~~~~--~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~----~~~~~~~~~a~~ 309 (404)
|+|+|+++||++++ +|++|++|||+++|||+|+||++++.|++++.+|..+|........++ ..+...+..+++
T Consensus 237 t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~ 316 (427)
T PRK09268 237 SLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLMAPAYAVP 316 (427)
T ss_pred CHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhccHHHHHH
Confidence 99999999999987 688999999999999999999999999999988866663333322232 234456778999
Q ss_pred HHHHHcCCCCCCcceEeecccchHHHHHHH---HHhCCCC--------------CCcCCCCCccccCCcccchHHHHHHH
Q 015576 310 KAIANAGLEASQIDYYEINEAFSVVAIANQ---KLLGLDP--------------EQVNAHGGAVSLGHPLGCSGARILVT 372 (404)
Q Consensus 310 ~al~~agl~~~dId~~~~hd~~~~~~~~~~---e~lg~~~--------------~~vn~~Gg~~~~Gh~~gasG~~~l~~ 372 (404)
++|+++|++++|||++|+||+|+++.+..+ |.||||+ .|+|++||.+++|||.||||+++++|
T Consensus 317 ~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e 396 (427)
T PRK09268 317 RLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVAT 396 (427)
T ss_pred HHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHH
Confidence 999999999999999999999999966665 8888873 38999999999999999999999999
Q ss_pred HHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 373 LLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 373 ~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+++||+++++++||+++|++||+|.|+|||+
T Consensus 397 ~~~QL~~~~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 397 LAKLLAEKGSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred HHHHHHhcCCCEEEEEEcccCchheEEEEeC
Confidence 9999999999999999999999999999996
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-64 Score=493.57 Aligned_cols=378 Identities=37% Similarity=0.569 Sum_probs=318.4
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCCCCcc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~~~~~ 91 (404)
++|+|||+++|||+++.+.+.+.+..+|+.+|+++||+|+|+++++||.+++|+..... ..++.++......|++...|
T Consensus 2 ~~v~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p 81 (382)
T PRK07801 2 AEAYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVP 81 (382)
T ss_pred CceEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCc
Confidence 68999999999999987777889999999999999999999999999999999763322 22446666666788865689
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccc--cccHH
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN--DFGMG 169 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 169 (404)
.++++.+|+|++.++..|+++|++|.+|+|||+|+|++++.|... ..+.+.+++...... ....+.+++. +..+.
T Consensus 82 ~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~ 158 (382)
T PRK07801 82 GVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISS-AMTAGEQLGFTSPFA--ESKGWLHRYGDQEVSQF 158 (382)
T ss_pred eeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccc-cccccccccCCcccc--cCcchhhhccCCCCCHH
Confidence 999999999999999999999999999999999999998766311 111111111000000 0011222222 22344
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCC
Q 015576 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE 249 (404)
Q Consensus 170 ~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~ 249 (404)
..|++|+++||++||++++|++++|+|+..||+++.|..+++|+. .++.|+.+|++|+|+++++||+++
T Consensus 159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~----------~~~~d~~~~~~t~e~~~~~~~i~~- 227 (382)
T PRK07801 159 RGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVG----------GVTVDEGPRETSLEKMAGLKPLVE- 227 (382)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccc----------CccccCCcCcCCHHHHhcCCCCCC-
Confidence 469999999999999999999999999999999988888877754 167888888999999999999984
Q ss_pred CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecc
Q 015576 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (404)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd 329 (404)
.||+|++|||+++|||+|+||++++.+++++.+|.++|.+++...+.+......+.++++++|+++|++++|||++|+||
T Consensus 228 ~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~~e~~d 307 (382)
T PRK07801 228 GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDVVEINE 307 (382)
T ss_pred CCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCEeeecc
Confidence 47999999999999999999999999999998888999998877655433455667899999999999999999999999
Q ss_pred cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 330 ~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+|++.++.++|.||||++|+|++||++++|||.|+||+++++++++||+++++++|+++.|++||.+.++|||++
T Consensus 308 ~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~~~~vl~~~ 382 (382)
T PRK07801 308 AFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTANVTIIERL 382 (382)
T ss_pred cchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEcccccceeEEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999974
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-65 Score=446.57 Aligned_cols=390 Identities=39% Similarity=0.594 Sum_probs=377.3
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCCCCcc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~~~~~ 91 (404)
+.||||++-||+|+.+.+.+++.+..+|..-|++.||+.+++.++.+|.+|+|++..+. .+.+.++++....|+|.+.|
T Consensus 4 kgvfiVaAKRTaFGtfGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~p 83 (396)
T KOG1391|consen 4 KGVFIVAAKRTAFGTFGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETP 83 (396)
T ss_pred ceEEEEEecccccccccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccC
Confidence 56999999999999999999999999999999999999999999999999999988654 56778999999999999999
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHH
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (404)
.++++.-|.|+.+++..+++.|.-|++++||++|+|.||.+|+...+.|+|+.+|.++.++...|+.+.++|-..+|+++
T Consensus 84 ALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~T 163 (396)
T KOG1391|consen 84 ALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMT 163 (396)
T ss_pred ceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCC
Q 015576 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (404)
Q Consensus 172 a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~ 250 (404)
|+++..+|.++||+.|+|++.+.+++.++..+++|..||+|+++|.++++- .|.-||..|| .|+|.|..+||+|..+
T Consensus 164 AEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~--~f~vDEHpRp~TT~E~L~KLppvFkKd 241 (396)
T KOG1391|consen 164 AENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQ--TFQVDEHPRPQTTLEQLQKLPPVFKKD 241 (396)
T ss_pred HHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCce--eeEecCCCCccchHHHHhhCCchhccC
Confidence 999999999999999999999999999999999999999999999998863 4888999998 9999999999999999
Q ss_pred CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeeccc
Q 015576 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (404)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~ 330 (404)
|.++..+.+-++|||+|+|+.+++..+++..+|+++|.++.....+|..++.++.++++.+|+++|+..+|||++|+++.
T Consensus 242 G~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~EvNEA 321 (396)
T KOG1391|consen 242 GTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLVEVNEA 321 (396)
T ss_pred CeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceEEechh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 331 FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 331 ~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
|+.+.+...+.|+++.+++|++||.+..|||.|+||.+....+++.|++++++||+...|.|||+|.|+|+|.+
T Consensus 322 FApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~~KYgiGSACIGGGQGIA~l~e~~ 395 (396)
T KOG1391|consen 322 FAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRGGKYGIGSACIGGGQGIAVLIEST 395 (396)
T ss_pred hchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHcCCccccccccccCCceEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-63 Score=490.65 Aligned_cols=384 Identities=34% Similarity=0.531 Sum_probs=328.6
Q ss_pred CceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHHc-CCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCCCC
Q 015576 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNS 89 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~a-gi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~~~ 89 (404)
.+|+|||+++|||+++ .+.+++.++.+|+.+|+++||+|+ |+++++||.+++|+..+.. .+++.+..++..+|++ .
T Consensus 2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~ 80 (406)
T PRK07851 2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F 80 (406)
T ss_pred CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence 5899999999999985 567788999999999999999997 9999999999999876432 3566788999999996 5
Q ss_pred cceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccc-------------cccccc
Q 015576 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTI-------------VDGMLK 156 (404)
Q Consensus 90 ~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~-------------~~~~~~ 156 (404)
.|+++++.+|+|+..++..|+++|++|.+|+|||+|+|+++..|..... +.+. ++.... .++.+.
T Consensus 81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
T PRK07851 81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSD-SLPD-TKNPLFAEAQARTAARAEGGAEAWH 158 (406)
T ss_pred CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccc-cccc-cCchhhhhccccccccccccccccc
Confidence 8999999999999999999999999999999999999999875521110 0000 000000 001111
Q ss_pred ccccc---ccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccc
Q 015576 157 DGLWD---VYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE 233 (404)
Q Consensus 157 ~~~~~---~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~ 233 (404)
.++.+ +.....|++.+++|+++||++++++++|++++++++..+.++..+..+++|+.+++. ..+++|+.+|
T Consensus 159 ~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~-----~~~~~d~~~r 233 (406)
T PRK07851 159 DPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG-----TVVSTDDGPR 233 (406)
T ss_pred ccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCC-----ceeCCCCCcc
Confidence 11111 111246788999999999999999999999999999988888888888889876652 2477888888
Q ss_pred c-CCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHH
Q 015576 234 K-FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312 (404)
Q Consensus 234 ~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al 312 (404)
+ +|+|+++++||+++++|.+|++|||+++|||+|+||++++.+++++.+|+++|.|++.....+.....++..+++++|
T Consensus 234 ~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al 313 (406)
T PRK07851 234 AGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQAL 313 (406)
T ss_pred CCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHHHHH
Confidence 8 999999999999997777999999999999999999999999999999989999999987666555556789999999
Q ss_pred HHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeecc
Q 015576 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNG 392 (404)
Q Consensus 313 ~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~ 392 (404)
+++|++++|||++|+||+|++.++..+|.||||+.|+|++||++++|||+|+||+++++++++||+.+++++||+++|++
T Consensus 314 ~~Agi~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~ 393 (406)
T PRK07851 314 ARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVG 393 (406)
T ss_pred HHhCCCHHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeEEEeC
Q 015576 393 GGGASALVLELM 404 (404)
Q Consensus 393 gG~~~a~ll~~~ 404 (404)
||+|.|+|||++
T Consensus 394 gg~g~a~~~e~~ 405 (406)
T PRK07851 394 GGQGMAMVLERL 405 (406)
T ss_pred cChhhEEEEEec
Confidence 999999999985
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-62 Score=470.99 Aligned_cols=357 Identities=33% Similarity=0.512 Sum_probs=319.4
Q ss_pred ceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCccee
Q 015576 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT 93 (404)
Q Consensus 14 ~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~ 93 (404)
+|+|||++||||+++.+.+.+.++.+|+..|++++++ |++ ++||.+++|++.+. +.+.++.++..+|++...|++
T Consensus 2 ~v~Ivg~~rTpfg~~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~--~~~~~r~~~~~~Gl~~~~p~~ 76 (361)
T PRK06690 2 RAVIVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGV 76 (361)
T ss_pred cEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC--cchHHHHHHHHcCCCCCCCce
Confidence 5999999999999988899999999999999999855 886 89999999998654 366777889999998679999
Q ss_pred eEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHH
Q 015576 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (404)
Q Consensus 94 ~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (404)
+|+++|+||+.++..|+..|++|.+|++||+|+|++|+.|+.. . ..+.. + . +....|++.|+
T Consensus 77 tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~-~----~~~~~---------~-~---~~~~~~~~~a~ 138 (361)
T PRK06690 77 TIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQN-R----ARFSP---------E-T---IGDPDMGVAAE 138 (361)
T ss_pred ehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCccc-c----cccCc---------c-c---ccCccHHHHHH
Confidence 9999999999999999999999999999999999999877421 1 00100 0 0 11123999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhc-CCCCcCCCC
Q 015576 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMK-LRPSFKEGG 251 (404)
Q Consensus 174 ~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~-~~~~~~~~g 251 (404)
+|+++||++||++|.|+..+++|+.++.++++|+.+|+|++- ++ |+.+|+ +|+|+++. ++|+++++|
T Consensus 139 ~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~----------~~-d~~~r~~~~~e~ll~~l~p~~~~~g 207 (361)
T PRK06690 139 YVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFNG----------LL-DESIKKEMNYERIIKRTKPAFLHNG 207 (361)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceecccC----------cc-ccccCCCCCHHHHhhcCCCcccCCC
Confidence 999999999999999999999999999999999999988641 45 788888 99999955 499998889
Q ss_pred ccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
++|++|||+++|||+|+||++++.+++++.+|.++|.+++....++..+...+..+++++|+++|++++|||++|+||+|
T Consensus 208 ~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eaf 287 (361)
T PRK06690 208 TVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAF 287 (361)
T ss_pred ceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchh
Confidence 99999999999999999999999999999899889999998776666666678899999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+++.+..+|.||++++|+|++||++++|||.|+||++++.++++||+.+++++|++++|++||+|.++|||+.
T Consensus 288 a~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~~~~g~~~~c~~gG~g~a~~~e~~ 360 (361)
T PRK06690 288 ASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDMKYGIATLGIGGGIGLALLFEKV 360 (361)
T ss_pred HHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhCCCEEEEEEcccCcceeEEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999973
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-56 Score=445.04 Aligned_cols=341 Identities=19% Similarity=0.154 Sum_probs=279.6
Q ss_pred CCCCCCCcCCC---CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHH
Q 015576 1 MVPLEPSESIK---ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPA 77 (404)
Q Consensus 1 ~~~~~~~~~~~---~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a 77 (404)
|...||++++| |++|+|||+++|||+++. .+.+..+|+.+|+++||+|+|+++++||.+++++....+.+++.+
T Consensus 1 ~~~~~~~~~~~~~~m~~VaIvG~g~Tpfgr~~---~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~ 77 (430)
T PRK06365 1 MITFSDRQLKMKKKSRDVYMVAAGVTKFDKAS---PYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLA 77 (430)
T ss_pred CcccCcccchhhhhccCEEEEEeeecCccccC---CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchh
Confidence 66789999874 679999999999999852 246789999999999999999999999998888765545555555
Q ss_pred HH-HHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccc
Q 015576 78 RQ-AALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLK 156 (404)
Q Consensus 78 ~~-i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~ 156 (404)
+. ++..+|++. .|+.+++.+|+|+..++..|+..|++|.+|+|||+|+|+++..+......... ...+..+.
T Consensus 78 ~~~~~~~lGl~~-~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~------~~~d~~~~ 150 (430)
T PRK06365 78 GIMVQDYLGLVP-KPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIA------LASDTNFD 150 (430)
T ss_pred hHHHHHhcCCCC-CceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhc------cccccccc
Confidence 54 578999984 89999999999999999999999999999999999999998865322110000 00111111
Q ss_pred cccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCC
Q 015576 157 DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD 236 (404)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~ 236 (404)
..+.. ..+..|++.+++|+++||+++|++++|++++|+|+.+||.+.. + .++|
T Consensus 151 ~~~g~-~~~~~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~-~-------------------------~~~t 203 (430)
T PRK06365 151 YPLGG-FYTGYYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQS-P-------------------------MKIT 203 (430)
T ss_pred ccccC-ccHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhc-C-------------------------CCCC
Confidence 11111 1135689999999999999999999999999999999987421 1 1278
Q ss_pred HHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC--CCccc-------------
Q 015576 237 AAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--PEWFT------------- 301 (404)
Q Consensus 237 ~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~--~~~~~------------- 301 (404)
+|+++++|+|++ |+|++|||+++|||+|+||++++.|++++.+| ++|.+.+..... +....
T Consensus 204 ~e~v~~s~~i~~---Plt~~d~~~~sDGAaAvvl~See~A~~l~~~p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (430)
T PRK06365 204 VEDVRKSPMVSY---PLTRLDVCAMSDGAACAILASEDKAFEITDKP-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPD 279 (430)
T ss_pred HHHHhcCCcccc---CcchhhcCCcCCceEEEEEecHHHHHhcCCCC-eEEEEEEEeccccccccccccccccccccccc
Confidence 999999999987 99999999999999999999999999998887 577777766432 11100
Q ss_pred -------------cchHHHHHHHHHHcCCC--CCCcceEeecccchHHHHHHHHHhCCCCC------------------C
Q 015576 302 -------------TAPSLAIPKAIANAGLE--ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------Q 348 (404)
Q Consensus 302 -------------~~~~~a~~~al~~agl~--~~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~ 348 (404)
...+.+++++|+++|++ ++|||++|+||+|+++++.++|.||||++ |
T Consensus 280 ~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~p 359 (430)
T PRK06365 280 DYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLP 359 (430)
T ss_pred cccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCcc
Confidence 01247999999999998 89999999999999999999999999983 9
Q ss_pred cCCCCCccccCCcccchHHHHHHHHHHHHHhcCC
Q 015576 349 VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (404)
Q Consensus 349 vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~ 382 (404)
+|++||.+++|||.|+||+++++|+++|||++++
T Consensus 360 iNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~ 393 (430)
T PRK06365 360 VNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIK 393 (430)
T ss_pred ccCCCchhcCCCcccHHHHHHHHHHHHHHhcccC
Confidence 9999999999999999999999999999998874
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-57 Score=443.45 Aligned_cols=332 Identities=23% Similarity=0.312 Sum_probs=276.2
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
|+|+|||+++|||+++. +++..+|+.+|+++||+|+|+++++||.+++|+..+.....+++..++..+|++ ..+.
T Consensus 1 ~~v~IvG~g~t~~~~~~----~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~ 75 (385)
T PRK12578 1 RRVAVIGVGNSKFGRRD----DVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVP 75 (385)
T ss_pred CceEEEeecccceeecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCe
Confidence 57999999999999875 488999999999999999999999999999998776444456788899999997 4677
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (404)
++++.+|+|++.+|..|+.+|++|.+|+|||+|+|.++..+....... .... .+.........+..+..+++.+
T Consensus 76 ~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~-~~~~-----~~~~~~~~~~g~~~~~~~a~~a 149 (385)
T PRK12578 76 LRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAI-GGRG-----GNYQWEYHFYGTTFPTYYALYA 149 (385)
T ss_pred eEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhh-cccc-----cccccccccCCCChHHHHHHHH
Confidence 999999999999999999999999999999999999987543211100 0000 0000000000011135678899
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCc
Q 015576 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGS 252 (404)
Q Consensus 173 ~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~ 252 (404)
++||++||+++|++++|++++|+++..||. ++|+.+ ++.|+++++|++++ |
T Consensus 150 ~~~m~~~g~t~e~~a~va~~~~~~A~~np~-a~~~~~-------------------------i~~e~v~~s~~i~~---P 200 (385)
T PRK12578 150 TRHMAVYGTTEEQMALVSVKAHKYGAMNPK-AHFQKP-------------------------VTVEEVLKSRAISW---P 200 (385)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHhcCCh-hhcCCC-------------------------CCHHHHhcCCccCC---C
Confidence 999999999999999999999999999986 344332 77899999999987 8
Q ss_pred cccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC------CCcccc-chHHHHHHHHHHcCCCCCCcceE
Q 015576 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA------PEWFTT-APSLAIPKAIANAGLEASQIDYY 325 (404)
Q Consensus 253 ~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~------~~~~~~-~~~~a~~~al~~agl~~~dId~~ 325 (404)
+|++|||+++|||+|+||++++.+++++.++.++|.|++...+. ++.... ....+++++|+++|++++|||++
T Consensus 201 l~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ 280 (385)
T PRK12578 201 IKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVA 280 (385)
T ss_pred ccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 99999999999999999999999999986666899999987542 222222 45689999999999999999999
Q ss_pred eecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCce
Q 015576 326 EINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKY 384 (404)
Q Consensus 326 ~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~ 384 (404)
|+||+|+++++..+|.||||++ |+|++||.+++|||.|+||+++++|+++|||++++.+
T Consensus 281 ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag~~ 357 (385)
T PRK12578 281 TVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAGKL 357 (385)
T ss_pred EecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcccC
Confidence 9999999999999999999984 8999999999999999999999999999999886543
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-57 Score=444.90 Aligned_cols=350 Identities=19% Similarity=0.219 Sum_probs=287.3
Q ss_pred CCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCC
Q 015576 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~ 89 (404)
|+++|+|||+++|||+|+ + .+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++ .
T Consensus 2 ~~~~v~Ivg~~~t~~~r~-~----~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~ 75 (399)
T PRK06059 2 MPEPVYILGAGMHPWGKW-G----RDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-G 75 (399)
T ss_pred CCCcEEEEEecccccCCC-C----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-C
Confidence 668999999999999975 2 57899999999999999999999999999988765432 344568899999996 5
Q ss_pred cceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHH
Q 015576 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (404)
Q Consensus 90 ~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (404)
.+.++++.+|+|++.+|..|+.+|++|.+|+|||+|+|+++.... .. ..+....+ ..+..+...++.. +..|+
T Consensus 76 ~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~-~~--~~~~~~~~-~~~~~~~~~g~~~---~~~~a 148 (399)
T PRK06059 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFF-AP--VGGERPDD-PDWLRFHLIGATN---PVYFA 148 (399)
T ss_pred CceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCC-cc--cccccccc-cchhhcccCCCcc---HHHHH
Confidence 789999999999999999999999999999999999999885210 00 00000000 0000000011111 35799
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcC
Q 015576 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFK 248 (404)
Q Consensus 170 ~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~ 248 (404)
+.+++|+++||+++|+++.+++++++++..||.+ .+|+ +|+|+|+++|||++
T Consensus 149 l~a~~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A---------------------------~~r~~~t~e~v~~s~~i~~ 201 (399)
T PRK06059 149 LLARRRMDLYGATVEDFAQVKVKNARHGLLNPNA---------------------------RYRKEVTVEDVLASPVVSD 201 (399)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcHh---------------------------hcCCCCCHHHHhcCCcccC
Confidence 9999999999999999999999999999877763 2233 89999999999998
Q ss_pred CCCccccCCCCccccccceeeecCHHHHHHc--CCCceEEEEeeEEeccCC-----Cc--cc-------cc-----hHHH
Q 015576 249 EGGSVTAGNASIISDGAAALVLVSGVKALEL--GLQVIAKIRGFADAAQAP-----EW--FT-------TA-----PSLA 307 (404)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~--~~~~~~~i~g~~~~~~~~-----~~--~~-------~~-----~~~a 307 (404)
|++++|||+++|||+|+||++++.++++ +.++.++|.+++...... .. +. .. .+.+
T Consensus 202 ---Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a 278 (399)
T PRK06059 202 ---PLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQI 278 (399)
T ss_pred ---CCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHH
Confidence 8999999999999999999999999998 555558999999865211 11 11 11 1467
Q ss_pred HHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHH
Q 015576 308 IPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARI 369 (404)
Q Consensus 308 ~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~ 369 (404)
++++|+++|++++|||++|+||+|+.+.+..+|.||||++ |||++||++++|||.|+||+++
T Consensus 279 ~~~a~~~agl~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~ 358 (399)
T PRK06059 279 LDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQ 358 (399)
T ss_pred HHHHHHHcCCCHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHH
Confidence 9999999999999999999999999999999999999975 9999999999999999999999
Q ss_pred HHHHHHHHHhcC-------CceeEEeeeccccceeeeEEEe
Q 015576 370 LVTLLGVLRHKK-------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 370 l~~~~~~l~~~~-------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
++|+++||++++ .++++++.++++|.+.++|||+
T Consensus 359 ~~e~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 359 VCELTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred HHHHHHHhccCcCCccCCCccEEEEeccCCcccceEEEecC
Confidence 999999999873 4678888888888999999986
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-56 Score=436.25 Aligned_cols=330 Identities=20% Similarity=0.182 Sum_probs=271.7
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCC-CcHHHHHHHHCCCCCCc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSV 90 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~-~~~a~~i~~~lGl~~~~ 90 (404)
.++|+|||+++|||+++.+ ++..+|+.+|+++||+|+|+++++||.+++++....+.+ ...+..++..+|+. ..
T Consensus 8 ~~~vaIvG~g~t~~~~~~~----~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~ 82 (392)
T PRK06065 8 NKRVAVIGAGLTLFRRRLL----ETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RK 82 (392)
T ss_pred cCceEEEEecccCCcCCCC----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CC
Confidence 4689999999999998754 788999999999999999999999999999864222222 33677898999986 48
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|.++|+.+|+|+..++..|+++|++|.+|+|||+++|+++.... ...... . ...++.+...+. +..+..|++
T Consensus 83 ~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~-~~~~~~----~--~~~~~~~~~p~g-~~~~~~~Al 154 (392)
T PRK06065 83 PVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARP-HPQAVF----R--YIWDPILEKPLN-PNLIWIFAM 154 (392)
T ss_pred CeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeeccccccc-chhHHH----h--hhccchhccCCC-ccHHHHHHH
Confidence 99999999999999999999999999999999999999764211 000000 0 001111111111 112346999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCC
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG 250 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 250 (404)
.|+|||++||+++|+++++++++|+|+..||++.+ + +++|+||+++||+|++
T Consensus 155 ~a~rym~~yG~~~e~lA~vav~~~~~A~~NP~A~~-r-------------------------~~lt~e~vl~s~~ia~-- 206 (392)
T PRK06065 155 EMHRYMATYGIKKEEIALVSVKNKRNALNNPYAQL-G-------------------------SKITVEDVLKSEVLVW-- 206 (392)
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHhhccCchhhh-c-------------------------CCCCHHHHhcCCcccC--
Confidence 99999999999999999999999999999998521 1 1289999999999998
Q ss_pred CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC------CccccchHHHHHHHHHHcCCCC--CCc
Q 015576 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEA--SQI 322 (404)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~agl~~--~dI 322 (404)
|+|++|||+++|||+|+||++++.|++++.+| ++|.+++...+.. ......+..+++++|+++|+++ +||
T Consensus 207 -Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~di 284 (392)
T PRK06065 207 -PVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEI 284 (392)
T ss_pred -CCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhC
Confidence 99999999999999999999999999998777 6899999875421 1122234689999999999985 999
Q ss_pred ceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCce
Q 015576 323 DYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKY 384 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~ 384 (404)
|++|+||+|++.++.++|.||||++ |+|++||++++|||.|+||+.+++|+++||+++++.+
T Consensus 285 D~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ag~r 364 (392)
T PRK06065 285 DVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTAGKM 364 (392)
T ss_pred cEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccccCC
Confidence 9999999999999999999999985 9999999999999999999999999999999986543
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-56 Score=442.82 Aligned_cols=355 Identities=19% Similarity=0.250 Sum_probs=278.4
Q ss_pred CCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CC-c-HHHHHHHHCCCC
Q 015576 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQ-A-PARQAALGAGIP 87 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~-~-~a~~i~~~lGl~ 87 (404)
|+++|+|||+++|||+|+ ...+++++.+|+.+|+++||+|+|+++++||.+++++..++.. +. . .........++.
T Consensus 1 ~~~~v~Ivg~~~t~~~r~-~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (403)
T PRK06289 1 MSDDVWVLGGYQSDFARN-WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW 79 (403)
T ss_pred CCCcEEEEeCCcCccccc-cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC
Confidence 456899999999999985 3445789999999999999999999999999999998765421 11 1 111111233443
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccc-ccc
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY-NDF 166 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 166 (404)
+.|+++++.+|+|++.+|..|+.+|++|.+|+|||+|+|+++..|........+.. .+ .+ ...+..++ .+.
T Consensus 80 -g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~---~~-~~---~~~~~~~~~~~~ 151 (403)
T PRK06289 80 -GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAA---AW-TG---HEGQDARFPWPS 151 (403)
T ss_pred -CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcc---cc-cc---cccccCCCccHH
Confidence 46899999999999999999999999999999999999999876543211111100 00 00 11222222 245
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
.|++.|++||++||+++|+++.|++++|+++.+||++. ++..+ . ..+++.+|++.+|++
T Consensus 152 ~~al~a~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~-~~~~~----------------~----~~~~~~~d~~~s~~i 210 (403)
T PRK06289 152 MFARVADEYDRRYGLDEEHLRAIAEINFANARRNPNAQ-TRGWA----------------F----PDEATNDDDATNPVV 210 (403)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhh-cCccc----------------c----ccccchhhhhcCCcc
Confidence 68999999999999999999999999999999999863 23211 0 013778899999999
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCC-CceEEEEeeEEeccCC-------------CccccchHHHHHHHH
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAAQAP-------------EWFTTAPSLAIPKAI 312 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~-~~~~~i~g~~~~~~~~-------------~~~~~~~~~a~~~al 312 (404)
.+ |+|++|||+++|||+|+||++++.+++++. ++.++|.|++..+... ..+ ..+..+++++|
T Consensus 211 ~~---Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~ 286 (403)
T PRK06289 211 EG---RLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVLDAY 286 (403)
T ss_pred cC---CCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHHHHH
Confidence 66 999999999999999999999999999876 5668999999874421 111 12467999999
Q ss_pred HHcCCCCCCcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHH
Q 015576 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLL 374 (404)
Q Consensus 313 ~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~ 374 (404)
+++|++++|||++|+||+|+++++.++|.||||++ |+|++||.+++|||.|+||+.+++|++
T Consensus 287 ~~Agi~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~ 366 (403)
T PRK06289 287 RRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAA 366 (403)
T ss_pred HHcCCCHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHH
Confidence 99999999999999999999999999999999985 899999999999999999999999999
Q ss_pred HHHHhcCCce------eEEeeeccccceeee
Q 015576 375 GVLRHKKGKY------GVGGICNGGGGASAL 399 (404)
Q Consensus 375 ~~l~~~~~~~------gl~~~~~~gG~~~a~ 399 (404)
+|||++++.+ ...+.+.||+.+.++
T Consensus 367 ~QLrg~ag~~Qv~~~~~~l~~~~gg~~~~~~ 397 (403)
T PRK06289 367 KQVTGTAGDYQVEGAKTFGTLNIGGSTTTTV 397 (403)
T ss_pred HHHhccccCccCCchheEEEEecCcccceEE
Confidence 9999986543 334446565555443
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-56 Score=437.23 Aligned_cols=330 Identities=22% Similarity=0.296 Sum_probs=271.8
Q ss_pred CCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc
Q 015576 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~ 90 (404)
|+++|+|||+++|||+++. +.+..+|+.+|+++||+|+|+++++||.+++|+....+........++..+|++ ..
T Consensus 5 ~~~~v~IvG~g~tp~~~~~----~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~ 79 (398)
T PRK06157 5 IKDKVAILGMGCTKFGERW----DAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NI 79 (398)
T ss_pred CCCCeEEEEeccccccccC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CC
Confidence 4478999999999999864 478999999999999999999999999999998754321122235677889997 48
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|..+++.+|+|++.+++.|+..|++|.+|++||+|+|+++..|...... . ..+. .....+.....+..|++
T Consensus 80 ~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~--~-~~~~------~~~~~~~~~~~~~~~al 150 (398)
T PRK06157 80 PVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPV--A-NPGT------LADMTMPNVTAPGNFAQ 150 (398)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccc--c-cccc------chhcccccCchHHHHHH
Confidence 9999999999999999999999999999999999999998755321100 0 0000 00000000011246899
Q ss_pred HHHHHHHHcCCCHHHH----HHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCC
Q 015576 171 CAEICANKHTITRDEQ----DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRP 245 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~----a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~ 245 (404)
.+++||++||+++|++ +++++++|+|+.+||.+. +|+ +|.|+|+++||
T Consensus 151 ~a~~~~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~---------------------------~r~~~t~e~v~~s~~ 203 (398)
T PRK06157 151 LASAYAAKYGVSREDLKRAMAHVSVKSHANGARNPKAH---------------------------LRKAVTEEQVLKAPM 203 (398)
T ss_pred HHHHHHHHhCCCHHHHcccccHHHHHHHHHHhcCChhh---------------------------cCCCCCHHHHhcCCc
Confidence 9999999999999999 899999999999988741 222 89999999999
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC----------CCccccchHHHHHHHHHHc
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA----------PEWFTTAPSLAIPKAIANA 315 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~----------~~~~~~~~~~a~~~al~~a 315 (404)
+++ |++++|||+++|||+|+||++++.|++++.++.++|.|++...+. +..+. .+..+++++|+++
T Consensus 204 v~~---Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~A 279 (398)
T PRK06157 204 IAG---PLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYREA 279 (398)
T ss_pred ccC---CCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHHc
Confidence 998 899999999999999999999999999987455899999887532 11111 2467999999999
Q ss_pred CCC--CCCcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHH
Q 015576 316 GLE--ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLG 375 (404)
Q Consensus 316 gl~--~~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ 375 (404)
|++ ++|||++|+||+|+++++..+|.||||++ |+|++||.+++|||.|+||+++++|+++
T Consensus 280 Gl~~~~~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~ 359 (398)
T PRK06157 280 GITDPREELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYL 359 (398)
T ss_pred CCCCchhcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHH
Confidence 998 79999999999999999999999999984 8999999999999999999999999999
Q ss_pred HHHhcCCcee
Q 015576 376 VLRHKKGKYG 385 (404)
Q Consensus 376 ~l~~~~~~~g 385 (404)
||+++++.++
T Consensus 360 QLrg~ag~rQ 369 (398)
T PRK06157 360 QLLGRAGERQ 369 (398)
T ss_pred HhcccccCcc
Confidence 9999876443
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-56 Score=438.01 Aligned_cols=333 Identities=24% Similarity=0.272 Sum_probs=272.1
Q ss_pred ceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCccee
Q 015576 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT 93 (404)
Q Consensus 14 ~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~ 93 (404)
+|+|||+++|||+++. ++.+..+|+.+|+++||+|+|+++++||.+++|+..++... ...+...+|++ ..|.+
T Consensus 2 ~v~IvG~~~t~~~~~~---~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~ 74 (391)
T PRK08256 2 KVFVAGVGMTPFEKPG---ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIV 74 (391)
T ss_pred cEEEEeccccccccCC---CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCc
Confidence 6999999999999642 35788999999999999999999999999999987664321 23456778995 56889
Q ss_pred eEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhh-hhhhcCCCCCCc-ccccccc-ccccccccccccHHH
Q 015576 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL-AEARKGSRLGHD-TIVDGML-KDGLWDVYNDFGMGV 170 (404)
Q Consensus 94 ~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~-~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 170 (404)
+++.+|+|++.+|..|+++|++|++|+|||+|+|+++..+... ...+ ...++.. ...+.+. .+++ +..+..|++
T Consensus 75 ~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~ 151 (391)
T PRK08256 75 NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDR-PSPLERFDKALAELQGFDPA--PPALRMFGG 151 (391)
T ss_pred ccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccc-cchhhhhhhhhhhhcccccC--CccHHHHHH
Confidence 9999999999999999999999999999999999997644211 0000 0001000 0000000 0111 111247999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCC
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG 250 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 250 (404)
.|++|+++||+++|++++|++++|+|+..||.+ +|+. ++|+|+|+++||+++
T Consensus 152 ~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A-~~~~-------------------------~~t~e~~~~s~~i~~-- 203 (391)
T PRK08256 152 AGREHMEKYGTTAETFAKIGVKARRHAANNPYA-QFRD-------------------------EYTLEDVLASPMIWG-- 203 (391)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChh-hcCC-------------------------CCCHHHHhcCCcccC--
Confidence 999999999999999999999999999999964 2221 289999999999998
Q ss_pred CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcccc----------chHHHHHHHHHHcCCCCC
Q 015576 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT----------APSLAIPKAIANAGLEAS 320 (404)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~----------~~~~a~~~al~~agl~~~ 320 (404)
|+|++|||+++|||+|+||++++.+++++.++.++|.|.+...+.+..+.. .+..+++++|+++|++++
T Consensus 204 -Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~ 282 (391)
T PRK08256 204 -PLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPE 282 (391)
T ss_pred -CCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHH
Confidence 899999999999999999999999999886677999999988765433221 246799999999999999
Q ss_pred CcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCC
Q 015576 321 QIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (404)
Q Consensus 321 dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~ 382 (404)
|||++|+||+|++..+.++|.||||++ |+|++||.+++|||.|+||+.+++|+++||+++++
T Consensus 283 DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag 362 (391)
T PRK08256 283 DIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTAG 362 (391)
T ss_pred HCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCcC
Confidence 999999999999999999999999998 99999999999999999999999999999999977
Q ss_pred cee
Q 015576 383 KYG 385 (404)
Q Consensus 383 ~~g 385 (404)
+++
T Consensus 363 ~~Q 365 (391)
T PRK08256 363 ARQ 365 (391)
T ss_pred CCc
Confidence 654
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-55 Score=434.18 Aligned_cols=338 Identities=22% Similarity=0.210 Sum_probs=275.1
Q ss_pred CCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc
Q 015576 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~ 90 (404)
+.++|+|||+++|||+++. +++..+|+.+|+++||+|+|+++++||.+++++... ......++..+|++ ..
T Consensus 6 ~~~~vaIvG~g~t~~~~~~----~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~----~~~~~~la~~lGl~-~~ 76 (384)
T PRK06158 6 LRGRTAIVGAATAGLGEAP----GLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD----ALWGLSVAEYLGIR-PR 76 (384)
T ss_pred CCCCEEEEEeeeccceeCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC----CCcHHHHHHHcCCC-Ce
Confidence 4578999999999998764 488999999999999999999999999999987532 22335788899997 47
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEe-ccccccCCchhhhhhhcCCCCCCcccccccccccccccc----cc
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAG-GMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY----ND 165 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~-g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 165 (404)
+..+++.+|+|+..+|..|+.+|++|.+|+|||+ +.|.++.. .... . ......+..|+ .+
T Consensus 77 ~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~-~~~~---------~-----~~~~~~~~~~~g~~~~~ 141 (384)
T PRK06158 77 FVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAG-GKLR---------S-----MLDPQPYEAPYKPVNPV 141 (384)
T ss_pred eeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCc-cccc---------c-----cccccchhcccCCCCcH
Confidence 8889999999999999999999999999999987 66655431 0000 0 00001111222 13
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
..|++.+++||++||+++|+++++++++|+++..||.+. +++ ++|+|+++++||
T Consensus 142 ~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~-~~~-------------------------~~t~e~vl~s~~ 195 (384)
T PRK06158 142 SAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAF-MRD-------------------------PLTIDDVLAARM 195 (384)
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhh-hCC-------------------------CCCHHHHhcCCc
Confidence 579999999999999999999999999999999999842 111 289999999999
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC------CccccchHHHHHHHHHHcCCCC
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEA 319 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~agl~~ 319 (404)
|++ |+|++|||+++|||+|+||++++.+++++.++ ++|.+++...+.. +........+++++|+++|+++
T Consensus 196 ia~---Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p 271 (384)
T PRK06158 196 VSD---PLSVRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTP 271 (384)
T ss_pred cCC---CCchhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCH
Confidence 998 99999999999999999999999999988777 7999998775421 2222344679999999999999
Q ss_pred CCcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHHHhcC
Q 015576 320 SQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (404)
Q Consensus 320 ~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~ 381 (404)
+|||++|+||+|++.++.++|.||||++ |+|++||+++.||| |++|+.+++|+++|||+++
T Consensus 272 ~DId~~ElyD~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~a 350 (384)
T PRK06158 272 ADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEA 350 (384)
T ss_pred HHCcEEEecCCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999987 99999999999999 9999999999999999986
Q ss_pred Cc-------eeEEeeecccc-ceeeeEEEe
Q 015576 382 GK-------YGVGGICNGGG-GASALVLEL 403 (404)
Q Consensus 382 ~~-------~gl~~~~~~gG-~~~a~ll~~ 403 (404)
++ +++++..++.+ ..+.+|+++
T Consensus 351 g~rQv~~a~~gl~~~~Gg~~~~~~~~vl~~ 380 (384)
T PRK06158 351 GERQVAGAEVALAHGNGGVLSSQATAILGT 380 (384)
T ss_pred CCCcCCCCCEEEEECCCCcccceEEEEEec
Confidence 54 45555443322 234456653
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-55 Score=431.94 Aligned_cols=342 Identities=21% Similarity=0.166 Sum_probs=281.1
Q ss_pred CCCceEEEeeccCcc-ccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCC-CC-CcHHHHHHHHCCCC
Q 015576 11 KARDVCIVGVARTPM-GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LG-QAPARQAALGAGIP 87 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~-~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~-~~-~~~a~~i~~~lGl~ 87 (404)
||++|+|||+++|+| .++. +++..+|+.+|+++||+|+|+++++||.+++++. ++. .+ ..++..++..||++
T Consensus 1 ~~~~v~IvG~g~t~~~~~~~----~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~-~~~~~~~~~~~~~va~~LGl~ 75 (386)
T PRK08313 1 MKRLAAVLGTGQTKYVAKRQ----DVSMAGLVREAIDRALADAGLTWDDIDAVVVGKA-PDFFEGVMMPELFLADALGAT 75 (386)
T ss_pred CCCcEEEEEeecCCcCccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-ccccccccCchHHHHHhcCCC
Confidence 678999999999999 6653 4789999999999999999999999999999873 332 22 24557899999996
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccc---c
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY---N 164 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 164 (404)
..++++++.+|+++..++..|+.+|++|.+|+|||+++|+++.... .. .. ..++ .+..|+ .
T Consensus 76 -~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~-~~----~~------~~~~----~~~~~~g~~~ 139 (386)
T PRK08313 76 -GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNA-MW----AL------SIPV----PFTKPVGAGA 139 (386)
T ss_pred -CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCcc-cc----cc------cccc----ccccccccch
Confidence 5789999999999999999999999999999999999999876311 10 00 0011 122222 2
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCC
Q 015576 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (404)
Q Consensus 165 ~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~ 244 (404)
+..+++.+++||++||+++|+++++++++|.++.+||.+. |+. +++|.|+++++|
T Consensus 140 ~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A~-~r~------------------------~~~t~e~v~~s~ 194 (386)
T PRK08313 140 GGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAH-LHQ------------------------PDITLEKVMASQ 194 (386)
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHHh-cCC------------------------CCCCHHHHhcCC
Confidence 4679999999999999999999999999999999999852 111 028899999999
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC------ccccchHHHHHHHHHHcCCC
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE------WFTTAPSLAIPKAIANAGLE 318 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~------~~~~~~~~a~~~al~~agl~ 318 (404)
+|++ |+|++|||+++|||+|+||++++.+++++.++.++|.|++...+... ......+.+++++|+++|++
T Consensus 195 ~ia~---Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~ 271 (386)
T PRK08313 195 MLWD---PIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGIT 271 (386)
T ss_pred cccC---CCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCC
Confidence 9998 89999999999999999999999999988788789999998754321 11234578999999999998
Q ss_pred --CCCcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 319 --ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 319 --~~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
++|||++|+||+|++.++..+|.||||++ |+|++||+++ |||.|+||+.+++|+++||+
T Consensus 272 ~p~~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~-g~p~gatG~~~~~e~~~qlr 350 (386)
T PRK08313 272 DPRDEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS-SNPIGASGMIRFAEAALQVM 350 (386)
T ss_pred CChhhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc-cCCCcHHHHHHHHHHHHHhc
Confidence 69999999999999999999999999987 9999999999 99999999999999999999
Q ss_pred hcCCc-------eeEEeeecccc-ceeeeEEE
Q 015576 379 HKKGK-------YGVGGICNGGG-GASALVLE 402 (404)
Q Consensus 379 ~~~~~-------~gl~~~~~~gG-~~~a~ll~ 402 (404)
++++. ++|++..+|.+ ....+||+
T Consensus 351 G~ag~rQv~~a~~~l~~~~Gg~~~~~~~~v~~ 382 (386)
T PRK08313 351 GKAGEHQVDGARKALGHAYGGGSQFFSMWVVG 382 (386)
T ss_pred ccccCCcCCCccEEEEeccCCcceEEEEEEEe
Confidence 98654 45555443322 23445544
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-55 Score=426.41 Aligned_cols=342 Identities=22% Similarity=0.224 Sum_probs=271.7
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcC-CCC-CccCeEEEEeccCCCCCC-cHHHHHHHHCCCCC
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRAN-VKP-LLVQEVFFGNVLSANLGQ-APARQAALGAGIPN 88 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~ag-i~~-~~id~li~g~~~~~~~~~-~~a~~i~~~lGl~~ 88 (404)
|++|+|||+++|||+++. ++.+..+|+.+|+++||+||| +++ +|||.+++++. ..+.+. .....+...+|+.
T Consensus 3 ~~~vaIvG~g~t~~~~~~---~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~~- 77 (385)
T PRK06066 3 LNRVAIVGIGWYGFRPTT---PEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGGA- 77 (385)
T ss_pred CCcEEEEEeeecCCcCCC---CCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHcccC-
Confidence 478999999999999652 147899999999999999999 987 79999988643 212111 1223466788885
Q ss_pred CcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccc---c
Q 015576 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN---D 165 (404)
Q Consensus 89 ~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 165 (404)
..|.+.+ |+|+..++..|+.+|++|.+|+|||+++|+++.... ... . .+ ...++ .+..|+. +
T Consensus 78 ~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~-~~~-~----~~--~~~~~----~~~~p~g~~~p 142 (385)
T PRK06066 78 MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILT-FSD-V----VK--FAMDP----IYVRPIGPPNP 142 (385)
T ss_pred CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccc-hhh-h----hh--cccCc----ceecccCCCcH
Confidence 3577776 889999999999999999999999999998765211 000 0 00 00111 1222332 2
Q ss_pred -ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCC
Q 015576 166 -FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (404)
Q Consensus 166 -~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~ 244 (404)
..+++.|+|||++||+++|+++++++++|+|+.+||++. |+. ++|+||+++||
T Consensus 143 ~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~-~r~-------------------------~~t~edvl~S~ 196 (385)
T PRK06066 143 HFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSNPRAS-YAS-------------------------NISLEDVLSSE 196 (385)
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCChhh-cCC-------------------------CCCHHHHhcCC
Confidence 357999999999999999999999999999999999853 121 28999999999
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC----CCccccch--HHHHHHHHHHcCCC
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA----PEWFTTAP--SLAIPKAIANAGLE 318 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~----~~~~~~~~--~~a~~~al~~agl~ 318 (404)
+|++ |+|++|||+++|||+|+||++++.+++++.+| ++|.|++...+. +..+...+ +.+++++|+++|++
T Consensus 197 ~ia~---Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~p-v~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~ 272 (385)
T PRK06066 197 YVVY---PLTELDIAPFVDGAIVVVLASEEVAKKLTDDP-VWIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIE 272 (385)
T ss_pred cccC---CchhhccCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCC
Confidence 9998 99999999999999999999999999998888 499999886532 22222222 47999999999998
Q ss_pred --CCCcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 319 --ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 319 --~~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
++|||++|+||+|++.++.++|.||||++ |+|++||.+++|||.|+||+.+++|+++||+
T Consensus 273 ~p~~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~ 352 (385)
T PRK06066 273 SPRKEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLR 352 (385)
T ss_pred CCHHHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHc
Confidence 79999999999999999999999999983 7999999999999999999999999999999
Q ss_pred hcCCcee------EEeeecc--ccceeeeEEEe
Q 015576 379 HKKGKYG------VGGICNG--GGGASALVLEL 403 (404)
Q Consensus 379 ~~~~~~g------l~~~~~~--gG~~~a~ll~~ 403 (404)
++++.++ +.+..++ ++.+...|+|+
T Consensus 353 g~Ag~rQ~~a~~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 353 GEAGARQGKAERAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred ccccccCCCCcEEEEcCCCccCCccEEEEEEeC
Confidence 9866554 6553332 13457778775
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-54 Score=428.65 Aligned_cols=349 Identities=27% Similarity=0.348 Sum_probs=285.7
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC--CCcHHHHHHHHCCCCCCc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL--GQAPARQAALGAGIPNSV 90 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~--~~~~a~~i~~~lGl~~~~ 90 (404)
++|+|||+++|||+++. ++++.+|+.+|+++||+++|+++++||.+++|+..+... .+..+..++..+|++ ..
T Consensus 2 ~~v~IvG~~~tp~~~~~----~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~ 76 (389)
T PRK06064 2 RDVAIIGVGQTKFGELW----DVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PI 76 (389)
T ss_pred CcEEEEEcccccceecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CC
Confidence 68999999999998764 478999999999999999999999999999998765442 355788899999997 68
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|.++++++|+|++.+|..|+.+|++|.+|+|||+|.|+++..|......... ..+ ++.+ +.+.....+..|++
T Consensus 77 ~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~-~~~-----~~~~-~~~~g~~~~~~~al 149 (389)
T PRK06064 77 PATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIA-RAG-----DYEW-EEFFGATFPGLYAL 149 (389)
T ss_pred CeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhh-ccc-----cccc-ccccCCchHHHHHH
Confidence 9999999999999999999999999999999999999988755311110000 000 1111 11111111357999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCC
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG 250 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 250 (404)
.+++|+++||+++|+++++++++|+++.+||.+ +++. ++|.|+++++|++++
T Consensus 150 ~a~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a-~~~~-------------------------~~t~~~~~~s~~i~~-- 201 (389)
T PRK06064 150 IARRYMHKYGTTEEDLALVAVKNHYNGSKNPYA-QFQK-------------------------EITVEQVLNSPPVAD-- 201 (389)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcHh-hhCC-------------------------CCCHHHHhcCCcccC--
Confidence 999999999999999999999999999999983 2221 288999999999998
Q ss_pred CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC------c-cccchHHHHHHHHHHcCCCCCCcc
Q 015576 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE------W-FTTAPSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~------~-~~~~~~~a~~~al~~agl~~~dId 323 (404)
|+|++|||+++|||+++||++++.|++++.++ ++|.|++...+.+. . .......+++++|+++|++++|||
T Consensus 202 -Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did 279 (389)
T PRK06064 202 -PLKLLDCSPITDGAAAVILASEEKAKEYTDTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDID 279 (389)
T ss_pred -CCchhhcCCCCCcceEEEEecHHHHHHhcCCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCC
Confidence 89999999999999999999999999987666 69999998876432 1 123456899999999999999999
Q ss_pred eEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHHHhcC--Cc
Q 015576 324 YYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--GK 383 (404)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--~~ 383 (404)
++|+||+|++.++.++|.||||++ |+|++||.+++|||.+++|+++++|+++||++++ +.
T Consensus 280 ~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~ 359 (389)
T PRK06064 280 VAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGR 359 (389)
T ss_pred EEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999874 8999999999999999999999999999999987 54
Q ss_pred -------eeEEeeecccc-ceeeeEEEe
Q 015576 384 -------YGVGGICNGGG-GASALVLEL 403 (404)
Q Consensus 384 -------~gl~~~~~~gG-~~~a~ll~~ 403 (404)
+++++..++.+ ...++||++
T Consensus 360 rqv~~a~~~l~~~~g~~~~~~~~~vl~~ 387 (389)
T PRK06064 360 QQVIGAGYGLTHNVGGTGHTAVVHILSR 387 (389)
T ss_pred ccCCCccEEEEecCCCccceEEEEEEEe
Confidence 34454333222 345677775
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-55 Score=394.30 Aligned_cols=380 Identities=39% Similarity=0.624 Sum_probs=338.4
Q ss_pred CCceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc
Q 015576 12 ARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~ 90 (404)
..+|+||++.||+++|- ++.|++..+.+|...+.+..+++.+++|+.|..+++|+++....+..-.+..+.+.|+|...
T Consensus 35 ~~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tv 114 (435)
T KOG1389|consen 35 AEDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETV 114 (435)
T ss_pred ccCEEEEeeccchhhhcccCCcccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCccc
Confidence 34799999999999884 68899999999999999999999999999999999999998887744455666778999999
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCC-chhhhhhhcCCCCCCccccccccccccccccccccHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA-PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (404)
|..+++..|+||++++..-+..|++|.+|..|..|+|+|++. |..... .+.....--....+++ -+|+
T Consensus 115 pv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g-----~~~~~~~~~~~A~dCl------lpmG 183 (435)
T KOG1389|consen 115 PVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPG-----SINPRLQKFEKARDCL------LPMG 183 (435)
T ss_pred chhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCcc-----ccChhhhhhhHHhhcc------cccc
Confidence 999999999999999999999999999999999999999973 211110 0100001111122333 5799
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceee--eecCCCC--CCceeeccCCcccc-CCHHHHhcCC
Q 015576 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPV--EMSSGRG--KPFIIVDKDEGLEK-FDAAKLMKLR 244 (404)
Q Consensus 170 ~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~--~~~~~~~--~p~~~~~~d~~~~~-~~~~~~~~~~ 244 (404)
.+.++..+++|++|+++|++++.+++++..+.+.+.|+.||+|+ ++.+.++ +| +++..||++|| .|++.|.+.+
T Consensus 184 itsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~-i~v~~DeGiRp~ttl~~l~klk 262 (435)
T KOG1389|consen 184 ITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKP-ITVSVDEGIRPNTTLESLAKLK 262 (435)
T ss_pred cchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccc-eeEecCCCCCCCcchhHHhhcc
Confidence 99999999999999999999999999999999999999999999 5544443 45 45667999999 9999999999
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcce
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 324 (404)
|+|..+|..|..+.+.++|||+|++|+.+..|.+++.++++.++.+......|..++.++.-|+..+++.+|+..+|||+
T Consensus 263 pvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~ 342 (435)
T KOG1389|consen 263 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDL 342 (435)
T ss_pred hhhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHHHcCCCchhhhHHHHHHcCCcccccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCC--ceeEEeeeccccceeeeEEE
Q 015576 325 YEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG--KYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~--~~gl~~~~~~gG~~~a~ll~ 402 (404)
||++++|+.+.+++.+.|+++++++|+.||.+++|||.|+||+++++.+++.|++++. ++|++.+|.|.|.|.|.|+|
T Consensus 343 FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrgkd~~~GVvSmCIGtGmGaAAvFe 422 (435)
T KOG1389|consen 343 FEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFE 422 (435)
T ss_pred eehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhccccccceEEEeecCCcchheeee
Confidence 9999999999999999999999999999999999999999999999999999998865 58899999999999999999
Q ss_pred e
Q 015576 403 L 403 (404)
Q Consensus 403 ~ 403 (404)
+
T Consensus 423 r 423 (435)
T KOG1389|consen 423 R 423 (435)
T ss_pred c
Confidence 6
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=428.71 Aligned_cols=329 Identities=22% Similarity=0.250 Sum_probs=267.0
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCC--CcHHHHHHHHCCCCCC
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG--QAPARQAALGAGIPNS 89 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~--~~~a~~i~~~lGl~~~ 89 (404)
|++|+|||+++|||+|+. +++..+|+.+|+++||+++|+++++||.+++|+..+.... ...+..+...+|++ .
T Consensus 1 ~~~v~Ivg~g~tpfgr~~----~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~ 75 (389)
T PRK07516 1 MMTASIVGWAHTPFGKLD----AETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-F 75 (389)
T ss_pred CCcEEEEeCCcceeeecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-C
Confidence 368999999999999864 4889999999999999999999999999999987543321 22233344566776 6
Q ss_pred cceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhh-hhcCCCCCCcccccccccccccccc-cccc
Q 015576 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-ARKGSRLGHDTIVDGMLKDGLWDVY-NDFG 167 (404)
Q Consensus 90 ~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 167 (404)
.|+++++++|+|++.+|..|+.+|++|.+|+|||+|+|+++..|..... ...+..+. + .....+. ++..
T Consensus 76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~ 146 (389)
T PRK07516 76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYL------K---EEGDTPGGFAGV 146 (389)
T ss_pred CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhcccc------c---cccccCCCcHHH
Confidence 8999999999999999999999999999999999999999876642211 11111110 0 0000111 1246
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHH----HHhcC
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKL 243 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~----~~~~~ 243 (404)
|++.|++||++||+++|++++|++++|+|+..||.+. +++ | +|.| +++++
T Consensus 147 ~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~-~~~---~----------------------~t~~~~~~~~~~~ 200 (389)
T PRK07516 147 FGRIAQAYFQRYGDQSDALAMIAAKNHANGVANPYAQ-MRK---D----------------------LGFEFCRTVSEKN 200 (389)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcCChhh-cCC---c----------------------ccHHhhhhhhhcC
Confidence 9999999999999999999999999999999998752 221 1 4444 36778
Q ss_pred CCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----Cc-cccchHHHHHHHHHHcCC
Q 015576 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EW-FTTAPSLAIPKAIANAGL 317 (404)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~-~~~~~~~a~~~al~~agl 317 (404)
+++.+ |+|++|||+++|||+|+||++++.+++++ ++ ++|.|++...+.. +. ....+..+++++|+++|+
T Consensus 201 ~~i~~---pl~~~d~~~~~DGAaa~il~s~~~a~~~~-~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl 275 (389)
T PRK07516 201 PLVAG---PLRRTDCSLVSDGAAALVLADAETARALQ-RA-VRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGV 275 (389)
T ss_pred CcccC---CCchhhcCCcCcceEEEEEecHHHHHhcC-CC-EEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCC
Confidence 88876 99999999999999999999999999884 44 7999999875421 11 123557899999999999
Q ss_pred CCCCcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHHHh
Q 015576 318 EASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (404)
Q Consensus 318 ~~~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~ 379 (404)
+++|||++|+||+|+++++.++|.|||+++ |+|++||.+++|||.|+||+++++|+++||++
T Consensus 276 ~~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g 355 (389)
T PRK07516 276 TLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTG 355 (389)
T ss_pred CHHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999986 99999999999999999999999999999999
Q ss_pred cCCcee
Q 015576 380 KKGKYG 385 (404)
Q Consensus 380 ~~~~~g 385 (404)
+++.++
T Consensus 356 ~ag~rQ 361 (389)
T PRK07516 356 EAGGMQ 361 (389)
T ss_pred CccCCc
Confidence 876554
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-54 Score=429.22 Aligned_cols=348 Identities=22% Similarity=0.297 Sum_probs=273.2
Q ss_pred CCceEEEeeccCcc-ccC-----------CCCCCCCCHHHHHHHHHHHHHHHcCCCCCc--cCeEEEEeccCCC--CCCc
Q 015576 12 ARDVCIVGVARTPM-GGF-----------LGSLSSVSATKLGSIAIECALKRANVKPLL--VQEVFFGNVLSAN--LGQA 75 (404)
Q Consensus 12 ~~~v~ivg~~~t~~-~~~-----------~~~~~~~~~~~l~~~A~~~AL~~agi~~~~--id~li~g~~~~~~--~~~~ 75 (404)
|++|||||++|||| ++. .+.+.+.+..+|+.+|+++||+++|+++++ ||.+++|+..+.. .+++
T Consensus 11 ~~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~ 90 (438)
T PTZ00455 11 AKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGH 90 (438)
T ss_pred cCceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccc
Confidence 46899999999999 872 466678999999999999999999999999 9999999987544 3467
Q ss_pred HHHHHHHHCCCC------CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcc
Q 015576 76 PARQAALGAGIP------NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDT 149 (404)
Q Consensus 76 ~a~~i~~~lGl~------~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~ 149 (404)
.++.++..+|++ ...|+++|+.+|+|++.++..|+++|++|.+|+|||+|+|+++..|....... +....
T Consensus 91 ~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~----~~~~~ 166 (438)
T PTZ00455 91 LGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDY----LARAA 166 (438)
T ss_pred hHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhh----ccchh
Confidence 788777666555 36899999999999999999999999999999999999999998764211000 00000
Q ss_pred ccccccccccccccccccHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeecc
Q 015576 150 IVDGMLKDGLWDVYNDFGMGVCAEICANKHT-ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDK 228 (404)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg-~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~ 228 (404)
.+. ....+.+...+..+++.+ +||++|+ +|+|+++.|++++|+++..||.+...++.++ +. ...
T Consensus 167 ~~~--~~~~~~~~~~~~~~a~~~-~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t---~~---------~~~ 231 (438)
T PTZ00455 167 DYR--RQRKLDDFTFPCLFAKRM-KYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLS---LE---------FCT 231 (438)
T ss_pred hcc--ccccccCcchHHHHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCC---ce---------eec
Confidence 000 000011100122345544 9999997 9999999999999999999987532222111 00 112
Q ss_pred CCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCc----eEEEEeeEEecc----CC---
Q 015576 229 DEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQV----IAKIRGFADAAQ----AP--- 297 (404)
Q Consensus 229 d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~----~~~i~g~~~~~~----~~--- 297 (404)
|+.+| ..++++++++.+ |++++|||+++|||+|+||++++.+++++.+| .++|.+++...+ ++
T Consensus 232 d~~~~---~~e~l~s~~i~~---pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~ 305 (438)
T PTZ00455 232 GASDK---NPKFLGNETYKP---FLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDA 305 (438)
T ss_pred ccccc---chhhhcCCcccC---cCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCcccc
Confidence 22222 235677888876 89999999999999999999999999998776 689999998865 33
Q ss_pred CccccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCC------------------CCcCCCCCccccC
Q 015576 298 EWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDP------------------EQVNAHGGAVSLG 359 (404)
Q Consensus 298 ~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~------------------~~vn~~Gg~~~~G 359 (404)
..+.. ...+++++|+++|++++|||++|+||+|+++++.++|.||||+ .|+|++||.+++|
T Consensus 306 ~~~~~-~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~G 384 (438)
T PTZ00455 306 TRMFT-SRAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFG 384 (438)
T ss_pred ccchH-HHHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcC
Confidence 22222 2689999999999999999999999999999999999999998 4999999999999
Q ss_pred CcccchHHHHHHHHHHHHHhcCCcee
Q 015576 360 HPLGCSGARILVTLLGVLRHKKGKYG 385 (404)
Q Consensus 360 h~~gasG~~~l~~~~~~l~~~~~~~g 385 (404)
||.|+||+++++|+++||++++++++
T Consensus 385 HP~gAtG~~~v~e~~~QLrg~ag~~Q 410 (438)
T PTZ00455 385 HPVGATGVKQIMEVYRQMKGQCGEYQ 410 (438)
T ss_pred CCcchHHHHHHHHHHHHHhhccccCC
Confidence 99999999999999999998876543
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-54 Score=421.73 Aligned_cols=344 Identities=18% Similarity=0.165 Sum_probs=275.0
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~ 91 (404)
..+|+|||+++|+|+++.+ .+..+|+.+|+++||+||||+++|||.+++.... .+. ....++..+|++ ..+
T Consensus 4 ~~~vaIvG~g~t~~~~~~~----~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~-~~~~~~~~lGl~-~~~ 74 (388)
T PRK08142 4 KGKAYIVGAYEHPTRKAPD----KSVAQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGL-GPASMVDYLGLK-LRH 74 (388)
T ss_pred CCCEEEEEEeeccceeCCC----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCc-cHHHHHHhCCCC-Cee
Confidence 4689999999999998754 7889999999999999999999999997652111 111 123588999996 468
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhh-hhhcCCCCCCccccccccccccccc---ccccc
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLA-EARKGSRLGHDTIVDGMLKDGLWDV---YNDFG 167 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 167 (404)
...++.+|+|+..++..|+..|++|.+|+|||+++|+++....... ...+... ..+ ..+..+ ..+..
T Consensus 75 ~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~g~~~~~~ 145 (388)
T PRK08142 75 VDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGAD-----APD----APFEAPYGPTTHNL 145 (388)
T ss_pred eccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCcccccccccccc-----ccc----cchhcccccccHHH
Confidence 8899999999999999999999999999999999998754211000 0000000 000 011112 22468
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCc
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~ 247 (404)
+++.+++||++||+++|+++.+++++|+|+..||.+. +++ ++|+|+++++|+|+
T Consensus 146 ~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~-~r~-------------------------~~t~e~vl~s~~Ia 199 (388)
T PRK08142 146 YAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAM-LRD-------------------------VVTVEDVLNSPMIA 199 (388)
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHhccCChhh-cCC-------------------------CCCHHHHhcCCccc
Confidence 9999999999999999999999999999999999852 221 28999999999999
Q ss_pred CCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC-----CCccccchHHHHHHHHHHcCCCCCCc
Q 015576 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~dI 322 (404)
+ |+|++|||+++|||+|+||++++.+++++.++ ++|.|++..++. ++......+.+++++|+++|++++||
T Consensus 200 ~---Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~di 275 (388)
T PRK08142 200 D---PLHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADI 275 (388)
T ss_pred C---CchhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHC
Confidence 8 99999999999999999999999999987555 899999987542 22223345689999999999999999
Q ss_pred ceEeecccchHHHHHHHHHhCCCCC-------------------CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCC-
Q 015576 323 DYYEINEAFSVVAIANQKLLGLDPE-------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG- 382 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lg~~~~-------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~- 382 (404)
|++|+||||++.++.++|.||||++ |+|++||.++.|||.|+||+.+++|+++|||++++
T Consensus 276 d~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~ 355 (388)
T PRK08142 276 KYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHP 355 (388)
T ss_pred CEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999864 89999999999999999999999999999998853
Q ss_pred -------ceeEEeeecccc----ceeeeEEEe
Q 015576 383 -------KYGVGGICNGGG----GASALVLEL 403 (404)
Q Consensus 383 -------~~gl~~~~~~gG----~~~a~ll~~ 403 (404)
+++|++..++.. ....+||++
T Consensus 356 ~rQV~~a~~gl~~~~Gg~~~~~~~~~~~vl~~ 387 (388)
T PRK08142 356 AVQVPNCDLALAHGTGGLLGSRHGSATLILER 387 (388)
T ss_pred CCCCCCCcEEEEeCCCCCCcCCCceEEEEEec
Confidence 456666443311 125566653
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-53 Score=419.23 Aligned_cols=325 Identities=27% Similarity=0.330 Sum_probs=276.0
Q ss_pred EeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcc
Q 015576 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK 97 (404)
Q Consensus 18 vg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~ 97 (404)
||+++|||+++. ++++.+|+.+|+++||+|+|+++++||.+++++..+....++++..++..+|++ ..+.++++.
T Consensus 1 vG~g~t~~~~~~----~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~ 75 (375)
T cd00829 1 VGVGMTPFGRRS----DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA 75 (375)
T ss_pred CeeeecCcccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC
Confidence 689999999874 489999999999999999999999999999998877654567889999999997 789999999
Q ss_pred cCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHH
Q 015576 98 VCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICAN 177 (404)
Q Consensus 98 aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 177 (404)
+|+|++.++..|+++|++|.+|+|||+|+|+++..|.... . .. ... ....+ ....+.....+..|++.+++|++
T Consensus 76 ~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~-~-~~-~~~-~~~~~--~~~~~~~~~~~~~~al~a~~~~~ 149 (375)
T cd00829 76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDE-A-GG-RAS-DLEWE--GPEPPGGLTPPALYALAARRYMH 149 (375)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccch-h-hc-ccc-chhhh--hcccccCCChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998653110 0 00 000 00000 00011111113679999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCC
Q 015576 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGN 257 (404)
Q Consensus 178 ~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 257 (404)
+||+++|+++.|++++|+++.+||++ +|+. ++|+|+++++||+++ |+|++|
T Consensus 150 ~~g~t~e~~~~va~~~~~~A~~np~A-~~~~-------------------------~~t~d~~~~~~~i~~---pl~~~~ 200 (375)
T cd00829 150 RYGTTREDLAKVAVKNHRNAARNPYA-QFRK-------------------------PITVEDVLNSRMIAD---PLRLLD 200 (375)
T ss_pred HhCCCHHHHHHHHHHHHHHHhcCChh-hcCC-------------------------CCCHHHHhcCCcccC---CCchhh
Confidence 99999999999999999999999885 3332 278999999999997 999999
Q ss_pred CCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc-------cccchHHHHHHHHHHcCCCCCCcceEeeccc
Q 015576 258 ASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-------FTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (404)
Q Consensus 258 ~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~-------~~~~~~~a~~~al~~agl~~~dId~~~~hd~ 330 (404)
||+++|||+|+||++++.++++ .++.++|.|++...+.+.. ....+..+++++|+++|++++|||++|+||+
T Consensus 201 ~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~ 279 (375)
T cd00829 201 CCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDC 279 (375)
T ss_pred cCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCc
Confidence 9999999999999999999998 5666999999998775543 3456688999999999999999999999999
Q ss_pred chHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCc
Q 015576 331 FSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGK 383 (404)
Q Consensus 331 ~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~ 383 (404)
|+++.+.++|.||||++ |+|++||.+++|||.|++|+++++++++||+++.+.
T Consensus 280 F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ag~ 350 (375)
T cd00829 280 FTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEAGA 350 (375)
T ss_pred ChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999983 899999999999999999999999999999998543
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-53 Score=416.73 Aligned_cols=348 Identities=32% Similarity=0.451 Sum_probs=279.8
Q ss_pred EeeccCccccCC---CCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHH-HHHHCCCCCCccee
Q 015576 18 VGVARTPMGGFL---GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQ-AALGAGIPNSVVCT 93 (404)
Q Consensus 18 vg~~~t~~~~~~---~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~-i~~~lGl~~~~~~~ 93 (404)
+|++||||+++. +.+....+.+|+.+|+++||++++++|++||.+++|+..+.+.++.++.. +...+|+. +.|++
T Consensus 1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~ 79 (393)
T cd00826 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAI 79 (393)
T ss_pred CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEE
Confidence 589999999976 66678899999999999999999999999999999999887666667764 55567775 68999
Q ss_pred eEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccc-ccc-ccccccccHHHH
Q 015576 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLK-DGL-WDVYNDFGMGVC 171 (404)
Q Consensus 94 ~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~ 171 (404)
+|+++|+|++.++..|+.+|++|.+|++||+|+|++|..|..... ....+++.. .+. .....+..+++.
T Consensus 80 ~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~---------~~~~~~~~~~~~~r~~~~~~a~~s~~ 150 (393)
T cd00826 80 GMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAK---------EKHIDVLINKYGMRACPDAFALAGQA 150 (393)
T ss_pred EecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccc---------cchhHHHHHHhCChhhccHHHHHHHH
Confidence 999999999999999999999999999999999999875521100 000011000 000 011123678888
Q ss_pred HHHHHHHcCCCHHHHHHHHHHH---HHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCc
Q 015576 172 AEICANKHTITRDEQDSYAIRS---FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (404)
Q Consensus 172 a~~~~~~yg~~~~~~a~~~~~~---~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~ 247 (404)
+++|+++||+++|+++.+++++ +.++..||. ..+++ +|+|++++++|++
T Consensus 151 ~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~---------------------------a~~~~~~t~e~~~~~~~i~ 203 (393)
T cd00826 151 GAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEY---------------------------IQFGDEASLDEIAKLRPAF 203 (393)
T ss_pred HHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCC---------------------------CCCCCCCCHHHHhcCCCcc
Confidence 8899999999998888777765 333433333 22233 8999999999998
Q ss_pred CCCCccccCCCCccccccceeeecCHHHHHHcCC--CceEEEEeeEEec------cCCC----ccccchHHHHHHHHHHc
Q 015576 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGL--QVIAKIRGFADAA------QAPE----WFTTAPSLAIPKAIANA 315 (404)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~--~~~~~i~g~~~~~------~~~~----~~~~~~~~a~~~al~~a 315 (404)
.+++|+|++|||+++|||+|+||++++.+++++. ++ ++|.+.+... ..+. .+...++.+++++|+++
T Consensus 204 ~~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~-v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~A 282 (393)
T cd00826 204 DKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKA-REIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKA 282 (393)
T ss_pred CCCCCEechhcCCcCCCeEEEEEecHHHHHHcCCcccc-cccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHc
Confidence 5567999999999999999999999999999874 33 4555554432 2333 34456789999999999
Q ss_pred CCCCCCcceEeecccchHHHHHHHHHhCCCC------------------CCcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 316 GLEASQIDYYEINEAFSVVAIANQKLLGLDP------------------EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 316 gl~~~dId~~~~hd~~~~~~~~~~e~lg~~~------------------~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
|++++|||++|+||+|+++++.++|.||||+ .|+|++||.+++|||.|+||+++++|+++||
T Consensus 283 gi~~~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL 362 (393)
T cd00826 283 GLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFEL 362 (393)
T ss_pred CCCHHHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 5999999999999999999999999999999
Q ss_pred HhcCCc-----eeEEeeeccccceeeeEEEe
Q 015576 378 RHKKGK-----YGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 378 ~~~~~~-----~gl~~~~~~gG~~~a~ll~~ 403 (404)
++++++ .++...|++||.+.++|||.
T Consensus 363 ~g~ag~~q~~~~~~~~~~~~Gg~g~a~~~~~ 393 (393)
T cd00826 363 KGEAGKRQGAGAGLALLCIGGGGGAAMCIES 393 (393)
T ss_pred hhhhccccCCCcCEEEEEcCCCceeEEEEeC
Confidence 988553 45777889999999999984
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-52 Score=406.39 Aligned_cols=340 Identities=20% Similarity=0.178 Sum_probs=267.1
Q ss_pred CceEEEeeccCccccCCCCCCCCCH-HHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCc-HHHHHHHHCCCCCCc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSA-TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQA-PARQAALGAGIPNSV 90 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~-~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~-~a~~i~~~lGl~~~~ 90 (404)
++|+|||+++|||+++.. +.+. .+|+.+|+++||+|||++++|||.++.+.. ....+.. ........+|+.+..
T Consensus 2 ~~vaIvG~g~t~~~~~~~---~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~ 77 (352)
T PRK07937 2 RDVAVVGFAQAPHVRRTD---GTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPI 77 (352)
T ss_pred CcEEEEEeeccccccCCC---CCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCC
Confidence 789999999999998742 2444 899999999999999999999998864432 2222221 222345667874345
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|...++ +++..++..|+.+|++|.+|+|||+++|+++....... ... ..+++....+. ...+..+++
T Consensus 78 ~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~-------~~~--~~~~~~~~p~G-~~~~~~~Al 144 (352)
T PRK07937 78 NESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRV-------LAL--QLDPYTVAPLW-PDSVSMAGL 144 (352)
T ss_pred ceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhh-------hhc--cCCcceeccCC-CchHHHHHH
Confidence 666666 46888999999999999999999999998753111000 000 01111111111 112467999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCC
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG 250 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 250 (404)
.+++||++||.++|+++++++++|+|+..||++ .+| +|+||+++||+|++
T Consensus 145 ~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A---------------------------~~r-it~edvl~s~~ia~-- 194 (352)
T PRK07937 145 QARAGLDAGKWTEEQMAEVAARSRADARRNPSA---------------------------EPS-ISVDELLARPYFAD-- 194 (352)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchh---------------------------hcc-CCHHHHhcCCcccC--
Confidence 999999999999999999999999999999984 223 78999999999998
Q ss_pred CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc--ccchHHHHHHHHHHc-CCCCCCcceEee
Q 015576 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF--TTAPSLAIPKAIANA-GLEASQIDYYEI 327 (404)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~--~~~~~~a~~~al~~a-gl~~~dId~~~~ 327 (404)
|+|++|||+++|||+|+||++++.+++++.+| ++|.|++...+..... ......+++++++++ |++++|||++|+
T Consensus 195 -PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~Ei 272 (352)
T PRK07937 195 -PLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESPSLGARDLTRSPSTALAAEAATGGDAGGVDVAEL 272 (352)
T ss_pred -CchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCccccccccccHHHHHHHHHHhcCCCHHHCCEEEE
Confidence 99999999999999999999999999998888 8999999976533211 123356667777775 999999999999
Q ss_pred cccchHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccc--cceeeeEEE
Q 015576 328 NEAFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG--GGASALVLE 402 (404)
Q Consensus 328 hd~~~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~g--G~~~a~ll~ 402 (404)
||+|++.++.++|.|||+.+ |+|++||.++ |||.|+||+.+++|+++||++++.+++|++..+|. .....+|+|
T Consensus 273 ~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~-ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~Gg~~~~~~~v~v~~ 349 (352)
T PRK07937 273 HAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERIGEAARHIWDGSARRALAHATSGPALQQNLVAVLE 349 (352)
T ss_pred eCCChHHHHHHHHHcCCCCCCCcCCCccchh-cCchhHHHHHHHHHHHHHHhccCCCEEEEecccccccceEEEEEEe
Confidence 99999999999999999764 9999999999 99999999999999999999999999998755441 234556666
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-53 Score=415.78 Aligned_cols=378 Identities=45% Similarity=0.645 Sum_probs=334.2
Q ss_pred CCceEEEeeccCccccCC-CCCCCCCHHHHHHHHHHHHHHHc--CCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCC
Q 015576 12 ARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRA--NVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIP 87 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~-~~~~~~~~~~l~~~A~~~AL~~a--gi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~ 87 (404)
+++|+|+|+++|||+++. +++.+..+.++.....+..+++. ++++.+||.+++|++.+.. .+++.++.++..+|++
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 478999999999999996 77888888888877777777543 6777789999999998875 6788999999999998
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccccc
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (404)
.+.|.++|+.+|+|++.++..|++.|++|.+|++|++|+|+||+.|.. +++.+.... ..|++..+++.+++.+..
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~----~~~~~~~~~-~~d~~~~~~~~~~~~~~~ 155 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMG----REGVRVLDS-AVDPMFEDPLGDATPGYL 155 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCcc----ccchhhhhh-hhhhccccccccccchhH
Confidence 669999999999999999999999999999999999999999998863 122222221 345566667777777789
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc---CCHHHHhcCC
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK---FDAAKLMKLR 244 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~---~~~~~~~~~~ 244 (404)
|++.|++|+++||+|||++|+|++++|+|+.+||++++| ++|+|+++... + +..|+..|. .+.|.+...+
T Consensus 156 ~g~~A~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~~---~---~~~dp~~r~d~~~~~dg~a~l~ 228 (392)
T COG0183 156 MGLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS---P---VVADPLRRLDCSPTSDGAAALV 228 (392)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecCC---c---eecCCcccCCCCCChhhhcCce
Confidence 999999999999999999999999999999999999988 88999876444 4 677777775 8899999999
Q ss_pred CCcCCC-CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCC-CCCc
Q 015576 245 PSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLE-ASQI 322 (404)
Q Consensus 245 ~~~~~~-g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~-~~dI 322 (404)
|.++.. |.++..+.+.+.||++++++.+.+.+++++..+++++.++..+..+|..+ ..+..++.++|+++++. .+||
T Consensus 229 ~a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edl 307 (392)
T COG0183 229 PAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDL 307 (392)
T ss_pred eccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhc
Confidence 999765 68999999999999999999999999999999999999999988888776 77889999999999999 9999
Q ss_pred ceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCC----ceeEEeeecccc-cee
Q 015576 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG----KYGVGGICNGGG-GAS 397 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~----~~gl~~~~~~gG-~~~ 397 (404)
|++|.++.|..+.+...+.+|. .|+|++||.++.|||.||||++++.++++||+++.. ++++++.|.||| +++
T Consensus 308 gl~e~nEafa~~~~~~~~~~G~--~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~~~~~~~~~~g~~t~~~Ggg~~g~ 385 (392)
T COG0183 308 GLAEKGEAFAAVALGVTKILGD--LPVNPSGGAIALGHPIGATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGV 385 (392)
T ss_pred CceecChHHHHHHHhhHHhcCC--ceeCCCcchhhcCCCccchHHHHHHHHHHHHhhccccccccceeeEEEecCcceeE
Confidence 9999999999999999999998 799999999999999999999999999999999766 789999999999 999
Q ss_pred eeEEEeC
Q 015576 398 ALVLELM 404 (404)
Q Consensus 398 a~ll~~~ 404 (404)
+++||+.
T Consensus 386 a~vl~~~ 392 (392)
T COG0183 386 AAVLERV 392 (392)
T ss_pred EEEEecC
Confidence 9999974
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-51 Score=400.72 Aligned_cols=342 Identities=19% Similarity=0.159 Sum_probs=266.0
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~ 91 (404)
.++|+|||+++|+|+++. +.+..+|+.+|+++||+|||+++++||.+++++. . . . ....++..+|+++..+
T Consensus 3 ~~~v~IvG~g~t~~~r~~----~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~-~--~~~~l~~~lGl~~~~~ 73 (386)
T PRK07855 3 SGKAAIVGIGATEFSKNS----GRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-T-N--PEIAVARALGIGELKF 73 (386)
T ss_pred CCCEEEEEeeecccccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-c-c--cHHHHHHHCCCCCCcc
Confidence 468999999999998874 3789999999999999999999999999987443 1 1 1 1245888999963356
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccc--cccCCchhhhhhhcCCCCCCccccccccccccccccc----c
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME--SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN----D 165 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e--~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 165 (404)
..+++.+|+|+..++..|+..|++|.+|+|||+++. ........... .+.... ........+..++. +
T Consensus 74 ~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~g~~~~~ 147 (386)
T PRK07855 74 FSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQT-----GLAENP-TSTGVDYGWSYPHGLLTPA 147 (386)
T ss_pred eeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccc-----cccccc-cccccchhhhhhcCCCChH
Confidence 678999999999999999999999999999999983 22110000000 000000 00000011222221 2
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
..+++.+++||++||.++|+++++++++|+|+.+||.+.+.+ +++|+|+++++|+
T Consensus 148 ~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~-------------------------~~~t~e~vl~s~~ 202 (386)
T PRK07855 148 AWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYG-------------------------RPITLEDHQNSRW 202 (386)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcC-------------------------CCCCHHHHhcCCc
Confidence 469999999999999999999999999999999999852211 1289999999999
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC---------ccc--cchHHHHHHHHHH
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE---------WFT--TAPSLAIPKAIAN 314 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~---------~~~--~~~~~a~~~al~~ 314 (404)
|++ |+|++|||+++|||+|+||++++.+++++.+| ++|.|++...+... ... ...+.+++++|++
T Consensus 203 Ia~---Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~ 278 (386)
T PRK07855 203 IAE---PLRLLDCCQESDGAVALVVTSAERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQ 278 (386)
T ss_pred ccC---CchhhhcCCcCCceEEEEEecHHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHH
Confidence 998 99999999999999999999999999998787 69999988653210 111 1234799999999
Q ss_pred cCCCCCCcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 315 agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
+|++++|||++|+||+|++.++.++|.||||++ |+|++||+++.|||. |+.+++|+++|
T Consensus 279 AGi~~~DiDv~El~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~Q 355 (386)
T PRK07855 279 SGLGPADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQ 355 (386)
T ss_pred cCCCHHHCcEEEeccCCcHHHHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHH
Confidence 999999999999999999999999999999975 999999999999986 89999999999
Q ss_pred HHhcCC------ceeEEeeeccccceeeeEE
Q 015576 377 LRHKKG------KYGVGGICNGGGGASALVL 401 (404)
Q Consensus 377 l~~~~~------~~gl~~~~~~gG~~~a~ll 401 (404)
||++++ +++|++.. ||-...++||
T Consensus 356 LrG~a~~QV~~a~~gl~~~~-Gg~~~~~~~~ 385 (386)
T PRK07855 356 LRGTSVNQVPGVENVLVTAG-TGVPTSGLIL 385 (386)
T ss_pred HhCCCcccCCCCcEEEEECC-CCccceeEEe
Confidence 997653 45666533 2224455655
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-49 Score=396.11 Aligned_cols=358 Identities=20% Similarity=0.109 Sum_probs=276.5
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC--CCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCC
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVK--PLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~--~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~ 89 (404)
.++++|||+++|+|+++... ...++.+|+.+|+++||+|+|++ +++||.+++++.... ...+.+..++..+|+.+
T Consensus 3 ~~~~~IVGvG~t~~~~~~~~-~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~lGl~p- 79 (498)
T PRK08257 3 PRTPVIVGVGQVTERPDDPA-YGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERLGADP- 79 (498)
T ss_pred CCcEEEEEeeecccccCCcc-cCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHcCCCC-
Confidence 47899999999999875321 11388999999999999999999 999999998877543 23345678999999964
Q ss_pred cceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCC--cc----ccccc-cccccccc
Q 015576 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGH--DT----IVDGM-LKDGLWDV 162 (404)
Q Consensus 90 ~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~--~~----~~~~~-~~~~~~~~ 162 (404)
.+......+|.++..++..|+.+|++|.+|+|||+|+|++++.+..........+... .. ..... ....+..+
T Consensus 80 ~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (498)
T PRK08257 80 ARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELR 159 (498)
T ss_pred cceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhh
Confidence 4555667788899999999999999999999999999998764321110000000000 00 00000 00011112
Q ss_pred c---c-cccHHHHHHHHHHHcCCCHHH----HHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc
Q 015576 163 Y---N-DFGMGVCAEICANKHTITRDE----QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK 234 (404)
Q Consensus 163 ~---~-~~~~~~~a~~~~~~yg~~~~~----~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~ 234 (404)
+ . ...+++.+++||++||.++|+ ++.+.+++++++.+||++. +++ +
T Consensus 160 ~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~-~r~-------------------------~ 213 (498)
T PRK08257 160 HGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAW-IPR-------------------------E 213 (498)
T ss_pred cCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHh-hCC-------------------------C
Confidence 2 1 257999999999999999998 3455558999999999852 221 2
Q ss_pred CCHHHHh----cCCCCcCCCCccccCCCCc-cccccceeeecCHHHHHHcC---CCceEEEEeeEEeccCCC-----ccc
Q 015576 235 FDAAKLM----KLRPSFKEGGSVTAGNASI-ISDGAAALVLVSGVKALELG---LQVIAKIRGFADAAQAPE-----WFT 301 (404)
Q Consensus 235 ~~~~~~~----~~~~~~~~~g~~~~~~~~~-~~DGAaA~vL~~~~~a~~~~---~~~~~~i~g~~~~~~~~~-----~~~ 301 (404)
+|.|+++ ++|+|++ |+++++||+ .+|||+|+||++++.|++++ .++ ++|.|++..++... .+.
T Consensus 214 ~t~eevl~~~~~~rmIa~---Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~-V~i~g~a~~~~~~~~~~r~~~~ 289 (498)
T PRK08257 214 RSAEEIVTPTPDNRMIAW---PYTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRW-VYLHGGADAHDPYDILERPDLH 289 (498)
T ss_pred CCHHHHhcccCCCCeeeC---CccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCce-EEEEEEEEeeCccccccccccc
Confidence 8899999 7999998 999999996 89999999999999999997 344 79999998865321 111
Q ss_pred c--chHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCC---CcCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 302 T--APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE---QVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 302 ~--~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~---~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
. ..+.+++++|+++|++++|||++|+||||++.++.++|.||||++ |+|++||++++|||++++|+.+++|+++|
T Consensus 290 ~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 290 RSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred cChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHH
Confidence 1 224699999999999999999999999999999999999999988 99999999999999999999999999999
Q ss_pred HHhcCCceeEEeeeccccc-eeeeEEE
Q 015576 377 LRHKKGKYGVGGICNGGGG-ASALVLE 402 (404)
Q Consensus 377 l~~~~~~~gl~~~~~~gG~-~~a~ll~ 402 (404)
||++++++||++..+|.+. ...+|++
T Consensus 370 LRg~~~~~gLv~~~GG~~~~~~~~vl~ 396 (498)
T PRK08257 370 LRANPGRRGLVTANGGYLTKHSVGVYS 396 (498)
T ss_pred HhhcCCCEEEEECCCChhhceEEEEEe
Confidence 9999999999875544333 3344554
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-48 Score=343.57 Aligned_cols=347 Identities=27% Similarity=0.340 Sum_probs=280.6
Q ss_pred ceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCccee
Q 015576 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT 93 (404)
Q Consensus 14 ~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~ 93 (404)
+|||||+++|.|.+. +...+....+|+.+|+..||+|+++.-++|+.-++|...++. ....+.-..+|++ .+|.+
T Consensus 7 rvyvvgvgmtkf~kp-g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~ 81 (408)
T KOG1406|consen 7 RVYVVGVGMTKFEKP-GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIY 81 (408)
T ss_pred eEEEEecceeeecCC-CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-Cccee
Confidence 799999999999876 456778889999999999999999999999998888887654 2233444468887 79999
Q ss_pred eEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccc----c-cccc-ccccccc
Q 015576 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGML----K-DGLW-DVYNDFG 167 (404)
Q Consensus 94 ~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~----~-~~~~-~~~~~~~ 167 (404)
.|++.|+++..+|..|.+.|++|..|+||+.|+|+|+..........+. + ..|..+ . .++. -|..++.
T Consensus 82 nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra--~----p~dkhi~~m~e~ygl~a~pmaaqm 155 (408)
T KOG1406|consen 82 NVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRA--L----PVDKHISVMSETYGLEAAPMAAQM 155 (408)
T ss_pred eccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhcc--C----cchhhHHHHHhhccCCCCcchHHH
Confidence 9999999999999999999999999999999999998632211100000 0 001100 0 0111 2334577
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCC
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~ 246 (404)
|+..++++|++||..+|++++++.++|++...||.. .+|. +++|+++++|-+
T Consensus 156 fgnagkehmekygtk~ehfakiawknhkhsvnnpys---------------------------qf~deysldqvm~s~~v 208 (408)
T KOG1406|consen 156 FGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYS---------------------------QFRDEYSLDQVMKSPQV 208 (408)
T ss_pred hhhhHHHHHHHhCCCHHHHhHhhhhccccccCChhH---------------------------hhhhhccHHHHhcchHH
Confidence 888899999999999999999999998887776652 2233 999999999999
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCc-eEEEEeeEEeccCCCcccc----------chHHHHHHHHHHc
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQV-IAKIRGFADAAQAPEWFTT----------APSLAIPKAIANA 315 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~-~~~i~g~~~~~~~~~~~~~----------~~~~a~~~al~~a 315 (404)
++ +++.+.|||.+||++|.||.++...++++... -++|+|....+|.|+.+.. ..+.+.++++++.
T Consensus 209 ~d---flt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aks 285 (408)
T KOG1406|consen 209 VD---FLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKS 285 (408)
T ss_pred HH---HHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHc
Confidence 98 99999999999999999999999998887532 2478888888877665432 2368999999999
Q ss_pred CCCCCCcceEeecccchHHHHHHHHHhCCCCC------------------CcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 316 GLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 316 gl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
|++|+||+++|+||||+..+++.+|+||+|++ -||++||+++.|||.||||+.+-+|+..||
T Consensus 286 gltpndvqvielhdcfs~nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwql 365 (408)
T KOG1406|consen 286 GLTPNDVQVIELHDCFSANELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQL 365 (408)
T ss_pred CCCcccceEEEeecccchhhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHH
Confidence 99999999999999999999999999999986 689999999999999999999999999999
Q ss_pred HhcCCceeE-------EeeeccccceeeeEE
Q 015576 378 RHKKGKYGV-------GGICNGGGGASALVL 401 (404)
Q Consensus 378 ~~~~~~~gl-------~~~~~~gG~~~a~ll 401 (404)
|+.+++|++ -+..+-||..+..|.
T Consensus 366 rg~agkrqvpnakvalqhnlgiggavvv~ly 396 (408)
T KOG1406|consen 366 RGLAGKRQVPNAKVALQHNLGIGGAVVVALY 396 (408)
T ss_pred hhhhccccCCCchhhhhhccCcCceeEEEEe
Confidence 999988775 333444555444443
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=352.04 Aligned_cols=262 Identities=49% Similarity=0.743 Sum_probs=225.2
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~ 91 (404)
|++||||++.||||+++.+.+++.++.+|+.++++++|+++++++++||.+++|++.+...+++++++++...|++..+|
T Consensus 1 M~~v~Iv~a~RTPfg~~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp 80 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGKFGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP 80 (264)
T ss_dssp -TTEEEEEEEEE--ECTTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE
T ss_pred CCCEEEEEeeeCccccCCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc
Confidence 68999999999999999999999999999999999999999999999999999999998789999999999999988899
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHH
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (404)
+++|+++|+||+.|+..|+..|++|.+|++|++|+|+||+.|......+++..++.....+....+++.+++....|+..
T Consensus 81 ~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg~t 160 (264)
T PF00108_consen 81 ATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMGIT 160 (264)
T ss_dssp EEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHHHH
T ss_pred eeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999887765556666666555666666677888888999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCC
Q 015576 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (404)
Q Consensus 172 a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~ 250 (404)
|++++++||+|||++|+|++++|+++.++...++|++||+|++++..++.+ .++++||.+|+ +|+|+|.+++|++.++
T Consensus 161 AE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~g~~-~~~~~De~~r~~~~~e~l~~L~p~f~~~ 239 (264)
T PF00108_consen 161 AENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKKGEE-VTVDRDEGIRPDTTLEKLAKLKPAFRKD 239 (264)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETTSEE-EEE-S-STCGTT--HHHHHTS-BSSSTT
T ss_pred cccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccccce-eeeeccchhhcchhHHHHhccccccccc
Confidence 999999999999999999999999999999999999999999998877765 56999999999 9999999999999987
Q ss_pred -CccccCCCCccccccceeeecCHH
Q 015576 251 -GSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 251 -g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
|.+|..++|+++|||+++||++++
T Consensus 240 ~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 240 GGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp TSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccCCCccchhheEEEeecC
Confidence 999999999999999999999875
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=335.27 Aligned_cols=390 Identities=31% Similarity=0.465 Sum_probs=336.1
Q ss_pred CCCCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCC
Q 015576 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (404)
Q Consensus 9 ~~~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~ 88 (404)
++++++|++|..-||||-.....+++.-+.+|+.++.+..|++..++.+.+|.+|+|++..+....+.++..+...|++.
T Consensus 38 ~kn~~nivlvdgvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsd 117 (465)
T KOG1392|consen 38 KKNMPNIVLVDGVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSD 117 (465)
T ss_pred ccCCCceEEEecccCceeecccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCC
Confidence 34688999999999999777667889999999999999999999999999999999999998888899999999999998
Q ss_pred CcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhh-hhc-------CCCCCCccccccccccccc
Q 015576 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-ARK-------GSRLGHDTIVDGMLKDGLW 160 (404)
Q Consensus 89 ~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~ 160 (404)
..|..+|..+|-|+..|+.+...+|++|.+|+++.+|+|.+|++|....+ .|. ....+......+.+...|.
T Consensus 118 ktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nfl 197 (465)
T KOG1392|consen 118 KTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFL 197 (465)
T ss_pred CCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhcc
Confidence 99999999999999999999999999999999999999999999865433 111 1122222211121211111
Q ss_pred --------cccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcc
Q 015576 161 --------DVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL 232 (404)
Q Consensus 161 --------~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~ 232 (404)
+..+...|+..++|+..-+.++|.++|+|++++|--+..+...+.|.+ .+|+.++..... .++|.++
T Consensus 198 apelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~~----t~kdngi 272 (465)
T KOG1392|consen 198 APELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDPK----TIKDNGI 272 (465)
T ss_pred CcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCcc----eecCCCc
Confidence 122457899999999999999999999999999999999999998874 578877655553 4589999
Q ss_pred ccCCHHHHhcCCCCcC-CCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC-ccccchHHHHHH
Q 015576 233 EKFDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-WFTTAPSLAIPK 310 (404)
Q Consensus 233 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~-~~~~~~~~a~~~ 310 (404)
|..+.|++..++|.|- +-|.++..+.+.+.|||.|.+++++|.+...+.+|.++++.+-+.+.+|. ....++...+.+
T Consensus 273 rvssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgpay~ipk 352 (465)
T KOG1392|consen 273 RVSSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGPAYVIPK 352 (465)
T ss_pred ccCCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecccccccHH
Confidence 9999999999999775 56999999999999999999999999999999999999999988876664 455678889999
Q ss_pred HHHHcCCCCCCcceEeecccchHHHHHHHHHhCC---CC--------------CCcCCCCCccccCCcccchHHHHHHHH
Q 015576 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DP--------------EQVNAHGGAVSLGHPLGCSGARILVTL 373 (404)
Q Consensus 311 al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~---~~--------------~~vn~~Gg~~~~Gh~~gasG~~~l~~~ 373 (404)
+|+++|++.+|||.||+|+.|+-+.+...+++.- |. +++|.+||.+++|||+|++|.+.....
T Consensus 353 ll~kagltlkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~ 432 (465)
T KOG1392|consen 353 LLDKAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHS 432 (465)
T ss_pred HHHHcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHH
Confidence 9999999999999999999999998877666542 11 378999999999999999999999999
Q ss_pred HHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 374 LGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 374 ~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..+|+.++|.+|++..|..||+|++||+|.
T Consensus 433 anrl~~e~gqygvvaacaaggqgvamliea 462 (465)
T KOG1392|consen 433 ANRLKEEKGQYGVVAACAAGGQGVAMLIEA 462 (465)
T ss_pred HhHHHhhcCceeEeehhhcCCcceEEEeec
Confidence 999999999999999999999999999995
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=242.03 Aligned_cols=235 Identities=33% Similarity=0.379 Sum_probs=210.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHc
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~a 115 (404)
+..+|+.+|++++|+++|+++++||.++++++.++...+..+.+++..+|++ ++++++++.+|+|++.+|+.|+++|++
T Consensus 6 ~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHHC
Confidence 4789999999999999999999999999999988766677889999999997 789999999999999999999999999
Q ss_pred CCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 015576 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (404)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~ 195 (404)
|+++.+||+++|. .
T Consensus 85 g~~~~~lv~~~e~--~---------------------------------------------------------------- 98 (254)
T cd00327 85 GKADIVLAGGSEE--F---------------------------------------------------------------- 98 (254)
T ss_pred CCCCEEEEEecce--e----------------------------------------------------------------
Confidence 9999999999996 0
Q ss_pred HHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHH
Q 015576 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (404)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~ 275 (404)
+ ++|||+|+||++++.
T Consensus 99 ---------------------------------------------------------~-------~gdGAaa~vL~~~~~ 114 (254)
T cd00327 99 ---------------------------------------------------------V-------FGDGAAAAVVESEEH 114 (254)
T ss_pred ---------------------------------------------------------e-------ecceEEEEEECcHHH
Confidence 0 599999999999999
Q ss_pred HHHcCCCceEEEEeeEEeccCCC----ccccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCC---
Q 015576 276 ALELGLQVIAKIRGFADAAQAPE----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQ--- 348 (404)
Q Consensus 276 a~~~~~~~~~~i~g~~~~~~~~~----~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~--- 348 (404)
+++++.+++.++.++....+.+. .......++++++|+++|++++|||++++|+.++.....+.+.++++..+
T Consensus 115 a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 194 (254)
T cd00327 115 ALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRS 194 (254)
T ss_pred HHHCCCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCC
Confidence 88888889899999887765443 23345688999999999999999999999999999988888989887654
Q ss_pred cCCCCCccccCCcccchHHHHHHHHHHHHHhc-------CCceeEEeeeccccceeeeEE
Q 015576 349 VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK-------KGKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 349 vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~-------~~~~gl~~~~~~gG~~~a~ll 401 (404)
+|+.+++..+||+.+++++..+.+++++++.+ ++++.+...++.||.+.++||
T Consensus 195 ~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 195 PAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 47899999999999999999999999999987 788999999999999988875
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=257.76 Aligned_cols=270 Identities=23% Similarity=0.298 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCC--------------------------CCCcHHHHHHHHCCC
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~--------------------------~~~~~a~~i~~~lGl 86 (404)
..+|+.+++++||+++|++++++|. +++|+..+.. .....+.+++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4679999999999999999999987 5555432210 001245678889998
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccc
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (404)
++|+++++++|+|++.||..|+.+|++|++|++||+|+|.+.. |....
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~~~----------------------------- 198 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAIT-PLGIA----------------------------- 198 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCC-HHHHH-----------------------------
Confidence 5899999999999999999999999999999999999998665 32110
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
+..+.+++.+++.+ | ...++| |+.+
T Consensus 199 --~~~~~~~ls~~~~~-----------------------------~----~~~~~p---fd~~----------------- 223 (407)
T TIGR03150 199 --GFAAMKALSTRNDD-----------------------------P----EKASRP---FDKD----------------- 223 (407)
T ss_pred --HHHHhCcccCCCCC-----------------------------C----CcCCCC---CcCC-----------------
Confidence 00000000000000 0 123344 5544
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----CccccchHHHHHHHHHHcCCCCCC
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~d 321 (404)
++|++ ++|||+++||++++.|++++.+++++|.|++...+.. ........++++++|+++|++++|
T Consensus 224 --~~g~~-------~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~d 294 (407)
T TIGR03150 224 --RDGFV-------MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPED 294 (407)
T ss_pred --CCcEE-------EeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhH
Confidence 56776 7999999999999999999999999999999886532 222334678999999999999999
Q ss_pred cceEeecccch----HHHH-HHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc----------------
Q 015576 322 IDYYEINEAFS----VVAI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (404)
Q Consensus 322 Id~~~~hd~~~----~~~~-~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~---------------- 380 (404)
||+++.|+.++ ..+. .+.+.++-...++++++.|..+||+.+|+|+.++++++++|+++
T Consensus 295 Id~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~ 374 (407)
T TIGR03150 295 VDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECD 374 (407)
T ss_pred CCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 99999999999 3333 34455676555788888888999999999999999999999983
Q ss_pred -------C----CceeEEeeeccccceeeeEEE
Q 015576 381 -------K----GKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 381 -------~----~~~gl~~~~~~gG~~~a~ll~ 402 (404)
. .++++++.++.||.++++||+
T Consensus 375 ~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 375 LDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred ccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 1 246788889999999998874
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=255.10 Aligned_cols=271 Identities=21% Similarity=0.280 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcc-C----eEEEEeccCCCC--------------------------CCcHHHHHHHHCC
Q 015576 37 ATKLGSIAIECALKRANVKPLLV-Q----EVFFGNVLSANL--------------------------GQAPARQAALGAG 85 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~i-d----~li~g~~~~~~~--------------------------~~~~a~~i~~~lG 85 (404)
...|+..++++||+++|++++++ + ++++|+..+... ....+.+++..+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 44688999999999999988776 4 466666432110 0124567889999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
+ ++|+++++++|+|++.||..|+.+|++|++|++||+|+|.+.+ |.....
T Consensus 162 l--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~~~~--------------------------- 211 (424)
T PRK06333 162 F--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID-RVSLAG--------------------------- 211 (424)
T ss_pred C--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHH---------------------------
Confidence 9 5899999999999999999999999999999999999998654 221100
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
+. .++.+..+|+.+ ++..++| |+++
T Consensus 212 --f~-~~~~l~~~~~~~---------------------------------p~~~~~P---fd~~---------------- 236 (424)
T PRK06333 212 --FA-AARALSTRFNDA---------------------------------PEQASRP---FDRD---------------- 236 (424)
T ss_pred --HH-HcccccccCCCC---------------------------------CCcCCCC---CCCC----------------
Confidence 00 000000001100 1345566 7766
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC-----ccccchHHHHHHHHHHcCCCCC
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEAS 320 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~ 320 (404)
++|++ ++|||+++||++.+.|++++.+++++|.|++...+... .......++++++|+++|++++
T Consensus 237 ---~~G~~-------~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~ 306 (424)
T PRK06333 237 ---RDGFV-------MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPE 306 (424)
T ss_pred ---CCCeE-------EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHH
Confidence 78888 79999999999999999999999999999999876422 2233557999999999999999
Q ss_pred CcceEeecccchH----HHHHH-HHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc---------------
Q 015576 321 QIDYYEINEAFSV----VAIAN-QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------- 380 (404)
Q Consensus 321 dId~~~~hd~~~~----~~~~~-~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~--------------- 380 (404)
|||+++.|+.++. .+... .+.+| ...+++++++|..+||+.+|+|+.+++.++++|+++
T Consensus 307 dId~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~ 385 (424)
T PRK06333 307 EVQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAA 385 (424)
T ss_pred HCCEEeccCCCCccchHHHHHHHHHHhC-CCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCc
Confidence 9999999999987 34333 34566 335789999999999999999999999999999983
Q ss_pred -------------CCceeEEeeeccccceeeeEEEe
Q 015576 381 -------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 381 -------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..++++++.++.||.++++||++
T Consensus 386 ~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~ 421 (424)
T PRK06333 386 EGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR 421 (424)
T ss_pred cccccccCCCcccCcCEEEEeeecCCCeeEEEEEec
Confidence 12456788899999999999985
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=253.20 Aligned_cols=271 Identities=24% Similarity=0.330 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCC--------------------------CCCcHHHHHHHHCCC
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~--------------------------~~~~~a~~i~~~lGl 86 (404)
..+|+.+++++||+|||++++++|. +++|+..+.. .....+.+++..+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 4578999999999999999988884 6666532210 011245678999998
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccc
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (404)
++|+++++.+|+|++.+|..|+.+|++|++|++||+|+|.+.. |....
T Consensus 152 --~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~~~~----------------------------- 199 (411)
T PRK07314 152 --KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAIT-PLGIA----------------------------- 199 (411)
T ss_pred --CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCC-HHHHH-----------------------------
Confidence 5899999999999999999999999999999999999997665 32110
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
+..+.+++..+ ...| ...++| |+.+
T Consensus 200 --~~~~~~~ls~~-----------------------------~~~p----~~~~~p---fd~~----------------- 224 (411)
T PRK07314 200 --GFAAARALSTR-----------------------------NDDP----ERASRP---FDKD----------------- 224 (411)
T ss_pred --HHHHhccccCC-----------------------------CCCC----CcCcCC---CcCC-----------------
Confidence 00000000000 0001 123344 5444
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC-----CCccccchHHHHHHHHHHcCCCCCC
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQ 321 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~d 321 (404)
++|++ ++|||+++||++++.|++++.+++++|.|++...+. +.........+++++|+++|++++|
T Consensus 225 --~dG~~-------~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~d 295 (411)
T PRK07314 225 --RDGFV-------MGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPED 295 (411)
T ss_pred --CCCEe-------EEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHH
Confidence 56666 799999999999999999999999999999988653 2223334678999999999999999
Q ss_pred cceEeecccch-HHHHHH----HHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC---------------
Q 015576 322 IDYYEINEAFS-VVAIAN----QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------------- 381 (404)
Q Consensus 322 Id~~~~hd~~~-~~~~~~----~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--------------- 381 (404)
||+++.|..++ ..+... .+.++....++++++.|..+||+.+++|+..++..+++|+++.
T Consensus 296 Id~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~ 375 (411)
T PRK07314 296 IDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECD 375 (411)
T ss_pred CCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCC
Confidence 99999999888 333333 3345544467888999999999999999999999999999861
Q ss_pred ------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+++.++.||.++++|||+
T Consensus 376 ~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 376 LDYVPNEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred ccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence 1456788899999999999986
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=248.63 Aligned_cols=276 Identities=22% Similarity=0.286 Sum_probs=210.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCC-CCccCeEEEEeccCCCCCC------------------------------cHHHHHHH
Q 015576 34 SVSATKLGSIAIECALKRANVK-PLLVQEVFFGNVLSANLGQ------------------------------APARQAAL 82 (404)
Q Consensus 34 ~~~~~~l~~~A~~~AL~~agi~-~~~id~li~g~~~~~~~~~------------------------------~~a~~i~~ 82 (404)
+.+..+|+..|+++||+++|++ +++++...+|...+...+. ..+.+++.
T Consensus 74 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 153 (421)
T PTZ00050 74 ESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAI 153 (421)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHH
Confidence 3467899999999999999998 7777765555444322111 14567888
Q ss_pred HCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccc
Q 015576 83 GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (404)
Q Consensus 83 ~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (404)
.+|+ ++|+++++++|+|++.||..|+.+|++|++|++||+|+|.+.. |.....
T Consensus 154 ~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-p~~~~~------------------------ 206 (421)
T PTZ00050 154 KHKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASIT-PVSFAG------------------------ 206 (421)
T ss_pred HhCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCC-HHHHHH------------------------
Confidence 8999 5899999999999999999999999999999999999998554 422110
Q ss_pred cccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhc
Q 015576 163 YNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (404)
Q Consensus 163 ~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~ 242 (404)
|. +.+ .+... ...-++..++| |+++
T Consensus 207 -----f~--------~~~------------------------~l~~~--~~~~p~~~~~p---fd~~------------- 231 (421)
T PTZ00050 207 -----FS--------RMR------------------------ALCTK--YNDDPQRASRP---FDKD------------- 231 (421)
T ss_pred -----HH--------hhh------------------------ccccC--cCCCCCccCCC---CcCC-------------
Confidence 00 000 00000 00001334556 6666
Q ss_pred CCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC-----CCccccchHHHHHHHHHH-cC
Q 015576 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIAN-AG 316 (404)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~-ag 316 (404)
++|++ ++|||+++||++++.|++++.+++++|.|++...+. |........++++++|++ +|
T Consensus 232 ------~~G~~-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Ag 298 (421)
T PTZ00050 232 ------RAGFV-------MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGAN 298 (421)
T ss_pred ------CCCEe-------eccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccC
Confidence 78887 699999999999999999999999999999998763 223334568899999999 99
Q ss_pred CCCCCcceEeecccchHH-----HHHHHHHhCCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC---------
Q 015576 317 LEASQIDYYEINEAFSVV-----AIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------- 381 (404)
Q Consensus 317 l~~~dId~~~~hd~~~~~-----~~~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--------- 381 (404)
++++|||++++|.+++.. ...+.+.+|-.. +++++++.|..+||+.+|+|+..++.++..|+++.
T Consensus 299 i~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~ 378 (421)
T PTZ00050 299 ININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLEN 378 (421)
T ss_pred CChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCC
Confidence 999999999999999832 234455566433 57888999999999999999999999999999751
Q ss_pred --------------------CceeEEeeeccccceeeeEEEeC
Q 015576 382 --------------------GKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 382 --------------------~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
.++.+...++.||.+.++||++.
T Consensus 379 ~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 379 PDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred CCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeCC
Confidence 14567888999999999999863
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=246.36 Aligned_cols=274 Identities=22% Similarity=0.214 Sum_probs=213.7
Q ss_pred ceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC----CCccCeEEEEeccCCCC-----------------
Q 015576 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVK----PLLVQEVFFGNVLSANL----------------- 72 (404)
Q Consensus 14 ~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~----~~~id~li~g~~~~~~~----------------- 72 (404)
+++|+|++++ ..+|+.+|+++||+++|++ +++||.+++++..+...
T Consensus 1 ~~~i~g~g~~-------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (332)
T cd00825 1 RAVITGLGSY-------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVV 67 (332)
T ss_pred CceEEcccHH-------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchh
Confidence 4789999998 6789999999999999999 89999999999866543
Q ss_pred ----CCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCc
Q 015576 73 ----GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD 148 (404)
Q Consensus 73 ----~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~ 148 (404)
.+..+.+++..+|+ ++|+++++.+|+|++.+|+.|..+|++|+++++||+++|..+. +.....
T Consensus 68 ~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~-~~~~~~---------- 134 (332)
T cd00825 68 TKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAA-PMDCEF---------- 134 (332)
T ss_pred hcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHHHHH----------
Confidence 34467889999999 5899999999999999999999999999999999999998765 211100
Q ss_pred cccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeecc
Q 015576 149 TIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDK 228 (404)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~ 228 (404)
. ... ...-++..++| |+.
T Consensus 135 --------------------~-------~~~--------------------------------~~~~~~~~~~~---~~~ 152 (332)
T cd00825 135 --------------------D-------AMG--------------------------------ALSTPEKASRT---FDA 152 (332)
T ss_pred --------------------H-------hhc--------------------------------cccCCCCCCCC---CCC
Confidence 0 000 00000111222 221
Q ss_pred CCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc-----ccc
Q 015576 229 DEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTA 303 (404)
Q Consensus 229 d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~ 303 (404)
. . ++..++||++|+||++++.+++++.++++.+.+.+...+..... ...
T Consensus 153 ~-------------------~-------~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 206 (332)
T cd00825 153 A-------------------A-------DGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEG 206 (332)
T ss_pred C-------------------C-------CCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHH
Confidence 1 2 33448999999999999999988888899999998876533221 234
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCC---CcCCCCCccccCCcccchHHHHHHHHHHHHHhc
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE---QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~---~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
..++++++|+++|++++|||++++|+.+........+.++.... +++....+..+||+.+++++..++++++.++.+
T Consensus 207 ~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~ 286 (332)
T cd00825 207 LARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHG 286 (332)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999998665444444443322 356667788999999999999999999999988
Q ss_pred -------------------------CCceeEEeeeccccceeeeEE
Q 015576 381 -------------------------KGKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 381 -------------------------~~~~gl~~~~~~gG~~~a~ll 401 (404)
.+++.+...++.||...++||
T Consensus 287 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 287 FIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred ccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 778899999999999988875
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=237.44 Aligned_cols=271 Identities=19% Similarity=0.242 Sum_probs=207.9
Q ss_pred CHHHHHHHHHHHHHHHcCCC--CCccCeEEEEeccCCC------------CC-----C---------cHHHHHHHHCCCC
Q 015576 36 SATKLGSIAIECALKRANVK--PLLVQEVFFGNVLSAN------------LG-----Q---------APARQAALGAGIP 87 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~--~~~id~li~g~~~~~~------------~~-----~---------~~a~~i~~~lGl~ 87 (404)
+..+++..|+++|++++|+. ++.+ ++++|+..+.. .+ + ..+.+++..+|+
T Consensus 3 ~~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l- 80 (342)
T PRK14691 3 RWWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF- 80 (342)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC-
Confidence 35678999999999999974 3443 57777754331 01 0 256788999999
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccccc
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (404)
++|+++++++|+|++.||..|+.+|+.|++|++||+|+|.... |..... | ..
T Consensus 81 -~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~-~~~~~~--------------------f------~~ 132 (342)
T PRK14691 81 -KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVID-TVSLAG--------------------F------AA 132 (342)
T ss_pred -CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHHHH--------------------H------HH
Confidence 6899999999999999999999999999999999999998654 221100 0 00
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCc
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~ 247 (404)
++ +.. . . +. .-++..++| ||++
T Consensus 133 ~~---------------------------~ls--~-~-~~------~~p~~~~rP---Fd~~------------------ 154 (342)
T PRK14691 133 AR---------------------------ALS--T-H-FN------STPEKASRP---FDTA------------------ 154 (342)
T ss_pred hh---------------------------hhh--c-C-CC------CCCCcCCCC---CCCC------------------
Confidence 00 000 0 0 00 002456777 8887
Q ss_pred CCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----CccccchHHHHHHHHHHcCCCCCCc
Q 015576 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~dI 322 (404)
++|++ ++|||+++||++++.+++++.+++++|.|++...+.. ......+.++++++|+++|++++||
T Consensus 155 -r~G~v-------~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dI 226 (342)
T PRK14691 155 -RDGFV-------MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQV 226 (342)
T ss_pred -CCCcc-------ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence 89999 7999999999999999999999999999999988753 3334566889999999999999999
Q ss_pred ceEeecccchHH----H-HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----------------
Q 015576 323 DYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (404)
Q Consensus 323 d~~~~hd~~~~~----~-~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------------- 381 (404)
|+++.|++++.. + ..+.+.||-. .+++++.-|..+||+.+++|+..++..+..|+++-
T Consensus 227 dyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~ 305 (342)
T PRK14691 227 QHLNAHATSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKG 305 (342)
T ss_pred CEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccc
Confidence 999999999964 2 2334455642 45788889999999999999999999888888641
Q ss_pred ------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.|...++.||.+.++||++
T Consensus 306 ~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 306 LNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred cCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 1356788899999999999986
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=237.77 Aligned_cols=266 Identities=21% Similarity=0.188 Sum_probs=210.5
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++-+|.. +|++..|+...+++...+|+.+|+++||++||++|+|||.||+.+.+|+..-|..|..++..||+. ++++
T Consensus 30 sdewI~~--rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~a 106 (323)
T COG0332 30 SDEWIET--RTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPA 106 (323)
T ss_pred Ccceeee--ecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccce
Confidence 3566665 788877776677899999999999999999999999999999999999998899999999999998 5899
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (404)
++++.+|+++++||..|..+|++|.++++||+|.|.+|..
T Consensus 107 fDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~---------------------------------------- 146 (323)
T COG0332 107 FDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRI---------------------------------------- 146 (323)
T ss_pred eechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhcc----------------------------------------
Confidence 9999999999999999999999999999999999999862
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCc
Q 015576 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGS 252 (404)
Q Consensus 173 ~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~ 252 (404)
+|.+
T Consensus 147 -----------------------------------------------------ld~~----------------------- 150 (323)
T COG0332 147 -----------------------------------------------------LDWT----------------------- 150 (323)
T ss_pred -----------------------------------------------------CCHh-----------------------
Confidence 1100
Q ss_pred cccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEecc-----------CC-----Cccc-----------cchH
Q 015576 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ-----------AP-----EWFT-----------TAPS 305 (404)
Q Consensus 253 ~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~-----------~~-----~~~~-----------~~~~ 305 (404)
.+..|.++||||+|+||...+ .+.+... ..+...+...+ ++ ..+. ....
T Consensus 151 -dR~t~vlFgDGAgAvvl~~~~--~~~~i~~-~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~ 226 (323)
T COG0332 151 -DRDTCVLFGDGAGAVVLEATE--DDNGILD-TDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMP 226 (323)
T ss_pred -hccceEEEcCCceEEEEecCC--CCcCeee-eeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHH
Confidence 011344489999999998775 1111100 01111111100 00 0000 0125
Q ss_pred HHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCcee
Q 015576 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (404)
Q Consensus 306 ~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~g 385 (404)
.+++++|+++|++++|||++..||++..+...+.+.||++++++..+ .--+||+..||-...|.++++.-+-++|++.
T Consensus 227 ~~~~~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~--~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~i 304 (323)
T COG0332 227 KAIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVT--VDKYGNTSAASIPLALDEALREGRIKPGDLV 304 (323)
T ss_pred HHHHHHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhH--HHHhcccccchHHHHHHHHhhhCCCCCCCEE
Confidence 78999999999999999999999999999999999999988877665 3458999999988899999888888888888
Q ss_pred EEeeeccccceeeeEEEe
Q 015576 386 VGGICNGGGGASALVLEL 403 (404)
Q Consensus 386 l~~~~~~gG~~~a~ll~~ 403 (404)
+...+++|-.+.+++++.
T Consensus 305 ll~~fG~Gltwg~~~~r~ 322 (323)
T COG0332 305 LLEAFGGGLTWGAALVRW 322 (323)
T ss_pred EEEeecCcceeeeEEEEe
Confidence 887777766888888763
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=241.97 Aligned_cols=271 Identities=24% Similarity=0.291 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCCC--------------------------CCcHHHHHHHHCCCC
Q 015576 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------GQAPARQAALGAGIP 87 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~~--------------------------~~~~a~~i~~~lGl~ 87 (404)
..++..++++||+++|+++...+ ++++|+..+... ....+.+++..+|+
T Consensus 75 ~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl- 153 (414)
T PRK08722 75 IQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL- 153 (414)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC-
Confidence 35888999999999999765443 577877543210 01267789999999
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccccc
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (404)
++|+++++++|+|++.||..|+.+|++|++|.+||+|+|.... |.....
T Consensus 154 -~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~~~----------------------------- 202 (414)
T PRK08722 154 -RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAST-PLGMAG----------------------------- 202 (414)
T ss_pred -CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHHHH-----------------------------
Confidence 5899999999999999999999999999999999999998765 321110
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCc
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~ 247 (404)
|. +. +.+... -..++..++| ||.+
T Consensus 203 ---------------------f~---------~~--~~ls~~---~~~p~~~~rp---fd~~------------------ 226 (414)
T PRK08722 203 ---------------------FG---------AA--KALSTR---NDEPQKASRP---WDKD------------------ 226 (414)
T ss_pred ---------------------HH---------Hc--CCcccC---CCCCccccCc---CcCC------------------
Confidence 00 00 000000 0002345677 7777
Q ss_pred CCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----CccccchHHHHHHHHHHcCCCCCCc
Q 015576 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~dI 322 (404)
++|++ ++||++++||++++.|++++.+++++|.|++...+.. +........+++++|+++|++++||
T Consensus 227 -~~G~~-------~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~di 298 (414)
T PRK08722 227 -RDGFV-------LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQI 298 (414)
T ss_pred -CCceE-------eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHc
Confidence 88999 7999999999999999999999999999999987632 2222335789999999999999999
Q ss_pred ceEeecccchHH-----HHHHHHHhCCC-CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC---------------
Q 015576 323 DYYEINEAFSVV-----AIANQKLLGLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------------- 381 (404)
Q Consensus 323 d~~~~hd~~~~~-----~~~~~e~lg~~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--------------- 381 (404)
|+++.|..++.. ...+.+.+|-. .+++.++.-|..+||+.+|+|+..++..+++|+++.
T Consensus 299 d~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~ 378 (414)
T PRK08722 299 GYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLD 378 (414)
T ss_pred CEEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 999999998854 22334456643 346788888999999999999999999999999751
Q ss_pred -------------CceeEEeeeccccceeeeEEEeC
Q 015576 382 -------------GKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 382 -------------~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
.++.+...++.||.+.++||+++
T Consensus 379 ~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~~ 414 (414)
T PRK08722 379 IDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKKM 414 (414)
T ss_pred cccCCCccccCCCCCEEEEecccCCCceEEEEEecC
Confidence 13457788999999999999975
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=238.97 Aligned_cols=273 Identities=23% Similarity=0.280 Sum_probs=201.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCC-----ccCeEEEEeccCCCC--------------------------CCcHHHHHHHHC
Q 015576 36 SATKLGSIAIECALKRANVKPL-----LVQEVFFGNVLSANL--------------------------GQAPARQAALGA 84 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~-----~id~li~g~~~~~~~--------------------------~~~~a~~i~~~l 84 (404)
+..+|+.+|+++||++||+++. +..++++|+..+... ....+.+++..+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 4567999999999999998542 355788887543210 012456899999
Q ss_pred CCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccc
Q 015576 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (404)
Q Consensus 85 Gl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (404)
|+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.... |.....
T Consensus 172 gl--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~~~~-------------------------- 222 (437)
T PLN02836 172 GF--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSID-ALSIAG-------------------------- 222 (437)
T ss_pred CC--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHHHH--------------------------
Confidence 98 5899999999999999999999999999999999999997543 211100
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCC
Q 015576 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (404)
Q Consensus 165 ~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~ 244 (404)
|.. .+.+..+|+.+ | +..++| |+.+
T Consensus 223 ---~~~-~~~l~~~~~~~-----------------------------p----~~~~~p---fd~~--------------- 247 (437)
T PLN02836 223 ---FSR-SRALSTKFNSC-----------------------------P----TEASRP---FDCD--------------- 247 (437)
T ss_pred ---HHH-hhhhhcccCCC-----------------------------c----ccccCC---cccC---------------
Confidence 000 00000000100 1 234555 6655
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc-----cccchHHHHHHHHHHcCCCC
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEA 319 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~ 319 (404)
++|++ ++|||+++||++++.|++++.+++++|.|++..++.... ......++++++|+++|+++
T Consensus 248 ----~~G~~-------~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~ 316 (437)
T PLN02836 248 ----RDGFV-------IGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHP 316 (437)
T ss_pred ----CCCee-------eecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCH
Confidence 77887 799999999999999999999999999999998764322 22334678999999999999
Q ss_pred CCcceEeecccchHH-----HHHHHHHhCCCC--CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-----------
Q 015576 320 SQIDYYEINEAFSVV-----AIANQKLLGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------- 381 (404)
Q Consensus 320 ~dId~~~~hd~~~~~-----~~~~~e~lg~~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~----------- 381 (404)
+|||+++.|+.++.. ...+.+.+|-.. .++.++..|..+||+.+|+|+..++.++.+|+++.
T Consensus 317 ~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~ 396 (437)
T PLN02836 317 NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPD 396 (437)
T ss_pred hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCC
Confidence 999999999999843 222344455321 24566666788899999999999999999999761
Q ss_pred -----------------CceeEEeeeccccceeeeEEEe
Q 015576 382 -----------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 -----------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.|...++.||.+.++||++
T Consensus 397 p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~ 435 (437)
T PLN02836 397 PIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTS 435 (437)
T ss_pred CCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEec
Confidence 1345777899999999999985
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=236.07 Aligned_cols=270 Identities=28% Similarity=0.368 Sum_probs=203.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCC--------------------------CCCcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~--------------------------~~~~~a~~i~~~lG 85 (404)
+..+|+.+|+++||+++|++++++|. +++|+..+.. .....+.+++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 56689999999999999999888775 5555543321 11235778999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
+ ++++++++.+|+|++.||..|+.+|++|++|++||+|+|..+. |.....-
T Consensus 150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~-p~~~~~~-------------------------- 200 (406)
T cd00834 150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALIT-PLTLAGF-------------------------- 200 (406)
T ss_pred C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccC-HHHHHHH--------------------------
Confidence 9 4799999999999999999999999999999999999998775 3221100
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
. . .+.+... . ..++..++| |+.+
T Consensus 201 ---~--------~------------------------~~~l~~~--~-~~p~~~~~p---f~~~---------------- 223 (406)
T cd00834 201 ---A--------A------------------------LRALSTR--N-DDPEKASRP---FDKD---------------- 223 (406)
T ss_pred ---H--------h------------------------cCCcCCC--C-CCCccCCCC---CCCC----------------
Confidence 0 0 0000000 0 001123344 5444
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC-----ccccchHHHHHHHHHHcCCCCC
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEAS 320 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~ 320 (404)
++|++ ++|||+++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++
T Consensus 224 ---~~g~~-------~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~ 293 (406)
T cd00834 224 ---RDGFV-------LGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPE 293 (406)
T ss_pred ---CCCEe-------eeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHH
Confidence 66777 79999999999999999999999999999998865322 2234567899999999999999
Q ss_pred CcceEeecccchHH-H----HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC--------------
Q 015576 321 QIDYYEINEAFSVV-A----IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------- 381 (404)
Q Consensus 321 dId~~~~hd~~~~~-~----~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~-------------- 381 (404)
|||+++.|...+.. . ..+.+.++-..+++++++.|..+||+.+|+|+..++.++++|+++-
T Consensus 294 dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~ 373 (406)
T cd00834 294 DIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPEC 373 (406)
T ss_pred HCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCC
Confidence 99999999888743 2 2233344544457888899999999999999999999999999761
Q ss_pred -------------CceeEEeeeccccceeeeEE
Q 015576 382 -------------GKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 382 -------------~~~gl~~~~~~gG~~~a~ll 401 (404)
.++.+++.++.||.++++||
T Consensus 374 ~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 374 DLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 14667888999999999885
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-27 Score=237.75 Aligned_cols=269 Identities=19% Similarity=0.244 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHcCCCCC---ccC----eEEEEeccCCCC----------------C---------CcHHHHHHHHCC
Q 015576 38 TKLGSIAIECALKRANVKPL---LVQ----EVFFGNVLSANL----------------G---------QAPARQAALGAG 85 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~~---~id----~li~g~~~~~~~----------------~---------~~~a~~i~~~lG 85 (404)
..++..++++||+++|++++ +++ ++++|+..+... . ...+.+++..+|
T Consensus 200 ~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~g 279 (540)
T PLN02787 200 MLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLG 279 (540)
T ss_pred HHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhC
Confidence 35788899999999999754 222 578887643210 0 113567888999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
+ .+|+++++++|+|++.||..|+++|++|++|++||+|+|.... |..... |
T Consensus 280 l--~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~-p~~~~~--------------------f------ 330 (540)
T PLN02787 280 W--MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII-PIGLGG--------------------F------ 330 (540)
T ss_pred C--CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHHHHH--------------------H------
Confidence 9 5899999999999999999999999999999999999997544 321110 0
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
..++.++ .+ . .-++..++| ||++
T Consensus 331 ~~~~aLS----------------------------~~------~----~~p~~~~rP---FD~~---------------- 353 (540)
T PLN02787 331 VACRALS----------------------------QR------N----DDPTKASRP---WDMN---------------- 353 (540)
T ss_pred HHHHHhh----------------------------cc------C----CCcccccCC---cccC----------------
Confidence 0000000 00 0 001345677 8877
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc-----cccchHHHHHHHHHHcCCCCC
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEAS 320 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~ 320 (404)
++|++ +||||+++||++.+.|++++.+++++|.|++...|.... ...+...+++++|+++|++++
T Consensus 354 ---rdGfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~ 423 (540)
T PLN02787 354 ---RDGFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKE 423 (540)
T ss_pred ---CCCcc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHH
Confidence 89999 799999999999999999999999999999998764322 223457899999999999999
Q ss_pred CcceEeecccchHH----H-HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC--------------
Q 015576 321 QIDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------- 381 (404)
Q Consensus 321 dId~~~~hd~~~~~----~-~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~-------------- 381 (404)
|||||+.|...+.. + ..+.+.||-. +++.++..|..+||+.||+|+..++.++..|+++-
T Consensus 424 dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~-~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~ 502 (540)
T PLN02787 424 DVNYINAHATSTKAGDLKEYQALMRCFGQN-PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGV 502 (540)
T ss_pred HCcEEEccCccCCCCCHHHHHHHHHHhCCC-CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccC
Confidence 99999999877643 2 2334456632 35677888999999999999999999999998641
Q ss_pred --------------CceeEEeeeccccceeeeEEEe
Q 015576 382 --------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 --------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.|...+++||.++++||++
T Consensus 503 ~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 503 DTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred CcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 1345788899999999999986
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=238.54 Aligned_cols=266 Identities=25% Similarity=0.318 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCCC-------------------CCcHHHHHHHHCCCCCCccee
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL-------------------GQAPARQAALGAGIPNSVVCT 93 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~~-------------------~~~~a~~i~~~lGl~~~~~~~ 93 (404)
...|+.+|+++||+|||++++++| .+++|+..+++. ....+.+++..+|+ ++|++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl--~g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL--RGPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC--CCCcc
Confidence 455999999999999999999998 788887644321 22356689999999 47999
Q ss_pred eEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHH
Q 015576 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (404)
Q Consensus 94 ~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (404)
+++.+|+|++.||..|+.+|++|++|++||+|+|.... +.....
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~~~~~----------------------------------- 208 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILS-PDTFVG----------------------------------- 208 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCC-HHHHHH-----------------------------------
Confidence 99999999999999999999999999999999998654 211100
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCcc
Q 015576 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253 (404)
Q Consensus 174 ~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~ 253 (404)
+. ..+.+. +...++| |+.+ .+|++
T Consensus 209 ---------------~~-----------~~~~l~--------~~~~~~p---f~~~-------------------~~g~~ 232 (424)
T smart00825 209 ---------------FS-----------RAGMLS--------PDGRCKT---FDAD-------------------ADGYV 232 (424)
T ss_pred ---------------Hh-----------hcCCCC--------CCCCCCC---CCCC-------------------CCccc
Confidence 00 000000 1122344 4444 56776
Q ss_pred ccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc-----cccchHHHHHHHHHHcCCCCCCcceEeec
Q 015576 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (404)
Q Consensus 254 ~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~dId~~~~h 328 (404)
++|||+++||++++.+++++.+++++|.|++...+.... .......+++++|+++|++++|||+++.|
T Consensus 233 -------~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h 305 (424)
T smart00825 233 -------RGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAH 305 (424)
T ss_pred -------ccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEee
Confidence 799999999999999999999999999999988764321 12234689999999999999999999999
Q ss_pred ccchHH-----HHHHHHHhCCCC---CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-------------------
Q 015576 329 EAFSVV-----AIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------------- 381 (404)
Q Consensus 329 d~~~~~-----~~~~~e~lg~~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~------------------- 381 (404)
..++.. ...+.+.+|... .++.+++-|..+||+.+++|+.++++++.+|+++-
T Consensus 306 ~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~ 385 (424)
T smart00825 306 GTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEES 385 (424)
T ss_pred CCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccC
Confidence 777653 123334555432 35667777888899999999999999999999751
Q ss_pred ----------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ----------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ----------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+.+.++.||.+.+++|+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~ 423 (424)
T smart00825 386 PLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEE 423 (424)
T ss_pred ceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEec
Confidence 1345777788899999999985
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=231.37 Aligned_cols=270 Identities=24% Similarity=0.275 Sum_probs=204.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCc-cCe----EEEEeccCCC----------------------CC--CcHHHHHHHHCCC
Q 015576 36 SATKLGSIAIECALKRANVKPLL-VQE----VFFGNVLSAN----------------------LG--QAPARQAALGAGI 86 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~-id~----li~g~~~~~~----------------------~~--~~~a~~i~~~lGl 86 (404)
+...|+.+|+++||+|+|+++++ ++. +++|+..+.. .. ...+.+++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 56789999999999999998876 553 5555542210 11 3467789999999
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccc
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (404)
. ++|+++++++|+|++.||..|+++|++|++|++||+|+|.++ |.....
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~~~~---------------------------- 199 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEGLSG---------------------------- 199 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHHHHH----------------------------
Confidence 4 479999999999999999999999999999999999999877 322210
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
|.. . +.+..+ ..-+...++| |+++
T Consensus 200 -f~~--------~------------------------~~ls~~---~~~~~~~~~p---fd~~----------------- 223 (407)
T cd00828 200 -FAN--------M------------------------GALSTA---EEEPEEMSRP---FDET----------------- 223 (407)
T ss_pred -HHH--------c------------------------CCCCCC---CCCCCcccCC---CcCC-----------------
Confidence 000 0 000000 0001234455 5555
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc----ccchHHHHHHHHHHcCCCCCCc
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF----TTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~----~~~~~~a~~~al~~agl~~~dI 322 (404)
++|++ ++|||+++||++++.|++++.+++++|.|++...+..... .....++++++|+++|++++||
T Consensus 224 --~~G~~-------~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dI 294 (407)
T cd00828 224 --RDGFV-------EAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDL 294 (407)
T ss_pred --CCcEE-------eecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHc
Confidence 77888 7999999999999999999999999999999987754332 2456889999999999999999
Q ss_pred ceEeecccchHH----HHHH-HHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----------------
Q 015576 323 DYYEINEAFSVV----AIAN-QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (404)
Q Consensus 323 d~~~~hd~~~~~----~~~~-~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------------- 381 (404)
|+++.|..++.. +... .+.++-...++.++.-|..+||+.+++|+..++.+++.|+++-
T Consensus 295 d~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 374 (407)
T cd00828 295 DVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEH 374 (407)
T ss_pred CEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccc
Confidence 999999888843 3322 3344543346778888999999999999999999999999751
Q ss_pred -------------CceeEEeeeccccceeeeEE
Q 015576 382 -------------GKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 382 -------------~~~gl~~~~~~gG~~~a~ll 401 (404)
.++.++..++.||.+.++||
T Consensus 375 ~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 375 LSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred ccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 15667888999999999875
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=197.64 Aligned_cols=122 Identities=49% Similarity=0.805 Sum_probs=110.0
Q ss_pred CceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCc
Q 015576 282 QVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHP 361 (404)
Q Consensus 282 ~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~ 361 (404)
+|+++|.+++....+|..+..++..|++++|+++|++++|||++|+||+|+.+.+...|.||++++|+|++||.+++|||
T Consensus 2 ~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GHP 81 (123)
T PF02803_consen 2 KPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALALGHP 81 (123)
T ss_dssp -ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHHH-BH
T ss_pred CeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhccccccccccCccccccccccc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 362 LGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 362 ~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.|+||+++++++++||+++++++|++++|++||++.|+||||
T Consensus 82 ~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 82 LGASGARLVVELAHQLRRRGGRYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEEEEEEEEE
T ss_pred ccccccchhhhhHHHHHHhchhhhhHHhcccceeeEEEEEEC
Confidence 999999999999999999999999999999999999999997
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=224.34 Aligned_cols=273 Identities=27% Similarity=0.340 Sum_probs=210.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-CCccC---eEEEEeccCCCCC---C------------------------cHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVK-PLLVQ---EVFFGNVLSANLG---Q------------------------APARQAALG 83 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~-~~~id---~li~g~~~~~~~~---~------------------------~~a~~i~~~ 83 (404)
.+...|+..|+.+|++|+|++ ....+ .+++|+..+.... . ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 467889999999999999997 33343 3455554433210 0 156788999
Q ss_pred CCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccc
Q 015576 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (404)
Q Consensus 84 lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (404)
+|+ .++.+++.++|+|+.+++..|.++|+.|++|++||+|+|..-. +..+.. |
T Consensus 149 ~g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~-~~~i~g--------------------F---- 201 (412)
T COG0304 149 FGL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAIT-PLGIAG--------------------F---- 201 (412)
T ss_pred hCC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccC-HHHHHH--------------------H----
Confidence 999 5899999999999999999999999999999999999987443 211110 0
Q ss_pred ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcC
Q 015576 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (404)
Q Consensus 164 ~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~ 243 (404)
..|..++ ..+ . .| .+.++| ||++
T Consensus 202 --~am~Als---------------------------t~n-----d--~p----~~asrP---fd~~-------------- 224 (412)
T COG0304 202 --EAMRALS---------------------------TRN-----D--DP----EKASRP---FDKN-------------- 224 (412)
T ss_pred --HHHHHhc---------------------------cCC-----C--Cc----cccCCC---CCCC--------------
Confidence 0111110 000 0 12 566788 8888
Q ss_pred CCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC-----CCccccchHHHHHHHHHHcCCC
Q 015576 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLE 318 (404)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~ 318 (404)
++|++ +++|++++||++.+.|++++.++|++|.|++...|. |.....+..++++++|+++|++
T Consensus 225 -----RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~ 292 (412)
T COG0304 225 -----RDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLT 292 (412)
T ss_pred -----CCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCC
Confidence 99999 899999999999999999999999999999998873 4445667789999999999999
Q ss_pred CCCcceEeecccchHH----HHHHHH-HhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC------------
Q 015576 319 ASQIDYYEINEAFSVV----AIANQK-LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------ 381 (404)
Q Consensus 319 ~~dId~~~~hd~~~~~----~~~~~e-~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~------------ 381 (404)
++||||+..|...+.. +....+ .||--..++.+++.|..+||+.||+|....+-.++.|+.+-
T Consensus 293 ~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp 372 (412)
T COG0304 293 PEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDP 372 (412)
T ss_pred HhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCc
Confidence 9999999999777632 333333 45655556788999999999999999999999999999540
Q ss_pred ----------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ----------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ----------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+...+++||.+.++++++
T Consensus 373 ~~~~l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~~ 410 (412)
T COG0304 373 EAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKR 410 (412)
T ss_pred ccccccccCCcccccceeEEEecccccCCcceEEEEec
Confidence 2345788889999999999986
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=226.42 Aligned_cols=261 Identities=27% Similarity=0.322 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCc-cCeEEEEeccCCC-----------------------------CCCcHHHHHHHHCCCC
Q 015576 38 TKLGSIAIECALKRANVKPLL-VQEVFFGNVLSAN-----------------------------LGQAPARQAALGAGIP 87 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~~~-id~li~g~~~~~~-----------------------------~~~~~a~~i~~~lGl~ 87 (404)
..++..|+++||+|+|+++.. --++++|+..+.. .....+.+++..+|+
T Consensus 57 ~~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~- 135 (381)
T PRK05952 57 EDLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT- 135 (381)
T ss_pred cHHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC-
Confidence 346778999999999996421 1257787743310 001246788899999
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccccc
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (404)
++|++++.++|+|++.||..|+.+|++|++|.+||+|+|.... |.....
T Consensus 136 -~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~~~----------------------------- 184 (381)
T PRK05952 136 -QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-PLTLAG----------------------------- 184 (381)
T ss_pred -CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHHHH-----------------------------
Confidence 5899999999999999999999999999999999999997433 221100
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCc
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~ 247 (404)
+. .-+.+ ....++| ||++
T Consensus 185 ---------------------~~-----------~~~~l---------s~~~~rP---fd~~------------------ 202 (381)
T PRK05952 185 ---------------------FQ-----------QMGAL---------AKTGAYP---FDRQ------------------ 202 (381)
T ss_pred ---------------------HH-----------hcCCc---------CCCCCCC---CCCC------------------
Confidence 00 00000 1123566 7777
Q ss_pred CCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----CccccchHHHHHHHHHHcCCCCCCc
Q 015576 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~dI 322 (404)
++|++ ++||++++||++++.|++++.+++++|.|++...+.. ........++++++|+++|++++||
T Consensus 203 -r~G~v-------~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dI 274 (381)
T PRK05952 203 -REGLV-------LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDI 274 (381)
T ss_pred -CCCcc-------ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHe
Confidence 88998 7999999999999999999999999999999987632 2233356789999999999999999
Q ss_pred ceEeecccchHH----HHH-HHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----------------
Q 015576 323 DYYEINEAFSVV----AIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (404)
Q Consensus 323 d~~~~hd~~~~~----~~~-~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------------- 381 (404)
|+++.|...+.. +.. +.+.+| +++++++.|..+||+.+|+|+..++.+++.|+++-
T Consensus 275 d~i~~hgtgt~~~D~~E~~al~~~fg---~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~ 351 (381)
T PRK05952 275 DYIHAHGTATRLNDQREANLIQALFP---HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNF 351 (381)
T ss_pred eEEEccCCCCCCCcHHHHHHHHHHcC---CCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence 999999777643 222 223344 46889999999999999999999999999999751
Q ss_pred --------CceeEEeeeccccceeeeEEEe
Q 015576 382 --------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 --------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+...++.||.+.++||++
T Consensus 352 v~~~~~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 352 VRQAQQSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred CCCcccCCCCEEEEeeecCCCeeEEEEEeC
Confidence 2456788899999999999975
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=226.29 Aligned_cols=269 Identities=24% Similarity=0.285 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHHcCCCC---CccCeEEEEeccCCCC------------C--------------CcHHHHHHHHCCCCC
Q 015576 38 TKLGSIAIECALKRANVKP---LLVQEVFFGNVLSANL------------G--------------QAPARQAALGAGIPN 88 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~---~~id~li~g~~~~~~~------------~--------------~~~a~~i~~~lGl~~ 88 (404)
..++..++++||++||++. +.+ ++++|+..+... + ...+.+++..+|+
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~-- 160 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRL-MVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA-- 160 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccE-EEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC--
Confidence 4478889999999999742 222 466776543210 0 0145678888888
Q ss_pred CcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccH
Q 015576 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (404)
Q Consensus 89 ~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (404)
.+|+++++++|+|++.||..|+++|++|++|.+||+|+|.... |.....
T Consensus 161 ~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~-~~~~~~------------------------------ 209 (418)
T PRK07910 161 KAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIE-AVPIAG------------------------------ 209 (418)
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHHHH------------------------------
Confidence 5899999999999999999999999999999999999998654 321110
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcC
Q 015576 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (404)
Q Consensus 169 ~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~ 248 (404)
+.+.|. .+.. ...-++..++| ||++
T Consensus 210 -------f~~~~~-----------------------~ls~---~~~~~~~~~rP---Fd~~------------------- 234 (418)
T PRK07910 210 -------FAQMRI-----------------------VMST---NNDDPAGACRP---FDKD------------------- 234 (418)
T ss_pred -------HHhcCC-----------------------cccc---CCCCCCCCcCC---CcCC-------------------
Confidence 000000 0000 00002455677 7777
Q ss_pred CCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC-----ccccchHHHHHHHHHHcCCCCCCcc
Q 015576 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~dId 323 (404)
++|++ ++||++++||++++.+++++.+++++|.|++..++... .......++++++|+++|++++|||
T Consensus 235 ~~G~v-------~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did 307 (418)
T PRK07910 235 RDGFV-------FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDID 307 (418)
T ss_pred CCCEe-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCC
Confidence 88999 79999999999999999999999999999999886432 2233457899999999999999999
Q ss_pred eEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-----------------
Q 015576 324 YYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------------- 381 (404)
Q Consensus 324 ~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~----------------- 381 (404)
+++.|...+.. ...+.+.||-. ..++++.|..+||+.+++|+..++..+.+|+++.
T Consensus 308 ~ie~hgtgt~~~D~~E~~Al~~~fg~~--~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~ 385 (418)
T PRK07910 308 HVNAHATGTSVGDVAEGKAINNALGGH--RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLD 385 (418)
T ss_pred EEEcCCcCCCCCCHHHHHHHHHHhCCC--CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc
Confidence 99999988843 33344456642 2345678999999999999999999999998741
Q ss_pred ----------CceeEEeeeccccceeeeEEEeC
Q 015576 382 ----------GKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 382 ----------~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
.++.++..++.||.++++||++.
T Consensus 386 ~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 386 VVAGEPRPGNYRYAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred cCCCCCcCCCccEEEEeeecCCCeeEEEEEecC
Confidence 14568888999999999999863
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-26 Score=227.20 Aligned_cols=274 Identities=23% Similarity=0.196 Sum_probs=199.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC--eEEEEeccCC----------------CCC---------CcHHHHHHHHCCCCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ--EVFFGNVLSA----------------NLG---------QAPARQAALGAGIPN 88 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id--~li~g~~~~~----------------~~~---------~~~a~~i~~~lGl~~ 88 (404)
+..+|+..|+++||+++|+++.+.+ ++++|+.... ... ...+.+++..+|+
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl-- 156 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI-- 156 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--
Confidence 3567999999999999998632222 3555543210 001 1256678899999
Q ss_pred CcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccH
Q 015576 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (404)
Q Consensus 89 ~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (404)
++|+++++++|+|++.||..|+.+|++|++|.+||+|+|.... |..... | ..+
T Consensus 157 ~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~~~~~~--------------------~------~~~ 209 (410)
T PRK07103 157 RGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-YWECQA--------------------L------RSL 209 (410)
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHHHH--------------------H------HHc
Confidence 5799999999999999999999999999999999999974332 211100 0 000
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcC
Q 015576 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (404)
Q Consensus 169 ~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~ 248 (404)
+.+ ....+. ..+...++| ||++
T Consensus 210 ~~l------------------------------~~~~~~------~~p~~~~rP---fd~~------------------- 231 (410)
T PRK07103 210 GAM------------------------------GSDRFA------DEPEAACRP---FDQD------------------- 231 (410)
T ss_pred ccc------------------------------ccCccC------CCcccCcCC---CCCC-------------------
Confidence 000 000000 001234456 6666
Q ss_pred CCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc---cccchHHHHHHHHHHcCCCCCCcceE
Q 015576 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQIDYY 325 (404)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~agl~~~dId~~ 325 (404)
++|++ +|||++++||++.+.|++++.+++++|.|++...+.... ...+..++++++|+++|++++|||++
T Consensus 232 ~dG~v-------~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v 304 (410)
T PRK07103 232 RDGFI-------YGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYV 304 (410)
T ss_pred CCCee-------EeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 78888 799999999999999999999999999999998764322 22234689999999999999999999
Q ss_pred eecccchHH-HHHHHHHh-CCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----------------------
Q 015576 326 EINEAFSVV-AIANQKLL-GLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------------- 381 (404)
Q Consensus 326 ~~hd~~~~~-~~~~~e~l-g~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------------------- 381 (404)
+.|..++.. .....+.+ +....+++++..|..+||+.+|+|+.+++.++++|+++.
T Consensus 305 ~~hgtgt~~~D~~E~~al~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~ 384 (410)
T PRK07103 305 NPHGTGSPLGDETELAALFASGLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTA 384 (410)
T ss_pred EccCCCCCCCCHHHHHHHhcCCCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCC
Confidence 999999974 34444444 222235666777888899999999999999999999641
Q ss_pred ----CceeEEeeeccccceeeeEEEe
Q 015576 382 ----GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ----~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.++..++.||.+.++||++
T Consensus 385 ~~~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 385 ESARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred cCCCCCEEEEecccCCCceEEEEEeC
Confidence 2456788899999999999985
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=222.90 Aligned_cols=269 Identities=23% Similarity=0.276 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCC--------------------------CCCcHHHHHHHHCCC
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~--------------------------~~~~~a~~i~~~lGl 86 (404)
..+|+..|+++||+|+|+++++++. +++|+..+.. .....+.+++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 5678999999999999999888775 4444322110 011356788999999
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccc
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (404)
++|++++.++|+|++.||..|+.+|++|++|++||+|+|.... |.....
T Consensus 152 --~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~-~~~~~~---------------------------- 200 (406)
T PRK08439 152 --KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAIC-PVGIGG---------------------------- 200 (406)
T ss_pred --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccC-HHHHHH----------------------------
Confidence 5799999999999999999999999999999999999997544 221110
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
+. . .+.+.. .-.-++..++| ||.+
T Consensus 201 ----------------------f~-----~------~~~ls~---~~~~p~~~~rp---fd~~----------------- 224 (406)
T PRK08439 201 ----------------------FA-----A------MKALST---RNDDPKKASRP---FDKD----------------- 224 (406)
T ss_pred ----------------------HH-----H------hCcccc---CCCCCccCcCC---ccCC-----------------
Confidence 00 0 000000 00001345667 7776
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccc---cchHHHHHHHHHHcCCCCCCcc
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT---TAPSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~---~~~~~a~~~al~~agl~~~dId 323 (404)
++|++ ++||++++||++.+.|++++.+++++|.|++...+...... .+..++++++|+++|+ +|||
T Consensus 225 --~~G~v-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~ 293 (406)
T PRK08439 225 --RDGFV-------MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKID 293 (406)
T ss_pred --CCcEE-------eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccC
Confidence 88998 79999999999999999999999999999998765432221 3456899999999998 8999
Q ss_pred eEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-----------------
Q 015576 324 YYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------------- 381 (404)
Q Consensus 324 ~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~----------------- 381 (404)
|++.|...+.. ...+.+.+|-...++.++.-|..+||+.+++|+..++..+..|+++-
T Consensus 294 ~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 373 (406)
T PRK08439 294 YINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLD 373 (406)
T ss_pred EEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcc
Confidence 99999877643 22334455643334456777888999999999999999999999761
Q ss_pred ----------CceeEEeeeccccceeeeEEEe
Q 015576 382 ----------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ----------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+...++.||.+.++||++
T Consensus 374 ~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 374 YIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred cCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 1346788899999999999986
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=221.16 Aligned_cols=266 Identities=20% Similarity=0.302 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CccC----eEEEEeccCCC-----------------CC--------C-cHHHHHHHHCC
Q 015576 37 ATKLGSIAIECALKRANVKP-LLVQ----EVFFGNVLSAN-----------------LG--------Q-APARQAALGAG 85 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~-~~id----~li~g~~~~~~-----------------~~--------~-~~a~~i~~~lG 85 (404)
...|+..|+++||++||++. ..++ ++++|+..+.. .. + ..+.+++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 35688999999999999842 2222 57777644321 00 1 15678899999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
+ ++|+++++++|+|++.||..|+.+|++|++|++||+|+|..+. +....
T Consensus 153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~~---------------------------- 201 (405)
T PRK09116 153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCP-TEAAV---------------------------- 201 (405)
T ss_pred C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcCh-HHHHH----------------------------
Confidence 9 5899999999999999999999999999999999999997543 11000
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
+.. .++. ... . ..+...++| ||++
T Consensus 202 --f~~------------------------l~~~-~~~----~------~~~~~~~rP---fd~~---------------- 225 (405)
T PRK09116 202 --FDT------------------------LFAT-STR----N------DAPELTPRP---FDAN---------------- 225 (405)
T ss_pred --HHH------------------------hhhh-ccC----C------CCCCCCCCC---CcCC----------------
Confidence 000 0000 000 0 001345567 7777
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc---ccchHHHHHHHHHHcCCCCCCc
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF---TTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~---~~~~~~a~~~al~~agl~~~dI 322 (404)
++|++ +|||++++||++.+.|++++.+++++|.|++...+..... ......+++++|+++|++++||
T Consensus 226 ---~~G~v-------~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dI 295 (405)
T PRK09116 226 ---RDGLV-------IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDI 295 (405)
T ss_pred ---CCCEe-------eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHc
Confidence 89999 7999999999999999999999999999999987653322 2345789999999999999999
Q ss_pred ceEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----------------
Q 015576 323 DYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (404)
Q Consensus 323 d~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------------- 381 (404)
|+++.|...+.. ...+.+.+|- ++.++.-|..+||+.+++|+..++..+..|+++-
T Consensus 296 d~I~~Hgtgt~~~D~~E~~Ai~~~fg~---~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~ 372 (405)
T PRK09116 296 GYVNAHGTATDRGDIAESQATAAVFGA---RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGA 372 (405)
T ss_pred CEEECcCccCCCCCHHHHHHHHHHhCC---CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcc
Confidence 999999877732 3334445662 4567788999999999999999999999988751
Q ss_pred ------------CceeEEeeeccccceeeeEEE
Q 015576 382 ------------GKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 382 ------------~~~gl~~~~~~gG~~~a~ll~ 402 (404)
.++.|...++.||.++++||+
T Consensus 373 l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 373 LDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred cCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 135678889999999999985
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=221.53 Aligned_cols=266 Identities=24% Similarity=0.242 Sum_probs=203.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCCC------------C--------------CcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL------------G--------------QAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~~------------~--------------~~~a~~i~~~lG 85 (404)
+...|+..|+++||+|+|++++.++ ++++|+..+... + ...+.+++..+|
T Consensus 70 ~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (399)
T cd00832 70 RMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHG 149 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhC
Confidence 3567899999999999999876654 467776543210 0 014568889999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
+ ++|+++++++|+|++.||..|+++|++|+ |.+||+|+|.... |.....
T Consensus 150 l--~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~-p~~~~~--------------------------- 198 (399)
T cd00832 150 M--RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALC-PWGWVA--------------------------- 198 (399)
T ss_pred C--CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccC-HHHHHH---------------------------
Confidence 9 58999999999999999999999999999 9999999998655 322210
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
+.+ .+.+. .-..++..++| ||++
T Consensus 199 ----------~~~------------------------~~~ls----~~~~p~~~~rP---Fd~~---------------- 221 (399)
T cd00832 199 ----------QLS------------------------SGRLS----TSDDPARAYLP---FDAA---------------- 221 (399)
T ss_pred ----------HHh------------------------ccccC----CCCCCCCCcCC---CcCC----------------
Confidence 000 00000 00012346677 7777
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc--cccchHHHHHHHHHHcCCCCCCcc
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW--FTTAPSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~--~~~~~~~a~~~al~~agl~~~dId 323 (404)
++|++ ++||++++||++.+.|++++.+++++|.|++...+.... ...+..++++++|+++|++++|||
T Consensus 222 ---~~G~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~ 291 (399)
T cd00832 222 ---AAGYV-------PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVD 291 (399)
T ss_pred ---CCCEe-------eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcc
Confidence 88999 799999999999999999999999999999998764322 234567899999999999999999
Q ss_pred eEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-----------------
Q 015576 324 YYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------------- 381 (404)
Q Consensus 324 ~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~----------------- 381 (404)
|++.|-..+.. ...+.+.||- .+++++..|..+||+.+++|+..++.++.+|+++-
T Consensus 292 ~v~~hgtgt~~~D~~E~~al~~~fg~--~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~ 369 (399)
T cd00832 292 VVFADAAGVPELDRAEAAALAAVFGP--RGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLD 369 (399)
T ss_pred EEEeccCcCCCCCHHHHHHHHHHhCC--CCCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcc
Confidence 99999766642 2333445664 24567788999999999999999999999999751
Q ss_pred ----------CceeEEeeeccccceeeeEE
Q 015576 382 ----------GKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 382 ----------~~~gl~~~~~~gG~~~a~ll 401 (404)
.++.+...++.||.+.++||
T Consensus 370 ~v~~~~~~~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 370 LVTGRPRPAALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred cCCCcccCCCCCEEEEeccCCCCcceEEEC
Confidence 24568888999999999885
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=222.20 Aligned_cols=271 Identities=22% Similarity=0.236 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC------------------eEEEEeccC---------------CC-------CCCcH
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ------------------EVFFGNVLS---------------AN-------LGQAP 76 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id------------------~li~g~~~~---------------~~-------~~~~~ 76 (404)
...|+..++++||+|||+++.+++ .++.+.... .. .-+..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 456889999999999999643322 111211100 00 11235
Q ss_pred HHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccc
Q 015576 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLK 156 (404)
Q Consensus 77 a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~ 156 (404)
+.+++..+|+ ++++++++.+|+|++.||..|+.+|++|++|++||+|+|.... |....
T Consensus 155 a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~-~~~~~------------------- 212 (425)
T PRK06501 155 ADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS-AEALI------------------- 212 (425)
T ss_pred HHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHH-------------------
Confidence 6788999999 5899999999999999999999999999999999999996433 21110
Q ss_pred cccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCC
Q 015576 157 DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD 236 (404)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~ 236 (404)
.+... + .+.. ....+...++| ||.+
T Consensus 213 -------------------------------~~~~~---~--------~ls~---~~~~~~~~~rp---fd~~------- 237 (425)
T PRK06501 213 -------------------------------RFSLL---S--------ALST---QNDPPEKASKP---FSKD------- 237 (425)
T ss_pred -------------------------------HHHHh---h--------cccc---CCCCCCcccCC---CCCC-------
Confidence 00000 0 0000 00012345566 7776
Q ss_pred HHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc-----cccchHHHHHHH
Q 015576 237 AAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKA 311 (404)
Q Consensus 237 ~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~a 311 (404)
++|++ +|||++++||++.+.+++++.++++.|.|++...+.... ......++++++
T Consensus 238 ------------r~G~v-------~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~A 298 (425)
T PRK06501 238 ------------RDGFV-------MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAA 298 (425)
T ss_pred ------------CCCee-------eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHH
Confidence 78888 799999999999999999999999999999987654222 122456899999
Q ss_pred HHHcCCCCCCcceEeecccchHHH-----HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-----
Q 015576 312 IANAGLEASQIDYYEINEAFSVVA-----IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----- 381 (404)
Q Consensus 312 l~~agl~~~dId~~~~hd~~~~~~-----~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~----- 381 (404)
|+++|++++|||+++.|..++... ..+.+.+|-...++.++..|..+||+.+++|+..++..+..|+++.
T Consensus 299 L~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~ 378 (425)
T PRK06501 299 LADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTI 378 (425)
T ss_pred HHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcC
Confidence 999999999999999999987642 1222334432234566666778899999999999999999999751
Q ss_pred ----------------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ----------------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ----------------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+.+.++.||.+.++||++
T Consensus 379 n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~ 422 (425)
T PRK06501 379 NYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTA 422 (425)
T ss_pred CCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEec
Confidence 1234667889999999999985
|
|
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=212.42 Aligned_cols=271 Identities=25% Similarity=0.336 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCC---ccCe----EEEEeccCCCCC-----------------C---------cHHHHHHHH
Q 015576 37 ATKLGSIAIECALKRANVKPL---LVQE----VFFGNVLSANLG-----------------Q---------APARQAALG 83 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~---~id~----li~g~~~~~~~~-----------------~---------~~a~~i~~~ 83 (404)
+..|++.|+++||+++++.+. +.|. +.+|+.++.... | ..+.+++..
T Consensus 94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~ 173 (440)
T KOG1394|consen 94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK 173 (440)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhh
Confidence 456999999999999998654 3443 444443332110 0 156789999
Q ss_pred CCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccc
Q 015576 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (404)
Q Consensus 84 lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (404)
+|+ ++|...++++|+++..++..|.+.|+.|++|+.|++|+|..-. |..... |
T Consensus 174 ~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~-PlslaG--------------------F---- 226 (440)
T KOG1394|consen 174 YGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN-PLSLAG--------------------F---- 226 (440)
T ss_pred hcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec-chhhhh--------------------H----
Confidence 999 6899999999999999999999999999999999999998876 432211 1
Q ss_pred ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcC
Q 015576 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (404)
Q Consensus 164 ~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~ 243 (404)
.+.++...-+. .++..+|| ||++
T Consensus 227 -----------------------------~r~RALSt~nd-----------~P~~aSRP---fD~~-------------- 249 (440)
T KOG1394|consen 227 -----------------------------SRARALSTRND-----------NPQKASRP---FDKK-------------- 249 (440)
T ss_pred -----------------------------HHHHHhhhcCC-----------CccccCCC---CccC--------------
Confidence 01111111010 12456678 8888
Q ss_pred CCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEecc-----CCCccccchHHHHHHHHHHcCCC
Q 015576 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ-----APEWFTTAPSLAIPKAIANAGLE 318 (404)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~ 318 (404)
++|++ +|||++.+||+.-|.|++++.+++++++|++...| .|+..+.+...+++++|++||+.
T Consensus 250 -----RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~ 317 (440)
T KOG1394|consen 250 -----RDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLS 317 (440)
T ss_pred -----CCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCC
Confidence 99999 89999999999999999999999999999999877 46666777889999999999999
Q ss_pred CCCcceEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC------------
Q 015576 319 ASQIDYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------ 381 (404)
Q Consensus 319 ~~dId~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~------------ 381 (404)
|+||||+..|...+.. ..++.+.|+--.....++..|..+||..||+|....+-.+..++.+.
T Consensus 318 pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~ 397 (440)
T KOG1394|consen 318 PEDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDP 397 (440)
T ss_pred hhhcCeeecccccCcCchHHHHHHHHHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCc
Confidence 9999999999887754 22333344433333357888999999999999887777777777541
Q ss_pred -------------------CceeEEeeeccccceeeeEEEe
Q 015576 382 -------------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 -------------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.+..|...+++||.+.++++..
T Consensus 398 ~~d~~~~~~~~~~~~~~~~~~valsNSFGFGGtNaSl~fa~ 438 (440)
T KOG1394|consen 398 GVDLDYVPLKASEKKGGNKVRVALSNSFGFGGTNASLCFAK 438 (440)
T ss_pred cccccccccccccccccccceEEEecccccCCcchhheeee
Confidence 1356788899999999998864
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-24 Score=209.39 Aligned_cols=266 Identities=22% Similarity=0.264 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC-------------C-----C---------CcHHHHHHHHCC
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-------------L-----G---------QAPARQAALGAG 85 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~-------------~-----~---------~~~a~~i~~~lG 85 (404)
...++..|+++||+++|+++++.+ ++++|+..+.. . . ...+.+++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 456889999999999999765443 46666642221 0 0 125678999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
+ ++|+++++++|+|++.||..|+.+|++|++|++||+|+|..+. +.....
T Consensus 151 l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~-~~~~~f--------------------------- 200 (406)
T PRK07967 151 I--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDW-EMSCLF--------------------------- 200 (406)
T ss_pred C--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCh-HHHHHH---------------------------
Confidence 9 5899999999999999999999999999999999999997543 110000
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
..++.+ ..+ +. .-++..++| ||++
T Consensus 201 ~~~~~l----------------------------s~~---~~------~~p~~~~rP---Fd~~---------------- 224 (406)
T PRK07967 201 DAMGAL----------------------------STK---YN------DTPEKASRA---YDAN---------------- 224 (406)
T ss_pred HHhhhh----------------------------ccC---CC------CCCCcCCcC---CcCC----------------
Confidence 000000 000 00 002445677 7777
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc---ccchHHHHHHHHHHcCCCCCCc
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF---TTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~---~~~~~~a~~~al~~agl~~~dI 322 (404)
++|++ ++|||+++||++.+.|++++.+++++|.|++...+..... .....++++++|+.++ + ||
T Consensus 225 ---r~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~I 291 (406)
T PRK07967 225 ---RDGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PI 291 (406)
T ss_pred ---CCcee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-Cc
Confidence 89999 7999999999999999999999999999999987654322 2345788999998644 5 99
Q ss_pred ceEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----------------
Q 015576 323 DYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (404)
Q Consensus 323 d~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------------- 381 (404)
|||+.|-..+.. ...+.+.||- .++.++.-|..+||+.+|+|+..++..+..|+++-
T Consensus 292 dyi~aHgtGT~~~D~~E~~Ai~~~fg~--~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~ 369 (406)
T PRK07967 292 DYINTHGTSTPVGDVKELGAIREVFGD--KSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAG 369 (406)
T ss_pred cEEEcCCCCCCCCCHHHHHHHHHHhCC--CCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccC
Confidence 999999776632 2333445663 33467788999999999999999999999998751
Q ss_pred ------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+...++.||.++++||++
T Consensus 370 ~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~ 403 (406)
T PRK07967 370 MPIVTETTDNAELTTVMSNSFGFGGTNATLVFRR 403 (406)
T ss_pred CCccCCCCcCCCCCEEEEecccCCCeeEEEEEEe
Confidence 1346788899999999999986
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-25 Score=212.10 Aligned_cols=251 Identities=19% Similarity=0.160 Sum_probs=188.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCC-CcceeeEcccCCcHHHHHHHHHHH
Q 015576 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN-SVVCTTINKVCSSGMKAVMLAAQS 112 (404)
Q Consensus 34 ~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~-~~~~~~v~~aCas~~~al~~A~~~ 112 (404)
+++..+|+.+|+++||+++|+++++||.+++++.+++...+..+.+++..||++. .+++++++.+|+|++.||..|..+
T Consensus 49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~ 128 (329)
T PRK07204 49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYA 128 (329)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999988876666778899999999974 368999999999999999999999
Q ss_pred HHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHH
Q 015576 113 IQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (404)
Q Consensus 113 I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~ 192 (404)
|++|.++.+||+++|.++..- .
T Consensus 129 l~~g~~~~~Lvv~~e~~s~~~--~-------------------------------------------------------- 150 (329)
T PRK07204 129 IECGRYKRVLIISSEISSVGL--N-------------------------------------------------------- 150 (329)
T ss_pred HHCCCCCEEEEEEeccccCCC--C--------------------------------------------------------
Confidence 999999999999999876410 0
Q ss_pred HHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecC
Q 015576 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (404)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~ 272 (404)
++.. ..+.+ +||||+|+||++
T Consensus 151 ---------------------------------~~~~-------------------~~~~l-------fGDGAaA~ll~~ 171 (329)
T PRK07204 151 ---------------------------------WGQN-------------------ESCIL-------FGDGAAAVVITK 171 (329)
T ss_pred ---------------------------------cccC-------------------cceEE-------EecccEEEEEEE
Confidence 0000 11233 799999999987
Q ss_pred HHHHHHc-C-------C-CceEEEEeeEEeccCCC-c----------c-cc--------chHHHHHHHHHHcCCCCCCcc
Q 015576 273 GVKALEL-G-------L-QVIAKIRGFADAAQAPE-W----------F-TT--------APSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 273 ~~~a~~~-~-------~-~~~~~i~g~~~~~~~~~-~----------~-~~--------~~~~a~~~al~~agl~~~dId 323 (404)
++...+. . . ..+.++.+.+....... . + .. ...++++++|+++|++++|||
T Consensus 172 ~~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did 251 (329)
T PRK07204 172 GDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADID 251 (329)
T ss_pred cCCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 5421100 0 0 00112222221100000 0 0 00 124789999999999999999
Q ss_pred eEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 324 YYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
++.+|+.+......+.+.||++++++.. -..-+||+.+++-...+.+++++-+.++|++.+...++.|-...++||+.
T Consensus 252 ~~~~H~~~~~~~~~i~~~l~l~~e~~~~--~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 252 LIVPHQASGPAMRLIRKKLGVDEERFVT--IFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred EEEeCCCCHHHHHHHHHHcCCCHHHhhh--hHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 9999999999999999999999887653 35678999888877777777665455677888887777777888888873
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=216.60 Aligned_cols=265 Identities=25% Similarity=0.292 Sum_probs=196.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCC-------------------CCCcHHHHHHHHCCCCCCcce
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN-------------------LGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~-------------------~~~~~a~~i~~~lGl~~~~~~ 92 (404)
+..+|+.+|+++||+|+|+++++++. +++|+..+++ .....+..++..+|+ ++|+
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl--~g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL--RGPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC--CCCc
Confidence 45789999999999999999888775 6666653321 012356789999999 4799
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (404)
++++.+|+|++.||..|+.+|++|.+|++||+|+|.+.. +.....
T Consensus 164 ~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~~~~---------------------------------- 208 (421)
T cd00833 164 LTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILS-PDMFVG---------------------------------- 208 (421)
T ss_pred eeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCC-HHHHHH----------------------------------
Confidence 999999999999999999999999999999999998654 211100
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCc
Q 015576 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGS 252 (404)
Q Consensus 173 ~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~ 252 (404)
+... +.+. +...++| |+.+ ++|+
T Consensus 209 ---~~~~------------------------~~l~--------~~~~~~p---f~~~-------------------~~g~ 231 (421)
T cd00833 209 ---FSKA------------------------GMLS--------PDGRCRP---FDAD-------------------ADGY 231 (421)
T ss_pred ---HhhC------------------------CCCC--------CCCCCCC---CCCC-------------------CCCe
Confidence 0000 0000 0112334 4444 5677
Q ss_pred cccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc-----cccchHHHHHHHHHHcCCCCCCcceEee
Q 015576 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQIDYYEI 327 (404)
Q Consensus 253 ~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~dId~~~~ 327 (404)
+ ++|||+++||++++.+++.+.+++++|.|++...+.... ......++++++|+++|++++|||+++.
T Consensus 232 ~-------~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~ 304 (421)
T cd00833 232 V-------RGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEA 304 (421)
T ss_pred e-------eeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEe
Confidence 7 799999999999999999999999999999987654221 1234578999999999999999999999
Q ss_pred cccchHHH-HH----HHHHhCCC---CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC------------------
Q 015576 328 NEAFSVVA-IA----NQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------------ 381 (404)
Q Consensus 328 hd~~~~~~-~~----~~e~lg~~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~------------------ 381 (404)
|..++... .. +.+.++-. ..++..+.-|..+||+.+++|+..++.++.+|+++.
T Consensus 305 hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~ 384 (421)
T cd00833 305 HGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEE 384 (421)
T ss_pred eCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCccc
Confidence 99887542 22 22333332 235677788999999999999999999999998651
Q ss_pred -----------------CceeEEeeeccccceeeeEE
Q 015576 382 -----------------GKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 382 -----------------~~~gl~~~~~~gG~~~a~ll 401 (404)
.++.+...++.||.+.++||
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 385 SPLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred CCeEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 13446667778888888775
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-24 Score=207.79 Aligned_cols=262 Identities=21% Similarity=0.210 Sum_probs=197.1
Q ss_pred CCCHHHHHHHHHHHHHHHcC-CCCCccCeEEEEecc-----CCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHH
Q 015576 34 SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVL-----SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVM 107 (404)
Q Consensus 34 ~~~~~~l~~~A~~~AL~~ag-i~~~~id~li~g~~~-----~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~ 107 (404)
..+..+|+.+|++++|++++ +++++|+.+++.... +....+..+..++..+|++...++++++.+|+|++.||.
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~ 141 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALA 141 (348)
T ss_pred hHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHH
Confidence 35788999999999999999 789999987764331 111122345678888998655788999999999999999
Q ss_pred HHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHH
Q 015576 108 LAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187 (404)
Q Consensus 108 ~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a 187 (404)
.|+.+|++|++|.+||+|+|.++. +.....
T Consensus 142 ~A~~~i~~G~~~~~lvgg~d~~~~-~~~~~~------------------------------------------------- 171 (348)
T PRK06147 142 QARRLIAAGGCPRVLVAGVDSLLT-GPTLAH------------------------------------------------- 171 (348)
T ss_pred HHHHHHHcCCCCEEEEEeeccccC-HHHHHH-------------------------------------------------
Confidence 999999999999999999998876 211100
Q ss_pred HHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccce
Q 015576 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAA 267 (404)
Q Consensus 188 ~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA 267 (404)
+. . .. .. +..+ +++|++ +||||++
T Consensus 172 -~~-----~----~~-~l--------------------~~~~------------------~~~G~v-------~GEGA~a 195 (348)
T PRK06147 172 -YE-----A----RD-RL--------------------LTSQ------------------NSNGFI-------PGEAAAA 195 (348)
T ss_pred -HH-----H----hh-cc--------------------CCCC------------------CCCcee-------eeceEEE
Confidence 00 0 00 00 0000 157788 8999999
Q ss_pred eeecCHHHHHHcCCCceEEEEeeEEeccCC------CccccchHHHHHHHHHHcCCCCCCcceEeecccchHH-----HH
Q 015576 268 LVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV-----AI 336 (404)
Q Consensus 268 ~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~-----~~ 336 (404)
+||++.+.+++.+.++++ .+++...+.. ........++++++|+++|++++|||+|..|-..+.. ..
T Consensus 196 ~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~ 273 (348)
T PRK06147 196 VLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAAL 273 (348)
T ss_pred EEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHH
Confidence 999999999888888876 5555544331 1123456799999999999999999999999775543 22
Q ss_pred HHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc--CCceeEEeeeccccceeeeEEEe
Q 015576 337 ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 337 ~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~--~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.+.+.++-..+++..+..|..+||+.+|+|+.+++.++.+++++ .+.+.|++.+.-.|.-.++||++
T Consensus 274 A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g~r~a~~l~~ 342 (348)
T PRK06147 274 AEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDGARAALVLEY 342 (348)
T ss_pred HHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCCceEEEEEec
Confidence 33445664444455666789999999999999999999999987 56788999899999999999984
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=208.75 Aligned_cols=261 Identities=20% Similarity=0.201 Sum_probs=191.0
Q ss_pred ccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCC
Q 015576 21 ARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCS 100 (404)
Q Consensus 21 ~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCa 100 (404)
.+|++.+++...++++..+|+.+|+++||+++|+++++||.++++++.++... ..+..++..||++ +.++++++.+|+
T Consensus 35 ~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~-~~~~~v~~~Lg~~-~~~~~~v~~~Ca 112 (326)
T CHL00203 35 TRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLF-GSASQLQAEIGAT-RAVAFDITAACS 112 (326)
T ss_pred eccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCC-chHHHHHHHhCCC-CCceeeecccch
Confidence 67888877777788999999999999999999999999999999987765432 3467888999997 578999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcC
Q 015576 101 SGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180 (404)
Q Consensus 101 s~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg 180 (404)
|++.+|..|..+|++|.++++||+++|.++..-
T Consensus 113 sg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~----------------------------------------------- 145 (326)
T CHL00203 113 GFILALVTATQFIQNGSYKNILVVGADTLSKWI----------------------------------------------- 145 (326)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcC-----------------------------------------------
Confidence 999999999999999999999999999987510
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCc
Q 015576 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASI 260 (404)
Q Consensus 181 ~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 260 (404)
+.++. .+..+
T Consensus 146 ----------------------------------------------~~~~~-----------------~~~~~------- 155 (326)
T CHL00203 146 ----------------------------------------------DWSDR-----------------KTCIL------- 155 (326)
T ss_pred ----------------------------------------------CcccC-----------------CceEE-------
Confidence 00000 01122
Q ss_pred cccccceeeecCHHHHHHcCC--------CceEEEEeeE-----Eec-cCCC-c-----------cc---cchHHHHHHH
Q 015576 261 ISDGAAALVLVSGVKALELGL--------QVIAKIRGFA-----DAA-QAPE-W-----------FT---TAPSLAIPKA 311 (404)
Q Consensus 261 ~~DGAaA~vL~~~~~a~~~~~--------~~~~~i~g~~-----~~~-~~~~-~-----------~~---~~~~~a~~~a 311 (404)
+||||+|+||.+.+...-.+. .....+.... ... ..+. . +. ....++++++
T Consensus 156 fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 235 (326)
T CHL00203 156 FGDGAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKC 235 (326)
T ss_pred EcceeeEEEEEEcCCCCeEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHH
Confidence 799999999986432000000 0000110000 000 0000 0 00 0124578999
Q ss_pred HHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeec
Q 015576 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (404)
Q Consensus 312 l~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~ 391 (404)
|+++|++++|||++.+|+.+......+.+.||++++++... ...+||+.+++-...+.++++.-+.++|++.+...++
T Consensus 236 L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~--l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G 313 (326)
T CHL00203 236 LNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITN--LEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFG 313 (326)
T ss_pred HHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhH--HHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEc
Confidence 99999999999999999999999999999999998877543 4678999888877777777654444567787777676
Q ss_pred cccceeeeEEE
Q 015576 392 GGGGASALVLE 402 (404)
Q Consensus 392 ~gG~~~a~ll~ 402 (404)
.|-.+.++|++
T Consensus 314 ~G~s~~~~v~~ 324 (326)
T CHL00203 314 AGLTWGAIVLK 324 (326)
T ss_pred hhhhheEEEEE
Confidence 66677888887
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=208.74 Aligned_cols=260 Identities=19% Similarity=0.130 Sum_probs=190.9
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
+.+.+++-..++++..+|+.+|+++||+++|+++++||.+++++..++...+..+.+++..+|++ ..++++++.+|+|+
T Consensus 39 ~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~ 117 (325)
T PRK12879 39 TGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDINAACAGF 117 (325)
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEECccchHH
Confidence 33433433446788999999999999999999999999999999887776777889999999997 47899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~ 182 (404)
+.||..|..+|++|.++++||+++|.++...
T Consensus 118 ~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~------------------------------------------------- 148 (325)
T PRK12879 118 LYGLETANGLITSGLYKKVLVIGAERLSKVT------------------------------------------------- 148 (325)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-------------------------------------------------
Confidence 9999999999999999999999999876510
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccc
Q 015576 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (404)
Q Consensus 183 ~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (404)
+.+. +. ....+|
T Consensus 149 --------------------------------------------~~~~------------------~~------~~~~~G 160 (325)
T PRK12879 149 --------------------------------------------DYTD------------------RT------TCILFG 160 (325)
T ss_pred --------------------------------------------Cccc------------------cC------ceEEEe
Confidence 0000 00 112279
Q ss_pred cccceeeecCHHHHHHcCC---------CceEEEEeeEEeccC-CC-------ccc--------cchHHHHHHHHHHcCC
Q 015576 263 DGAAALVLVSGVKALELGL---------QVIAKIRGFADAAQA-PE-------WFT--------TAPSLAIPKAIANAGL 317 (404)
Q Consensus 263 DGAaA~vL~~~~~a~~~~~---------~~~~~i~g~~~~~~~-~~-------~~~--------~~~~~a~~~al~~agl 317 (404)
|||+|+||++++....... ....++.+.+..... .. ... ....++++++|+++|+
T Consensus 161 DgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~ 240 (325)
T PRK12879 161 DGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGL 240 (325)
T ss_pred ecceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999987542110000 000011111111000 00 000 0124678999999999
Q ss_pred CCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeecccccee
Q 015576 318 EASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGAS 397 (404)
Q Consensus 318 ~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~ 397 (404)
+++|||++.+|+.+......+.+.||++++++..+ ...+||+..++-...+.+++++-+.++|++.+...++.|-...
T Consensus 241 ~~~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~ 318 (325)
T PRK12879 241 TKDDIDWVIPHQANLRIIESLCEKLGIPMEKTLVS--VEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWA 318 (325)
T ss_pred CHHHCCEEEECCCCHHHHHHHHHHcCCCHHHhhhh--HhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhE
Confidence 99999999999999999999999999998876553 4678999988887777777655344567888877776666778
Q ss_pred eeEEE
Q 015576 398 ALVLE 402 (404)
Q Consensus 398 a~ll~ 402 (404)
++|++
T Consensus 319 ~~l~~ 323 (325)
T PRK12879 319 ALLVK 323 (325)
T ss_pred EEEEE
Confidence 88886
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=207.17 Aligned_cols=258 Identities=21% Similarity=0.160 Sum_probs=193.5
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCc
Q 015576 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (404)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas 101 (404)
++++.++....++++..+|+.+|++++|+++|+++++||.+++++..++...+..+.+++..+|+. ..++++++.+|+|
T Consensus 37 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~~~Cas 115 (319)
T PRK09352 37 RTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLSAACSG 115 (319)
T ss_pred hcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeeccccchh
Confidence 677766666677899999999999999999999999999999999877665566788999999995 6799999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCC
Q 015576 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (404)
Q Consensus 102 ~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~ 181 (404)
++.+|..|..+|++|.++++||+++|.++... .
T Consensus 116 g~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~--~--------------------------------------------- 148 (319)
T PRK09352 116 FVYALSTADQFIRSGAYKNVLVIGAEKLSRIV--D--------------------------------------------- 148 (319)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhcccc--C---------------------------------------------
Confidence 99999999999999999999999999977510 0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcc
Q 015576 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (404)
Q Consensus 182 ~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (404)
+ .++ .. +..+
T Consensus 149 ------------------------------~-------------~~~--------------------~~-------~~~~ 158 (319)
T PRK09352 149 ------------------------------W-------------TDR--------------------ST-------CVLF 158 (319)
T ss_pred ------------------------------c-------------ccC--------------------Cc-------eEEE
Confidence 0 000 00 1127
Q ss_pred ccccceeeecCHHHHHHcCCCceEEEEeeEEecc---CCCc-------------cc--------cchHHHHHHHHHHcCC
Q 015576 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ---APEW-------------FT--------TAPSLAIPKAIANAGL 317 (404)
Q Consensus 262 ~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~---~~~~-------------~~--------~~~~~a~~~al~~agl 317 (404)
||||+|+||++++.. +.. ...+...+...+ .|.. .. ....++++++|+++|+
T Consensus 159 gDGaaA~ll~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~ 234 (319)
T PRK09352 159 GDGAGAVVLGASEEP---GIL-STHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGL 234 (319)
T ss_pred eccceEEEEEEcCCC---CeE-EEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999986421 100 011111111100 0000 00 0124688999999999
Q ss_pred CCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeecccccee
Q 015576 318 EASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGAS 397 (404)
Q Consensus 318 ~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~ 397 (404)
+++|||++.+|+.+........+.||++++++..+ ...+||..+++-+..+.+++..=+.++|++.+...++.|....
T Consensus 235 ~~~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~ 312 (319)
T PRK09352 235 TPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVT--VDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWG 312 (319)
T ss_pred CHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeE
Confidence 99999999999999999999999999998876433 4568999888877777776654334567787777676666778
Q ss_pred eeEEEe
Q 015576 398 ALVLEL 403 (404)
Q Consensus 398 a~ll~~ 403 (404)
++||+.
T Consensus 313 ~~ll~~ 318 (319)
T PRK09352 313 AALVRW 318 (319)
T ss_pred EEEEEe
Confidence 888873
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=208.11 Aligned_cols=251 Identities=18% Similarity=0.230 Sum_probs=188.6
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCc
Q 015576 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (404)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas 101 (404)
++.+.+++-..++++..+|+.+|+++||+++|+++++||.+++++..+.+..+..+..++..+|++++.++++++.+|++
T Consensus 35 ~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~aC~g 114 (345)
T TIGR00748 35 GLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEFACKA 114 (345)
T ss_pred ccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHHhHHH
Confidence 34444444344678999999999999999999999999999999887776667778899999999756789999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCC
Q 015576 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (404)
Q Consensus 102 ~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~ 181 (404)
+..+|..|..+|++|.++++||++.|.++..|..
T Consensus 115 ~~~al~~A~~~i~sg~~~~vLVv~~d~~~~~~~~---------------------------------------------- 148 (345)
T TIGR00748 115 GTAGIQACMGLVASGMIKYGLAIGADTAQGAPGD---------------------------------------------- 148 (345)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEeecccCCCc----------------------------------------------
Confidence 9999999999999999999999999987531100
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcc
Q 015576 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (404)
Q Consensus 182 ~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (404)
. + . +. +
T Consensus 149 ------------------------------~-------------~----------------------~--~~-------~ 154 (345)
T TIGR00748 149 ------------------------------A-------------L----------------------E--YT-------A 154 (345)
T ss_pred ------------------------------c-------------C----------------------c--cc-------C
Confidence 0 0 0 11 5
Q ss_pred ccccceeeecCHHHHHHcCCCceEEEEeeE-EeccC-----------CCc---c------ccchHHHHHHHHHHcCCCCC
Q 015576 262 SDGAAALVLVSGVKALELGLQVIAKIRGFA-DAAQA-----------PEW---F------TTAPSLAIPKAIANAGLEAS 320 (404)
Q Consensus 262 ~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~-~~~~~-----------~~~---~------~~~~~~a~~~al~~agl~~~ 320 (404)
||||+|+||...+.. ..+.+.. ...+. +.. + .....++++++|+++|++++
T Consensus 155 GDGAaA~vl~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~ 226 (345)
T TIGR00748 155 GAGGAAYIIGEKNTV--------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPE 226 (345)
T ss_pred CCceEEEEEccCCcc--------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHH
Confidence 999999999854311 1121111 11000 000 0 01123788899999999999
Q ss_pred CcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeE
Q 015576 321 QIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400 (404)
Q Consensus 321 dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~l 400 (404)
|||++.+|+++..+...+.+.||++++++..+--...+||+..++-...+.+++.+ .++|++.+...++.|-++.+++
T Consensus 227 did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~--~~~Gd~vll~~~G~G~s~~~~~ 304 (345)
T TIGR00748 227 DFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI--AEPGDRILAVSYGSGAGSDAFS 304 (345)
T ss_pred HcCEEEeCCCChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh--cCCCCEEEEEEecCCcceeEEE
Confidence 99999999999999999999999998776543111468999999988888888763 4567777777676666777777
Q ss_pred EE
Q 015576 401 LE 402 (404)
Q Consensus 401 l~ 402 (404)
++
T Consensus 305 ~~ 306 (345)
T TIGR00748 305 IV 306 (345)
T ss_pred EE
Confidence 76
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=211.85 Aligned_cols=258 Identities=22% Similarity=0.208 Sum_probs=189.0
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCc
Q 015576 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (404)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas 101 (404)
+|++.+++...++++..+|+.+|+++||+++|+++++||.+++++..+.... ..+..++..||++ +.++++++.+|+|
T Consensus 81 ~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~-~~a~~v~~~LG~~-~~~~~dv~~~Ca~ 158 (379)
T PLN02326 81 RTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLF-GSAPQVQAALGCT-NALAFDLTAACSG 158 (379)
T ss_pred ccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccC-cHHHHHHHHhCCC-CCceeeccccchH
Confidence 3555555445577899999999999999999999999999999988765432 3577899999997 6889999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCC
Q 015576 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (404)
Q Consensus 102 ~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~ 181 (404)
++.||..|..+|++|.++++||++.|.++... .
T Consensus 159 ~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~--~--------------------------------------------- 191 (379)
T PLN02326 159 FVLGLVTAARFIRGGGYKNVLVIGADALSRYV--D--------------------------------------------- 191 (379)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEechhcCCC--C---------------------------------------------
Confidence 99999999999999999999999999977511 0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcc
Q 015576 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (404)
Q Consensus 182 ~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (404)
++ | +. ++..+
T Consensus 192 --------------------------------------------~~-d-------------------~~------~~~lf 201 (379)
T PLN02326 192 --------------------------------------------WT-D-------------------RG------TCILF 201 (379)
T ss_pred --------------------------------------------cc-c-------------------cC------ceEEE
Confidence 00 0 00 11238
Q ss_pred ccccceeeecCHHHHHHcCCCceEEEEee------------EEe--------c---cCC---C-c--cc-----------
Q 015576 262 SDGAAALVLVSGVKALELGLQVIAKIRGF------------ADA--------A---QAP---E-W--FT----------- 301 (404)
Q Consensus 262 ~DGAaA~vL~~~~~a~~~~~~~~~~i~g~------------~~~--------~---~~~---~-~--~~----------- 301 (404)
||||+|+||++++... .+... .++... +.. . +.+ . . +.
T Consensus 202 GDGAaAvlL~~~~~~~-~~i~~-~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~ 279 (379)
T PLN02326 202 GDGAGAVVLQACDDDE-DGLLG-FDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAV 279 (379)
T ss_pred cceeEEEEEEEcCCCC-CceEE-EEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHH
Confidence 9999999998753211 00000 011110 000 0 000 0 0 00
Q ss_pred cchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC
Q 015576 302 TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (404)
Q Consensus 302 ~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~ 381 (404)
....++++++|+++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+.+++-...|.+++..-+-++
T Consensus 280 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~--l~~~GNt~sAsi~~~L~~~~~~g~~~~ 357 (379)
T PLN02326 280 RCVPQVIESALQKAGLTAESIDWLLLHQANQRIIDAVAQRLGIPPEKVISN--LANYGNTSAASIPLALDEAVRSGKVKK 357 (379)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeec--HhhcCcHHHHHHHHHHHHHHHcCCCCC
Confidence 012357889999999999999999999999999999999999998877544 467899988887777777765444456
Q ss_pred CceeEEeeeccccceeeeEEE
Q 015576 382 GKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 382 ~~~gl~~~~~~gG~~~a~ll~ 402 (404)
|++.+...++.|-.+.++||+
T Consensus 358 Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 358 GDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred CCEEEEEEEChhheeeEEEEE
Confidence 788887777666677788876
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-24 Score=205.39 Aligned_cols=253 Identities=21% Similarity=0.187 Sum_probs=192.4
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCc
Q 015576 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (404)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas 101 (404)
++++.+++...+++++.+|+.+|+++||+++|+++++||.+++++..+....+..+.+++..+|++ +.++++++.+|+|
T Consensus 36 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~~~C~s 114 (318)
T TIGR00747 36 RTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLSAACAG 114 (318)
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehhhhhHH
Confidence 466656555667889999999999999999999999999999999887665666788999999997 5789999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCC
Q 015576 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (404)
Q Consensus 102 ~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~ 181 (404)
++.+|..|+.+|++|.++++||+++|.++. +. .
T Consensus 115 ~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~-~~-~--------------------------------------------- 147 (318)
T TIGR00747 115 FIYALSVAKQYIESGKYKTVLVVGAEKLSS-TL-D--------------------------------------------- 147 (318)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhcC-cC-C---------------------------------------------
Confidence 999999999999999999999999998764 10 0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcc
Q 015576 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (404)
Q Consensus 182 ~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (404)
+ .+ +. .+..+
T Consensus 148 ------------------------------~-------------~~---------------------~~------~~~~~ 157 (318)
T TIGR00747 148 ------------------------------W-------------TD---------------------RG------TCVLF 157 (318)
T ss_pred ------------------------------c-------------CC---------------------CC------eEEEE
Confidence 0 00 00 11127
Q ss_pred ccccceeeecCHHHHHHcCCCceEEEEeeEEeccC--------CC-----c-------------c---ccchHHHHHHHH
Q 015576 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------PE-----W-------------F---TTAPSLAIPKAI 312 (404)
Q Consensus 262 ~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~--------~~-----~-------------~---~~~~~~a~~~al 312 (404)
||||+|+||++.+... . +......++. |. . + .....++++++|
T Consensus 158 GDGAaA~lL~~~~~~~----~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 229 (318)
T TIGR00747 158 GDGAGAVVLGESEDPG----G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETL 229 (318)
T ss_pred ecceeEEEEeecCCCC----c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHH
Confidence 9999999998764211 1 1111111100 00 0 0 011246788999
Q ss_pred HHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeecc
Q 015576 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNG 392 (404)
Q Consensus 313 ~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~ 392 (404)
+++|++++|||++.+|+.+......+.+.||++++++..+ ..-+||+.+++-...+.+++..=+.+.|++.+....+.
T Consensus 230 ~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~--~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~ 307 (318)
T TIGR00747 230 EANGLDPEDIDWFVPHQANLRIIEALAKRLELDMSQVVKT--VHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGG 307 (318)
T ss_pred HHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeeh--HhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEeh
Confidence 9999999999999999999999999999999998876643 34589999999888887777654445678888776766
Q ss_pred ccceeeeEEE
Q 015576 393 GGGASALVLE 402 (404)
Q Consensus 393 gG~~~a~ll~ 402 (404)
|....++||+
T Consensus 308 G~t~~~~~l~ 317 (318)
T TIGR00747 308 GLTWGAALVR 317 (318)
T ss_pred hheeeEEEEE
Confidence 6677788876
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-24 Score=208.45 Aligned_cols=262 Identities=20% Similarity=0.126 Sum_probs=188.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHH
Q 015576 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (404)
Q Consensus 32 ~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~ 111 (404)
.+++++.+|+.+|+++||+++|+++++||.+++++..+++..+..+..++..||+++++++++++.+|+|++.||..|..
T Consensus 56 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~ 135 (338)
T PRK09258 56 PEGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAAN 135 (338)
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999887777788899999999997568899999999999999999999
Q ss_pred HHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHH
Q 015576 112 SIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAI 191 (404)
Q Consensus 112 ~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~ 191 (404)
+|++|.++++||+++|..+........
T Consensus 136 ~i~~g~~~~~Lvv~~e~~s~~~~~~~~----------------------------------------------------- 162 (338)
T PRK09258 136 MIELGQIDYALVVSGESAREIVEATID----------------------------------------------------- 162 (338)
T ss_pred HHHcCCCCEEEEEEecccchhccchhh-----------------------------------------------------
Confidence 999999999999999987752100000
Q ss_pred HHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeec
Q 015576 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLV 271 (404)
Q Consensus 192 ~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~ 271 (404)
.+.. + .+ +.+ .+........+||||+|+||+
T Consensus 163 -------------~~~~---~---------------~~------~~~------------~~~~~~~~~~~GDGA~A~ll~ 193 (338)
T PRK09258 163 -------------RLLA---P---------------ET------TRE------------DFAQSFATLTLGSGAAAAVLT 193 (338)
T ss_pred -------------hhcc---C---------------cc------chh------------hhhhccceEEecccceEEEEe
Confidence 0000 0 00 000 000011122279999999998
Q ss_pred CHHHHHHcCCCceEEEEeeEEeccC---------CCccc-----------cchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 272 SGVKALELGLQVIAKIRGFADAAQA---------PEWFT-----------TAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 272 ~~~~a~~~~~~~~~~i~g~~~~~~~---------~~~~~-----------~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
+.+.. ..+ ..+.+.....+. ...+. ....++++++|+++|++++|||++.+|+.+
T Consensus 194 ~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~ 268 (338)
T PRK09258 194 RGSLH-PRG----HRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVG 268 (338)
T ss_pred cCCCC-CCc----ceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCC
Confidence 75421 011 123332221110 00000 112358889999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
......+.+.||++++++..+- .-+||+.+++-...+.+++.+-+.+.|++.+...++.|-...++++|
T Consensus 269 ~~~~~~~~~~lgl~~~k~~~~~--~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 269 AAHTRAILKALGIDPEKVFTTF--PTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred HHHHHHHHHHhCCCHHHceehH--hhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeee
Confidence 9999999999999988765542 46899999988888877766534456788887767666566666665
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-24 Score=205.31 Aligned_cols=257 Identities=16% Similarity=0.121 Sum_probs=187.1
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
+++..++-..++++..+|+.+|+++||+++|+++++||.++++++++++..|..+.+++..||++ +.++++++.+|+++
T Consensus 38 ~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~ 116 (326)
T PRK05963 38 TGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAGACAGF 116 (326)
T ss_pred cCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccchhhHH
Confidence 44444333446789999999999999999999999999999999988877788889999999997 57899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~ 182 (404)
+.||..|..+|++|. +.+||+++|..+...
T Consensus 117 ~~aL~~A~~~l~~~~-~~aLVv~~d~~s~~~------------------------------------------------- 146 (326)
T PRK05963 117 LYALVLADGFVRAQG-KPVLVVAANILSRRI------------------------------------------------- 146 (326)
T ss_pred HHHHHHHHHHHHcCC-CeEEEEEechhhccC-------------------------------------------------
Confidence 999999999999985 899999999876410
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccc
Q 015576 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (404)
Q Consensus 183 ~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (404)
+.++ + ....+ +|
T Consensus 147 --------------------------------------------~~~~--------------~---~~~~l-------fG 158 (326)
T PRK05963 147 --------------------------------------------NMAE--------------R---ASAVL-------FA 158 (326)
T ss_pred --------------------------------------------Cccc--------------c---CceEE-------Ee
Confidence 0000 0 01122 79
Q ss_pred cccceeeecCHHHHHHcCCCceEEEEeeEEecc----------CC--------C-cc------------ccchHHHHHHH
Q 015576 263 DGAAALVLVSGVKALELGLQVIAKIRGFADAAQ----------AP--------E-WF------------TTAPSLAIPKA 311 (404)
Q Consensus 263 DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~----------~~--------~-~~------------~~~~~~a~~~a 311 (404)
|||+|+||+.++... .+... ..+...+...+ .| . .+ .....++++++
T Consensus 159 DgA~A~ll~~~~~~~-~~~l~-~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (326)
T PRK05963 159 DAAGAVVLAPSAKAN-SGVLG-SQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNV 236 (326)
T ss_pred ecceEEEEEecCCCC-CceEE-EEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHH
Confidence 999999998643210 00000 00110000000 00 0 00 00124678899
Q ss_pred HHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeec
Q 015576 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (404)
Q Consensus 312 l~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~ 391 (404)
|+++|++++|||++.+|+.+......+.+.||++++++..+ ...+||+.+++-...+.++...-+.++|++.+...++
T Consensus 237 L~~~gl~~~did~~~~h~~~~~~~~~~~~~l~l~~~k~~~~--l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G 314 (326)
T PRK05963 237 LASAAMTPQDIDRFFPHQANARIVDKVCETIGIPRAKAAST--LETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAG 314 (326)
T ss_pred HHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhh--HHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEe
Confidence 99999999999999999999999999999999998876533 4678999888866666655544334567888887776
Q ss_pred cccceeeeEEE
Q 015576 392 GGGGASALVLE 402 (404)
Q Consensus 392 ~gG~~~a~ll~ 402 (404)
.|-.+.++|++
T Consensus 315 ~G~~~~~~ll~ 325 (326)
T PRK05963 315 AGMTGGAVVMR 325 (326)
T ss_pred hhhhheeeEEe
Confidence 66677888886
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.6e-23 Score=201.38 Aligned_cols=238 Identities=19% Similarity=0.138 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCCC-----------------------------CC---------
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL-----------------------------GQ--------- 74 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~~-----------------------------~~--------- 74 (404)
...|+..|+++||+|+|++....+ ++++|+..+... .+
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 556889999999999999643322 467777544310 01
Q ss_pred cHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccc
Q 015576 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM 154 (404)
Q Consensus 75 ~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~ 154 (404)
..+.+++..+|+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.... |.....
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~-~~~~~~---------------- 213 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAER-PDMLLL---------------- 213 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH----------------
Confidence 256788999999 5899999999999999999999999999999999999997554 321110
Q ss_pred cccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc
Q 015576 155 LKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK 234 (404)
Q Consensus 155 ~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~ 234 (404)
++.. +.+. ...++|+ |++
T Consensus 214 ---------------------~~~~------------------------~~ls---------~~~~~p~--~d~------ 231 (398)
T PRK06519 214 ---------------------YELG------------------------GLLL---------KGGWAPV--WSR------ 231 (398)
T ss_pred ---------------------HHHc------------------------CccC---------CCCCCch--hcc------
Confidence 0000 0000 0111220 222
Q ss_pred CCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHH
Q 015576 235 FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314 (404)
Q Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~ 314 (404)
++ .+++|++ +||||+++||++.+.|++++.+++++|.|++.... +. ......++++++|++
T Consensus 232 ---------~~-~~r~G~v-------~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~-~~-~~~~~~~am~~AL~~ 292 (398)
T PRK06519 232 ---------GG-EDGGGFI-------LGSGGAFLVLESREHAEARGARPYARISGVESDRA-RR-APGDLEASLERLLKP 292 (398)
T ss_pred ---------Cc-cCCCCee-------eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC-CC-ChHHHHHHHHHHHHH
Confidence 00 1278998 79999999999999999999999999999965432 22 234567899999999
Q ss_pred cCCCCCCcceEeecccchHH----HHHH-HHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc
Q 015576 315 AGLEASQIDYYEINEAFSVV----AIAN-QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 315 agl~~~dId~~~~hd~~~~~----~~~~-~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
+|+ ++|||||+.|-..+.. +... .+.++ ++++..|..+||+.+++|+..++..+++|+++
T Consensus 293 Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~-----~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 293 AGG-LAAPTAVISGATGAHPATAEEKAALEAALA-----GPVRGIGTLFGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred CCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC-----CCccccchhhccchHHHHHHHHHHHHHHHhcC
Confidence 999 8999999999877643 3323 33344 34677899999999999999999999999986
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=204.65 Aligned_cols=253 Identities=11% Similarity=0.098 Sum_probs=182.7
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
|++.+|+-..++++..+|+.+|+++||+++|+++++||.+|++++++++..|..+.+++..||+++++++++++.+|+++
T Consensus 46 ~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~ 125 (353)
T PRK12880 46 IGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGY 125 (353)
T ss_pred cCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHHH
Confidence 44444443445789999999999999999999999999999999999888999999999999998678899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~ 182 (404)
+.+|..|..+|++|..+ +||+++|..|..
T Consensus 126 ~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~-------------------------------------------------- 154 (353)
T PRK12880 126 LYGLFVAHSLIQSGLGK-ILLICGDTLSKF-------------------------------------------------- 154 (353)
T ss_pred HHHHHHHHHHHHcCCCC-EEEEEehhhhcc--------------------------------------------------
Confidence 99999999999999999 999999987751
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccc
Q 015576 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (404)
Q Consensus 183 ~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (404)
++.++. ...++ +|
T Consensus 155 -------------------------------------------~~~~d~-----------------~~~~l-------FG 167 (353)
T PRK12880 155 -------------------------------------------IHPKNM-----------------NLAPI-------FG 167 (353)
T ss_pred -------------------------------------------CCcccC-----------------Cceee-------ec
Confidence 000000 00022 89
Q ss_pred cccceeeecCHHHHHHcCCCceEEEEeeEEecc----------CCC--------c-------------c-cc--------
Q 015576 263 DGAAALVLVSGVKALELGLQVIAKIRGFADAAQ----------APE--------W-------------F-TT-------- 302 (404)
Q Consensus 263 DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~----------~~~--------~-------------~-~~-------- 302 (404)
|||+|+||+..+... ....+...+...+ .+. . + ..
T Consensus 168 DGAaA~vl~~~~~~~-----~~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~ 242 (353)
T PRK12880 168 DGVSATLIEKTDFNE-----AFFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALE 242 (353)
T ss_pred ccceEEEEEecCCCC-----ceEEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHH
Confidence 999999998543210 0011111111000 000 0 0 00
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCC
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~ 382 (404)
....+++++|+++|++++|||++.+||.+..+...+.+.||++++++.. -....+||+.++|-...+.++ ..++.
T Consensus 243 ~~~~~i~~~L~~~gl~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~-~~l~~~GNtssasip~~L~~~----~~~~~ 317 (353)
T PRK12880 243 CEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPN-FIMEKYANLSACSLPALLCEL----DTPKE 317 (353)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh-hhHHhhCCHHHHHHHHHHHHH----HHcCC
Confidence 1146889999999999999999999999999999999999999888631 112447887666644444443 33333
Q ss_pred ceeEEeeeccccceeeeEEEe
Q 015576 383 KYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 383 ~~gl~~~~~~gG~~~a~ll~~ 403 (404)
-+.+...+++|-.+.++||+.
T Consensus 318 ~~~ll~~~G~G~s~g~~ll~~ 338 (353)
T PRK12880 318 FKASLSAFGAGLSWGSAVLNF 338 (353)
T ss_pred cEEEEEEEchhhhheEeEEEE
Confidence 345666666666788888874
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=203.25 Aligned_cols=245 Identities=21% Similarity=0.230 Sum_probs=185.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHH
Q 015576 28 FLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVM 107 (404)
Q Consensus 28 ~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~ 107 (404)
++-..++++..+|+.+|+++||+++|+++++||.+++++.++.+..+..+.+++..||+++..++++++.+|++++.+|.
T Consensus 42 R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~ 121 (347)
T PRK04262 42 KSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQ 121 (347)
T ss_pred eecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHH
Confidence 33344678999999999999999999999999999999988776667778899999999755788999999999999999
Q ss_pred HHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHH
Q 015576 108 LAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187 (404)
Q Consensus 108 ~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a 187 (404)
.|..+|++|.++++||+++|.....|.
T Consensus 122 ~A~~~i~sg~~~~aLVv~~e~~~~~~~----------------------------------------------------- 148 (347)
T PRK04262 122 AAMGLVKSGMIKYALAIGADTAQGAPG----------------------------------------------------- 148 (347)
T ss_pred HHHHHHHcCCCCEEEEEEEeeeccCCC-----------------------------------------------------
Confidence 999999999999999999997321000
Q ss_pred HHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccce
Q 015576 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAA 267 (404)
Q Consensus 188 ~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA 267 (404)
+ ..-+. +||||+|
T Consensus 149 -----------------------------------------~-------------------~~~~~-------~GDGA~A 161 (347)
T PRK04262 149 -----------------------------------------D-------------------ALEYT-------AAAGGAA 161 (347)
T ss_pred -----------------------------------------C-------------------CCCCc-------CCCCcEE
Confidence 0 00011 5999999
Q ss_pred eeecCHHHHHHcCCCceEEEEeeE-EeccC-----------CC---cc------ccchHHHHHHHHHHcCCCCCCcceEe
Q 015576 268 LVLVSGVKALELGLQVIAKIRGFA-DAAQA-----------PE---WF------TTAPSLAIPKAIANAGLEASQIDYYE 326 (404)
Q Consensus 268 ~vL~~~~~a~~~~~~~~~~i~g~~-~~~~~-----------~~---~~------~~~~~~a~~~al~~agl~~~dId~~~ 326 (404)
+||..++.. .+|.+.. ...+. +. .+ .....++++++|+++|++++|||++.
T Consensus 162 ~ll~~~~~~--------~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v 233 (347)
T PRK04262 162 FIIGKEEVI--------AEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAV 233 (347)
T ss_pred EEEecCccc--------ceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceee
Confidence 999864311 2232221 10010 00 00 01235789999999999999999999
Q ss_pred ecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 327 INEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 327 ~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
+|+++..+...+.+.||++++++..+--..-+||+.+++-...+.+++.+ .++|++.+...++.|-...+++++
T Consensus 234 ~Hq~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~--~~~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 234 FHQPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV--AKPGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred cCCCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh--CCCCCEEEEEecCCCcceeeEEEE
Confidence 99999999999999999998876532223678999999988888887764 356777777766665566666665
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=202.12 Aligned_cols=250 Identities=21% Similarity=0.158 Sum_probs=187.8
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
+.+.+++-..+++++.+|+.+|+++||+++|+++++||.+++++..++...+..+.+++..+|++ +.++++++.+|+|+
T Consensus 36 ~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~ 114 (320)
T cd00830 36 TGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDINAACSGF 114 (320)
T ss_pred cCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeeccccchHH
Confidence 44444444455689999999999999999999999999999999887665677889999999997 68999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~ 182 (404)
+.+|..|..+|++|.++++||+++|.++....
T Consensus 115 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~------------------------------------------------ 146 (320)
T cd00830 115 LYGLSTAAGLIRSGGAKNVLVVGAETLSRILD------------------------------------------------ 146 (320)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEehhhccccC------------------------------------------------
Confidence 99999999999999999999999999875100
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccc
Q 015576 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (404)
Q Consensus 183 ~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (404)
++.. ..+.+ +|
T Consensus 147 -------------------------------------------~~~~-------------------~~~~~-------~G 157 (320)
T cd00830 147 -------------------------------------------WTDR-------------------STAVL-------FG 157 (320)
T ss_pred -------------------------------------------cccC-------------------CceEE-------Ee
Confidence 0000 11133 79
Q ss_pred cccceeeecCHHHHHHcCCCceEEEEeeEEeccC--------CC---------------c--c---------ccchHHHH
Q 015576 263 DGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------PE---------------W--F---------TTAPSLAI 308 (404)
Q Consensus 263 DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~--------~~---------------~--~---------~~~~~~a~ 308 (404)
|||+|+||++.+. +. .+.+....++. +. . + .....+++
T Consensus 158 DgAaA~ll~~~~~----~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (320)
T cd00830 158 DGAGAVVLEATEE----DP----GILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESI 229 (320)
T ss_pred ccceEEEEEecCC----CC----cEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHH
Confidence 9999999987642 11 12222221110 00 0 0 01225789
Q ss_pred HHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEe
Q 015576 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (404)
Q Consensus 309 ~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~ 388 (404)
+++|+++|++++|||++.+|+.+......+.+.||++++++... ...+||..+++-...+.+++.+-+.++|++.+..
T Consensus 230 ~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgl~~~~~~~~--~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~ 307 (320)
T cd00830 230 EEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVN--LDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLL 307 (320)
T ss_pred HHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999998877543 4568999999988888777765444567777766
Q ss_pred eeccccceeeeE
Q 015576 389 ICNGGGGASALV 400 (404)
Q Consensus 389 ~~~~gG~~~a~l 400 (404)
..+.|-...++|
T Consensus 308 ~~G~G~~~~~~l 319 (320)
T cd00830 308 GFGAGLTWGAAL 319 (320)
T ss_pred EEchHHhhHHhh
Confidence 555444444443
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.1e-23 Score=234.95 Aligned_cols=264 Identities=16% Similarity=0.216 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC------------------------------------------
Q 015576 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN------------------------------------------ 71 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~------------------------------------------ 71 (404)
..|+.+++++||+|||+.++ .+ ++++|+..+..
T Consensus 94 qrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (2582)
T TIGR02813 94 QLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHW 172 (2582)
T ss_pred HHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhccccccc
Confidence 35889999999999998543 33 57777643210
Q ss_pred -----CC---CcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCC
Q 015576 72 -----LG---QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGS 143 (404)
Q Consensus 72 -----~~---~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~ 143 (404)
.+ ...+.+|+..+|| ++|+++|+++|+|++.||+.|++.|++|++|.+||+|++.... |.....
T Consensus 173 ~~~~~~g~~~n~~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~-p~~~~~----- 244 (2582)
T TIGR02813 173 EENSFPGSLGNVISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS-PFMYMS----- 244 (2582)
T ss_pred CccccccccccHHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC-HHHHHH-----
Confidence 00 1257789999999 6899999999999999999999999999999999999997654 321110
Q ss_pred CCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCc
Q 015576 144 RLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPF 223 (404)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~ 223 (404)
| . +.+.+. ++..|+|
T Consensus 245 ---------------f-----------------s------------------------~~~~lS--------~~g~crp- 259 (2582)
T TIGR02813 245 ---------------F-----------------S------------------------KTPAFT--------TNEDIQP- 259 (2582)
T ss_pred ---------------H-----------------H------------------------hccCcC--------CCCCccC-
Confidence 0 0 000010 2345677
Q ss_pred eeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc--c-
Q 015576 224 IIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW--F- 300 (404)
Q Consensus 224 ~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~--~- 300 (404)
||.+ .+|++ +|||++++||.+.+.|++.|+++++.|.|++.++++... .
T Consensus 260 --FD~~-------------------adG~v-------~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~ita 311 (2582)
T TIGR02813 260 --FDID-------------------SKGMM-------IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYA 311 (2582)
T ss_pred --CCCC-------------------CCccc-------ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcC
Confidence 8877 89999 699999999999999999999999999999999876422 1
Q ss_pred --ccchHHHHHHHHHHcCCCCCCcceEeecccchHH-----HHHHHHHhCCC---CCCcCCCCCccccCCcccchHHHHH
Q 015576 301 --TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV-----AIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARIL 370 (404)
Q Consensus 301 --~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~-----~~~~~e~lg~~---~~~vn~~Gg~~~~Gh~~gasG~~~l 370 (404)
..+..++++++|+++|++++||||||.|-..+.. ...+.+.|+-. ..++.++..|..+||+.+++|+..+
T Consensus 312 P~~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~l 391 (2582)
T TIGR02813 312 PRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGM 391 (2582)
T ss_pred CCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHH
Confidence 2244789999999999999999999999877643 23334456543 2357888999999999999999999
Q ss_pred HHHHHHHHhcC-------------------------------------CceeEEeeeccccceeeeEEEe
Q 015576 371 VTLLGVLRHKK-------------------------------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 371 ~~~~~~l~~~~-------------------------------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+.++..|+++- .++.+++.++.||.+..+|||.
T Consensus 392 ik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee 461 (2582)
T TIGR02813 392 IKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEE 461 (2582)
T ss_pred HHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEee
Confidence 99999998751 1355688899999999999985
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=203.99 Aligned_cols=245 Identities=18% Similarity=0.129 Sum_probs=176.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHc
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~a 115 (404)
+..+|+.+|+++||+++|+++++||.+++++..++...+..+..++..+|++ .++++++.+|+|++.+|..|..+|++
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~~ 171 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIRS 171 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHHc
Confidence 3468999999999999999999999999998876655666788899999994 68999999999999999999999999
Q ss_pred CCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 015576 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (404)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~ 195 (404)
|.+++|||+++|.++... .
T Consensus 172 g~~~~vLvv~~e~~s~~~--~----------------------------------------------------------- 190 (372)
T PRK07515 172 GSARRVLVVNPEICSGHL--N----------------------------------------------------------- 190 (372)
T ss_pred CCCCEEEEEeeecccccc--c-----------------------------------------------------------
Confidence 999999999999876410 0
Q ss_pred HHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHH
Q 015576 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (404)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~ 275 (404)
+ -++ ..+++ +||||+|+||++.+.
T Consensus 191 ----------------~-------------~d~--------------------~~~~l-------fGDgAaA~vL~~~~~ 214 (372)
T PRK07515 191 ----------------F-------------RDR--------------------DSHFI-------FGDVATAVIVERADT 214 (372)
T ss_pred ----------------c-------------cCC--------------------CCCEE-------ecCccEEEEEeeccc
Confidence 0 000 12344 799999999997654
Q ss_pred HHHcC-CCceEEEEee----------EEec-cCCCc----------ccc--------chHHHHHHHHHHcCCCCCCcceE
Q 015576 276 ALELG-LQVIAKIRGF----------ADAA-QAPEW----------FTT--------APSLAIPKAIANAGLEASQIDYY 325 (404)
Q Consensus 276 a~~~~-~~~~~~i~g~----------~~~~-~~~~~----------~~~--------~~~~a~~~al~~agl~~~dId~~ 325 (404)
+...+ ..++...... +... ..+.. ... ...++++++|+++|++++|||++
T Consensus 215 ~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~ 294 (372)
T PRK07515 215 ATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRF 294 (372)
T ss_pred cccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 32111 1122211100 0000 00000 000 13578999999999999999999
Q ss_pred eecccchHHHHHHHHH-hCCCC--CCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 326 EINEAFSVVAIANQKL-LGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 326 ~~hd~~~~~~~~~~e~-lg~~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
.+|+.+........+. ||+.. ++.... ..-+||+.+++-...+.++...+ +.|++.+...++.|-...++||+
T Consensus 295 ~~Hq~~~~~~d~~~~~llg~~~~~~~~~~~--~~~~GNt~sasi~~~L~~~~~~~--~~Gd~vll~~~G~G~~~~~~ll~ 370 (372)
T PRK07515 295 WLHQANINMNQLIGKKVLGRDATPEEAPVI--LDEYANTSSAGSIIAFHKHSDDL--AAGDLGVICSFGAGYSIGSVIVR 370 (372)
T ss_pred EECCCCHHHHHHHHHHhccCCCChhhceEe--HHhcCCchhhHHHHHHHHHhccC--CCCCEEEEEEecccHHHHHHHhc
Confidence 9999999988877887 67543 332222 46789999999877777764432 46778777767666666777776
Q ss_pred e
Q 015576 403 L 403 (404)
Q Consensus 403 ~ 403 (404)
+
T Consensus 371 ~ 371 (372)
T PRK07515 371 K 371 (372)
T ss_pred c
Confidence 5
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=199.98 Aligned_cols=268 Identities=21% Similarity=0.207 Sum_probs=180.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHH
Q 015576 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 34 ~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I 113 (404)
+.+..+|+.+|+++||+++|+++++||.+++++..+++..+..+..++..||++ ..++++++.+|+|++.+|..|..+|
T Consensus 60 ~~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i 138 (378)
T PRK06816 60 THSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSV 138 (378)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999887665555667888999997 5789999999999999999999999
Q ss_pred HcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015576 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~ 193 (404)
++|.++++||+++|.+|..-... .+.. ++...
T Consensus 139 ~sg~~~~vLvv~~E~~s~~~~~~------------------------------~~~~--------------~~~~~---- 170 (378)
T PRK06816 139 KAGESRNAVATASELASRWFRAS------------------------------RFEA--------------EEEKL---- 170 (378)
T ss_pred HCCCCCEEEEEeEccchhhhhhh------------------------------hhhh--------------HHHHh----
Confidence 99999999999999988621000 0000 00000
Q ss_pred HHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCH
Q 015576 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (404)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~ 273 (404)
|. ..+....+ |+.+ ..|++ +||||+|+||+..
T Consensus 171 ------------------~~-~~~~~~~~---~~~~-------------------~~~~~-------fGDGA~A~vl~~~ 202 (378)
T PRK06816 171 ------------------AE-LEENPEIA---FEKD-------------------FLRWM-------LSDGAGAVLLENK 202 (378)
T ss_pred ------------------hc-CcccCCCC---CCCC-------------------CCCEe-------eecccEEEEEEec
Confidence 00 00000011 2222 33455 7999999999865
Q ss_pred HHHHHcCCCceE-EE--EeeEE-------ec--cCC-----Cc---------------c---c--------cchHHHHHH
Q 015576 274 VKALELGLQVIA-KI--RGFAD-------AA--QAP-----EW---------------F---T--------TAPSLAIPK 310 (404)
Q Consensus 274 ~~a~~~~~~~~~-~i--~g~~~-------~~--~~~-----~~---------------~---~--------~~~~~a~~~ 310 (404)
+.. .+..... .+ ...+. .. ..+ .. + . ......+++
T Consensus 203 ~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 280 (378)
T PRK06816 203 PRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLE 280 (378)
T ss_pred CCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHH
Confidence 421 1110000 00 00000 00 000 00 0 0 011567888
Q ss_pred HHHHcCCCCCCcceEeecccchHHHHHHHHHh-----CCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCcee
Q 015576 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLL-----GLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (404)
Q Consensus 311 al~~agl~~~dId~~~~hd~~~~~~~~~~e~l-----g~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~g 385 (404)
+|+++|++++|||++.+|+.+..+...+.+.| |++++++..+ ..-+||+..|+-...+.+++++-+-++|++.
T Consensus 281 ~L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~~--~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~v 358 (378)
T PRK06816 281 LVDKRNLDPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFTN--LATVGNTGSASIYIMLDELLNSGRLKPGQKI 358 (378)
T ss_pred HHHHcCCChhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEEe--ccccccccchHHHHHHHHHHHcCCCCCCCEE
Confidence 99999999999999999999999999999987 8988775433 3568999999988888877765555667776
Q ss_pred EEeeecccc-ceeeeEEE
Q 015576 386 VGGICNGGG-GASALVLE 402 (404)
Q Consensus 386 l~~~~~~gG-~~~a~ll~ 402 (404)
+.....+|+ ....++|.
T Consensus 359 l~~~~~s~~~~~~~~~~~ 376 (378)
T PRK06816 359 LCFVPESGRFSTAFMLLT 376 (378)
T ss_pred EEEEecccchhheeEEEE
Confidence 554344443 23344543
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=195.61 Aligned_cols=253 Identities=20% Similarity=0.078 Sum_probs=185.3
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEec-cCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCc
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~-~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas 101 (404)
+.+.+++-..++++..+|+.+|+++||+++|+++++||.++++++ .+++..+..+.+++..+|++ +.++++++.+|++
T Consensus 39 ~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~~C~~ 117 (339)
T PRK06840 39 FGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMAVCAS 117 (339)
T ss_pred cCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-CcccccccccchH
Confidence 344433334556899999999999999999999999999986543 44444566788999999997 6789999999999
Q ss_pred HHHHHHHHHHHHHc-CCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcC
Q 015576 102 GMKAVMLAAQSIQL-GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180 (404)
Q Consensus 102 ~~~al~~A~~~I~a-G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg 180 (404)
++.+|..|..+|++ |.++.+||++.|..+..- ..
T Consensus 118 ~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~--~~------------------------------------------- 152 (339)
T PRK06840 118 FPIALKVAKDLLYSDPSIENVLLVGGYRNSDLV--DY------------------------------------------- 152 (339)
T ss_pred HHHHHHHHHHHHhcCCCccEEEEEeeccccccc--Cc-------------------------------------------
Confidence 99999999999999 999999999999876410 00
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCc
Q 015576 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASI 260 (404)
Q Consensus 181 ~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 260 (404)
.++ ....+ -.
T Consensus 153 ---------------------------------------------~~~--------------------~~~~~-----~~ 162 (339)
T PRK06840 153 ---------------------------------------------DNP--------------------RTRFM-----FN 162 (339)
T ss_pred ---------------------------------------------CCC--------------------Ceeee-----cc
Confidence 000 00011 01
Q ss_pred cccccceeeecCHHHHHHcCCCceEEEEeeEEeccC---------------C------------------Cccc------
Q 015576 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA---------------P------------------EWFT------ 301 (404)
Q Consensus 261 ~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~---------------~------------------~~~~------ 301 (404)
+||||+|+||+.++. .. +|.+....++. | ..+.
T Consensus 163 ~GDgAaA~ll~~~~~----~~----~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (339)
T PRK06840 163 FAAGGSAALLKKDAG----KN----RILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEV 234 (339)
T ss_pred CCCceeEEEEEecCC----CC----ceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhh
Confidence 699999999986532 11 12221111100 0 0000
Q ss_pred --cchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHh
Q 015576 302 --TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (404)
Q Consensus 302 --~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~ 379 (404)
....++++++|+++|++++|||++.+|+.+......+.+.||++++++. . ..-+||+.+++-...+.+++.+-+.
T Consensus 235 ~~~~~~~~i~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~~-~--~~~~Gn~~sas~~~~L~~~~~~~~~ 311 (339)
T PRK06840 235 SIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLTEEQAI-Y--LDEYGHLGQLDQILSLHLALEQGKL 311 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCcCHHHHHHHHHHcCCCHHHeE-e--HHhccchhhhhHHHHHHHHHHcCCC
Confidence 0124788999999999999999999999998888889999999987764 2 4568999888877777776654344
Q ss_pred cCCceeEEeeeccccceeeeEEE
Q 015576 380 KKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 380 ~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
++|++.+...++.|....++||+
T Consensus 312 ~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 312 KDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred CCCCEEEEEEEehhhheeEEEEE
Confidence 57888888878777788888887
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.88 E-value=8e-22 Score=190.61 Aligned_cols=256 Identities=21% Similarity=0.200 Sum_probs=188.4
Q ss_pred EeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcc
Q 015576 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK 97 (404)
Q Consensus 18 vg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~ 97 (404)
+|+.+..|... +++..+|+.+|++++|+++|+++++||.+++++..+....+..+.+++..+|++ +.++++++.
T Consensus 34 ~gi~~r~~~~~-----~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~~ 107 (324)
T cd00827 34 TGIGQRHMAGD-----DEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLKQ 107 (324)
T ss_pred eecceeEecCC-----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehhh
Confidence 56666666443 578999999999999999999999999999999887665667889999999997 789999999
Q ss_pred cCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHH
Q 015576 98 VCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICAN 177 (404)
Q Consensus 98 aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 177 (404)
+|+|++.+|..|..+|++|.++++||+++|.++..+. .
T Consensus 108 ~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~-~----------------------------------------- 145 (324)
T cd00827 108 ACYGGTAALQLAANLVESGPWRYALVVASDIASYLLD-E----------------------------------------- 145 (324)
T ss_pred hhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhccc-C-----------------------------------------
Confidence 9999999999999999999999999999999876221 0
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCC
Q 015576 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGN 257 (404)
Q Consensus 178 ~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 257 (404)
.+ ..+++
T Consensus 146 --------------------------------------------------~~-------------------~~~~~---- 152 (324)
T cd00827 146 --------------------------------------------------GS-------------------ALEPT---- 152 (324)
T ss_pred --------------------------------------------------CC-------------------Ccccc----
Confidence 00 11233
Q ss_pred CCccccccceeeecCHHHHHHcCCCceEE--------------EEeeEEec-----------cCC---Cc---cccchHH
Q 015576 258 ASIISDGAAALVLVSGVKALELGLQVIAK--------------IRGFADAA-----------QAP---EW---FTTAPSL 306 (404)
Q Consensus 258 ~~~~~DGAaA~vL~~~~~a~~~~~~~~~~--------------i~g~~~~~-----------~~~---~~---~~~~~~~ 306 (404)
+||||+|+||++.+... ....+.. ..+..... .+. .. .......
T Consensus 153 ---~gdgaaA~ll~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (324)
T cd00827 153 ---LGDGAAAMLVSRNPGIL--AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAK 227 (324)
T ss_pred ---ccCceEEEEEecCcccc--cCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHH
Confidence 79999999998765310 0011000 01110000 000 00 0112357
Q ss_pred HHHHHHHHcCCCCCCcceEeecccch-HHHHHHHHHhCCCCCCcCCCC--CccccCCcccchHHHHHHHHHHHHHhcCCc
Q 015576 307 AIPKAIANAGLEASQIDYYEINEAFS-VVAIANQKLLGLDPEQVNAHG--GAVSLGHPLGCSGARILVTLLGVLRHKKGK 383 (404)
Q Consensus 307 a~~~al~~agl~~~dId~~~~hd~~~-~~~~~~~e~lg~~~~~vn~~G--g~~~~Gh~~gasG~~~l~~~~~~l~~~~~~ 383 (404)
+++++|++.|++ +|||++.+|+.+. .....+.+.|+++.+++..+- -..-+||+.+++-...+.+++.+-+.++|+
T Consensus 228 ~~~~~l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd 306 (324)
T cd00827 228 VVRKALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGD 306 (324)
T ss_pred HHHHHHHHcccc-cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCC
Confidence 889999999999 9999999999999 888888999999877666542 246689998888888887777665555677
Q ss_pred eeEEeeeccccceeeeE
Q 015576 384 YGVGGICNGGGGASALV 400 (404)
Q Consensus 384 ~gl~~~~~~gG~~~a~l 400 (404)
+.+...++.|....+++
T Consensus 307 ~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 307 RVLLFSYGSGFTAEAFV 323 (324)
T ss_pred EEEEEEeccchhheecc
Confidence 77776665555554443
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.3e-22 Score=194.67 Aligned_cols=250 Identities=20% Similarity=0.154 Sum_probs=181.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc-ccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~-~aCas~~~al~~A~~~I~ 114 (404)
...+|+.+|+++||+++|+++++||.+|++++++ +..|..+..++..||+++++++++++ .+|++++.||..|..+++
T Consensus 84 ~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~ 162 (361)
T cd00831 84 EARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLE 162 (361)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHH
Confidence 6899999999999999999999999999998876 55777889999999997668899998 899999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
+|..+.+||+++|..+..
T Consensus 163 ~~~~~~aLvv~~e~~s~~-------------------------------------------------------------- 180 (361)
T cd00831 163 ANPGARVLVVSTELCSLW-------------------------------------------------------------- 180 (361)
T ss_pred HCCCCEEEEEEeecccce--------------------------------------------------------------
Confidence 999999999999988751
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
++.++ + .-+....+.+||||+|+||++++
T Consensus 181 -------------------------------~~~~d-----~---------------~~~~~~~~lfGDgaaA~ll~~~~ 209 (361)
T cd00831 181 -------------------------------YRGPD-----H---------------RSMLVGNALFGDGAAAVLLSNDP 209 (361)
T ss_pred -------------------------------eCCCC-----c---------------HHHhhhhhhccCCceEEEEEcCC
Confidence 00000 0 00000122279999999999765
Q ss_pred HHHHcCCCceEEEEeeEEec------------c--------CCC---ccccchHHHHHHHHHHc--CCCCCCcceEeecc
Q 015576 275 KALELGLQVIAKIRGFADAA------------Q--------APE---WFTTAPSLAIPKAIANA--GLEASQIDYYEINE 329 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~------------~--------~~~---~~~~~~~~a~~~al~~a--gl~~~dId~~~~hd 329 (404)
..... ..+...+.+..... . ++. .......++++++|+++ |++++|||++.+|+
T Consensus 210 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~ 288 (361)
T cd00831 210 RDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHP 288 (361)
T ss_pred Ccccc-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEEECC
Confidence 32100 00111222111100 0 000 00112356889999999 99999999999999
Q ss_pred cchHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeE
Q 015576 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400 (404)
Q Consensus 330 ~~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~l 400 (404)
.+..+...+.+.||++++++..+ --...+||+.+++-...+.+++++-+.++|++.+...++.|-...++|
T Consensus 289 ~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l 360 (361)
T cd00831 289 GGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAV 360 (361)
T ss_pred CChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeee
Confidence 99999999999999998876321 113568999999988888777765554567777776665544555544
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.3e-21 Score=187.87 Aligned_cols=215 Identities=23% Similarity=0.297 Sum_probs=161.8
Q ss_pred HHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccc
Q 015576 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGML 155 (404)
Q Consensus 76 ~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~ 155 (404)
++.+++..+|+ ++|+++++.+|+|++.||..|+.+|++|++|+|||+|+|..+. .....
T Consensus 139 ~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~--~~~~~----------------- 197 (392)
T PRK09185 139 LADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCR--LTLNG----------------- 197 (392)
T ss_pred HHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccCh--HHHHH-----------------
Confidence 56789999999 4799999999999999999999999999999999999996542 11000
Q ss_pred ccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccC
Q 015576 156 KDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKF 235 (404)
Q Consensus 156 ~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~ 235 (404)
+. .. +. .....++| |+.+
T Consensus 198 ------------~~--------~~------------------------~~---------l~~~~~~P---fd~~------ 215 (392)
T PRK09185 198 ------------FN--------SL------------------------ES---------LSPQPCRP---FSAN------ 215 (392)
T ss_pred ------------HH--------hc------------------------cc---------cCCCccCC---CcCC------
Confidence 00 00 00 00123445 6655
Q ss_pred CHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc-----cccchHHHHHH
Q 015576 236 DAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPK 310 (404)
Q Consensus 236 ~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~ 310 (404)
++|++ ++||++++||++++ + . .++|.|++...+.... ...+..+++++
T Consensus 216 -------------~~G~~-------~gEGaa~vVLe~~~-----~-~-~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~ 268 (392)
T PRK09185 216 -------------RDGIN-------IGEAAAFFLLERED-----D-A-AVALLGVGESSDAHHMSAPHPEGLGAILAMQQ 268 (392)
T ss_pred -------------CCccc-------eeceEEEEEEEEcC-----C-C-cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 67777 79999999999861 1 2 2689999988764322 22344689999
Q ss_pred HHHHcCCCCCCcceEeecccchHH----HH-HHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----
Q 015576 311 AIANAGLEASQIDYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---- 381 (404)
Q Consensus 311 al~~agl~~~dId~~~~hd~~~~~----~~-~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---- 381 (404)
+|+++|++++|||+++.|...+.. +. .+.+.+|- +++++..|..+||+.+|+|+..++.++++|+++-
T Consensus 269 Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~---~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~ 345 (392)
T PRK09185 269 ALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD---GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHG 345 (392)
T ss_pred HHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC---CCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999988752 22 33344552 3456777888999999999999999999998751
Q ss_pred -----------------------CceeEEeeeccccceeeeEEEe
Q 015576 382 -----------------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 -----------------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+...++.||.+.++||++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 346 WNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred CCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 2466888899999999999985
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-22 Score=193.88 Aligned_cols=256 Identities=13% Similarity=0.088 Sum_probs=180.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc-ceeeEcccCCcHHHHHHHHHHH
Q 015576 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQS 112 (404)
Q Consensus 34 ~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~-~~~~v~~aCas~~~al~~A~~~ 112 (404)
++...+|+.+|+++||+++|+++++||.||++++. ++..|..+..++..||+++.. .+++++.+|++++.+|..|..+
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~ 181 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDI 181 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHH
Confidence 46778899999999999999999999999998874 556778899999999997554 3789999999999999999999
Q ss_pred HHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHH
Q 015576 113 IQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (404)
Q Consensus 113 I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~ 192 (404)
|++|..++|||+++|..+......
T Consensus 182 ~~~~~~~~vLvv~~e~~s~~~~~~-------------------------------------------------------- 205 (391)
T PLN03169 182 AENNPGSRVLLTTSETTILGFRPP-------------------------------------------------------- 205 (391)
T ss_pred HHhCCCCeEEEEEEEcChhhccCC--------------------------------------------------------
Confidence 999999999999999876411000
Q ss_pred HHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecC
Q 015576 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (404)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~ 272 (404)
. . + . +-.+..++.+||||+|+||..
T Consensus 206 ---------~-----------------------~--~-------------------~--~~d~~~~~lFGDGAaA~vl~~ 230 (391)
T PLN03169 206 ---------S-----------------------P--D-------------------R--PYDLVGAALFGDGAAAVIIGA 230 (391)
T ss_pred ---------C-----------------------c--c-------------------c--hhhhhhhhhccCceEEEEEec
Confidence 0 0 0 0 000012334899999999986
Q ss_pred HHHHHHcCCCceEEEEeeEEecc----C----------------C---CccccchHHHHHHHHHHcCCCCCCcc--eEee
Q 015576 273 GVKALELGLQVIAKIRGFADAAQ----A----------------P---EWFTTAPSLAIPKAIANAGLEASQID--YYEI 327 (404)
Q Consensus 273 ~~~a~~~~~~~~~~i~g~~~~~~----~----------------~---~~~~~~~~~a~~~al~~agl~~~dId--~~~~ 327 (404)
++... ...++..+...+.... . . ........+.++++|+++|++++||| ++.+
T Consensus 231 ~~~~~--~~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~ 308 (391)
T PLN03169 231 DPIPV--SESPFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAV 308 (391)
T ss_pred CCCcc--cCCcceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEe
Confidence 54210 0011112222221100 0 0 00001124678999999999999999 8999
Q ss_pred cccchHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhc---CCceeEEeeeccccceeeeEEEe
Q 015576 328 NEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHK---KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 328 hd~~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~---~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
|+.+..+.....+.||++++++..+ --...+||+.++|-...|.++...-+.+ ++++++...++.|=.+.++||++
T Consensus 309 Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 309 HPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhHHHHHHhh
Confidence 9999999999999999998876421 1134689998888666666665443322 46777777666655666677764
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=193.70 Aligned_cols=253 Identities=19% Similarity=0.130 Sum_probs=178.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc-ceeeEcccCCcHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~-~~~~v~~aCas~~~al~~A~~~I 113 (404)
++..+|+.+|+++||+++|+++++||.||++++++.+ -|..+.+++..||++... ..+.+..+|++++.+|..|..+|
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li 184 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLA 184 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHH
Confidence 3788999999999999999999999999999999876 678899999999997533 25677779999999999999999
Q ss_pred HcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015576 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~ 193 (404)
++|.+++|||+++|..|..-..
T Consensus 185 ~~~~~~~vLVv~~e~~s~~~~~---------------------------------------------------------- 206 (399)
T PLN03171 185 ENNRGARVLVVAAEITLLLFNG---------------------------------------------------------- 206 (399)
T ss_pred HhCCCCeEEEEEEeccccccCC----------------------------------------------------------
Confidence 9999999999999998761000
Q ss_pred HHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCH
Q 015576 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (404)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~ 273 (404)
.| ++.+-+....+++||||+|+||+..
T Consensus 207 ----------------------------------~d-------------------~~~~~~~v~~~LFGDGAaA~vl~~~ 233 (399)
T PLN03171 207 ----------------------------------PD-------------------EGCFQTLLNQGLFGDGAAAVIVGAD 233 (399)
T ss_pred ----------------------------------CC-------------------cccHHhhhccccccCccEEEEEecC
Confidence 00 0000001123348999999999875
Q ss_pred HHHHHcCCCceEEEEeeEEeccCCC---------------ccc-cch----HHHHHHHHHH---------cCCCCCCcce
Q 015576 274 VKALELGLQVIAKIRGFADAAQAPE---------------WFT-TAP----SLAIPKAIAN---------AGLEASQIDY 324 (404)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~~~---------------~~~-~~~----~~a~~~al~~---------agl~~~dId~ 324 (404)
+... .++..++........... .+. ... .+.+++++++ +|++++||++
T Consensus 234 ~~~~---~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~ 310 (399)
T PLN03171 234 ADAA---ERPLFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFW 310 (399)
T ss_pred CCCC---CCCceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceE
Confidence 3211 112223443332211000 001 111 2333555554 5888999998
Q ss_pred EeecccchHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHh--cCC---ceeEEeeeccccceee
Q 015576 325 YEINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRH--KKG---KYGVGGICNGGGGASA 398 (404)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~--~~~---~~gl~~~~~~gG~~~a 398 (404)
+ +|+.+..+...+.+.||++++++..+ -....+||+.++|-...|.+++.+.+. +.| ++.+...++.|-.+.+
T Consensus 311 ~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~~~ 389 (399)
T PLN03171 311 A-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTVDA 389 (399)
T ss_pred E-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHHHH
Confidence 8 79999999999999999999877421 113568999999988888888777642 344 6777776666556677
Q ss_pred eEEEe
Q 015576 399 LVLEL 403 (404)
Q Consensus 399 ~ll~~ 403 (404)
+||+.
T Consensus 390 ~ll~~ 394 (399)
T PLN03171 390 MLLHA 394 (399)
T ss_pred HHhhc
Confidence 77763
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-21 Score=187.80 Aligned_cols=253 Identities=16% Similarity=0.123 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc-eeeEcccCCcHHHHHHHHHHHHHc
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~-~~~v~~aCas~~~al~~A~~~I~a 115 (404)
..+|+.+|+++||+++|+++++||.+|++++++.. -|..+.+++..||+++... .+.++.+|++++.+|..|..++++
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~ 180 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHc
Confidence 44799999999999999999999999999988744 6778999999999986553 468899999999999999999999
Q ss_pred CCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 015576 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (404)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~ 195 (404)
+..++|||+++|.+|.... .
T Consensus 181 ~~~~~vLVV~~E~~S~~~~-~----------------------------------------------------------- 200 (393)
T PLN03172 181 NAGSRVLVVCSEITAVTFR-G----------------------------------------------------------- 200 (393)
T ss_pred CCCCeEEEEEEehhhhhhc-c-----------------------------------------------------------
Confidence 9999999999999874100 0
Q ss_pred HHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHH
Q 015576 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (404)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~ 275 (404)
.++ .+.+ ++..+++|||||+|+||+..+.
T Consensus 201 --------------------------------~~d----~~~~---------------~~v~~~LFGDGAaAvVl~~~~~ 229 (393)
T PLN03172 201 --------------------------------PSD----THLD---------------SLVGQALFGDGAAAVIIGADPD 229 (393)
T ss_pred --------------------------------ccc----ccHH---------------hhhccchhcCceEEEEEecCCC
Confidence 000 0000 0012344899999999987432
Q ss_pred HHHcCCCceEEEEeeEEec----cC-------------------CCccccchHHHHHHHHHHcCCCCCCcceEeecccch
Q 015576 276 ALELGLQVIAKIRGFADAA----QA-------------------PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFS 332 (404)
Q Consensus 276 a~~~~~~~~~~i~g~~~~~----~~-------------------~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~ 332 (404)
.. . .++.-++.++.... ++ +........+.++++|++.|++..|||++.+|+.+.
T Consensus 230 ~~-~-~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~ 307 (393)
T PLN03172 230 TK-I-ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGP 307 (393)
T ss_pred Cc-c-cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcH
Confidence 11 0 12222444443211 00 000011224678889999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHH-HHhc---CC---ceeEEeeeccccceeeeEEEe
Q 015576 333 VVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGV-LRHK---KG---KYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 333 ~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~-l~~~---~~---~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.+...+.+.||++++++..+ -.+..+||+.++|-...|-++.++ ++.+ .| ++++...++.|=+.-++||++
T Consensus 308 ~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 386 (393)
T PLN03172 308 AILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHS 386 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEe
Confidence 99999999999998876432 224567898887766666555432 1211 12 577877776666778888875
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-21 Score=189.04 Aligned_cols=253 Identities=14% Similarity=0.088 Sum_probs=179.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc-ceeeEcccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~-~~~~v~~aCas~~~al~~A~~~I~ 114 (404)
...+|+.+|+++||+++|+++++||.||++++++.. -|..+.+++..||+++.. .+++++.+|++++.+|..|..+++
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~ 178 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN-MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAE 178 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC-CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHH
Confidence 466899999999999999999999999999999844 688999999999997543 389999999999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
+|..++|||+++|.+|.... .
T Consensus 179 ~~~~~~VLVV~~E~~S~~~~-~---------------------------------------------------------- 199 (389)
T PLN03168 179 NNKGARVLAVASEVTAVTYR-A---------------------------------------------------------- 199 (389)
T ss_pred hCCCCEEEEEEEehhhhhcc-C----------------------------------------------------------
Confidence 99999999999999875100 0
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
++ .+..-++..++++||||+|+||+..+
T Consensus 200 ---------------------------------~~-------------------~~~~~~~~~~~LFGDGAaAvvl~~~~ 227 (389)
T PLN03168 200 ---------------------------------PS-------------------ENHLDGLVGSALFGDGAGVYVVGSDP 227 (389)
T ss_pred ---------------------------------cc-------------------cccHHHHhccccccCccEEEEEecCC
Confidence 00 00000011344589999999998753
Q ss_pred HHHHcCCCceEEEEeeEEec----cC--CC-----------------ccccchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 275 KALELGLQVIAKIRGFADAA----QA--PE-----------------WFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~----~~--~~-----------------~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
... . .+++..+....... ++ .. .........++++++..|+...|++++.+|+.+
T Consensus 228 ~~~-~-~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg 305 (389)
T PLN03168 228 KPE-V-EKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGG 305 (389)
T ss_pred CCc-c-CCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEecCCc
Confidence 211 0 01212333221110 00 00 000112456777788888888888999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhcC--------CceeEEeeeccccceeeeEEE
Q 015576 332 SVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKK--------GKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--------~~~gl~~~~~~gG~~~a~ll~ 402 (404)
..+.....+.||++++++..+ ..+.-+||+.++|-...|-++.++ +.+. +++++..+++.|=.+-++||+
T Consensus 306 ~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr 384 (389)
T PLN03168 306 PAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLR 384 (389)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhhhhhhhhe
Confidence 999999999999998876432 124568999888877777666544 2222 257777766665567777777
Q ss_pred e
Q 015576 403 L 403 (404)
Q Consensus 403 ~ 403 (404)
.
T Consensus 385 ~ 385 (389)
T PLN03168 385 A 385 (389)
T ss_pred e
Confidence 4
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-21 Score=189.86 Aligned_cols=254 Identities=15% Similarity=0.103 Sum_probs=178.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc-ceeeEcccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~-~~~~v~~aCas~~~al~~A~~~I~ 114 (404)
...+|+.+|+++||+++|+++++||.+|++++++.. .|..+.+++..||+++.. .+++++.+|++++.+|..|..+++
T Consensus 105 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~ 183 (401)
T PLN03170 105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE 183 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC-CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence 345699999999999999999999999998887743 677899999999997544 378999999999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
++..++|||+++|.+|.... .
T Consensus 184 ~~~~~~vLVV~~E~~S~~~~-~---------------------------------------------------------- 204 (401)
T PLN03170 184 NNRGARVLVVCSEITAVTFR-G---------------------------------------------------------- 204 (401)
T ss_pred cCCCCeEEEEEEehhhhccC-C----------------------------------------------------------
Confidence 99999999999999875110 0
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
+++. +.+ .+..++++||||+|+||+.++
T Consensus 205 ---------------------------------~~~~----~~~---------------~~~~~~LFGDGAaAvVl~~~~ 232 (401)
T PLN03170 205 ---------------------------------PSES----HLD---------------SMVGQALFGDGAAAVIVGADP 232 (401)
T ss_pred ---------------------------------cccc----hhh---------------hhhhhhhhhceeEEEEEecCC
Confidence 0000 000 001233489999999998753
Q ss_pred HHHHcCCCceEEEEeeEEecc--------------CC---------CccccchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 275 KALELGLQVIAKIRGFADAAQ--------------AP---------EWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~--------------~~---------~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
... . ..+..++...+.... +. ........+.++++|+++|++.+|||++.+|+.+
T Consensus 233 ~~~-~-~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg 310 (401)
T PLN03170 233 DER-V-ERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGG 310 (401)
T ss_pred ccc-c-cCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCc
Confidence 211 0 112123333221110 00 0001122468899999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHh-c---CC---ceeEEeeeccccceeeeEEEe
Q 015576 332 SVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRH-K---KG---KYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~-~---~~---~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..+...+.+.||++++++..+ --..-+||+.++|-...|-++.++... + .| ++++...++.|=+..++||++
T Consensus 311 ~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 311 PAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHhee
Confidence 999999999999998876321 123567999888866666665532211 1 23 567777666655677777775
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.9e-20 Score=200.50 Aligned_cols=264 Identities=26% Similarity=0.283 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCCCCC-------------------cHHHHHHHHCCCCCCcceee
Q 015576 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANLGQ-------------------APARQAALGAGIPNSVVCTT 94 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~~~~-------------------~~a~~i~~~lGl~~~~~~~~ 94 (404)
..|..+.+.+||||||++++.+. +|++|....++... ..+.+++..+++ ++|.+.
T Consensus 92 qRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~ 169 (1061)
T COG3321 92 QRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVT 169 (1061)
T ss_pred HhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCcc
Confidence 33999999999999999998887 57777776655221 256789999999 689999
Q ss_pred EcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHH
Q 015576 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (404)
Q Consensus 95 v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (404)
|+++|+|++.|++.|+..|++|++|.+|++|+..... |..... + ...
T Consensus 170 vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~-p~~~~~------~--------------------~~~------ 216 (1061)
T COG3321 170 VDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLS-PESSYL------F--------------------SAG------ 216 (1061)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccC-Ccceee------e--------------------ecc------
Confidence 9999999999999999999999999999999998766 321100 0 000
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccc
Q 015576 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (404)
Q Consensus 175 ~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~ 254 (404)
+ .-.+++.|++ ||.+ .+|++
T Consensus 217 -----------------------------g--------~ls~~g~c~~---fd~~-------------------adG~v- 236 (1061)
T COG3321 217 -----------------------------G--------MLSPDGRCKA---FDAD-------------------ADGYV- 236 (1061)
T ss_pred -----------------------------c--------CcCCCCccee---cccC-------------------CCCEE-
Confidence 0 0113566766 7777 88999
Q ss_pred cCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc-----ccchHHHHHHHHHHcCCCCCCcceEeecc
Q 015576 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTAPSLAIPKAIANAGLEASQIDYYEINE 329 (404)
Q Consensus 255 ~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~agl~~~dId~~~~hd 329 (404)
.++|++++||...+.|.+.++++++.|.|++.++++...- ..+....++++|+++|++|++|+|+|.|.
T Consensus 237 ------~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHg 310 (1061)
T COG3321 237 ------RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHG 310 (1061)
T ss_pred ------EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecC
Confidence 5999999999999999999999999999999998863321 23457899999999999999999999997
Q ss_pred cchHH-----HHHHHHHhCCC--CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC---------------------
Q 015576 330 AFSVV-----AIANQKLLGLD--PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------------------- 381 (404)
Q Consensus 330 ~~~~~-----~~~~~e~lg~~--~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--------------------- 381 (404)
..+.. ...+...++-. ..+.-..+-|.++||+..|+|+..+++.+++|+++-
T Consensus 311 TGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~ 390 (1061)
T COG3321 311 TGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPF 390 (1061)
T ss_pred CCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCe
Confidence 66643 12223334322 446777888999999999999999999999999871
Q ss_pred --------------CceeEEeeeccccceeeeEEE
Q 015576 382 --------------GKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 382 --------------~~~gl~~~~~~gG~~~a~ll~ 402 (404)
.++.=+..++.||.+.=+|||
T Consensus 391 ~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlE 425 (1061)
T COG3321 391 VVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILE 425 (1061)
T ss_pred EeecCCcCCCCCCCCceeeeeccCCCCCceEEEEe
Confidence 134446678888888888886
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.4e-21 Score=187.35 Aligned_cols=252 Identities=17% Similarity=0.120 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc-ceeeEcccCCcHHHHHHHHHHHHHc
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~-~~~~v~~aCas~~~al~~A~~~I~a 115 (404)
..+|+.+|+++||+++|+++++||.+|++++++.. .|..+.+++..||+++.. ..+.++.+|++++.+|..|..++++
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~ 180 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHh
Confidence 45799999999999999999999999999988744 577889999999997544 3678899999999999999999999
Q ss_pred CCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 015576 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (404)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~ 195 (404)
+..++|||+++|.+|... ..
T Consensus 181 ~~~~~vLVV~~E~~S~~~-~~----------------------------------------------------------- 200 (391)
T PLN03173 181 NKGARVLVVCSEITAVTF-RG----------------------------------------------------------- 200 (391)
T ss_pred CCCCeEEEEEEehhhhhh-CC-----------------------------------------------------------
Confidence 999999999999987410 00
Q ss_pred HHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHH
Q 015576 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (404)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~ 275 (404)
| -|.+ .-.+..++++||||+|+||+.++.
T Consensus 201 ----------------~-------------~d~~----------------------~~~~v~~~LFGDGAaAvvl~~~~~ 229 (391)
T PLN03173 201 ----------------P-------------SDTH----------------------LDSLVGQALFGDGAAAIIIGSDPV 229 (391)
T ss_pred ----------------c-------------cccc----------------------hhhhhhhhhhcCceEEEEEeCCCC
Confidence 0 0000 000012344899999999987432
Q ss_pred HHHcCCCceEEEEeeEEe----cc----------C---------CCccccchHHHHHHHHHHcCCCCCCcceEeecccch
Q 015576 276 ALELGLQVIAKIRGFADA----AQ----------A---------PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFS 332 (404)
Q Consensus 276 a~~~~~~~~~~i~g~~~~----~~----------~---------~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~ 332 (404)
. .. .++.-++.++... ++ + +........+.++++|+++|++.+|||++.+|+.+.
T Consensus 230 ~-~~-~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~ 307 (391)
T PLN03173 230 L-GV-EKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGP 307 (391)
T ss_pred C-Cc-CCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEECCCcH
Confidence 1 00 1111233332211 00 0 000011235688999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhc------C-CceeEEeeeccccceeeeEEE
Q 015576 333 VVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHK------K-GKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 333 ~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~------~-~~~gl~~~~~~gG~~~a~ll~ 402 (404)
.+...+.+.||++++++..+ -...-+||+.++|-...|-++.++-..+ . +++++..+++.|=..-.+||+
T Consensus 308 ~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~ 385 (391)
T PLN03173 308 AILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLH 385 (391)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHh
Confidence 99999999999998876432 1235579998888666666665421111 1 256676655443344444444
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=180.05 Aligned_cols=251 Identities=16% Similarity=0.092 Sum_probs=174.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc-ccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~-~aCas~~~al~~A~~~I~ 114 (404)
..+.....|+.++|+++|++|+|||.+|+. +++...-|..+.+++..+|++.++.+++++ .+|++++.+|..|.++++
T Consensus 187 ea~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 187 EAEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHH
Confidence 344567778889999999999999999985 556666788999999999998788999998 899999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
++..+++||+++|.+|. ..+.
T Consensus 266 ~~~~~~aLVVstE~~S~-~~y~---------------------------------------------------------- 286 (521)
T PLN02854 266 ANPNSYAVVVSTENITL-NWYF---------------------------------------------------------- 286 (521)
T ss_pred hCCCCeEEEEEEeeeec-CCCC----------------------------------------------------------
Confidence 99999999999999873 1000
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
..| .-++..+++++|||+|+||++.+
T Consensus 287 --------------------------------g~D----------------------rs~lv~~~LFgDGAAAvlLs~~~ 312 (521)
T PLN02854 287 --------------------------------GND----------------------RSMLLCNCIFRMGGAAVLLSNKA 312 (521)
T ss_pred --------------------------------CCc----------------------hhhhcceeeeccceeEEEEeccc
Confidence 000 11112345699999999998743
Q ss_pred HHHHc-CCCceEEEEeeEEeccC---------------------CCccc---c---------c------------hHHHH
Q 015576 275 KALEL-GLQVIAKIRGFADAAQA---------------------PEWFT---T---------A------------PSLAI 308 (404)
Q Consensus 275 ~a~~~-~~~~~~~i~g~~~~~~~---------------------~~~~~---~---------~------------~~~a~ 308 (404)
..+.. ..+ +..+...-..+++ .+.+. . + ....+
T Consensus 313 ~~~~~~k~~-L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i 391 (521)
T PLN02854 313 RDRKRSKYQ-LVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLV 391 (521)
T ss_pred ccccccchh-eeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHH
Confidence 11100 000 0111111111100 00000 0 0 13457
Q ss_pred HHHHHHcCCCC------CCcceEeecccchHHHHHHHHHhCCCC---CCcCCCCCccccCCcccchHHHHHHHHHHHHHh
Q 015576 309 PKAIANAGLEA------SQIDYYEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (404)
Q Consensus 309 ~~al~~agl~~------~dId~~~~hd~~~~~~~~~~e~lg~~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~ 379 (404)
++.|.++|+++ +|||+|.+|+.+..+...+.+.||+++ ++...+ +.-+||+.++|-...+.++...-+-
T Consensus 392 ~~~L~~~gl~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~t--L~rfGNTSSASI~~~L~~~~~kGri 469 (521)
T PLN02854 392 RRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMT--LHRFGNTSSSSLWYELAYTEAKGRV 469 (521)
T ss_pred HHHHHHcCCCccCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHH--hhhcCChHhhHHHHHHHHHHHcCCC
Confidence 78888999987 699999999999999999999999984 333222 3557888777766666666554444
Q ss_pred cCCceeEEeeeccccceeeeEEEe
Q 015576 380 KKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 380 ~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
++|++.+..+++.|=...++|+|.
T Consensus 470 k~GD~Vl~iaFGsGft~~sav~~~ 493 (521)
T PLN02854 470 SAGDRVWQIAFGSGFKCNSAVWKA 493 (521)
T ss_pred CCCCEEEEEEEchhhhhhheeeEE
Confidence 567777776666655667777774
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.1e-19 Score=176.88 Aligned_cols=96 Identities=19% Similarity=0.160 Sum_probs=88.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc-ccCCcHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~-~aCas~~~al~~A~~~I 113 (404)
+...+++..|+++||+++|++|+|||.+|+ ++++....|..+.+++..+|+++++.+++++ .+|++++.+|..|.+++
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHH
Confidence 457789999999999999999999999988 6777767888999999999998788999999 69999999999999999
Q ss_pred HcCCCCeEEEeccccccC
Q 015576 114 QLGINDIVVAGGMESMSN 131 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~ 131 (404)
+++...+|||+++|.+|.
T Consensus 249 ~~~~~~~aLVVstE~~S~ 266 (502)
T PLN02377 249 QVHRNTYAVVVSTENITQ 266 (502)
T ss_pred HcCCCCEEEEEEEecccc
Confidence 999999999999999875
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.4e-19 Score=172.96 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=97.2
Q ss_pred eEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceee
Q 015576 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT 94 (404)
Q Consensus 15 v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~ 94 (404)
.++.|.+++.+.... ++++..+|+.+|+++||+++ ++++||.+++++.++....+..+..++..||+++++++++
T Consensus 30 ~~~~g~G~~~~~~~~---~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~d 104 (379)
T TIGR01835 30 KFHIGIGQKKMAVPP---IDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFE 104 (379)
T ss_pred HHHhhcCceEEeeCC---CCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEE
Confidence 456677777765432 35788999999999999998 8999999999999988766789999999999976789999
Q ss_pred EcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccc
Q 015576 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESM 129 (404)
Q Consensus 95 v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~ 129 (404)
+.++|.+++.||..|..+|++|..+.+||+++|..
T Consensus 105 v~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a 139 (379)
T TIGR01835 105 LKQACYGATAALQMAKGHVALSPDRKVLVIASDIA 139 (379)
T ss_pred eccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehh
Confidence 99999999999999999999999999999999974
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.3e-19 Score=166.37 Aligned_cols=243 Identities=19% Similarity=0.169 Sum_probs=191.4
Q ss_pred EEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc
Q 015576 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN 96 (404)
Q Consensus 17 ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~ 96 (404)
..|.+++...-. -.+++...|+++|++++|+++++||.+|+.|++|+.++....-..+..++..||+++...++++.
T Consensus 34 ~~gl~~~e~sv~---~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~ 110 (377)
T COG3425 34 KKGLGVEEKSVP---PWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVE 110 (377)
T ss_pred hhccccccccCC---CCchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHH
Confidence 344455444322 23689999999999999999999999999999999998887778899999999999889999999
Q ss_pred ccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHH
Q 015576 97 KVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICA 176 (404)
Q Consensus 97 ~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 176 (404)
.+|-++..||+.|..+|.+|..+.+||++.|.....|...
T Consensus 111 ~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~~~---------------------------------------- 150 (377)
T COG3425 111 FACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPGDA---------------------------------------- 150 (377)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccCCCcc----------------------------------------
Confidence 9999999999999999999999999999999765422100
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccC
Q 015576 177 NKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAG 256 (404)
Q Consensus 177 ~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~ 256 (404)
.+ +.
T Consensus 151 -------------------------------------------------~E------------------------~t--- 154 (377)
T COG3425 151 -------------------------------------------------LE------------------------YT--- 154 (377)
T ss_pred -------------------------------------------------cC------------------------cc---
Confidence 00 11
Q ss_pred CCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccc--------------------cchHHHHHHHHHHcC
Q 015576 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT--------------------TAPSLAIPKAIANAG 316 (404)
Q Consensus 257 ~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~--------------------~~~~~a~~~al~~ag 316 (404)
-|+||+|+|+...+ ...+.+.+.++-+.+..++. .....+++..+++.|
T Consensus 155 ----~GAGavA~lIg~n~-------~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~g 223 (377)
T COG3425 155 ----AGAGAVAFLIGKNP-------PIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTG 223 (377)
T ss_pred ----CCCceEEEEEccCC-------CeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhC
Confidence 59999999998632 23344444444433211110 123678999999999
Q ss_pred CCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCcc-ccCCcccchHHHHHHHHHHHHHhcCCceeEEeee
Q 015576 317 LEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAV-SLGHPLGCSGARILVTLLGVLRHKKGKYGVGGIC 390 (404)
Q Consensus 317 l~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~-~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~ 390 (404)
++++|.|++.+|.+|+.+....++.+++..+++-++--.. .+|+++.+|....|+.++.+-. .+|++-+++..
T Consensus 224 ls~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SY 297 (377)
T COG3425 224 LSPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSY 297 (377)
T ss_pred CChhhhCeEEecCCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEee
Confidence 9999999999999999999999999999877776665444 6899999999999999988888 67777665533
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.3e-18 Score=158.91 Aligned_cols=235 Identities=23% Similarity=0.206 Sum_probs=162.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHH
Q 015576 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 34 ~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I 113 (404)
++...+|+.+|+++||+++|+++++||.+++|.... ....+..++..||+ |.++++.+|+|+..+|..|+.+|
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~---Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~lI 119 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN---QIITANFVARDLGI----PFLGLYGACSTSMETLALGAMLV 119 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC---cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHHH
Confidence 567788999999999999999999999999997432 23467889999987 56999999999999999999999
Q ss_pred HcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015576 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~ 193 (404)
++|.+|+|||++.|+.+++....+.
T Consensus 120 ~SG~ad~VLVV~Ssh~S~AErqfr~------------------------------------------------------- 144 (327)
T TIGR02845 120 DGGFADRVLAATSSHYATAERQFRY------------------------------------------------------- 144 (327)
T ss_pred hCCCCCEEEEEEecccchhhhhccc-------------------------------------------------------
Confidence 9999999999999999864321100
Q ss_pred HHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCH
Q 015576 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (404)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~ 273 (404)
|.+ .... +...+..++|||+|+||...
T Consensus 145 ------------------p~e--yg~q---------------------------------~~~ta~~tgdGAGA~vl~~~ 171 (327)
T TIGR02845 145 ------------------PTE--YGVQ---------------------------------KPPTAQWTVTGAGAVLLAST 171 (327)
T ss_pred ------------------ccc--cccC---------------------------------CCCeeeEEEcccEEEEEeec
Confidence 100 0000 11123337999999999865
Q ss_pred HHHHHcCCCceEEEEeeEEeccCCCccccch----HHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHH---HhCCCC
Q 015576 274 VKALELGLQVIAKIRGFADAAQAPEWFTTAP----SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK---LLGLDP 346 (404)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~----~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e---~lg~~~ 346 (404)
+...+...-...+|..++.. +|..++.+. ...+.+-|+..|.+|+|.|++.+-|....-..+..+ .-|++.
T Consensus 172 ~~~~~i~~~t~gkv~d~g~~--d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~ 249 (327)
T TIGR02845 172 GGGPRITSATIGKVVDYGIT--DPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKERGYDV 249 (327)
T ss_pred CCCCceEEEEEEEEEecCCC--CcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEecchHHHHHHHHHHHHHHcCCCh
Confidence 31111111112455555554 676666544 455777788999999999999988877654333333 335433
Q ss_pred C---------------CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeec
Q 015576 347 E---------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (404)
Q Consensus 347 ~---------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~ 391 (404)
. + ...||. --|+|....-..++.+|+.+..++-|+...+
T Consensus 250 ~~~~~dcg~~iy~~~~~-~~aggs-----gc~csa~v~~~~~~~~~~~g~~~r~l~v~tg 303 (327)
T TIGR02845 250 TERYDDCGVMIYRPDQQ-VFAGGS-----GCACSAVVTYGHILKEMLRGKLKKVLVVATG 303 (327)
T ss_pred hhccccCCeEEEcCCCc-ccCCCc-----ccchhHHHHHHHHHHHHhcCcceEEEEEEch
Confidence 2 2 222222 2356666677788899998888888765443
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=173.45 Aligned_cols=94 Identities=11% Similarity=0.117 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc-ccCCcHHHHHHHHHHHHHc
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~-~aCas~~~al~~A~~~I~a 115 (404)
..+|+.+|+++||+++|++|++||.+|+.++++. .-|..+.+++..+|+++++.+++++ .||++++.+|..|.+++++
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~ 226 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQV 226 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHc
Confidence 7789999999999999999999999999999886 6788999999999998788999999 8999999999999999999
Q ss_pred CCCCeEEEeccccccC
Q 015576 116 GINDIVVAGGMESMSN 131 (404)
Q Consensus 116 G~~~~vLv~g~e~~s~ 131 (404)
+...+|||+++|.+|.
T Consensus 227 ~~~~~aLVVstE~~S~ 242 (478)
T PLN02932 227 HRNTYALVVSTENITQ 242 (478)
T ss_pred CCCCeEEEEEEeeccc
Confidence 9999999999999886
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.2e-18 Score=168.76 Aligned_cols=95 Identities=18% Similarity=0.173 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc-ccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~-~aCas~~~al~~A~~~I~ 114 (404)
....+...|+++||+++|++|+|||.+|+.++ +....|..+..+...+|++.++.+++++ .+|++++.+|..|.++++
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~ 253 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHH
Confidence 35668999999999999999999999988744 5566788999999999998778999999 699999999999999999
Q ss_pred cCCCCeEEEeccccccC
Q 015576 115 LGINDIVVAGGMESMSN 131 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~ 131 (404)
++...++||+++|.+|.
T Consensus 254 a~~~~~aLVVstE~~S~ 270 (511)
T PLN02192 254 VHPNSYALVISMENITL 270 (511)
T ss_pred cCCCCeEEEEEEEeccc
Confidence 99999999999999883
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.8e-18 Score=157.15 Aligned_cols=242 Identities=21% Similarity=0.169 Sum_probs=162.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHH
Q 015576 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (404)
Q Consensus 33 ~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~ 112 (404)
.++...+|+.+|+++||+++|++++|||.+++|.... ....+..++..||+ |.++++.+|+|+..+|..|+.+
T Consensus 52 wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~---Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~l 124 (337)
T PRK08304 52 WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN---QIISANFAARELGI----PFLGLYGACSTMMESLALGSML 124 (337)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC---CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHH
Confidence 3567889999999999999999999999999997632 23467788888886 7899999999999999999999
Q ss_pred HHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHH
Q 015576 113 IQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (404)
Q Consensus 113 I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~ 192 (404)
|++|.+|+|||++.|+++++....+ ++. +||.
T Consensus 125 I~SG~ad~VLVV~Ssh~s~aerqfr---~P~----------------------------------eyg~----------- 156 (337)
T PRK08304 125 IDGGFADRVLAATSSHFATAERQFR---FPT----------------------------------EYGG----------- 156 (337)
T ss_pred HhcCCCCEEEEEEcchhhhhhhhcc---Cch----------------------------------hccc-----------
Confidence 9999999999999999988432221 111 1111
Q ss_pred HHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecC
Q 015576 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (404)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~ 272 (404)
.+| +.-.. +++||+|+||.+
T Consensus 157 ---------------------------qrp--------------------------~taqw-------tvtGAGA~i~~~ 176 (337)
T PRK08304 157 ---------------------------QRP--------------------------PTAQW-------TVTGAGAVLLSR 176 (337)
T ss_pred ---------------------------cCC--------------------------CcceE-------EeeccEEEEEec
Confidence 011 11122 599999999986
Q ss_pred HHHHHHcCCCceEEEEeeEEeccCCCccccch----HHHHHHHHHHcCCCCCCcceEeecccchHHHHHH---HHHhCCC
Q 015576 273 GVKALELGLQVIAKIRGFADAAQAPEWFTTAP----SLAIPKAIANAGLEASQIDYYEINEAFSVVAIAN---QKLLGLD 345 (404)
Q Consensus 273 ~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~----~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~---~e~lg~~ 345 (404)
.....+...-...+|..++.. +|..++.+. ...+.+-|+..|.+|+|.|++.+-|....=..+. ++.-|++
T Consensus 177 ~~~~~~i~~~t~Gkv~D~g~~--d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~vG~~i~~~ll~~~g~~ 254 (337)
T PRK08304 177 EGSGPRITHATIGKVVDLGIK--DPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRVGREILKELLKEEGYD 254 (337)
T ss_pred CCCCceEEEEeEEEEEecCCC--CcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchHHHHHHHHHHHHHHhCCC
Confidence 421000000112344444443 666666544 4557777889999999999999888776543333 3333554
Q ss_pred CCC-cCCCCCcc---------ccCCcccchHHHHHHHHHHHHHhcCCceeEEeeec
Q 015576 346 PEQ-VNAHGGAV---------SLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (404)
Q Consensus 346 ~~~-vn~~Gg~~---------~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~ 391 (404)
... .+--|-.+ +-|---|+|....-..++.+|+.+..++-|+...+
T Consensus 255 ~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~~~~~~~~~~~g~~~rvl~v~tG 310 (337)
T PRK08304 255 IGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVTYGYLLKELQKGKLKRVLVVATG 310 (337)
T ss_pred hhhcccccCeEEeccCCCcccCCCcccchhHHHHHHHHHHHHhcCCceEEEEEEch
Confidence 321 11111111 11222356666677788999998888887765443
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.4e-17 Score=161.16 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=88.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHH---HHCCCCCCcceeeEcccCCcHHHHHHHH
Q 015576 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAA---LGAGIPNSVVCTTINKVCSSGMKAVMLA 109 (404)
Q Consensus 33 ~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~---~~lGl~~~~~~~~v~~aCas~~~al~~A 109 (404)
++++..+|+++|++++|+++|+++++||.|++++.++....+..+..++ ..||.+ ++.+++++.+|.+++.||..|
T Consensus 49 ~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~AC~G~~~AL~~A 127 (459)
T PLN02577 49 DVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTNACYGGTAALLNC 127 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhhhhHHHHHHHHHH
Confidence 5789999999999999999999999999999999999877788887775 567775 789999999999999999999
Q ss_pred HHHHHcCCC--CeEEEeccccccC
Q 015576 110 AQSIQLGIN--DIVVAGGMESMSN 131 (404)
Q Consensus 110 ~~~I~aG~~--~~vLv~g~e~~s~ 131 (404)
..+|++|.. +.+||+++|..+.
T Consensus 128 ~~~i~sg~~~~~~aLVV~aD~a~~ 151 (459)
T PLN02577 128 VNWVESSSWDGRYGLVVAADSAVY 151 (459)
T ss_pred HHHHHcCCCCCCeEEEEEechhhc
Confidence 999999974 9999999998654
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.5e-15 Score=138.21 Aligned_cols=241 Identities=21% Similarity=0.198 Sum_probs=158.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHH
Q 015576 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 34 ~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I 113 (404)
++...+|+.+|+++||+++|++++|||.+++|+...+. .++..++..||+ |.+.++++|+++..+|..|+.+|
T Consensus 51 EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~---ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 51 EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQI---TPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCc---CcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHH
Confidence 34556899999999999999999999999999987432 345588888986 56999999999999999999999
Q ss_pred HcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015576 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~ 193 (404)
++|.+|+|||+...+..++.... |+
T Consensus 124 aSG~Ad~VLavtsSH~~~aErqf---R~---------------------------------------------------- 148 (334)
T PRK12404 124 NSGGAKYVLTGASSHNAAVEKQF---RY---------------------------------------------------- 148 (334)
T ss_pred HcCCCCEEEEEeCcccchhhhhc---cC----------------------------------------------------
Confidence 99999999999988877643222 11
Q ss_pred HHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCH
Q 015576 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (404)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~ 273 (404)
|.+. ...|| +.... ..-||+|+||...
T Consensus 149 ------------------P~ey--G~Qrp--------------------------~taqw-------TvTgaga~~l~~~ 175 (334)
T PRK12404 149 ------------------PTEY--GGQKP--------------------------PTAQW-------TVTGAGAAILSKT 175 (334)
T ss_pred ------------------cccc--cCcCC--------------------------CcccE-------EEEceEEEEEecC
Confidence 2111 01111 11111 3679999999764
Q ss_pred HHHHHcCCCceEEEEeeEEeccCCCccccch----HHHHHHHHHHcCCCCCCcceEeecccchHHHHHHH---HHhCCCC
Q 015576 274 VKALELGLQVIAKIRGFADAAQAPEWFTTAP----SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQ---KLLGLDP 346 (404)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~----~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~---e~lg~~~ 346 (404)
....+...-...+|..++.. +|..++.+. ...+.+-|+..|.+|+|.|+|.+-|....=..+.. +.-|++.
T Consensus 176 ~~~~~i~~~T~Gkv~D~g~~--d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~ 253 (334)
T PRK12404 176 GDGPRVTSATIGRVVDMGLT--DPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAKDLLHKHGVKV 253 (334)
T ss_pred CCCceEEEEEEEEEEecCCC--CcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchHHHHHHHHHHHHHHcCCCC
Confidence 21000000011344444443 677666544 45577778899999999999999888765433333 3335543
Q ss_pred -C-CcCCCCCc--------cccCCcccchHHHHHHHHHHHHHhcCCceeEEeeec
Q 015576 347 -E-QVNAHGGA--------VSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (404)
Q Consensus 347 -~-~vn~~Gg~--------~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~ 391 (404)
+ ..+--|-. .+-|---|+|....-..++.+|+.+..++-|+...+
T Consensus 254 ~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~~~~g~~~rvL~v~TG 308 (334)
T PRK12404 254 PEEQFQDCGLLIYREGQPVIAGASGPGCSATVTYGHLLNRMKRGELKRILVVATG 308 (334)
T ss_pred CcccccccCeEEecCCCcccCCCcccchHHHHHHHHHHHHHhcCCceEEEEEEch
Confidence 1 11111111 111222356666677788999998888887765443
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.1e-16 Score=160.13 Aligned_cols=240 Identities=19% Similarity=0.180 Sum_probs=173.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCCCCCc-------------------HHHHHHHHCCCCCCcce
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANLGQA-------------------PARQAALGAGIPNSVVC 92 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~~~~~-------------------~a~~i~~~lGl~~~~~~ 92 (404)
+...|..|+..+|+-||||+|.++.+ +++|+..++..+.. .+.+|+.-+.+ .+|+
T Consensus 86 Pq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS 163 (2376)
T KOG1202|consen 86 PQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPS 163 (2376)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCc
Confidence 45679999999999999999998865 56666544332211 23344444455 6899
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (404)
+.++++|+|++.+|..|.+.++.|++|.+||.|+...-+ |.....
T Consensus 164 ~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLk-Pt~slQ---------------------------------- 208 (2376)
T KOG1202|consen 164 FSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILK-PTTSLQ---------------------------------- 208 (2376)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEec-cchhhH----------------------------------
Confidence 999999999999999999999999999999999998766 432210
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCc
Q 015576 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGS 252 (404)
Q Consensus 173 ~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~ 252 (404)
+.|.|+ +. +++-|+. ||.. .+|+
T Consensus 209 ---FlRLgm------------------------ls--------~dGsCka---FDea-------------------gnGY 231 (2376)
T KOG1202|consen 209 ---FLRLGM------------------------LS--------PDGSCKA---FDEA-------------------GNGY 231 (2376)
T ss_pred ---HHHhcC------------------------cC--------CCCcccc---hhcc-------------------CCce
Confidence 000000 00 1333443 5554 7899
Q ss_pred cccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC------CccccchHHHHHHHHHHcCCCCCCcceEe
Q 015576 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (404)
Q Consensus 253 ~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~agl~~~dId~~~ 326 (404)
.| +||.++++|.+...|++. |+.|+...+++|+- ...+.....-+++.|+++|++|+++-|+|
T Consensus 232 ~R-------seg~~avllqrk~~ArRv----YAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvE 300 (2376)
T KOG1202|consen 232 CR-------SEGVVAVLLQRKSLARRV----YATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVE 300 (2376)
T ss_pred ee-------cCceEEEEEehhHHHHHH----HHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEE
Confidence 96 999999999998888754 56777777777642 22333446789999999999999999999
Q ss_pred ecccchHHH-----HHHHHHhC-CCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc
Q 015576 327 INEAFSVVA-----IANQKLLG-LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 327 ~hd~~~~~~-----~~~~e~lg-~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
.|...+... -.+.+.|= -...|+-..+.|.++||+--|||+..+++.+..++++
T Consensus 301 AHGtGTkVGDpQEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~g 360 (2376)
T KOG1202|consen 301 AHGTGTKVGDPQEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEG 360 (2376)
T ss_pred eccCCCCCCChHHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhC
Confidence 997766531 11122211 1124778888899999999999999999999999976
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.5e-15 Score=135.90 Aligned_cols=244 Identities=19% Similarity=0.166 Sum_probs=173.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceee-EcccCCcHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT-INKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~-v~~aCas~~~al~~A~~~I 113 (404)
+....|..+|.++||+.+++.|+|||.+++.++++-. .|.+-.++...|||++...-+- ...||+.+..+|..|+..+
T Consensus 74 e~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~-~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ 152 (356)
T COG3424 74 EEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYC 152 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeecccc-CCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHH
Confidence 3456799999999999999999999999999998744 5667778889999988665553 4589999999999999999
Q ss_pred HcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015576 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~ 193 (404)
++....+|||+.+|.+|..-
T Consensus 153 ra~P~~~vlvV~vELCSLt~------------------------------------------------------------ 172 (356)
T COG3424 153 RAAPDANVLVVCVELCSLTY------------------------------------------------------------ 172 (356)
T ss_pred hhCccceEEEEEeeeeeeee------------------------------------------------------------
Confidence 99999999999999998610
Q ss_pred HHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCH
Q 015576 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (404)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~ 273 (404)
+ +..+ . .++.+ -.++++||+||+|++.+
T Consensus 173 ------------------~-------------~~d~---------------t---~s~lV---gtaLF~DG~AA~vv~gd 200 (356)
T COG3424 173 ------------------V-------------FADD---------------T---KSNLV---GTALFGDGAAAVVVSGD 200 (356)
T ss_pred ------------------e-------------cCCC---------------C---cccce---eeeeecCCeeEEEEecc
Confidence 0 0000 0 00111 33458999999999986
Q ss_pred HHHHHc-CCCce------------EEEEeeEEeccC---------CCccccchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 274 VKALEL-GLQVI------------AKIRGFADAAQA---------PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 274 ~~a~~~-~~~~~------------~~i~g~~~~~~~---------~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
..+... ..+|. -.+.||.....+ |..........+...|...|++.+||+.+..|-..
T Consensus 201 ~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG 280 (356)
T COG3424 201 RRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGG 280 (356)
T ss_pred ccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCC
Confidence 543322 11221 133333333221 11222344688999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCCC-CccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeecc
Q 015576 332 SVVAIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNG 392 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~ 392 (404)
..+..+..+.||++++.+..+- .+.-+|+-..+|-+.-+-+.+++- .+.+.+||..+++=
T Consensus 281 ~KVida~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GP 341 (356)
T COG3424 281 PKVIDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGP 341 (356)
T ss_pred chHHHHHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCC
Confidence 9999999999999987432221 133468877777555544444433 36678899765543
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.3e-15 Score=145.66 Aligned_cols=97 Identities=19% Similarity=0.179 Sum_probs=84.4
Q ss_pred CCCHHHHHHH-HHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcc-cCCcHHHHHHHHHH
Q 015576 34 SVSATKLGSI-AIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK-VCSSGMKAVMLAAQ 111 (404)
Q Consensus 34 ~~~~~~l~~~-A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~-aCas~~~al~~A~~ 111 (404)
.....+|++. |+++||+++|++|++||.+|+ ++++....|..+..+...+|+++++..++++. +|++++.+|..|..
T Consensus 130 ~~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ 208 (466)
T PLN00415 130 ARHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATN 208 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHH
Confidence 3455666666 777889999999999999886 45565567888999999999988899999997 99999999999999
Q ss_pred HHHcCCCCeEEEeccccccC
Q 015576 112 SIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 112 ~I~aG~~~~vLv~g~e~~s~ 131 (404)
+++++....+||+++|..|.
T Consensus 209 ll~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 209 LLKANPNTYAVIVSTENMTL 228 (466)
T ss_pred HHHhCCCCEEEEEEEecccc
Confidence 99999999999999999875
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=143.13 Aligned_cols=96 Identities=11% Similarity=0.047 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHC---CCCCCcceeeEcccCCcHHHHHHH
Q 015576 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGA---GIPNSVVCTTINKVCSSGMKAVML 108 (404)
Q Consensus 32 ~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~l---Gl~~~~~~~~v~~aCas~~~al~~ 108 (404)
.++++..+|+..|++++|+++++++++||.|++++.++....+..+..++..| |.+ ++.++++..+|.++..||..
T Consensus 45 ~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~AC~G~t~AL~~ 123 (454)
T TIGR01833 45 TDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTNACYGGTAALFN 123 (454)
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccccchhHHHHHHH
Confidence 35689999999999999999999999999999999999888888888888754 555 78899999999999999999
Q ss_pred HHHHHHcCC--CCeEEEecccc
Q 015576 109 AAQSIQLGI--NDIVVAGGMES 128 (404)
Q Consensus 109 A~~~I~aG~--~~~vLv~g~e~ 128 (404)
|..+|++|. .+.+||+++|.
T Consensus 124 A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 124 AINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred HHHHHHcCCcCCCeEEEEEecc
Confidence 999999996 59999999998
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.2e-12 Score=117.25 Aligned_cols=94 Identities=26% Similarity=0.375 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC-----eEEEEeccCCC------------------------CCCcHHHHHHHHCCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ-----EVFFGNVLSAN------------------------LGQAPARQAALGAGI 86 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id-----~li~g~~~~~~------------------------~~~~~a~~i~~~lGl 86 (404)
+...|+..++++||+++|+++.+++ ++++|+..++. .....+.+++..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 4557999999999999999885432 47788876621 011256789999999
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
++|+++++++|+|++.||..|+.+|++|++|.+||+|+|....
T Consensus 166 --~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~ 208 (254)
T PF00109_consen 166 --RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLS 208 (254)
T ss_dssp ---SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SS
T ss_pred --CCccccccccccccccccchhcccccccccccccccccccccc
Confidence 5899999999999999999999999999999999999996544
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.4e-11 Score=110.89 Aligned_cols=96 Identities=17% Similarity=0.089 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCccee-eEcccCCcHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT-TINKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~-~v~~aCas~~~al~~A~~~I 113 (404)
+...+|+.+|+++||+++|+++++|+++|+.++++. ..|..-.++...|||++...-+ -...||.+|..+|..|....
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~-~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~ 176 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGI-AAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA 176 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSS-ECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCc-CCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence 346679999999999999999999999999999885 4677888999999998776654 45689999999999999999
Q ss_pred HcCCCCeEEEeccccccC
Q 015576 114 QLGINDIVVAGGMESMSN 131 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~ 131 (404)
++..-.+|||+.+|.+|.
T Consensus 177 ~~~p~a~VLvv~vElcsl 194 (226)
T PF00195_consen 177 RANPGARVLVVCVELCSL 194 (226)
T ss_dssp HHSTT-EEEEEEEEEGGG
T ss_pred hCCccceEEEEEEEeeEE
Confidence 999999999999999886
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=99.22 E-value=6e-11 Score=108.94 Aligned_cols=228 Identities=24% Similarity=0.238 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcC
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLG 116 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG 116 (404)
...|..+|++.||++++++++|||.++-|-...+. ..+...+..+++ |-+-+-.+|+++..+|..|+.+|..|
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~---i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI---ISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC---CHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh---HHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCC
Confidence 34599999999999999999999999998887654 244556666765 67899999999999999999999999
Q ss_pred CCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 015576 117 INDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196 (404)
Q Consensus 117 ~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~ 196 (404)
.+++||++...+..++.+.. |+ --+||..|
T Consensus 124 ~a~~vla~tSSH~~tAERQf---R~----------------------------------P~EyG~Qr------------- 153 (329)
T PF07451_consen 124 FADYVLAATSSHFATAERQF---RF----------------------------------PTEYGGQR------------- 153 (329)
T ss_dssp S-SEEEEEEEE-CCHHHHHT----------------------------------------GGGT----------------
T ss_pred CcceEEEEeccccchhhhhc---cC----------------------------------chhccCCC-------------
Confidence 99999999888776633222 11 11222111
Q ss_pred HHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHH
Q 015576 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKA 276 (404)
Q Consensus 197 a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a 276 (404)
| +.... ..-||+|+||.+...
T Consensus 154 -------------------------p--------------------------~tAqw-------TVTGaGa~il~~~~~- 174 (329)
T PF07451_consen 154 -------------------------P--------------------------PTAQW-------TVTGAGAAILSKEGS- 174 (329)
T ss_dssp ----------------------------------------------------TT--E-------E--EEEEEEEESS---
T ss_pred -------------------------C--------------------------CcccE-------EEeceEEEEEecCCC-
Confidence 1 11111 367999999986532
Q ss_pred HHcCCCceEEEEeeEEec------cCCCccccchH----HHHHHHHHHcCCCCCCcceEeecccchHHHHHH---HHHhC
Q 015576 277 LELGLQVIAKIRGFADAA------QAPEWFTTAPS----LAIPKAIANAGLEASQIDYYEINEAFSVVAIAN---QKLLG 343 (404)
Q Consensus 277 ~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~----~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~---~e~lg 343 (404)
.| +|.+..... .+|..++.+.. ..+.+-|+..|.+|+|.|+|.+-|....=..+. ++.-|
T Consensus 175 -----~p--~It~~T~GkVvD~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg~vG~~il~~Ll~~~G 247 (329)
T PF07451_consen 175 -----GP--RITHATIGKVVDMGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDLGKVGRKILRDLLKEKG 247 (329)
T ss_dssp -----SE--EEEEEE----B-SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-HHHHHHHHHHHHHHTT
T ss_pred -----Cc--EEEEEEEEEEEEcCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecchHHHHHHHHHHHHHHcC
Confidence 22 343333221 15666665443 456777889999999999999988776543333 34446
Q ss_pred CCCC--------------CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeec
Q 015576 344 LDPE--------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (404)
Q Consensus 344 ~~~~--------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~ 391 (404)
++.. +=+++.| |---|+|....-..++.+|+.+..++-|+...+
T Consensus 248 ~~i~~~~~DCG~~iyd~~~Qdv~aG----GSGcgCSA~V~~g~ll~~l~~g~~krvL~vaTG 305 (329)
T PF07451_consen 248 YDISENYNDCGLMIYDPEKQDVHAG----GSGCGCSAVVLCGYLLPKLRKGELKRVLFVATG 305 (329)
T ss_dssp ---GGGEEEHHHCSS-TT-S--TT-----EESHHHHHHHHHHCHHHHHHTTS-SEEEEEEEE
T ss_pred CCCccccccCCeEeecCCccccccC----CCCcchHHHHHHHHHHHHHHcCCceEEEEEEch
Confidence 5432 1122211 112266667777788999999888888765443
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.1e-10 Score=104.28 Aligned_cols=94 Identities=20% Similarity=0.189 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeE-cccCCcHHHHHHHHHHHHHc
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v-~~aCas~~~al~~A~~~I~a 115 (404)
...++..|+.++|+++|++|+|||.+|+.++.. ...|..+.+|.+++|++.++..+++ +.||++++.+|..|.++++.
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f-~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~ 161 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLF-NPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQA 161 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCC-CcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHh
Confidence 455888999999999999999999999888765 4567889999999999888888875 47999999999999999999
Q ss_pred CCCCeEEEeccccccC
Q 015576 116 GINDIVVAGGMESMSN 131 (404)
Q Consensus 116 G~~~~vLv~g~e~~s~ 131 (404)
..-.++||+.+|..+.
T Consensus 162 ~p~~~ALVVstE~~s~ 177 (290)
T PF08392_consen 162 HPNSYALVVSTENISA 177 (290)
T ss_pred CCCcEEEEEEEeeccc
Confidence 9999999999999886
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.9e-08 Score=82.58 Aligned_cols=97 Identities=27% Similarity=0.330 Sum_probs=68.4
Q ss_pred eEEEEeeEEeccC-CCc-----cccchHHHHHHHHHHcCCCCCCcceEeecccchHH-HH----HHHHHhCCCC--CCcC
Q 015576 284 IAKIRGFADAAQA-PEW-----FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV-AI----ANQKLLGLDP--EQVN 350 (404)
Q Consensus 284 ~~~i~g~~~~~~~-~~~-----~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~-~~----~~~e~lg~~~--~~vn 350 (404)
|+.|.|++...++ ... ...+..++++++|+++|++++|||+|+.|...+.. .. .+.+.++-.. .++.
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 4789999998865 221 12355799999999999999999999999888774 22 2333455432 4688
Q ss_pred CCCCccccCCcccchHHHHHHHHHHHHHhc
Q 015576 351 AHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 351 ~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
++.-|..+||+.+++|+..++.++.+|+++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~ 110 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHG 110 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHT
T ss_pred eeccccccccccccchHHHHHHHHHHHhcC
Confidence 888999999999999999999999999975
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.5e-08 Score=78.72 Aligned_cols=89 Identities=25% Similarity=0.183 Sum_probs=71.3
Q ss_pred HHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeec
Q 015576 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (404)
Q Consensus 312 l~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~ 391 (404)
|+++|++++|||++.+|+.+......+.+.+|++++++..+ ...+||+.+++-...+.+++++-+-++|++.+....+
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~--~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G 78 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDN--LAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFG 78 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-T--HHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHH--HhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEE
Confidence 68999999999999999999999999999999998877654 4778999999988888888887777788888888887
Q ss_pred cccceeeeEEE
Q 015576 392 GGGGASALVLE 402 (404)
Q Consensus 392 ~gG~~~a~ll~ 402 (404)
.|....++++|
T Consensus 79 ~G~~~~~~~~~ 89 (90)
T PF08541_consen 79 AGFSWGAAVLR 89 (90)
T ss_dssp TTTEEEEEEEE
T ss_pred hhheeEEEEEE
Confidence 77788888886
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.5e-08 Score=85.64 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=82.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCC--CCcceeeEcccCCcHHHHHHHHH
Q 015576 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP--NSVVCTTINKVCSSGMKAVMLAA 110 (404)
Q Consensus 33 ~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~--~~~~~~~v~~aCas~~~al~~A~ 110 (404)
++++...|++.|++++|++.++++++|+.+++|+-++-...-..+.+++..||++ .++..+++-++|-++..||..|.
T Consensus 49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~ 128 (174)
T PF01154_consen 49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAV 128 (174)
T ss_dssp TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHH
Confidence 4589999999999999999999999999999999988666777899999999993 35567899999999999999999
Q ss_pred HHHHcCCC--CeEEEecccccc
Q 015576 111 QSIQLGIN--DIVVAGGMESMS 130 (404)
Q Consensus 111 ~~I~aG~~--~~vLv~g~e~~s 130 (404)
.+|+++.. +.+||+++|...
T Consensus 129 ~~v~s~~~~g~~aLVVasDiA~ 150 (174)
T PF01154_consen 129 NWVASSPWDGRKALVVASDIAR 150 (174)
T ss_dssp HHHCSTTSTTEEEEEEEEEEE-
T ss_pred HHHhcCCCCCCeEEEEeccccc
Confidence 99999864 599999999753
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.1e-07 Score=70.56 Aligned_cols=39 Identities=26% Similarity=0.293 Sum_probs=35.3
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
++++++|++++.+|+.|..+|++|.++++||++.|.++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 578999999999999999999999999999999999876
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.9e-06 Score=85.33 Aligned_cols=108 Identities=22% Similarity=0.215 Sum_probs=83.6
Q ss_pred Ccccc-CCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC----c-----
Q 015576 230 EGLEK-FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE----W----- 299 (404)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~----~----- 299 (404)
+.+++ ++.+++++++++.| +++++|||+..||+++++++.++.+ + .++.|.+....+.. .
T Consensus 191 a~~~~eI~~~~v~~~~~~~d---p~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas~i~dga~a~~~~~~~~ 260 (392)
T COG0183 191 AGFFDEITPEDVLNSPVVAD---PLRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNASGINDGAAALLLMSESK 260 (392)
T ss_pred cCCCCceeeEEecCCceecC---CcccCCCCCChhhhcCceeccccCC---c----eEEEecccccccHHHHHHHhhHHH
Confidence 33334 88999999999888 9999999999999999999987531 1 45666664332211 0
Q ss_pred --cccchHHHHHHHHHHcCCCCC--CcceEeecccchHHHHHHHHHhCCCCC
Q 015576 300 --FTTAPSLAIPKAIANAGLEAS--QIDYYEINEAFSVVAIANQKLLGLDPE 347 (404)
Q Consensus 300 --~~~~~~~a~~~al~~agl~~~--dId~~~~hd~~~~~~~~~~e~lg~~~~ 347 (404)
.......+..++++.+|++|. ++|+.++||+|++..+..+|.+||++.
T Consensus 261 ~~~~~l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~ 312 (392)
T COG0183 261 AKELGLAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEK 312 (392)
T ss_pred HHHCCCcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCceec
Confidence 011235677889999999998 999999999999999999999999863
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00089 Score=63.73 Aligned_cols=112 Identities=13% Similarity=0.088 Sum_probs=81.9
Q ss_pred ceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCC--CCCCcc
Q 015576 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAG--IPNSVV 91 (404)
Q Consensus 14 ~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lG--l~~~~~ 91 (404)
.-|=||-||+..+--. +.++...|..-++++.+++-.++++.|..+-||+-+--...-..=..+.+.++ -...+.
T Consensus 40 gKytIGLGq~~Mgfcs---drEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIE 116 (462)
T KOG1393|consen 40 GKYTIGLGQTQMGFCS---DREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIE 116 (462)
T ss_pred cceEeccCcceecccC---chhhhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccc
Confidence 3566788887765322 23568889999999999999999999999999987543322223334444443 222677
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcC--CCCeEEEecccc
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLG--INDIVVAGGMES 128 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG--~~~~vLv~g~e~ 128 (404)
.++.-++|=+|..||-.|.++|++. .-+.+||+..|.
T Consensus 117 GiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDI 155 (462)
T KOG1393|consen 117 GIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDI 155 (462)
T ss_pred cccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeE
Confidence 8888899999999999999999976 346677777774
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.053 Score=49.07 Aligned_cols=89 Identities=15% Similarity=-0.004 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCC------------------------cHHHHHHHHCCCCCCcc
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ------------------------APARQAALGAGIPNSVV 91 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~------------------------~~a~~i~~~lGl~~~~~ 91 (404)
....|+.+++.+++++. .++|.+|+++..++.... ..+.+++...+. ..+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCc
Confidence 56778888888887642 467789999877764111 156677777777 579
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
+.++..+-.+...||..|..+++.| .+.||++.+|....
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p 145 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLP 145 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCC
Confidence 9999999999999999999999999 99999999998664
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.071 Score=50.01 Aligned_cols=48 Identities=17% Similarity=0.213 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCCCCCcceEee----cccchHHHHHHHHHhCCCCC--CcCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEI----NEAFSVVAIANQKLLGLDPE--QVNAH 352 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~----hd~~~~~~~~~~e~lg~~~~--~vn~~ 352 (404)
..+++++|+++|++|+|||++.+ ..+.+...-.+.+++|+..+ .+|++
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLs 141 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLS 141 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeeccc
Confidence 57899999999999999999974 45666778888999999765 34544
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.079 Score=53.99 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCCC--CcCCCCCccccCCcccchHHH-HHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~~--~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l 377 (404)
..|++++|+++|++|+|||++.+. .+++.....+.+++|+... .++++| .|++|.. .+--+-..|
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsg--------mGCSggl~aLdlA~~lL 252 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGG--------MGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEccc--------chhhhHHHHHHHHHHHH
Confidence 579999999999999999998754 3455667788899998632 344432 2445443 444444455
Q ss_pred HhcCCceeE
Q 015576 378 RHKKGKYGV 386 (404)
Q Consensus 378 ~~~~~~~gl 386 (404)
+..+.++.|
T Consensus 253 ~a~~~~~aL 261 (511)
T PLN02192 253 QVHPNSYAL 261 (511)
T ss_pred HcCCCCeEE
Confidence 544445544
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.077 Score=53.74 Aligned_cols=48 Identities=15% Similarity=0.130 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCCCCCcceEee----cccchHHHHHHHHHhCCCCC--CcCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEI----NEAFSVVAIANQKLLGLDPE--QVNAH 352 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~----hd~~~~~~~~~~e~lg~~~~--~vn~~ 352 (404)
..|++++|+++|++|+|||++.+ .++++.....+.++||+.+. .++++
T Consensus 153 ~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~ 206 (478)
T PLN02932 153 IGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLG 206 (478)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEec
Confidence 57999999999999999999974 46777788889999999642 44443
|
|
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.083 Score=45.01 Aligned_cols=103 Identities=18% Similarity=0.194 Sum_probs=69.1
Q ss_pred cchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCC-CccccCCcccchHHHHHHHHHHHHHhc
Q 015576 302 TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 302 ~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
....+.++++|++.|++..|++++.+|-....+.....+.||++++++..+= .+..+|+..++|-+.-+-++.++-..+
T Consensus 40 ~~i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~ 119 (151)
T PF02797_consen 40 DNIPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEE 119 (151)
T ss_dssp HHHHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhh
Confidence 3456789999999999977888999999999999999999999987543221 245679998888655555554422212
Q ss_pred -------CCceeEEeeeccccceeeeEEEeC
Q 015576 381 -------KGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 381 -------~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+.++++..+++=|=+--.+||++|
T Consensus 120 g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 120 GAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp TTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred cccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 135677766655445666888764
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.12 Score=52.59 Aligned_cols=48 Identities=15% Similarity=0.107 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCCC--CcCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPE--QVNAH 352 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~~--~vn~~ 352 (404)
..|++++|+++|++|+|||++.+. .+.+.....+.++||+.+. .++++
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~ 230 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLG 230 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecc
Confidence 579999999999999999999762 2455678888999998643 34443
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.24 Score=49.04 Aligned_cols=96 Identities=20% Similarity=0.115 Sum_probs=64.2
Q ss_pred EEEEeeEEeccCCC--c-cccchHHHHHHHHHHcCCCCCCcceEeecccch-HHHHHHHHHhCCCCCCcCCCCCccccCC
Q 015576 285 AKIRGFADAAQAPE--W-FTTAPSLAIPKAIANAGLEASQIDYYEINEAFS-VVAIANQKLLGLDPEQVNAHGGAVSLGH 360 (404)
Q Consensus 285 ~~i~g~~~~~~~~~--~-~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~-~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh 360 (404)
+.|.|.+...-... . ...-..+|++++|+.+|++++|||.+.+..... .....+.+.||+...++. .-+
T Consensus 10 vaIvG~g~t~~~~~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~~~~~~la~~lGl~~~~~~-------~~~ 82 (384)
T PRK06158 10 TAIVGAATAGLGEAPGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDALWGLSVAEYLGIRPRFVD-------GTM 82 (384)
T ss_pred EEEEEeeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCCCcHHHHHHHcCCCCeeec-------ccc
Confidence 67888887643221 1 112337899999999999999999887643211 112346788998654321 124
Q ss_pred cccchHHHHHHHHHHHHHhcCCceeEE
Q 015576 361 PLGCSGARILVTLLGVLRHKKGKYGVG 387 (404)
Q Consensus 361 ~~gasG~~~l~~~~~~l~~~~~~~gl~ 387 (404)
..++++...+..+...++....+..|+
T Consensus 83 ~g~~s~~~al~~A~~~I~sG~~d~vLV 109 (384)
T PRK06158 83 IGGSSFLAHLLPAALALEAGLCDVALI 109 (384)
T ss_pred CccHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 456778888889999999777777665
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.24 Score=47.53 Aligned_cols=69 Identities=25% Similarity=0.320 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHcCCCCCCcceEee-----cccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEI-----NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~-----hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+|++++|+.+|++++|||++.+ ...|+...-.+.+.||+..-+ .|==...|+|+.--+....++-
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--------afDl~aaCsgf~yaL~~A~~~i 127 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--------AFDLQAACSGFLYALSVADGLI 127 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--------eeechhhhHHHHHHHHHHHHHH
Confidence 378999999999999999999984 245677788888999986521 1223447788775555555544
Q ss_pred hc
Q 015576 379 HK 380 (404)
Q Consensus 379 ~~ 380 (404)
..
T Consensus 128 ~s 129 (323)
T COG0332 128 RS 129 (323)
T ss_pred Hc
Confidence 43
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.54 Score=43.27 Aligned_cols=92 Identities=25% Similarity=0.202 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCC-CCCcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
...+++++|+++|++++|||.+.+... .....-.+.+.+|+. .+.+.+. ...++++..+..+...|
T Consensus 11 ~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~~~i~--------~~C~s~~~al~~A~~~i 82 (254)
T cd00327 11 GFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVN--------QACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCcceec--------cHhHHHHHHHHHHHHHH
Confidence 368999999999999999999975432 334445677888984 2222221 22335566777777778
Q ss_pred HhcCCceeEEeee---ccccceeeeEEEe
Q 015576 378 RHKKGKYGVGGIC---NGGGGASALVLEL 403 (404)
Q Consensus 378 ~~~~~~~gl~~~~---~~gG~~~a~ll~~ 403 (404)
+....++.|+..+ ..|..+.++||++
T Consensus 83 ~~g~~~~~lv~~~e~~~~gdGAaa~vL~~ 111 (254)
T cd00327 83 QNGKADIVLAGGSEEFVFGDGAAAAVVES 111 (254)
T ss_pred HCCCCCEEEEEecceeeecceEEEEEECc
Confidence 7776777775543 2344566777763
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.4 Score=46.47 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=46.6
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCC--CcCCCCCccccCCcccch-HHHHHHHHH
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCS-GARILVTLL 374 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~--~vn~~Gg~~~~Gh~~gas-G~~~l~~~~ 374 (404)
-..+|++++|+++|++++|||++..... .......+.+.||+... .+.+ .+ +++ |+..+..+.
T Consensus 64 la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v-------~~--~C~~~~~al~~A~ 134 (338)
T PRK09258 64 GAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDV-------SN--ACLGFLNGMLDAA 134 (338)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeeh-------hh--hhHHHHHHHHHHH
Confidence 3478999999999999999999975322 22334556788998642 2222 11 333 344555555
Q ss_pred HHHHhcCCceeE
Q 015576 375 GVLRHKKGKYGV 386 (404)
Q Consensus 375 ~~l~~~~~~~gl 386 (404)
..++.+..++.|
T Consensus 135 ~~i~~g~~~~~L 146 (338)
T PRK09258 135 NMIELGQIDYAL 146 (338)
T ss_pred HHHHcCCCCEEE
Confidence 556555455555
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.37 Score=49.36 Aligned_cols=74 Identities=18% Similarity=0.269 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCCC--CcCCCCCccccCCcccchHHH-HHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~~--~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l 377 (404)
..+++++|+++|++++|||++.+. .+++.....+.++||+... .++++| .||+|.. .+--+-.-|
T Consensus 193 ~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsg--------mGCSggl~aL~lA~~lL 264 (521)
T PLN02854 193 FGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGG--------MGCSAGLISIDLANDLL 264 (521)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEeccc--------chhhhHHHHHHHHHHHH
Confidence 468999999999999999999863 2455667778899998643 233321 2555544 443344444
Q ss_pred HhcCCceeE
Q 015576 378 RHKKGKYGV 386 (404)
Q Consensus 378 ~~~~~~~gl 386 (404)
+..+.++.|
T Consensus 265 ~~~~~~~aL 273 (521)
T PLN02854 265 KANPNSYAV 273 (521)
T ss_pred HhCCCCeEE
Confidence 444444443
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.34 Score=48.28 Aligned_cols=76 Identities=21% Similarity=0.210 Sum_probs=48.1
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHHHh
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVLRH 379 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l~~ 379 (404)
.+|++++|+++|++++|||++.+- ..++.....+.+.||+.+... ..+-.-.||+|.. .+-.+...++.
T Consensus 111 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~------r~~d~~~gC~G~~~aL~~A~~l~~~ 184 (401)
T PLN03170 111 KAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVN------RLMMYQQGCFAGGTVLRVAKDLAEN 184 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccH------HHHhhcChhHHHHHHHHHHHHHHHc
Confidence 689999999999999999987532 236667888899999865410 1122334556544 33333444444
Q ss_pred cCCceeE
Q 015576 380 KKGKYGV 386 (404)
Q Consensus 380 ~~~~~gl 386 (404)
...++.|
T Consensus 185 ~~~~~vL 191 (401)
T PLN03170 185 NRGARVL 191 (401)
T ss_pred CCCCeEE
Confidence 4455554
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.54 Score=45.31 Aligned_cols=43 Identities=26% Similarity=0.254 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeec----c-cchHHHHHHHHHhCCCC
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEIN----E-AFSVVAIANQKLLGLDP 346 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~h----d-~~~~~~~~~~e~lg~~~ 346 (404)
..+|++++|+++|++++|||++... | ..+.....+.+.||+..
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~ 103 (326)
T PRK05963 56 AASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQN 103 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCC
Confidence 3789999999999999999999752 2 22344566788999864
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.48 Score=47.69 Aligned_cols=44 Identities=11% Similarity=0.137 Sum_probs=34.1
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCC
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDP 346 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~ 346 (404)
....|++++|+++|++++|||++.+. ..++.....+.+.+|+.+
T Consensus 137 ~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~ 184 (466)
T PLN00415 137 VIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKT 184 (466)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCC
Confidence 34568999999999999999987643 234556777888999873
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.49 Score=46.93 Aligned_cols=98 Identities=19% Similarity=0.221 Sum_probs=63.0
Q ss_pred EEEEeeEEecc-C--CCc-cccchHHHHHHHHHHcCCCCCCcceEeec---ccch---HHHHHHHHHhCCCCCCcCCCCC
Q 015576 285 AKIRGFADAAQ-A--PEW-FTTAPSLAIPKAIANAGLEASQIDYYEIN---EAFS---VVAIANQKLLGLDPEQVNAHGG 354 (404)
Q Consensus 285 ~~i~g~~~~~~-~--~~~-~~~~~~~a~~~al~~agl~~~dId~~~~h---d~~~---~~~~~~~e~lg~~~~~vn~~Gg 354 (404)
+.|.|.+.... . +.. ...-..+|++++|+.+|++++|||.+.+. +.+. .....+.+.||+...+...
T Consensus 5 v~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~~~--- 81 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPLIR--- 81 (386)
T ss_pred EEEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCCCceEE---
Confidence 56888887643 1 111 11233789999999999999999988764 2221 1224567889986544211
Q ss_pred ccccCCcccchHHHHHHHHHHHHHhcCCceeEEee
Q 015576 355 AVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGI 389 (404)
Q Consensus 355 ~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~ 389 (404)
+ +..+++|...+..+...++....++.|+..
T Consensus 82 ---v-~~~casg~~al~~A~~~I~sG~~~~vLVvg 112 (386)
T PRK08313 82 ---V-HTAGSVGGSTAVVAASLVQSGVYRRVLAVA 112 (386)
T ss_pred ---E-eccCHHHHHHHHHHHHHHHCCCCCEEEEEE
Confidence 1 234567777788888888876667766543
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.4 Score=47.60 Aligned_cols=76 Identities=22% Similarity=0.161 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecc----cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHHHh
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVLRH 379 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd----~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l~~ 379 (404)
.+|++++|+++|++++|||++.+.- .++.....+.+.||+..... ..+-+..||+|.. .+..+...++.
T Consensus 111 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~------~~~d~~~gC~g~~~aL~~A~~~~~~ 184 (391)
T PLN03169 111 VEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQ------RVMLYFLGCSGGVAGLRVAKDIAEN 184 (391)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcce------eeecccChhHHHHHHHHHHHHHHHh
Confidence 6899999999999999999876432 34555667888999875321 1122334666644 44444444554
Q ss_pred cCCceeE
Q 015576 380 KKGKYGV 386 (404)
Q Consensus 380 ~~~~~gl 386 (404)
...++.|
T Consensus 185 ~~~~~vL 191 (391)
T PLN03169 185 NPGSRVL 191 (391)
T ss_pred CCCCeEE
Confidence 4455554
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.6 Score=47.91 Aligned_cols=109 Identities=12% Similarity=-0.078 Sum_probs=65.8
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc-c
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-V 91 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~-~ 91 (404)
+.|+|.|.+...-.......++.........|+++|++.+|++++|||.+-+-.+++ .......+.|||.... .
T Consensus 266 ~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~-----~~~~~~~E~LGl~~~g~~ 340 (498)
T PRK08257 266 RWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFP-----SAVQVAARELGLDLDDPR 340 (498)
T ss_pred ceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCH-----HHHHHHHHHcCcCCCCCC
Confidence 468999987763221111122233333445689999999999999999876644432 1222334668875431 0
Q ss_pred eeeEc--------ccCCcHHHHHHHHHHHHHcCCCCeEEEecc
Q 015576 92 CTTIN--------KVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126 (404)
Q Consensus 92 ~~~v~--------~aCas~~~al~~A~~~I~aG~~~~vLv~g~ 126 (404)
-++++ ...++++..+..+...++....++.|+.+.
T Consensus 341 pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~ 383 (498)
T PRK08257 341 PLTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTAN 383 (498)
T ss_pred CcCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECC
Confidence 22222 223446777888888888766788887653
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.32 Score=44.25 Aligned_cols=43 Identities=30% Similarity=0.311 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCCCCcceEeeccc----chHHHHHHHHHhCCCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPE 347 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~----~~~~~~~~~e~lg~~~~ 347 (404)
.+|++++|+++|++++||+++.+--+ .+.....+.+.||+.+.
T Consensus 105 ~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~ 151 (226)
T PF00195_consen 105 EEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPD 151 (226)
T ss_dssp HHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TT
T ss_pred HHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCC
Confidence 68999999999999999999985543 33457888999999875
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.86 Score=44.18 Aligned_cols=77 Identities=17% Similarity=0.039 Sum_probs=45.1
Q ss_pred chHHHHHHHHHHcCCCCCCcceEee-ccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccc-hHHHHHHHHHH
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEI-NEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC-SGARILVTLLG 375 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~-hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~ga-sG~~~l~~~~~ 375 (404)
-..+|++++|+++|++++|||++.. +.. .......+.+.||+...+. +....++ +++..+..+..
T Consensus 56 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~~~~--------~~v~~~C~~~~~al~~A~~ 127 (339)
T PRK06840 56 MAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKNAWA--------FDIMAVCASFPIALKVAKD 127 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCCccc--------ccccccchHHHHHHHHHHH
Confidence 3478999999999999999998863 211 2222445678899853221 1111233 34445555556
Q ss_pred HHHh-cCCceeEE
Q 015576 376 VLRH-KKGKYGVG 387 (404)
Q Consensus 376 ~l~~-~~~~~gl~ 387 (404)
.++. ...++.|+
T Consensus 128 ~l~~~g~~~~~Lv 140 (339)
T PRK06840 128 LLYSDPSIENVLL 140 (339)
T ss_pred HHhcCCCccEEEE
Confidence 6655 33344443
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.84 Score=45.26 Aligned_cols=97 Identities=18% Similarity=0.069 Sum_probs=63.3
Q ss_pred EEEEeeEEeccCCC--c-cccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCC-CCcCCCCCccccCC
Q 015576 285 AKIRGFADAAQAPE--W-FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDP-EQVNAHGGAVSLGH 360 (404)
Q Consensus 285 ~~i~g~~~~~~~~~--~-~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~-~~vn~~Gg~~~~Gh 360 (404)
+.|.|.+.+.-... . ...-..+|++++|+.+|++++|||.+.+..........+.+.||+.. .++. .-+
T Consensus 6 v~IvG~g~t~~~r~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~l~~~lGl~~~~~~~-------~v~ 78 (386)
T PRK07855 6 AAIVGIGATEFSKNSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMDTNPEIAVARALGIGELKFFS-------RIH 78 (386)
T ss_pred EEEEEeeecccccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCccccHHHHHHHCCCCCCccee-------eec
Confidence 57888887532221 1 11233789999999999999999988652211111234678899865 3321 113
Q ss_pred cccchHHHHHHHHHHHHHhcCCceeEEe
Q 015576 361 PLGCSGARILVTLLGVLRHKKGKYGVGG 388 (404)
Q Consensus 361 ~~gasG~~~l~~~~~~l~~~~~~~gl~~ 388 (404)
..|++|...+..+...++...-+..|+.
T Consensus 79 ~gg~sg~~~~~~A~~~I~sG~~d~vLv~ 106 (386)
T PRK07855 79 YGGGAACATVQQAAMAVATGVADVVVCY 106 (386)
T ss_pred CCcHHHHHHHHHHHHHHHCCCCCEEEEE
Confidence 4577888889999999987766766654
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=92.45 E-value=0.48 Score=47.03 Aligned_cols=43 Identities=33% Similarity=0.269 Sum_probs=35.2
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPE 347 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~~ 347 (404)
.+|++++|+++|++++|||++.+. ...+.....+.+.||+.+.
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~ 152 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPT 152 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCc
Confidence 689999999999999999999744 3355667788899998653
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.74 Score=44.44 Aligned_cols=75 Identities=17% Similarity=0.071 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc----chHHHHHHHHHhCCCCCCcCCCCCccccCCcc-cchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL-GCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~-gasG~~~l~~~~~~l~ 378 (404)
..++++++|+++|++++|||++..... .........+.||+...+. +.... .++|+..+..+...++
T Consensus 55 a~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~~--------~~v~~~Casg~~al~~A~~~i~ 126 (326)
T CHL00203 55 AAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAVA--------FDITAACSGFILALVTATQFIQ 126 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCce--------eeecccchhHHHHHHHHHHHHH
Confidence 478999999999999999999975421 1122345667888754321 11111 2345556666666666
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 127 sg~~~~~L 134 (326)
T CHL00203 127 NGSYKNIL 134 (326)
T ss_pred cCCCCEEE
Confidence 55444444
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.11 E-value=0.71 Score=45.75 Aligned_cols=96 Identities=11% Similarity=0.129 Sum_probs=62.5
Q ss_pred EEEEeeEEeccCC--C-ccccchHHHHHHHHHHcCCCCCCcceEeecccch-----HHHHHHHHHhCCCCCC-cCCCCCc
Q 015576 285 AKIRGFADAAQAP--E-WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFS-----VVAIANQKLLGLDPEQ-VNAHGGA 355 (404)
Q Consensus 285 ~~i~g~~~~~~~~--~-~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~-----~~~~~~~e~lg~~~~~-vn~~Gg~ 355 (404)
+.|.|.+...-.. . ....-..++++++|+++|++++|||.+.+..... .....+.+.+|+...+ +.+
T Consensus 3 v~IvG~g~t~~~~~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~~~~v---- 78 (385)
T PRK12578 3 VAVIGVGNSKFGRRDDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVPLRV---- 78 (385)
T ss_pred eEEEeecccceeecCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCCeeEE----
Confidence 4677777653221 1 1122336899999999999999999987543221 1234467788986533 222
Q ss_pred cccCCcccchHHHHHHHHHHHHHhcCCceeEEe
Q 015576 356 VSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (404)
Q Consensus 356 ~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~ 388 (404)
+...++|+..+..+...++....++.|+.
T Consensus 79 ----~~~casg~~al~~A~~~I~sG~~~~vLvv 107 (385)
T PRK12578 79 ----EAMCATGLAASLTAYTAVASGLVDMAIAV 107 (385)
T ss_pred ----eccCHHHHHHHHHHHHHHHCCCCCEEEEE
Confidence 24466788888899999997766766643
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.94 E-value=1.1 Score=45.19 Aligned_cols=96 Identities=18% Similarity=0.107 Sum_probs=62.1
Q ss_pred EEEEeeEEeccCCC----ccccchHHHHHHHHHHcCCCCCCcceEeecc---cch---HHHHHHHHHhCCCCCCcCCCCC
Q 015576 285 AKIRGFADAAQAPE----WFTTAPSLAIPKAIANAGLEASQIDYYEINE---AFS---VVAIANQKLLGLDPEQVNAHGG 354 (404)
Q Consensus 285 ~~i~g~~~~~~~~~----~~~~~~~~a~~~al~~agl~~~dId~~~~hd---~~~---~~~~~~~e~lg~~~~~vn~~Gg 354 (404)
+.|.|.+.+--... ....-...+++++|+++|++++|||.+.... .+. .....+.+.+|+...+...
T Consensus 18 VaIvG~g~Tpfgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~~~~--- 94 (430)
T PRK06365 18 VYMVAAGVTKFDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKPSKR--- 94 (430)
T ss_pred EEEEEeeecCccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCceEE---
Confidence 56777765532211 1112336889999999999999999876532 121 1223346889986544321
Q ss_pred ccccCCcccchHHHHHHHHHHHHHhcCCceeEE
Q 015576 355 AVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (404)
Q Consensus 355 ~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~ 387 (404)
-+..++||...+..+...++....+..|+
T Consensus 95 ----v~~~~aSg~~ai~~A~~~I~sG~~~~vLv 123 (430)
T PRK06365 95 ----IEGGGATGGLAFQAGYEEIASGRMDCVAV 123 (430)
T ss_pred ----EeCCcHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 13457899999999999999776666554
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.91 E-value=1.2 Score=44.33 Aligned_cols=96 Identities=18% Similarity=0.085 Sum_probs=63.8
Q ss_pred EEEEeeEEeccCC--Cc-cccchHHHHHHHHHHcCCCCCCcceEeecccchH-HHHHHHHHhCCCCCCcCCCCCccccCC
Q 015576 285 AKIRGFADAAQAP--EW-FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSV-VAIANQKLLGLDPEQVNAHGGAVSLGH 360 (404)
Q Consensus 285 ~~i~g~~~~~~~~--~~-~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~-~~~~~~e~lg~~~~~vn~~Gg~~~~Gh 360 (404)
+.|.|.+.+.-.. .. ...-..+|++++|+.+|++++|||.+........ ....+.+.||+...++. ..+
T Consensus 7 vaIvG~g~t~~~~~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~lGl~~~~~~-------~v~ 79 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGLGPASMVDYLGLKLRHVD-------STE 79 (388)
T ss_pred EEEEEEeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCccHHHHHHhCCCCCeeec-------ccc
Confidence 6788888764221 11 1223478999999999999999998765211111 11346788999653332 134
Q ss_pred cccchHHHHHHHHHHHHHhcCCceeEE
Q 015576 361 PLGCSGARILVTLLGVLRHKKGKYGVG 387 (404)
Q Consensus 361 ~~gasG~~~l~~~~~~l~~~~~~~gl~ 387 (404)
..|++|...+..+...++...-+..|+
T Consensus 80 ~gg~s~~~a~~~A~~~I~sG~~d~vLv 106 (388)
T PRK08142 80 TGGSSYLAHVGHAAQAIAAGKCSVALI 106 (388)
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 568888888999999999876666664
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.67 Score=46.03 Aligned_cols=43 Identities=28% Similarity=0.212 Sum_probs=35.0
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPE 347 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~~ 347 (404)
.+|++++|+++|++++|||++.+. ..++.....+.+.||+...
T Consensus 107 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~ 153 (391)
T PLN03173 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSS 153 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCcc
Confidence 579999999999999999987532 3366778888999998753
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.69 Score=46.10 Aligned_cols=43 Identities=33% Similarity=0.328 Sum_probs=35.3
Q ss_pred HHHHHHHHHHcCCCCCCcceEee----cccchHHHHHHHHHhCCCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEI----NEAFSVVAIANQKLLGLDPE 347 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~----hd~~~~~~~~~~e~lg~~~~ 347 (404)
.+|++++|+++|++++|||++.+ .+.++.....+.+.||+...
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~ 159 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPS 159 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcc
Confidence 68999999999999999999975 34466677788899998653
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.23 Score=46.53 Aligned_cols=69 Identities=22% Similarity=0.248 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc----hHHHHHHHHHhCCCCC--CcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF----SVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~----~~~~~~~~e~lg~~~~--~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
.++.+++|+.+++.++|||.+.+-.+. +..+..+...||+.+. +++++| .|-..|++|+....+-++.-
T Consensus 81 v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~g----lGCaaga~glara~~y~ra~ 155 (356)
T COG3424 81 VDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWG----LGCAAGAAGLARARDYCRAA 155 (356)
T ss_pred HHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeec----chhhhhhhHHHHHHHHHhhC
Confidence 689999999999999999999865433 2346777889999875 566554 67777888877766665543
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.71 Score=45.02 Aligned_cols=77 Identities=18% Similarity=0.297 Sum_probs=47.9
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccch-HHHHHHHHHHH
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS-GARILVTLLGV 376 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gas-G~~~l~~~~~~ 376 (404)
-..+|++++|+++|++++|||.+.+... .+.....+.+.||+.+. ... +--..+++ ++..+..+...
T Consensus 53 la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~-~~~------~dv~~aC~g~~~al~~A~~~ 125 (345)
T TIGR00748 53 IGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPD-LTA------ADLEFACKAGTAGIQACMGL 125 (345)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCC-ceE------EEHHHhHHHHHHHHHHHHHH
Confidence 3478999999999999999999875322 12234456788998532 111 11123555 34456666666
Q ss_pred HHhcCCceeE
Q 015576 377 LRHKKGKYGV 386 (404)
Q Consensus 377 l~~~~~~~gl 386 (404)
++....++.|
T Consensus 126 i~sg~~~~vL 135 (345)
T TIGR00748 126 VASGMIKYGL 135 (345)
T ss_pred HHcCCCCEEE
Confidence 6665556665
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.67 Score=46.08 Aligned_cols=43 Identities=30% Similarity=0.291 Sum_probs=35.5
Q ss_pred HHHHHHHHHHcCCCCCCcceEee----cccchHHHHHHHHHhCCCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEI----NEAFSVVAIANQKLLGLDPE 347 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~----hd~~~~~~~~~~e~lg~~~~ 347 (404)
.+|++++|+++|++++|||++.+ ...++.....+.+.||+.+.
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~ 153 (393)
T PLN03172 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPS 153 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCC
Confidence 67999999999999999998752 33467778888999998754
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.87 Score=45.24 Aligned_cols=97 Identities=18% Similarity=0.034 Sum_probs=63.4
Q ss_pred EEEEeeEEeccCCC---ccccchHHHHHHHHHHcCCCCCCcceEeec---ccc---hHHHHHHHHHhCCCCCCcCCCCCc
Q 015576 285 AKIRGFADAAQAPE---WFTTAPSLAIPKAIANAGLEASQIDYYEIN---EAF---SVVAIANQKLLGLDPEQVNAHGGA 355 (404)
Q Consensus 285 ~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~agl~~~dId~~~~h---d~~---~~~~~~~~e~lg~~~~~vn~~Gg~ 355 (404)
+.|.|.+...-... ....-..+|++++|+++|++++|||.+.+. +.+ ......+.+.+|+...+...
T Consensus 11 vaIvG~g~t~~~~~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~~~~---- 86 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKPVSR---- 86 (392)
T ss_pred eEEEEecccCCcCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCCeEE----
Confidence 57888887643221 112233689999999999999999988764 222 11233455777775433211
Q ss_pred cccCCcccchHHHHHHHHHHHHHhcCCceeEEe
Q 015576 356 VSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (404)
Q Consensus 356 ~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~ 388 (404)
. +..++||...+..+...++....+..|+.
T Consensus 87 --V-~~~gasG~~al~~A~~~I~sG~ad~vLVv 116 (392)
T PRK06065 87 --V-YVGGATGVMTAIAGWYHVASGLCQKVLAV 116 (392)
T ss_pred --E-ecCchhHHHHHHHHHHHHhCCCCCEEEEE
Confidence 1 33478888888899999998777777654
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.56 Score=44.95 Aligned_cols=75 Identities=17% Similarity=0.094 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccc--hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAF--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~--~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~ 381 (404)
..+|++++|+++|++++|||++...+.. .....+.++.||++. +.+. ...++++..+..+...++...
T Consensus 60 a~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIPa--~dV~--------gACST~~~AL~lAa~lI~SG~ 129 (337)
T PRK08304 60 MEDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIPF--LGLY--------GACSTMMESLALGSMLIDGGF 129 (337)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCcE--EEEe--------ccCHHHHHHHHHHHHHHhcCC
Confidence 3789999999999999999999765432 223445567788621 1211 112344556767777777655
Q ss_pred CceeEEe
Q 015576 382 GKYGVGG 388 (404)
Q Consensus 382 ~~~gl~~ 388 (404)
.++.|+.
T Consensus 130 ad~VLVV 136 (337)
T PRK08304 130 ADRVLAA 136 (337)
T ss_pred CCEEEEE
Confidence 5665543
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=91.47 E-value=1.2 Score=42.73 Aligned_cols=76 Identities=24% Similarity=0.219 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecc----c-chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINE----A-FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd----~-~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...|++++|+++|++++|||.+..-. . .......+.+.||+...+.. .+. ...++++..+..+...++
T Consensus 54 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~~~------~v~-~~C~s~~~al~~A~~~i~ 126 (320)
T cd00830 54 AVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAAAF------DIN-AACSGFLYGLSTAAGLIR 126 (320)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcEe------ecc-ccchHHHHHHHHHHHHHH
Confidence 46899999999999999999886422 1 23345557788998532211 111 223455666666777777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 127 ~g~~~~vL 134 (320)
T cd00830 127 SGGAKNVL 134 (320)
T ss_pred cCCCCEEE
Confidence 66555554
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=91.43 E-value=0.99 Score=44.96 Aligned_cols=97 Identities=16% Similarity=0.120 Sum_probs=60.8
Q ss_pred EEEEeeEEeccCC--CccccchHHHHHHHHHHcCCCCCCcceEeecc----cc--hHHHHHHHHHhCCCCCCcCCCCCcc
Q 015576 285 AKIRGFADAAQAP--EWFTTAPSLAIPKAIANAGLEASQIDYYEINE----AF--SVVAIANQKLLGLDPEQVNAHGGAV 356 (404)
Q Consensus 285 ~~i~g~~~~~~~~--~~~~~~~~~a~~~al~~agl~~~dId~~~~hd----~~--~~~~~~~~e~lg~~~~~vn~~Gg~~ 356 (404)
+.|.|.+...-.. .....-..++++++|+++|++++|||.+.... .+ ......+.+.+|+...+...
T Consensus 6 v~Ivg~~~t~~~r~~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~~----- 80 (399)
T PRK06059 6 VYILGAGMHPWGKWGRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVSS----- 80 (399)
T ss_pred EEEEEecccccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCceec-----
Confidence 4566666553221 11122336899999999999999999887431 11 11224467789986433321
Q ss_pred ccCCcccchHHHHHHHHHHHHHhcCCceeEEe
Q 015576 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (404)
Q Consensus 357 ~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~ 388 (404)
=+...++|+..+..+...++....+..|+.
T Consensus 81 --v~~~Casg~~al~~A~~~I~sG~~~~vLvv 110 (399)
T PRK06059 81 --SYAACASGSQALQSARAQILAGLCDVALVV 110 (399)
T ss_pred --ccchhHHHHHHHHHHHHHHHCCCCCEEEEE
Confidence 134456778888889999987666666643
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.43 E-value=1.1 Score=44.36 Aligned_cols=76 Identities=18% Similarity=0.179 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+|++++|+++|++++|||.+..... +......+.+.||+...+.. .+ +...++|+..+..+...++
T Consensus 67 a~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~------~v-~~~Cas~~~al~~A~~~i~ 139 (378)
T PRK06816 67 AAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIEVV------SS-AGVCAAGMMALKYAYLSVK 139 (378)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCcee------ee-cCcCHHHHHHHHHHHHHHH
Confidence 478999999999999999998865322 23333455677887643321 12 1223445556655666666
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
.+..++.|
T Consensus 140 sg~~~~vL 147 (378)
T PRK06816 140 AGESRNAV 147 (378)
T ss_pred CCCCCEEE
Confidence 55445544
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=91.40 E-value=0.74 Score=43.94 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=51.6
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc--hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~--~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~ 382 (404)
.+|++++|+++|++++|||++...+.. .....+.++.||++- +++. .--+|++..+..+...++....
T Consensus 59 ~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipssfvar~LGIP~--~gV~--------gACSTg~eAL~lAa~~VaSG~A 128 (334)
T PRK12404 59 EEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTSFAARTLGIPY--LGLF--------GACSTSMEGLALAALIVNSGGA 128 (334)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHHHHHHHhCCCc--ccee--------ecCHHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999875543 222336778899542 2222 1123455577777777777666
Q ss_pred ceeEEeeec
Q 015576 383 KYGVGGICN 391 (404)
Q Consensus 383 ~~gl~~~~~ 391 (404)
++.|+..+.
T Consensus 129 d~VLavtsS 137 (334)
T PRK12404 129 KYVLTGASS 137 (334)
T ss_pred CEEEEEeCc
Confidence 666655443
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.67 Score=44.29 Aligned_cols=76 Identities=12% Similarity=0.079 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccc--hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAF--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~--~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~ 381 (404)
..+|++++|+++|++++|||++...+.. ........+.||++. +.++ ...++++..+..+...++...
T Consensus 54 a~eAa~~ALekAGL~~~DID~IIvGdl~~Q~~~As~vA~~LGIP~--fdV~--------~ACSTf~~AL~lAa~lI~SG~ 123 (327)
T TIGR02845 54 MEDAVNLALKKANLKKDDVDFFLAGDLLNQIITANFVARDLGIPF--LGLY--------GACSTSMETLALGAMLVDGGF 123 (327)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeCCCCcccHHHHHHHHhCCCE--EEEe--------ccCHHHHHHHHHHHHHHhCCC
Confidence 3689999999999999999999865532 123445668888622 2221 112345556777777777665
Q ss_pred CceeEEee
Q 015576 382 GKYGVGGI 389 (404)
Q Consensus 382 ~~~gl~~~ 389 (404)
.++.|+..
T Consensus 124 ad~VLVV~ 131 (327)
T TIGR02845 124 ADRVLAAT 131 (327)
T ss_pred CCEEEEEE
Confidence 56665443
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.99 Score=43.37 Aligned_cols=76 Identities=24% Similarity=0.199 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...+++++|+++|++++|||++..... .......+.+.||+...+. ..+. ...++|+..+..+...|+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~~------~~v~-~~C~~~~~al~~A~~~l~ 129 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAAA------FDIN-AACAGFLYGLETANGLIT 129 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCcE------EEEC-ccchHHHHHHHHHHHHHH
Confidence 478999999999999999998864322 2334555678899853221 1122 123344556666666676
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
.+..++.|
T Consensus 130 ~g~~~~~L 137 (325)
T PRK12879 130 SGLYKKVL 137 (325)
T ss_pred cCCCCEEE
Confidence 55445444
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=90.95 E-value=1.2 Score=44.14 Aligned_cols=42 Identities=24% Similarity=0.178 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccc----hHHHHHHHHHhCCC
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAF----SVVAIANQKLLGLD 345 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~----~~~~~~~~e~lg~~ 345 (404)
..+|++++|+++|++++|||++...... ......+.+.||+.
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~ 145 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT 145 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC
Confidence 3689999999999999999988753221 12345577889986
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=90.64 E-value=2.4 Score=41.70 Aligned_cols=54 Identities=20% Similarity=0.162 Sum_probs=35.7
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEe
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~ 66 (404)
+.++|.|++...-.......++.....-...|+++||+++|++++|||.+-+-.
T Consensus 225 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d 278 (375)
T cd00829 225 RPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYD 278 (375)
T ss_pred CCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 468899988764433222111112334456899999999999999999876533
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=90.63 E-value=0.33 Score=37.18 Aligned_cols=75 Identities=19% Similarity=0.087 Sum_probs=43.8
Q ss_pred HHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceee----EcccCCcHHHHHHHHHHHHHcCCCCeEEEe
Q 015576 49 LKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT----INKVCSSGMKAVMLAAQSIQLGINDIVVAG 124 (404)
Q Consensus 49 L~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~----v~~aCas~~~al~~A~~~I~aG~~~~vLv~ 124 (404)
|+++|++++|||.++.-+.. ......+...+|+++.....+ =+.+|++...+|..+...=+-..-|.+|++
T Consensus 1 L~~~g~~~~did~~i~hq~~-----~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS-----KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS-----HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCC-----HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 68999999999998874442 234556888899975322221 135566666677666652222345788887
Q ss_pred cccc
Q 015576 125 GMES 128 (404)
Q Consensus 125 g~e~ 128 (404)
+.-.
T Consensus 76 ~~G~ 79 (90)
T PF08541_consen 76 GFGA 79 (90)
T ss_dssp EEET
T ss_pred EEEh
Confidence 7653
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.93 Score=44.21 Aligned_cols=78 Identities=21% Similarity=0.262 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+|++++|+++|++++|||++.+..+. ......+.+.||+....... .+. ...++++..+..+...++
T Consensus 55 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~-----dv~-~~C~~~~~aL~~A~~~i~ 128 (347)
T PRK04262 55 AVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAA-----DLE-FACKAGTAALQAAMGLVK 128 (347)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEE-----EHH-HhHHHHHHHHHHHHHHHH
Confidence 3689999999999999999998643221 12233456889986421111 111 123344556666666676
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
.+..++.|+
T Consensus 129 sg~~~~aLV 137 (347)
T PRK04262 129 SGMIKYALA 137 (347)
T ss_pred cCCCCEEEE
Confidence 655666653
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=90.46 E-value=1.7 Score=41.70 Aligned_cols=76 Identities=22% Similarity=0.170 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...+++++|+++|++++|||.+.+... .......+.+.+|+...+... +. ...++|+..+..+...++
T Consensus 56 a~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~~~~------v~-~~Casg~~al~~A~~~i~ 128 (319)
T PRK09352 56 ATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAAAFD------LS-AACSGFVYALSTADQFIR 128 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCcEee------cc-ccchhHHHHHHHHHHHHH
Confidence 468999999999999999998865322 223344567889985423211 11 224566667777777777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....+..|
T Consensus 129 ~g~~~~vL 136 (319)
T PRK09352 129 SGAYKNVL 136 (319)
T ss_pred cCCCCEEE
Confidence 65444443
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=89.96 E-value=1.6 Score=42.78 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeec-----ccchHHHHHHHHHhCCCC
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDP 346 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~h-----d~~~~~~~~~~e~lg~~~ 346 (404)
...|++++|+++|++++|||++.+. ...+.....+.+.||+.+
T Consensus 64 a~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~ 111 (353)
T PRK12880 64 GKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSS 111 (353)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC
Confidence 3789999999999999999999754 334556777788999864
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=89.73 E-value=0.96 Score=45.06 Aligned_cols=78 Identities=15% Similarity=0.104 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..++++++|+++||+++|||.+.+-..+ ........+.+|+...+.. .=+..++||+..+..+...++
T Consensus 31 ~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~~~-------~v~~~c~sg~~ai~~A~~~I~ 103 (398)
T PRK06157 31 MVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIPVT-------RVENFCATGSEAFRGAVYAVA 103 (398)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCCEE-------EEecccHHHHHHHHHHHHHHH
Confidence 4689999999999999999988653211 1122456778998643221 113457789999999999999
Q ss_pred hcCCceeEEe
Q 015576 379 HKKGKYGVGG 388 (404)
Q Consensus 379 ~~~~~~gl~~ 388 (404)
....+..|+.
T Consensus 104 sG~~d~vlv~ 113 (398)
T PRK06157 104 SGAYDIALAL 113 (398)
T ss_pred CCCCCEEEEE
Confidence 8766666543
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=89.18 E-value=0.59 Score=37.95 Aligned_cols=100 Identities=20% Similarity=0.124 Sum_probs=52.1
Q ss_pred EEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCCC---Ccc
Q 015576 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPN---SVV 91 (404)
Q Consensus 16 ~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~~---~~~ 91 (404)
.|.|++.+.-+.+.......+... ..+++++||+++++++++||.|..-. .+.. .+..=..-+...++-.. ..+
T Consensus 3 ~i~g~~~~~dg~~~~~~~~p~~~~-~~~~i~~al~~agi~~~~I~~i~~hg-~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 3 VIRGYGVNSDGARSSSLTAPNGAA-LARAIRRALADAGISPEDIDYIEAHG-TGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp EEEEEEEEE-SSSTSSSSSTTHHH-HHHHHHHHHHHHTS-GGGEEEEE-----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred EEEEEEEECCCCCCCCCcCcCHHH-HHHHHHHHHhhhccccccceeeeeec-cccccchhhhhhhhhhhhcccccccccc
Confidence 356666655442322233334444 47889999999999999998866422 1211 11111222333333210 122
Q ss_pred eee-----EcccCCcHHHHHHHHHHHHHcCC
Q 015576 92 CTT-----INKVCSSGMKAVMLAAQSIQLGI 117 (404)
Q Consensus 92 ~~~-----v~~aCas~~~al~~A~~~I~aG~ 117 (404)
... =...+++++..|..+..+++.|.
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ 111 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGT 111 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTE
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCC
Confidence 211 12456889999999999998874
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=89.17 E-value=1.8 Score=42.37 Aligned_cols=42 Identities=31% Similarity=0.358 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCCCCCcceEeeccc----chHHHHHHHHHhCCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDP 346 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~----~~~~~~~~~e~lg~~~ 346 (404)
.+|++++|+++|++++|||++....+ .+.....+.+.||+.+
T Consensus 90 ~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~ 135 (361)
T cd00831 90 EEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRP 135 (361)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCc
Confidence 68999999999999999999875322 2234456778899864
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=89.07 E-value=1.7 Score=41.97 Aligned_cols=43 Identities=28% Similarity=0.256 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCC
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDP 346 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~ 346 (404)
..+|++++|+++|++++|||++..... .+...-.+.+.||+..
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~ 103 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQH 103 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCC
Confidence 368999999999999999998865321 2344555678899865
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=88.97 E-value=1.5 Score=43.36 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCC-CC-cCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQ-VNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~-~~-vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
..+|++++|+++|++++|||.+.+...+ ........+.+|+.. .+ +++ +..+++|+..+..+...
T Consensus 26 a~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v--------~~~c~s~~~al~~A~~~ 97 (386)
T cd00751 26 GAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV--------NRVCGSGLQAVALAAQS 97 (386)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh--------ccccHHHHHHHHHHHHH
Confidence 3689999999999999999988753221 222333567789864 22 221 23456777788888888
Q ss_pred HHhcCCceeEE
Q 015576 377 LRHKKGKYGVG 387 (404)
Q Consensus 377 l~~~~~~~gl~ 387 (404)
++....+..|+
T Consensus 98 I~sG~~~~vLv 108 (386)
T cd00751 98 IAAGEADVVVA 108 (386)
T ss_pred HHCCCCCeEEE
Confidence 88665566664
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=88.24 E-value=2 Score=41.17 Aligned_cols=76 Identities=22% Similarity=0.148 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...+++++|+++|++++|||.+..... +......+.+.||+...+... . ....++|+..+..+...++
T Consensus 55 a~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~~~~------v-~~~C~s~~~al~~A~~~i~ 127 (318)
T TIGR00747 55 GFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIPAFD------L-SAACAGFIYALSVAKQYIE 127 (318)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCcEee------h-hhhhHHHHHHHHHHHHHHH
Confidence 468999999999999999998875322 233445577889986422211 1 1223455556666667776
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
.+..++.|
T Consensus 128 ~g~~~~~L 135 (318)
T TIGR00747 128 SGKYKTVL 135 (318)
T ss_pred cCCCCEEE
Confidence 55444443
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=87.96 E-value=1.8 Score=42.90 Aligned_cols=76 Identities=16% Similarity=0.173 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCC-CCc-CCCCCccccCCcccchHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQV-NAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~-~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
..++++++|+++|++++|||.+.+...+ ..........+|+.. .+. ++ +..+++|+..+..+...
T Consensus 25 a~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v--------~~~Casg~~al~~A~~~ 96 (386)
T TIGR01930 25 GAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTV--------NRQCASGLQAVILAAQL 96 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeee--------cchhhHHHHHHHHHHHH
Confidence 3789999999999999999998753321 222334567788864 222 21 13456777788888888
Q ss_pred HHhcCCceeEE
Q 015576 377 LRHKKGKYGVG 387 (404)
Q Consensus 377 l~~~~~~~gl~ 387 (404)
++....++.|+
T Consensus 97 I~sG~~~~vLv 107 (386)
T TIGR01930 97 IRAGEADVVVA 107 (386)
T ss_pred HHCCCCCEEEE
Confidence 88765566664
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.86 E-value=1.7 Score=43.26 Aligned_cols=76 Identities=16% Similarity=0.224 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccch-----HHHHHHHHHhCCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAFS-----VVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~~-----~~~~~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+++++|+++|++++|||.+.+-..+. .........+|++. .|... + +...+||+..+..+...++
T Consensus 31 ~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~------V-~~~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 31 GIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTET------V-NKVCASGLRAVTLADQIIR 103 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceee------h-hhhhhHHHHHHHHHHHHHH
Confidence 6899999999999999999987643321 22223456788752 22211 1 2345688888888988888
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
....+..|+
T Consensus 104 sG~~d~vLv 112 (393)
T PRK08235 104 AGDASVIVA 112 (393)
T ss_pred CCCCCEEEE
Confidence 766666554
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=87.81 E-value=2.4 Score=41.98 Aligned_cols=89 Identities=18% Similarity=0.221 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeec-----ccchHHHHHHHHHhCCCCC--CcCCCCCccccCCcccch-HHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCS-GARILVTLLG 375 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~h-----d~~~~~~~~~~e~lg~~~~--~vn~~Gg~~~~Gh~~gas-G~~~l~~~~~ 375 (404)
...|++++|+++ +++|||.+.+- +........+.+.||+.+. .+.+ ..+|+ |...+..+..
T Consensus 53 a~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv---------~~aC~gg~~aL~~A~~ 121 (379)
T TIGR01835 53 AASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFEL---------KQACYGATAALQMAKG 121 (379)
T ss_pred HHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEe---------ccccHHHHHHHHHHHH
Confidence 478999999998 89999998753 3334566777888998642 1221 11223 3344555555
Q ss_pred HHHhcCCceeEEeee-------------ccccceeeeEEEe
Q 015576 376 VLRHKKGKYGVGGIC-------------NGGGGASALVLEL 403 (404)
Q Consensus 376 ~l~~~~~~~gl~~~~-------------~~gG~~~a~ll~~ 403 (404)
.++....++.|+..+ ..|..++|+||+.
T Consensus 122 ~i~s~~~~~aLVv~~D~a~~~~~~~~~~~~GdGA~A~Ll~~ 162 (379)
T TIGR01835 122 HVALSPDRKVLVIASDIAKYGLESPGEPTQGAGAVAMLVSA 162 (379)
T ss_pred HHHcCCCCeEEEEEeehhhcccCCCCCccccCccEEEEEec
Confidence 555555566653322 2344667788763
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.77 E-value=1.8 Score=43.28 Aligned_cols=76 Identities=13% Similarity=0.146 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+++++|+++|++++|||.+.+-..+ ..........+|+.. .|... + +...+||+..+..+...++
T Consensus 31 ~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~------V-~~~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 31 ATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQ------L-DRRCGSGLQAVITAAMQVQ 103 (404)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceee------h-hhhhhHHHHHHHHHHHHHH
Confidence 689999999999999999998753221 122334567788763 22211 1 2346788888889999998
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
....+..|+
T Consensus 104 sG~~d~vLv 112 (404)
T PRK06205 104 TGAADVVIA 112 (404)
T ss_pred cCCCCEEEE
Confidence 766665554
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=86.84 E-value=5.4 Score=38.24 Aligned_cols=79 Identities=14% Similarity=-0.083 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCC---C-CcceeeEcccCCcHHHHHHHHHHHH
Q 015576 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP---N-SVVCTTINKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~---~-~~~~~~v~~aCas~~~al~~A~~~I 113 (404)
.+...++++++|+++|++++|||.+++-...................+.. . ......=+..++++...|..+....
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~ 283 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLML 283 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHH
Confidence 45566899999999999999999988655433222221111122222211 0 0111122355677888888888888
Q ss_pred HcC
Q 015576 114 QLG 116 (404)
Q Consensus 114 ~aG 116 (404)
+.+
T Consensus 284 ~~~ 286 (332)
T cd00825 284 EHG 286 (332)
T ss_pred hcC
Confidence 877
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=86.81 E-value=2.4 Score=42.21 Aligned_cols=77 Identities=16% Similarity=0.243 Sum_probs=51.7
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccch------HHHHHHHHHhCCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAFS------VVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~~------~~~~~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
.++++++|+++|++++|||.+.+-..+. .......+.+|+.. .|... + +...+||+..+..+...+
T Consensus 32 ~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~------V-~~aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 32 ATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFN------V-NRLCGSGLQAIVSAAQAI 104 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEE------e-cccchHHHHHHHHHHHHH
Confidence 6899999999999999999987643221 12333456678863 23211 1 234567888888888888
Q ss_pred HhcCCceeEEe
Q 015576 378 RHKKGKYGVGG 388 (404)
Q Consensus 378 ~~~~~~~gl~~ 388 (404)
+....+..|+.
T Consensus 105 ~sG~~d~vLvv 115 (394)
T PRK09051 105 LLGDADVAIGG 115 (394)
T ss_pred HcCCCCEEEEE
Confidence 87666666653
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.78 E-value=2.1 Score=43.03 Aligned_cols=75 Identities=12% Similarity=0.038 Sum_probs=52.5
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCC-CC-cCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQ-VNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~-~~-vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
..+++++|+++|++++|||.+.+...+ ........+.+|+.. .| ++++ ..++||+..+..+...+
T Consensus 32 ~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~--------~~CaSg~~al~~A~~~I 103 (426)
T PRK08170 32 VAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ--------RNCASGMQALDSAAANI 103 (426)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc--------chhhHHHHHHHHHHHHH
Confidence 689999999999999999988764332 122234567889853 22 3332 23678888888898999
Q ss_pred HhcCCceeEE
Q 015576 378 RHKKGKYGVG 387 (404)
Q Consensus 378 ~~~~~~~gl~ 387 (404)
+....++.|+
T Consensus 104 ~sG~~d~vLv 113 (426)
T PRK08170 104 ALGRADLVLA 113 (426)
T ss_pred HCCCCCEEEE
Confidence 8766666654
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=86.71 E-value=4.5 Score=38.65 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=47.3
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCC-cCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQ-VNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~-vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
-...+++++|+++|++++|||.+.+-.. .......+.+.+|+...+ +.++ ...++|+..+..+...
T Consensus 51 l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~~~~~~~v~--------~~C~s~~~al~~A~~~ 122 (324)
T cd00827 51 MAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAEAFDLK--------QACYGGTAALQLAANL 122 (324)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCCCCceeehh--------hhhHHHHHHHHHHHHH
Confidence 3478999999999999999999975321 223445567888985211 2111 1123455666667677
Q ss_pred HHhcCCceeE
Q 015576 377 LRHKKGKYGV 386 (404)
Q Consensus 377 l~~~~~~~gl 386 (404)
++.+..++.|
T Consensus 123 i~~g~~~~vl 132 (324)
T cd00827 123 VESGPWRYAL 132 (324)
T ss_pred HHcCCCCEEE
Confidence 7765445444
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=86.57 E-value=2.9 Score=42.38 Aligned_cols=95 Identities=9% Similarity=0.087 Sum_probs=61.2
Q ss_pred EEEEeeEEeccCCC-------cc-ccchHHHHHHHHHHcCCCCCCcceEeeccc---c---hHHHHHHHHHhCCCC-CC-
Q 015576 285 AKIRGFADAAQAPE-------WF-TTAPSLAIPKAIANAGLEASQIDYYEINEA---F---SVVAIANQKLLGLDP-EQ- 348 (404)
Q Consensus 285 ~~i~g~~~~~~~~~-------~~-~~~~~~a~~~al~~agl~~~dId~~~~hd~---~---~~~~~~~~e~lg~~~-~~- 348 (404)
+.|.|.+.+.-... .. ..-..++++++|+++|++++|||.+.+-.. + ........+.+|+.. .|
T Consensus 48 V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa 127 (452)
T PLN02287 48 VVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPV 127 (452)
T ss_pred EEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcce
Confidence 67888876532221 11 112368999999999999999998864222 1 112233556678864 22
Q ss_pred cCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEE
Q 015576 349 VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (404)
Q Consensus 349 vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~ 387 (404)
+++ +..++||+..+..+...++.+..+..|+
T Consensus 128 ~~V--------~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv 158 (452)
T PLN02287 128 RTV--------NRQCSSGLQAVADVAAAIKAGFYDIGIG 158 (452)
T ss_pred EEE--------eccCchHHHHHHHHHHHHHcCCCCeEEE
Confidence 121 3457789999999999999776666665
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.33 E-value=2.5 Score=42.17 Aligned_cols=77 Identities=14% Similarity=0.091 Sum_probs=53.3
Q ss_pred HHHHHHHHHHc-CCCCCCcceEeeccc----c--hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANA-GLEASQIDYYEINEA----F--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 305 ~~a~~~al~~a-gl~~~dId~~~~hd~----~--~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
.++++++|+++ |++++|||.+.+-.. + ......+.+.+|+...|.. .-+..++||...+..+...+
T Consensus 32 ~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p~~-------~v~~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 32 AQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLPGT-------TVNRYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCCee-------eeeccchhHHHHHHHHHHHH
Confidence 68999999996 999999998864321 1 1122346688998542221 11345788998999999999
Q ss_pred HhcCCceeEEe
Q 015576 378 RHKKGKYGVGG 388 (404)
Q Consensus 378 ~~~~~~~gl~~ 388 (404)
+.+..+..|+.
T Consensus 105 ~sG~~d~vLv~ 115 (406)
T PRK07851 105 KAGEGDVFISA 115 (406)
T ss_pred HCCCCCEEEEe
Confidence 98766666643
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.00 E-value=2.4 Score=42.10 Aligned_cols=75 Identities=16% Similarity=0.153 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCC-CCc-CCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDP-EQV-NAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~-~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
..+++++|+++|++++|||.+.+-.. .........+.+|++. .|. ++ +...+||+..+..+...+
T Consensus 31 ~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V--------~~~Casg~~ai~~A~~~I 102 (393)
T PRK05656 31 AAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTL--------NKVCGSGLKALHLAAQAI 102 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEe--------cccchhHHHHHHHHHHHH
Confidence 68999999999999999998876322 1122334567789764 222 22 244667888888888888
Q ss_pred HhcCCceeEE
Q 015576 378 RHKKGKYGVG 387 (404)
Q Consensus 378 ~~~~~~~gl~ 387 (404)
+....+..|+
T Consensus 103 ~sG~~d~vLv 112 (393)
T PRK05656 103 RCGDAEVIIA 112 (393)
T ss_pred HcCCCCEEEE
Confidence 8766666665
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.79 E-value=2.6 Score=41.85 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-------chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-------FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-------~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
..++++++|+++|++++|||.+.+... .......+.+.+|+...+... . +...+||...+..+...
T Consensus 26 a~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~~~~------v-~~aCasg~~ai~~A~~~ 98 (389)
T PRK06064 26 AVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIPATR------V-EAACASGGAALRQAYLA 98 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCCeeE------E-eCCcHHHHHHHHHHHHH
Confidence 468999999999999999998875332 122334456778885333211 1 23356778888889889
Q ss_pred HHhcCCceeEEe
Q 015576 377 LRHKKGKYGVGG 388 (404)
Q Consensus 377 l~~~~~~~gl~~ 388 (404)
++....+..|+.
T Consensus 99 I~sG~~~~vLv~ 110 (389)
T PRK06064 99 VASGEADVVLAA 110 (389)
T ss_pred HHCCCCCEEEEE
Confidence 987666666643
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=85.71 E-value=3.2 Score=40.52 Aligned_cols=90 Identities=11% Similarity=-0.124 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCC-CCcce-----eeEcccCCcHHHHHHHHHH
Q 015576 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP-NSVVC-----TTINKVCSSGMKAVMLAAQ 111 (404)
Q Consensus 39 ~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~-~~~~~-----~~v~~aCas~~~al~~A~~ 111 (404)
+=..+++++||+++|+++++||.++.--. ++.. ....+.-+...+|-. ...|. ..=..+.+++...+..+..
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId~v~ah~~-gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~ 312 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMDYRIADLN-GEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALA 312 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEcCCC-CCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHH
Confidence 45568899999999999999998664222 2221 111222233333321 01111 1222445567777777888
Q ss_pred HHHcCC--CCeEEEeccccc
Q 015576 112 SIQLGI--NDIVVAGGMESM 129 (404)
Q Consensus 112 ~I~aG~--~~~vLv~g~e~~ 129 (404)
.++.|. -+.+||.+.+..
T Consensus 313 ~~~~g~~~g~~~L~~s~~d~ 332 (348)
T PRK06147 313 ASRKGYGPGPNVLCHLSDDD 332 (348)
T ss_pred HHHcCcCCCCcEEEEecCCC
Confidence 888884 477888766543
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.22 E-value=3.2 Score=41.22 Aligned_cols=77 Identities=13% Similarity=0.001 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc---ch--HHHHHHHHHhCCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA---FS--VVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~---~~--~~~~~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
..++++++|+++|++++|||.+.+... +. .......+.+|++. .|..+. +..++||+..+..+...+
T Consensus 30 ~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v-------~~~caSg~~av~~Aa~~I 102 (388)
T PRK06366 30 GGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTV-------NVVCASGMLAVESAAREI 102 (388)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceee-------echhhHHHHHHHHHHHHH
Confidence 368999999999999999999876422 11 11233567789864 232211 245788999999999999
Q ss_pred HhcCCceeEE
Q 015576 378 RHKKGKYGVG 387 (404)
Q Consensus 378 ~~~~~~~gl~ 387 (404)
+.+..+..|+
T Consensus 103 ~sG~~d~vla 112 (388)
T PRK06366 103 MLGERDLVIA 112 (388)
T ss_pred hcCCCCEEEE
Confidence 9776666554
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.91 E-value=3.4 Score=41.01 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=49.3
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCC-CC-cCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQ-VNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~-~~-vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
.++++++|+++|++++|||.+.+...+ ..........+|+.. .+ +.+ +..+++|+..+..+...+
T Consensus 31 ~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v--------~~~Casg~~al~~A~~~I 102 (393)
T PRK05790 31 AIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTI--------NKVCGSGLKAVALAAQAI 102 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeee--------cccchHHHHHHHHHHHHH
Confidence 689999999999999999988764321 111122334466652 22 221 234667888888888889
Q ss_pred HhcCCceeEE
Q 015576 378 RHKKGKYGVG 387 (404)
Q Consensus 378 ~~~~~~~gl~ 387 (404)
+....+..|+
T Consensus 103 ~sG~~d~vLv 112 (393)
T PRK05790 103 RAGDADIVVA 112 (393)
T ss_pred HcCCCCEEEE
Confidence 8766666664
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=84.81 E-value=3.2 Score=40.84 Aligned_cols=75 Identities=23% Similarity=0.242 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeec-----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~h-----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...|++++|+++|++++|||.+.+. ..+......+.+.||+....+. + +...++|+..+..+...++
T Consensus 99 a~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~~~~~~-------v-~~aCasg~~al~~A~~~i~ 170 (372)
T PRK07515 99 GVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEGFAFD-------M-NVACSSATFGIQTAANAIR 170 (372)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCCCcEEE-------e-cchhHHHHHHHHHHHHHHH
Confidence 3679999999999999999988653 2233334556788887421111 1 1224455666777777777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
.+..++.|
T Consensus 171 ~g~~~~vL 178 (372)
T PRK07515 171 SGSARRVL 178 (372)
T ss_pred cCCCCEEE
Confidence 65555444
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=84.39 E-value=3.1 Score=41.32 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccch------HHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAFS------VVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~~------~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
...+++++|+++|++++|||.+.+-..+. .......+.+|....|.... +...+||+..+..+...+
T Consensus 27 ~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p~~~V-------~~~Casg~~al~~A~~~I 99 (393)
T cd00826 27 GAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGM-------NNLCGSGLRALALAMQLI 99 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCcEEEe-------cchhHHHHHHHHHHHHHH
Confidence 46788999999999999999887543321 11222456677654332111 234567888888888888
Q ss_pred HhcCCceeEEe
Q 015576 378 RHKKGKYGVGG 388 (404)
Q Consensus 378 ~~~~~~~gl~~ 388 (404)
+....+..|+.
T Consensus 100 ~sG~~~~vlv~ 110 (393)
T cd00826 100 AGGDANCILAG 110 (393)
T ss_pred HCCCCCEEEEE
Confidence 87655655543
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=84.21 E-value=6.9 Score=38.82 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=58.0
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE-EeccCCCCCCcHHHHHHHHCCCCC---
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF-GNVLSANLGQAPARQAALGAGIPN--- 88 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~-g~~~~~~~~~~~a~~i~~~lGl~~--- 88 (404)
..++|.|++.+.-.... ..++... .-..+++++||+++|++++|||.+.. |+.++. .+..=..-+...+|-+.
T Consensus 236 ~~~~I~g~g~~~d~~~~-~~~~~~~-~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~-~D~~E~~al~~~f~~~~pv~ 312 (392)
T PRK09185 236 AAVALLGVGESSDAHHM-SAPHPEG-LGAILAMQQALADAGLAPADIGYINLHGTATPL-NDAMESRAVAAVFGDGVPCS 312 (392)
T ss_pred CcEEEEEEEEeCCCCCC-CCCCCCH-HHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcC-CCHHHHHHHHHHhCCCCcee
Confidence 35788888775333221 1222232 23458899999999999999998553 222221 12222233444444210
Q ss_pred CcceeeEcccCCcHHHHHHHHHHHHHcCCC
Q 015576 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGIN 118 (404)
Q Consensus 89 ~~~~~~v~~aCas~~~al~~A~~~I~aG~~ 118 (404)
......=...+++|+..+..+...++.|..
T Consensus 313 s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~i 342 (392)
T PRK09185 313 STKGLTGHTLGAAGAVEAAICWLALRHGLP 342 (392)
T ss_pred CCCcccccChhhcchHHHHHHHHHHhcCCC
Confidence 011222235577888888888888888753
|
|
| >COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=84.16 E-value=3.8 Score=37.21 Aligned_cols=81 Identities=11% Similarity=0.007 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~ 114 (404)
....+.....+++.|.+++++.+|+|.+.++.--+++.|--.+.-++..|.+..++|.+.|+ ++.++... .+
T Consensus 35 r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvs-----sL~~~A~~---~~ 106 (220)
T COG1214 35 RNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVS-----SLEALAQG---GA 106 (220)
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeC-----HHHHHHHh---hh
Confidence 45667888999999999999999999999988777776654444444444333356778775 44443333 44
Q ss_pred cCCCCeEEE
Q 015576 115 LGINDIVVA 123 (404)
Q Consensus 115 aG~~~~vLv 123 (404)
......++|
T Consensus 107 ~~~~~~v~v 115 (220)
T COG1214 107 EKNAGFVLV 115 (220)
T ss_pred ccCCCceEE
Confidence 444455554
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=83.95 E-value=9.5 Score=37.31 Aligned_cols=103 Identities=13% Similarity=0.044 Sum_probs=57.7
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~-agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~ 91 (404)
+.|+|.|++...- ......++.... .++++++++ +|++++|||.+-+--.+. .......+.||+..+.|
T Consensus 225 ~pv~I~g~~~~~~-~~~~~~~d~~~~----~~~~~a~~~aAgi~~~diD~~Ei~D~F~-----~~~l~~~e~lGl~g~~p 294 (352)
T PRK07937 225 RPAWITGIEHRIE-SPSLGARDLTRS----PSTALAAEAATGGDAGGVDVAELHAPFT-----HQELILREALGLGDKTK 294 (352)
T ss_pred CcEEEEEEEEeeC-CccccccccccH----HHHHHHHHHhcCCCHHHCCEEEEeCCCh-----HHHHHHHHHcCCCCCCC
Confidence 5689999877421 111111222322 333445555 599999999875533221 12223345677632212
Q ss_pred e------eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEec
Q 015576 92 C------TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125 (404)
Q Consensus 92 ~------~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g 125 (404)
. ..-....++|+.-+..+...++.+.++++|+.+
T Consensus 295 vN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~ 334 (352)
T PRK07937 295 VNPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHA 334 (352)
T ss_pred cCCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEec
Confidence 1 111122346888889999999988889988865
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.85 E-value=3.5 Score=40.96 Aligned_cols=76 Identities=8% Similarity=0.065 Sum_probs=52.7
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccch-----HHHHHHHHHhCCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAFS-----VVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~~-----~~~~~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+++++|+++|++++|||.+.+-+.+. .........+|++. .|..+. +...+||+..+..+...++
T Consensus 32 ~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V-------~~~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 32 AHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTI-------NKVCGSGLKSVALAANSIM 104 (392)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhh-------cchhHHHHHHHHHHHHHHH
Confidence 6899999999999999999887643321 12223457788864 333211 3457799999999999999
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
....+..|+
T Consensus 105 sG~~dvvla 113 (392)
T PRK06633 105 TGDNEIVIA 113 (392)
T ss_pred cCCCCEEEE
Confidence 766555443
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=83.59 E-value=5.2 Score=40.53 Aligned_cols=91 Identities=16% Similarity=0.282 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeec-----ccchHHHHHH---HHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIAN---QKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLL 374 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~h-----d~~~~~~~~~---~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~ 374 (404)
...|++++|+++|++++|||.+.+- |.+......+ .+.||...- .++--..+|+|.. .|..+.
T Consensus 57 A~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~~~--------~afDi~~AC~G~~~AL~~A~ 128 (459)
T PLN02577 57 SLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNTDI--------EGVDSTNACYGGTAALLNCV 128 (459)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCCCc--------EEeehhhhhHHHHHHHHHHH
Confidence 4789999999999999999999842 3344433333 355664321 1223333555544 555555
Q ss_pred HHHHhcC--CceeEEeee------------ccccceeeeEEE
Q 015576 375 GVLRHKK--GKYGVGGIC------------NGGGGASALVLE 402 (404)
Q Consensus 375 ~~l~~~~--~~~gl~~~~------------~~gG~~~a~ll~ 402 (404)
..++... +++.|+... ..|..++|+||+
T Consensus 129 ~~i~sg~~~~~~aLVV~aD~a~~~~~~~e~t~GdGA~A~lv~ 170 (459)
T PLN02577 129 NWVESSSWDGRYGLVVAADSAVYAEGPARPTGGAGAVAMLVG 170 (459)
T ss_pred HHHHcCCCCCCeEEEEEechhhccCCCCCCCCCcceEEEEEc
Confidence 6665443 466664432 124466777775
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=83.30 E-value=4.9 Score=39.90 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccc--hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAF--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~--~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~ 381 (404)
...+++++|+++|++++|||.+.+...+ ........+.+|+...|.. .=+..++||...+..+...++...
T Consensus 26 a~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~~~~~~~~lGl~~~~~~-------~v~~~caSg~~ai~~A~~~I~sG~ 98 (391)
T PRK08256 26 AAEAGRAALADAGIDYDAVQQAYVGYVYGDSTSGQRALYEVGMTGIPIV-------NVNNNCSTGSTALFLARQAVRSGA 98 (391)
T ss_pred HHHHHHHHHHHcCCChHHCCeeEEEEEeCCcchhHHHHHHcCCCCCCCc-------ccccccHHHHHHHHHHHHHHHCCC
Confidence 3688999999999999999977542111 1111234566887542221 113456788888999999999876
Q ss_pred CceeEE
Q 015576 382 GKYGVG 387 (404)
Q Consensus 382 ~~~gl~ 387 (404)
.++.|+
T Consensus 99 ~d~vLv 104 (391)
T PRK08256 99 ADCALA 104 (391)
T ss_pred CCEEEE
Confidence 676664
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.14 E-value=4.2 Score=40.39 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCcceEeeccc----c--hHHHHHHHHHhCCCC-CC-cCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEA----F--SVVAIANQKLLGLDP-EQ-VNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~----~--~~~~~~~~e~lg~~~-~~-vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
..+++++|+++|++++|||.+.+-.. . ..........+|++. .| +++ +...+||+..+..+...
T Consensus 32 ~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V--------~~aCaSg~~Al~~A~~~ 103 (392)
T PRK07108 32 GHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTV--------NRFCSSGLQTIALAAQR 103 (392)
T ss_pred HHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeee--------cchhhHHHHHHHHHHHH
Confidence 68999999999999999998875322 1 123344455668753 22 222 34466888889999999
Q ss_pred HHhcCCceeEE
Q 015576 377 LRHKKGKYGVG 387 (404)
Q Consensus 377 l~~~~~~~gl~ 387 (404)
++.+..+..|+
T Consensus 104 I~sG~~d~vla 114 (392)
T PRK07108 104 VIAGEGDVFVA 114 (392)
T ss_pred HHCCCCCEEEE
Confidence 99766665554
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=82.98 E-value=4.2 Score=40.42 Aligned_cols=78 Identities=17% Similarity=0.174 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc---c--hHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA---F--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~---~--~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..++++++|+++|++++|||.+.+... + ........+.+|+... ++.. .. +..++||+..+..+...++
T Consensus 29 ~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~-~p~~----~v-~~~caSg~~av~~Aa~~I~ 102 (394)
T PLN02644 29 GSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPS-TICT----TV-NKVCASGMKAVMLAAQSIQ 102 (394)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCC-CceE----EE-eccchHHHHHHHHHHHHHH
Confidence 368999999999999999999876321 1 1112235677888532 2111 01 3457889989999999999
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
....+..|+
T Consensus 103 sG~~d~vlv 111 (394)
T PLN02644 103 LGINDVVVA 111 (394)
T ss_pred cCCCCEEEE
Confidence 876776664
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.47 E-value=9.3 Score=37.87 Aligned_cols=94 Identities=15% Similarity=0.114 Sum_probs=59.9
Q ss_pred EEEEeeEEeccCC---C-ccccchHHHHHHHHHHcC-CCC-CCcceEeec--ccch---HHHHHHHHHhCCCCCCcCCCC
Q 015576 285 AKIRGFADAAQAP---E-WFTTAPSLAIPKAIANAG-LEA-SQIDYYEIN--EAFS---VVAIANQKLLGLDPEQVNAHG 353 (404)
Q Consensus 285 ~~i~g~~~~~~~~---~-~~~~~~~~a~~~al~~ag-l~~-~dId~~~~h--d~~~---~~~~~~~e~lg~~~~~vn~~G 353 (404)
+.|.|.+.+.-.. . ....-..++++++|+.+| +++ +|||.+.+. +.+. .......+.+|+...|...
T Consensus 6 vaIvG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~-- 83 (385)
T PRK06066 6 VAIVGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRPTMT-- 83 (385)
T ss_pred EEEEEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCCeEE--
Confidence 5788888764321 1 112334789999999999 997 799987653 2221 1222345778875433211
Q ss_pred CccccCCcccchHHHHHHHHHHHHHhcCCceeEEe
Q 015576 354 GAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (404)
Q Consensus 354 g~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~ 388 (404)
. +++|...+..+...++...-+..|+.
T Consensus 84 ----v----~~sg~~a~~~A~~aV~sG~~d~vLv~ 110 (385)
T PRK06066 84 ----V----AGDGLQGLAHAVMHINSGLANVVVVE 110 (385)
T ss_pred ----E----eCcHHHHHHHHHHHHHcCCCCEEEEE
Confidence 1 56787888889999987766666643
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=82.38 E-value=4.8 Score=40.49 Aligned_cols=76 Identities=7% Similarity=0.094 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc---h--HHHHHHHHHhCCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF---S--VVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~---~--~~~~~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+++++|+++|++++|||.+.+-..+ . .........+|++. .|..+. +...+||+..+..+...++
T Consensus 34 ~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV-------~~aCaSG~~Ai~~Aa~~I~ 106 (428)
T PRK08963 34 KMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSV-------SRACATSFQAVANVAESIM 106 (428)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceee-------hhhhHHHHHHHHHHHHHHH
Confidence 689999999999999999988754321 1 11223556678863 333221 2457789999999999999
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
....+..|+
T Consensus 107 sG~~dvvLv 115 (428)
T PRK08963 107 AGTIDIGIA 115 (428)
T ss_pred CCCCCEEEE
Confidence 766655553
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.08 E-value=4.9 Score=40.01 Aligned_cols=76 Identities=26% Similarity=0.220 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc---hHHHHHHHHHh--CCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF---SVVAIANQKLL--GLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~---~~~~~~~~e~l--g~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+++++|+++|++++|||.+.+-..+ ..........+ |++. .|.. .+ +...+||+..+..+...++
T Consensus 36 ~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~------~V-~~aCaSG~~Av~~A~~~I~ 108 (397)
T PRK06954 36 AAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCT------TV-NKMCGSGMRAAMFAHDMLV 108 (397)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEe------ec-cccchHHHHHHHHHHHHHH
Confidence 789999999999999999988753221 11111111233 4432 1211 11 3446788889999999999
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
.+..+..|+
T Consensus 109 sG~~d~vLv 117 (397)
T PRK06954 109 AGSVDVIVA 117 (397)
T ss_pred CCCCCEEEE
Confidence 766665554
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.37 E-value=6.4 Score=39.25 Aligned_cols=76 Identities=18% Similarity=0.167 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHc-CCCCCCcceEeecccc------hHHHHHHHHHhCCCC-CCc-CCCCCccccCCcccchHHHHHHHHH
Q 015576 304 PSLAIPKAIANA-GLEASQIDYYEINEAF------SVVAIANQKLLGLDP-EQV-NAHGGAVSLGHPLGCSGARILVTLL 374 (404)
Q Consensus 304 ~~~a~~~al~~a-gl~~~dId~~~~hd~~------~~~~~~~~e~lg~~~-~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~ 374 (404)
...+++++|+++ |++++|||.+.+-.++ ..........+|+.. -|. ++ +...+||+..+..+.
T Consensus 35 a~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V--------~~aCaSg~~Al~~A~ 106 (399)
T PRK09052 35 LAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTV--------NRFCASGLQAVAMAA 106 (399)
T ss_pred HHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeee--------cchhhHHHHHHHHHH
Confidence 368999999997 9999999988653222 111222334457753 221 11 344678888999999
Q ss_pred HHHHhcCCceeEE
Q 015576 375 GVLRHKKGKYGVG 387 (404)
Q Consensus 375 ~~l~~~~~~~gl~ 387 (404)
..++....+..|+
T Consensus 107 ~~I~sG~~d~vLv 119 (399)
T PRK09052 107 DRIRVGEADVMIA 119 (399)
T ss_pred HHHHCCCCCEEEE
Confidence 9999766666554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 404 | ||||
| 2ib7_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 1e-93 | ||
| 2ibu_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 1e-92 | ||
| 2f2s_A | 406 | Human Mitochondrial Acetoacetyl-Coa Thiolase Length | 4e-92 | ||
| 4e1l_A | 395 | Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla | 4e-87 | ||
| 4dd5_A | 396 | Biosynthetic Thiolase (Thla1) From Clostridium Diff | 1e-81 | ||
| 1wl4_A | 397 | Human Cytosolic Acetoacetyl-Coa Thiolase Complexed | 2e-73 | ||
| 2vu2_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Wit | 4e-71 | ||
| 1dlu_A | 389 | Unliganded Biosynthetic Thiolase From Zoogloea Rami | 5e-71 | ||
| 2wkv_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-70 | ||
| 2wku_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h M | 2e-70 | ||
| 1m1t_A | 392 | Biosynthetic Thiolase, Q64a Mutant Length = 392 | 3e-70 | ||
| 2wl5_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-70 | ||
| 1m1o_A | 392 | Crystal Structure Of Biosynthetic Thiolase, C89a Mu | 4e-70 | ||
| 2wl4_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 5e-70 | ||
| 1qfl_A | 389 | Biosynthetic Thiolase From Zoogloea Ramigera In Com | 6e-70 | ||
| 3ss6_A | 394 | Crystal Structure Of The Bacillus Anthracis Acetyl- | 7e-70 | ||
| 2wl4_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 8e-70 | ||
| 1m4s_A | 392 | Biosynthetic Thiolase, Cys89 Acetylated, Unliganded | 8e-70 | ||
| 2wl6_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h-H | 1e-69 | ||
| 2wl5_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 6e-69 | ||
| 2wl4_B | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 8e-69 | ||
| 2wl4_D | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-68 | ||
| 2wkt_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 4e-67 | ||
| 2wkt_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 7e-66 | ||
| 1ulq_A | 401 | Crystal Structure Of Tt0182 From Thermus Thermophil | 7e-57 | ||
| 2iik_A | 418 | Crystal Structure Of Human Peroxisomal Acetyl-Coa A | 2e-55 | ||
| 2wu9_A | 442 | Crystal Structure Of Peroxisomal Kat2 From Arabidop | 1e-52 | ||
| 2c7y_A | 404 | Plant Enzyme Length = 404 | 1e-52 | ||
| 2wua_A | 440 | Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas | 2e-52 | ||
| 1wdk_C | 390 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 2e-50 | ||
| 1pxt_A | 390 | The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac | 8e-50 | ||
| 1afw_A | 393 | The 1.8 Angstrom Crystal Structure Of The Dimeric P | 9e-50 | ||
| 3goa_A | 387 | Crystal Structure Of The Salmonella Typhimurium Fad | 7e-40 | ||
| 3svk_A | 407 | Crystal Structure Of Acetyl-Coa Acetyltransferase F | 5e-38 |
| >pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406 | Back alignment and structure |
|
| >pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395 | Back alignment and structure |
|
| >pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396 | Back alignment and structure |
|
| >pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397 | Back alignment and structure |
|
| >pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392 | Back alignment and structure |
|
| >pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389 | Back alignment and structure |
|
| >pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389 | Back alignment and structure |
|
| >pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394 | Back alignment and structure |
|
| >pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392 | Back alignment and structure |
|
| >pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401 | Back alignment and structure |
|
| >pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418 | Back alignment and structure |
|
| >pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442 | Back alignment and structure |
|
| >pdb|2C7Y|A Chain A, Plant Enzyme Length = 404 | Back alignment and structure |
|
| >pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440 | Back alignment and structure |
|
| >pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390 | Back alignment and structure |
|
| >pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390 | Back alignment and structure |
|
| >pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393 | Back alignment and structure |
|
| >pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387 | Back alignment and structure |
|
| >pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 643 bits (1660), Expect = 0.0
Identities = 198/399 (49%), Positives = 270/399 (67%), Gaps = 6/399 (1%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
+ ++V IV RTP+G FLGSLS + ATKLGSIAI+ A+++A + V+E + GN
Sbjct: 2 ASKPTLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGN 61
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VL GQAP RQA LGAG+P S CTTINKVC+SGMKA+M+A+QS+ G D++VAGGM
Sbjct: 62 VLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGM 121
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSN P + R + G + D ++KDGL DVYN MG CAE A K I R+EQ
Sbjct: 122 ESMSNVPYVM--NRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQ 179
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D+YAI S+ R AA +G F E+ PV + + +G+P ++V +DE ++ D +K+ KL+
Sbjct: 180 DAYAINSYTRSKAAWEAGKFGNEVIPVTV-TVKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238
Query: 247 F-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
F KE G+VTA NAS ++DGAAALVL++ A L + +A+I FADAA P F AP
Sbjct: 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPV 298
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
A + + GL+ I +E+NEAFS+V +AN K+L +DP++VN +GGAVSLGHP+G S
Sbjct: 299 YAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMS 358
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GARI+ L L K+G+YG+ ICNGGGGASA++++ +
Sbjct: 359 GARIVGHLTHAL--KQGEYGLASICNGGGGASAMLIQKL 395
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 565 bits (1458), Expect = 0.0
Identities = 176/397 (44%), Positives = 238/397 (59%), Gaps = 6/397 (1%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
+ + V IV ART +G F G+L++V LGS I+ LKRA V P V EV FG+VL
Sbjct: 2 NAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVL 61
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+A GQ P RQA++GAGIP SV + +C SG+KAV LA QSI +G + IVVAGGME+
Sbjct: 62 AAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMEN 121
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MS AP +LA R G ++G + D +L DGL D +++ MG+ AE A K ++R++QD
Sbjct: 122 MSKAP-HLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDK 180
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSF 247
A+ S R AQ +G F EI PV +S+ +G I V DE + + KL+P F
Sbjct: 181 VAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL--IEVKTDEFPRHGSNIEAMSKLKPYF 238
Query: 248 KE--GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
G+VT NAS I+DGAAA+VL+ +A + GL +A+I ++ P P
Sbjct: 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPI 298
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
AI +A+ AG +D +EINEAF+ V+ A K LGL+PE+VN GGA++LGHPLG S
Sbjct: 299 PAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGAS 358
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
G RILVTLL L GV +C GGG A+ ++
Sbjct: 359 GCRILVTLLHTLERMGRSRGVAALCIGGGMGIAMCVQ 395
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 549 bits (1417), Expect = 0.0
Identities = 183/392 (46%), Positives = 250/392 (63%), Gaps = 4/392 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RTP+G F G + SA +LG+IA++ A+ R + + EV GNVL L
Sbjct: 5 KDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL 64
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ ARQ A+ AGIPNSV T+NK+C SG+K+V LAAQSI G ND+V+AGG E+MS A
Sbjct: 65 GQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQA 124
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P + AR GS++G+ T+VD ML DGL D +N + MG+ AE A K TR+ QD A+
Sbjct: 125 PYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALE 184
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDA--AKLMKLRPSFKEG 250
S + A + F EI PV++ RGK +DKDE K L KL+P+FK+
Sbjct: 185 SQNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYP-KLGMTFEGLSKLKPAFKKD 242
Query: 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPK 310
G+VTAGNAS I+DGAA L+L+S KA ELG++ +AKI+ +A A PE T P A K
Sbjct: 243 GTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRK 302
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARIL 370
A+ AGL + ID E NEAF+ A+A + L +D ++N +GGA++LGHP+G SGARIL
Sbjct: 303 ALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARIL 362
Query: 371 VTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
VTL+ ++ +K + G+ +C GGG ++V+
Sbjct: 363 VTLIYEMQKRKVETGLATLCIGGGQGISMVVS 394
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 539 bits (1392), Expect = 0.0
Identities = 163/393 (41%), Positives = 229/393 (58%), Gaps = 4/393 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ I ART +G F G+ ++ A +LG+ I L+RA V V EV G VL A
Sbjct: 3 PSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE 62
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAA+ AG+P +N++C SG++AV L Q I G I+VAGGMESMS A
Sbjct: 63 GQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P + A R G ++G ++D M+KDGL D + + MG AE A + ++RDEQD++A+
Sbjct: 123 P-HCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGG 251
S + AAQ G F EI P + +G I VD DE + + KLRP+F + G
Sbjct: 182 SQNKAEAAQKDGRFKDEIVPFIVKGRKGD--ITVDADEYIRHGATLDSMAKLRPAFDKEG 239
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
+VTAGNAS ++DGAAA +L+S +A G+Q + +I +A P+ T P A KA
Sbjct: 240 TVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKA 299
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
+ AG + +D E NEAF+ A A K LG DP VN +GGA+++GHP+G SGARIL
Sbjct: 300 LERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILN 359
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
TLL ++ + + G+ +C GGG A+ +E +
Sbjct: 360 TLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 526 bits (1358), Expect = 0.0
Identities = 176/392 (44%), Positives = 246/392 (62%), Gaps = 5/392 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
R+V I ART +G F G+ SVSA +LG A + A+KRAN+ P ++ E G VL+A L
Sbjct: 7 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL 66
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ ARQ ALGAGIP TIN VC SG+++V +A+Q I LG DI++ GG E+MS +
Sbjct: 67 GQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMS 126
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P + AR G+R+G VD M+KDGL D++N++ MG+ AE A + ITR+EQD A+
Sbjct: 127 PYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALA 186
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDA--AKLMKLRPSFKEG 250
S + AQ G F EI PV + +G +VDKDE + K KL KLRP+FK+
Sbjct: 187 SQNKAEKAQAEGKFDEEIVPVVIKGRKGDT--VVDKDEYI-KPGTTMEKLAKLRPAFKKD 243
Query: 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPK 310
G+VTAGNAS I+DGAA LV+++ KA ELG++ +A I + A P+ P A K
Sbjct: 244 GTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKK 303
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARIL 370
A+ A + ID E NEAF+ ++A + L +D +VN +GGA+++GHP+GCSGARIL
Sbjct: 304 ALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARIL 363
Query: 371 VTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
TLL ++ + K G+ +C GGG + L+++
Sbjct: 364 TTLLYEMKRRDAKTGLATLCIGGGMGTTLIVK 395
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 486 bits (1254), Expect = e-172
Identities = 162/396 (40%), Positives = 234/396 (59%), Gaps = 6/396 (1%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
S +V I R+P+G F G+L +V+ +L ++ A+KR V+P V EV G+ +
Sbjct: 1 SNAMHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCI 60
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
AR AAL AG P++V TI + CSSGM+A+M AA IQLG++++VVAGG+E+
Sbjct: 61 QRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEA 120
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MS++P L + R G RL H I D + + L D + MG AE ++ ITR+EQD
Sbjct: 121 MSSSPYALKQHRWGQRLQHGEIRD-TVWEVLEDPIHHIMMGETAENLVEQYEITREEQDE 179
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRPS 246
A+RS + A SG F +I P+ + R + ++ KDE + D A KL L+P+
Sbjct: 180 VALRSHTLALKAIESGYFDDQIVPITIKERRKE--VVFSKDEHP-RADITAEKLAGLKPA 236
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
F++ GSVTAGNAS ++DG+A LVL+S KA E GLQ +A+I G++ A P+ P+
Sbjct: 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAP 296
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSG 366
AI K + D EINEAF+ +A +K L LD E+VN +G V LGHP+GC+G
Sbjct: 297 AIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTG 356
Query: 367 ARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
ARI V+L+ L+ + + G+ +C GGG AL +E
Sbjct: 357 ARITVSLIHELKRRGLEKGIASLCVGGGIGVALFIE 392
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 440 bits (1134), Expect = e-154
Identities = 147/400 (36%), Positives = 225/400 (56%), Gaps = 13/400 (3%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ IV RTP+G G+L+SV L + A+ + R+ V V++V+ G A
Sbjct: 2 PEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 61
Query: 73 -GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131
+ AR A L AG P V T+N++C SG++AV AA++I G + + G+ESMS
Sbjct: 62 DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 121
Query: 132 APKYLAEARKGSRLGHDTIVD-----GMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
AP + + +G G+ + D + + +Y MG AE A + I R+EQ
Sbjct: 122 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLR 244
D +A+ S ++ + A G F E+ PV + G+ + I+V++DEG + D KL LR
Sbjct: 182 DRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGP-RRDTSLEKLAALR 238
Query: 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
P F+EGG+VTAGN+S ++DGAAA++LVS A GL+ +A++R A A P P
Sbjct: 239 PVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGP 298
Query: 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSLGHPL 362
A KA+ AGL S + E+NEAF+ A+A + L + +++N +GGA++LGHPL
Sbjct: 299 VPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPL 358
Query: 363 GCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
G SGARIL TL+ +R +K ++G+ +C G G A+V+E
Sbjct: 359 GASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVVE 398
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 418 bits (1076), Expect = e-145
Identities = 144/397 (36%), Positives = 205/397 (51%), Gaps = 25/397 (6%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR----ANVKPLLVQEVFFGNV 67
DV IV R+ +G GF G+ V+ L + + R L++EV GNV
Sbjct: 10 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69
Query: 68 LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
L+ G R A L +GIP S +N+ CSSG+ AV A I++G DI +A G+E
Sbjct: 70 LNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVE 129
Query: 128 SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
SM+N + + LG I L+ MG+ E A I+R +QD
Sbjct: 130 SMTNNY------KNVNPLGM--ISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQD 181
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRP 245
+A S+++ A+N GLF EI P+++ G I DEG + + A L +RP
Sbjct: 182 EFAANSYQKAYKAKNEGLFEDEILPIKLPDG-----SICQSDEGP-RPNVTAESLSSIRP 235
Query: 246 SF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
+F K+ G+ TAGNAS +SDG A ++L A +L L V+ + F PE P
Sbjct: 236 AFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGP 295
Query: 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC 364
+ AIPK + GL+ ID +EINEAF+ A+ LG+D +VN GGA++LGHPLGC
Sbjct: 296 AYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGC 355
Query: 365 SGARILVTLLGVLRHKKGKYGVGGICNGGG-GASALV 400
+GAR + T+L L KK + GV +C G G GA+A+
Sbjct: 356 TGARQVATILREL--KKDQIGVVSMCIGTGMGAAAIF 390
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 412 bits (1061), Expect = e-143
Identities = 149/397 (37%), Positives = 217/397 (54%), Gaps = 22/397 (5%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN 71
DV +V RT + G + +L S + LK N++P + ++ GNVL
Sbjct: 30 ADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPG 89
Query: 72 LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131
G AR A + IP +V +T+N+ CSSG++AV A I+ G DI +A G+ESMS
Sbjct: 90 AGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL 149
Query: 132 APKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAI 191
A + + + D ++ MG+ +E A + I+R++QD++A+
Sbjct: 150 ADRGNPGNITSRLMEKEKARDCLI-----------PMGITSENVAERFGISREKQDTFAL 198
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSS----GRGKPFIIVDKDEGLEKFD--AAKLMKLRP 245
S ++ AQ+ G F EI PV + G + I V +DEG+ + L KL+P
Sbjct: 199 ASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRS-ITVTQDEGI-RPSTTMEGLAKLKP 256
Query: 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
+FK+ GS TAGN+S +SDGAAA++L KA ELGL ++ +R +A P+ P+
Sbjct: 257 AFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPA 316
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
AIP A+ AGL S +D +EINEAF+ A + L L PE+VN GGAV+LGHPLGC+
Sbjct: 317 YAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCT 376
Query: 366 GARILVTLLGVL-RHKKGKYGVGGICNGGG-GASALV 400
GAR ++TLL L R K YGV +C G G GA+A+
Sbjct: 377 GARQVITLLNELKRRGKRAYGVVSMCIGTGMGAAAVF 413
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 409 bits (1053), Expect = e-142
Identities = 146/405 (36%), Positives = 213/405 (52%), Gaps = 24/405 (5%)
Query: 9 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGN 66
S+ RDV IV RTPMG G + A + + I L+R + V P V++V +G
Sbjct: 1 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGC 60
Query: 67 VLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
V G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG
Sbjct: 61 VNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGG 120
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+E M + + H VD L+ MG+ AE+ H I+R++
Sbjct: 121 VEHMGHVS-----------MMHG--VDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQ 167
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKL 243
QD++A+RS + A G F EI P++ G I D DE + + D L L
Sbjct: 168 QDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFL-KIFDYDETI-RPDTTLESLAAL 225
Query: 244 RPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
+P+F +GG+VTAG +S I+DGA+ ++++S +A +LGL+ +A IR A A P
Sbjct: 226 KPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGY 285
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQVNAHGGAVSLG 359
P A KA+ AGL + ID+ E+NEAF+ A+ K L + E+VN HGGA++LG
Sbjct: 286 GPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALG 345
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
HP GCSGARI TLL V++ G +G+ +C G G A V E +
Sbjct: 346 HPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIATVFERV 390
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 401 bits (1033), Expect = e-138
Identities = 144/405 (35%), Positives = 215/405 (53%), Gaps = 25/405 (6%)
Query: 8 ESIKARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
S+ DV IV RTP+ G+ L + + +++ N+ P V ++ G
Sbjct: 25 TSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGT 84
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
VL+ +A R AA AG P +V T+N+ CSSG++AV A +I+ G DI + G
Sbjct: 85 VLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 144
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+ESM+ P + + + +L MGV +E A + ++R E
Sbjct: 145 LESMTTNPMAWEGSVNPAVKKFAQAQNCLL-----------PMGVTSENVAQRFGVSRQE 193
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMS-----SGRGKPFIIVDKDEGLEKFD--AA 238
QD A+ S ++ AA +G F EI PV+ +G KP I V D+G+ + A
Sbjct: 194 QDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKP-ITVSVDDGI-RPTTTLA 251
Query: 239 KLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
L KL+P FK+ G+ TAGN+S +SDGA A++L+ A++ GL V+ R FA P
Sbjct: 252 SLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPA 311
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSL 358
P++AIP A+ AGLE ID +EINEAF+ + + LGLDPE++N +GGA+++
Sbjct: 312 IMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAI 371
Query: 359 GHPLGCSGARILVTLL--GVLRHKKGKYGVGGICNGGG-GASALV 400
GHPLG +GAR + TLL R K ++GV +C G G GA+A+
Sbjct: 372 GHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVF 416
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 397 bits (1023), Expect = e-137
Identities = 142/401 (35%), Positives = 205/401 (51%), Gaps = 24/401 (5%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA 70
V IV RTPMG G+ +V A L + + L R ++ + ++++G V
Sbjct: 2 EQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQT 61
Query: 71 -NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESM 129
G AR AAL A IP+SV T+N++C S M+A+ AA+ I G + + GG+E M
Sbjct: 62 LEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHM 121
Query: 130 SNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSY 189
+ P + H L + MG+ AE+ + H I+R+ QD +
Sbjct: 122 GHVP-----------MSHGVDFHPGLSRNVAKAA--GMMGLTAEMLSRLHGISREMQDQF 168
Query: 190 AIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRPSF 247
A RS R AA SG F EI P G + DE + + + L LRP+F
Sbjct: 169 AARSHARAWAATQSGAFKTEIIPTGGHDADGVL-KQFNYDEVI-RPETTVEALSTLRPAF 226
Query: 248 KE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
G+VTAG +S +SDGAAA++++S +A ELGL+ A+IR A P P
Sbjct: 227 DPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVP 286
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLG 363
A A+ AGL AS ID +E+NEAF+ + K LGL E++N +GGA++LGHPLG
Sbjct: 287 ASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLG 346
Query: 364 CSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
CSGARI TL+ ++ K ++G+ +C G G A V E +
Sbjct: 347 CSGARISTTLINLMERKDAQFGLATMCIGLGQGIATVFERV 387
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 | Back alignment and structure |
|---|
Score = 331 bits (850), Expect = e-111
Identities = 125/429 (29%), Positives = 196/429 (45%), Gaps = 65/429 (15%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVL-- 68
+ I RTP G GSL+ V L ++ +R + L+ ++ G V
Sbjct: 7 EEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPV 66
Query: 69 ---SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
++ AR A L AG+P + +N+ C+SG++AV AAQ ++ G +D+V+AGG
Sbjct: 67 GDQGGDI----ARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGG 122
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW--------DVYNDFGMGVCAEICAN 177
+ESMS P M DG G+ A++ A
Sbjct: 123 VESMSRVP--------------------MGSDGGAWATDPETNYRIGFVPQGIGADLIAT 162
Query: 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFD 236
+R++ D+YA+RS ++ AA + G FA + PV +G +I+D DE +
Sbjct: 163 LEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGL----VILDHDEHMRPDTT 218
Query: 237 AAKLMKLRPSFKEGGS---------------------VTAGNASIISDGAAALVLVSGVK 275
L KL+ +F G T GN+S I DGAA +++ S
Sbjct: 219 MEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKA 278
Query: 276 ALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVA 335
GL A+I A + P T P+ A K + AGL ID +E+NEAF+ V
Sbjct: 279 GKSQGLTPRARIVATATSGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVV 338
Query: 336 IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGG 395
+ QK L + E++N +GGA+++GHPLG +GA I T++ L + + + +C GGG
Sbjct: 339 LKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNARRALITLCIGGGM 398
Query: 396 ASALVLELM 404
A ++E +
Sbjct: 399 GVATIIERV 407
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 5e-11
Identities = 52/405 (12%), Positives = 96/405 (23%), Gaps = 114/405 (28%)
Query: 5 EPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64
+P E K V VG G +G +S+ L + + +L QE F
Sbjct: 1031 DPYEMYKYVHVSEVGNC---SGSGMGGVSA-----LRGMFKDRFKDEPVQNDIL-QESFI 1081
Query: 65 GNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAG 124
+ + + + P C++ +++V + ++I G I + G
Sbjct: 1082 NTMSAWVN------MLLISSSGPIKTPVGA----CATSVESVDIGVETILSGKARICIVG 1131
Query: 125 GMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRD 184
G + D +G E K T
Sbjct: 1132 GYD--------------------DFQEEGS-----------------FEFGNMKATSNTL 1154
Query: 185 EQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244
E+ F P EMS R P R
Sbjct: 1155 EE-------------------FEHGRTPAEMS--R--PA---TTT--------------R 1174
Query: 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
F + + GA +++ AL++G+ + + A A AP
Sbjct: 1175 NGF------------MEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAP 1222
Query: 305 SLAIPKAIANAGLEASQIDYYEINEAF--SVVAIANQKLLGLDPEQV---NAHGGAVSLG 359
I A + + +N + + ++ ++ +
Sbjct: 1223 GKGILTT-AREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSE 1281
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
R + G L
Sbjct: 1282 DQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGA 1326
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 1e-07
Identities = 59/398 (14%), Positives = 117/398 (29%), Gaps = 137/398 (34%)
Query: 2 VP-LEPSESIK--------ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRA 52
V L+P ++ A++V I G + G G + V+ S ++C
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDG-----VLGS-GK-TWVALDVCLSYKVQCK---- 179
Query: 53 NVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV------CTTINKVCSSGMKAV 106
+ NL P +V+ I+ +S
Sbjct: 180 ----------MDFKIFWLNLKNC---------NSPETVLEMLQKLLYQIDPNWTSRSDH- 219
Query: 107 MLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSR-LGHDTIVDGMLKDGLWD--VY 163
+ +I+L I+ I + L +++ L +V L + + +
Sbjct: 220 ---SSNIKLRIHSI---------QAELRRLLKSKPYENCL----LV---L-LNVQNAKAW 259
Query: 164 NDFGMGVCAEICANKHTI--TRDEQDSYAIRSFKRGI-----------AAQNSGLFA-W- 208
N F + C K + TR +Q + + + + L +
Sbjct: 260 NAFNLS-----C--K-ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311
Query: 209 EIA----PVEMSSGRGKPFII-----VDKD-----EGLEKFDAAKLMK------------ 242
+ P E+ + P + +D + + + KL
Sbjct: 312 DCRPQDLPREVLTT--NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369
Query: 243 -LRPSFKEGGSVTAGNASIISDGA----AALVLVSGVKALELGLQVIAKIRGFADAAQAP 297
R F S+ A L L+ + V+ K+ ++ + P
Sbjct: 370 EYRKMFDR--------LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP 421
Query: 298 EWFT-TAPSLAI---PKAIANAGLEASQIDYYEINEAF 331
+ T + PS+ + K L S +D+Y I + F
Sbjct: 422 KESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 44.6 bits (104), Expect = 9e-06
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 19/45 (42%)
Query: 274 VKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLE 318
+K L+ L++ A + +AP+LAI A +E
Sbjct: 22 LKKLQASLKLYA-----------DD---SAPALAI-----KATME 47
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 404 | |||
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.98 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.97 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.97 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.97 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.97 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.97 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.96 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.96 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.96 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.96 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.96 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.96 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.96 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.96 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.95 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.95 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.95 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.95 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.95 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.95 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.94 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.94 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.94 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.94 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.93 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.93 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.93 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.93 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.92 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.92 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.92 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.92 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.92 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.91 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.91 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.91 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.91 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.91 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.91 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.91 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.91 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.91 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.9 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.89 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.89 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.89 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.88 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.88 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.88 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.87 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.83 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.75 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 94.58 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 92.99 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 92.66 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 92.17 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 92.16 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 91.84 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 91.63 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 91.45 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 91.06 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 90.89 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 90.75 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 90.71 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 90.71 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 90.6 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 90.45 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 90.15 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 89.69 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 89.11 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 88.95 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 88.91 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 88.89 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 88.51 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 88.17 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 88.09 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 87.46 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 87.43 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 87.39 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 87.26 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 87.24 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 87.16 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 86.87 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 86.8 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 86.36 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 86.35 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 86.19 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 85.86 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 85.66 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 85.48 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 85.47 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 85.44 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 84.31 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 81.18 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 80.2 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 80.1 |
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-71 Score=545.22 Aligned_cols=390 Identities=45% Similarity=0.697 Sum_probs=363.8
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~ 91 (404)
|++|+|||+++|||+++.+.++++++.+|+.+|+++||+++|+++++||.+++|+..+++.+++.+.+++..+|+++++|
T Consensus 6 m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p 85 (396)
T 4dd5_A 6 MREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP 85 (396)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce
Confidence 57999999999999999888899999999999999999999999999999999999988888899999999999986799
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHH
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (404)
+++++.+|+|++.+|..|+.+|++|.+|++||+|+|.+++.|......+++..++.....+++..+++.+++.+..|++.
T Consensus 86 ~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (396)
T 4dd5_A 86 AMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGIT 165 (396)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHH
T ss_pred EEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHH
Confidence 99999999999999999999999999999999999999998877666666666665555566666788888888899999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCC
Q 015576 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (404)
Q Consensus 172 a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~ 250 (404)
|++|+++||++||++++|++++|+++.+|+.+++|++||+|++++.+++. ..+++|+.+|+ +|.|+|++++|+++++
T Consensus 166 a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~l~~~~~v~~p~ 243 (396)
T 4dd5_A 166 AENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGD--TVVDKDEYIKPGTTMEKLAKLRPAFKKD 243 (396)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----C--EEECSCSCCCTTCCHHHHHHCCBSSSTT
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCc--eeecCcccccCCCCHHHHhhCCCccCCC
Confidence 99999999999999999999999999999999999999999999887764 35899999999 9999999999999999
Q ss_pred CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeeccc
Q 015576 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (404)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~ 330 (404)
|++|++|||+++|||+++||++++.|++++.+|+++|.+++..++.|..+..++..+++++|+++|++++|||++|+||+
T Consensus 244 g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 323 (396)
T 4dd5_A 244 GTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVEANEA 323 (396)
T ss_dssp CSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred CCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCEEEecCh
Confidence 99999999999999999999999999999999999999999988888777778899999999999999999999999999
Q ss_pred chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 331 FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 331 ~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
|+...+.+.|.||+++.|+|++||++++|||.|++|+.+++++++||+++++++||+++|++||+|.|+|||+
T Consensus 324 f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 324 FAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp BHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCceeEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-70 Score=540.38 Aligned_cols=392 Identities=41% Similarity=0.620 Sum_probs=363.7
Q ss_pred CCCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCC
Q 015576 10 IKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (404)
Q Consensus 10 ~~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~ 89 (404)
-||++|+|||+++|||+++.+.++++++.+|+.+|+++||+++|+++++||.+++|+..+...+++.+.+++..+|++.+
T Consensus 2 ~~m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~ 81 (394)
T 3ss6_A 2 NAMHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDT 81 (394)
T ss_dssp CCCCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTT
T ss_pred CCCceEEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCC
Confidence 35789999999999999998888899999999999999999999999999999999998877778899999999999767
Q ss_pred cceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHH
Q 015576 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (404)
Q Consensus 90 ~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (404)
+|+++++.+|+|++.+|+.|+++|++|.+|++||+|+|.++..|......+++..++.....+++. +++.+++....|+
T Consensus 82 ~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g 160 (394)
T 3ss6_A 82 VTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMG 160 (394)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHH-HHTBCTTTCCBHH
T ss_pred ceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccc-cccccccccchHH
Confidence 999999999999999999999999999999999999999999877655555555555443344433 6677888888999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcC
Q 015576 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFK 248 (404)
Q Consensus 170 ~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~ 248 (404)
+.|++|+++||+++|++++|++++|+++.+|+.+++|++||+|++++.+++. .++++|+.+|+ +|.|++++++|+++
T Consensus 161 ~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~--~~~~~d~~~R~~~t~e~~~~~~pvf~ 238 (394)
T 3ss6_A 161 ETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKE--VVFSKDEHPRADITAEKLAGLKPAFR 238 (394)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCE--EEECSCCCCCTTCCHHHHHTCCBSSS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCc--eeecccccccCCCCHHHHhhCCCccC
Confidence 9999999999999999999999999999999999999999999999887764 35889999998 99999999999999
Q ss_pred CCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeec
Q 015576 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (404)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~h 328 (404)
++|++|++||++++||++++||++++.+++++.+|+++|.+++.....|..+..++..+++++|+++|++++|||++|+|
T Consensus 239 ~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ve~~ 318 (394)
T 3ss6_A 239 KDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLLEIN 318 (394)
T ss_dssp TTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred CCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEEEeC
Confidence 99999999999999999999999999999999999999999999887777777788999999999999999999999999
Q ss_pred ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 329 EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 329 d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
|+|+...+.+.|.||++++|+|++||++++|||.|+||+.+++++++||+++++++||+++|+|||+|.|+|||++
T Consensus 319 d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~~ 394 (394)
T 3ss6_A 319 EAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGLEKGIASLCVGGGIGVALFIEAL 394 (394)
T ss_dssp CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCCEEEEEEEETTTEEEEEEEEEC
T ss_pred CchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccCcCceeEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-70 Score=538.22 Aligned_cols=392 Identities=46% Similarity=0.688 Sum_probs=362.5
Q ss_pred CCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc
Q 015576 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~ 90 (404)
+|++|+|||+++|||+++.+.++++++.+|+.+|+++||+++|+++++||.+++|+..+...+++++.+++..+|++.++
T Consensus 3 ~m~~v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~ 82 (395)
T 4e1l_A 3 AMKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSV 82 (395)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTS
T ss_pred CCCeEEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCc
Confidence 47899999999999999988889999999999999999999999999999999999988877889999999999997679
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|+++++.+|+|++.+|+.|+.+|++|.+|++||+|+|++++.|......+++..++.....+.+..+++.+++....|++
T Consensus 83 p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (395)
T 4e1l_A 83 PSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGI 162 (395)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHH
T ss_pred eEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHH
Confidence 99999999999999999999999999999999999999999776654455555555544555666677888887789999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCC
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~ 249 (404)
.|++|+++||+++|++++|++++|+++.+|+.+++|++||+|++++.+++.+ .++++|+.+|+ +|.|++.+++|++++
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~-~~~~~d~~~r~~~t~e~l~~~~~v~~~ 241 (395)
T 4e1l_A 163 TAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYPKLGMTFEGLSKLKPAFKK 241 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEE-EEECSCSCCCTTCCHHHHHHCCBSSST
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcc-eEECCccccCCCCCHHHHhhCCCccCC
Confidence 9999999999999999999999999999999999999999999998877765 45889999998 999999999999999
Q ss_pred CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecc
Q 015576 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (404)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd 329 (404)
+|++|++||++++||++++||++++.+++++.+|+++|.+++...+.|..+..++.++++++|+++|++++|||++|+||
T Consensus 242 ~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~~d 321 (395)
T 4e1l_A 242 DGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANE 321 (395)
T ss_dssp TCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSEEEECC
T ss_pred CCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEecC
Confidence 99999999999999999999999999999999999999999999888877777889999999999999999999999999
Q ss_pred cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 330 ~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+|+...+.+.|.||++++|+|++||++++|||.|+||+.+++++++||+++++++||+++|+|||+|.|+|||+
T Consensus 322 ~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 322 AFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTCSEEEEEEESSTTEEEEEEEEC
T ss_pred hhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccCCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-69 Score=532.19 Aligned_cols=389 Identities=42% Similarity=0.643 Sum_probs=350.7
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~ 91 (404)
|++|+|||+++|||+++.+.++++++.+|+.+|+++||+++|+++++||.+++|+..+...+++.+.+++..+|+++.+|
T Consensus 2 m~~v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 81 (392)
T 2vu1_A 2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT 81 (392)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred CCCEEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce
Confidence 57899999999999999888889999999999999999999999999999999999887777889999999999975589
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHH
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (404)
+++++++|+|++.+|..|+++|++|++|++||+|+|.++..|.. ...+++..++....++.+..+++.+++....|+++
T Consensus 82 ~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (392)
T 2vu1_A 82 AWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHC-AHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTT 160 (392)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEE-ECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHH
T ss_pred EEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccc-cccccccccCcccccchhhhcccccccccchHHHH
Confidence 99999999999999999999999999999999999999876653 11122222221112233333455566555689999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCC-CCceeeccCCcccc-CCHHHHhcCCCCcCC
Q 015576 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRG-KPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (404)
Q Consensus 172 a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~-~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~ 249 (404)
+++|+++||+++|++++|++++|+++.+||++++|+++|+|++++.+++ +| |++|+.+|+ +|+|+|+++||++++
T Consensus 161 a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~---f~~d~~~r~~~t~e~~~~~~~v~~~ 237 (392)
T 2vu1_A 161 AENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDIT---VDADEYIRHGATLDSMAKLRPAFDK 237 (392)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEE---ECSCSSCCTTCCHHHHHTCCCSSCT
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCcee---eccccccCCCCCHHHHhcCCCccCC
Confidence 9999999999999999999999999999999999999999998865443 45 999999999 999999999999988
Q ss_pred CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecc
Q 015576 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (404)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd 329 (404)
+|++|++|||+++|||+++||++++.|++++.+|+++|.|++.....|..+..++..+++++|+++|++++|||++|+||
T Consensus 238 ~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ie~~d 317 (392)
T 2vu1_A 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANE 317 (392)
T ss_dssp TCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred CCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEEEecc
Confidence 99999999999999999999999999999999999999999999877777777889999999999999999999999999
Q ss_pred cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 330 ~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+|+...+.+.|.||++++|+|++||++++|||.|++|+++++++++||++++++++|++.|+|||++.++|||++
T Consensus 318 ~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~~~e~~ 392 (392)
T 2vu1_A 318 AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392 (392)
T ss_dssp SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTCSEEEEEEEETTTEEEEEEEECC
T ss_pred ccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCCCEEEEEEecccchheEEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999974
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-69 Score=531.10 Aligned_cols=391 Identities=38% Similarity=0.558 Sum_probs=345.2
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCCCc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~~~ 90 (404)
|++|+|||++||||+++.+.++++++.+|+.+|+++||+++|+++++||.+++|+..+++. +++.+.+++..+|++.++
T Consensus 1 m~~v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 1 MPEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp --CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CCceEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 3689999999999999988888999999999999999999999999999999999887765 678899999999997578
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccc----cccccc-ccccc
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM----LKDGLW-DVYND 165 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~ 165 (404)
|+++++++|+|++.+|..|+++|++|++|++||+|+|.++..|......+++..++.....+.+ ..+++. +.+..
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 160 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT 160 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCC
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccccccccc
Confidence 9999999999999999999999999999999999999998866533222222222110000111 112332 22223
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLR 244 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~ 244 (404)
..|++.|++|+++||+++|++++|++++|+++..||.+++|+++|+|++++++++. ..+++|+.+|+ +|+|+|+++|
T Consensus 161 ~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~r 238 (401)
T 1ulq_A 161 ESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGPRRDTSLEKLAALR 238 (401)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHHSC
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCc--eeeccccccCCCCCHHHHhhCC
Confidence 56999999999999999999999999999999999999999999999988766553 46899999999 9999999999
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcce
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 324 (404)
|+++++|++|++|||+++|||+++||++++.|++++.+|+++|.|++..+++|..+..++..+++++|+++|++++|||+
T Consensus 239 pif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ 318 (401)
T 1ulq_A 239 PVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGL 318 (401)
T ss_dssp BSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSE
T ss_pred CccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHHHcCE
Confidence 99998999999999999999999999999999999999999999999998888777778899999999999999999999
Q ss_pred EeecccchHHHHHHHHHhCCC--CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 325 YEINEAFSVVAIANQKLLGLD--PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lg~~--~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
+|+||+|+.+++..+|.||++ ..|+|++||++++|||.|+||+++++++++||++++.+++|++.|++||++.++|||
T Consensus 319 ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~v~~ 398 (401)
T 1ulq_A 319 IELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVVE 398 (401)
T ss_dssp EEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEE
T ss_pred EEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhcCCCEEEEEeecCCcccEEEEEE
Confidence 999999999999999999995 468999999999999999999999999999999999999999999999999999999
Q ss_pred eC
Q 015576 403 LM 404 (404)
Q Consensus 403 ~~ 404 (404)
++
T Consensus 399 ~~ 400 (401)
T 1ulq_A 399 GM 400 (401)
T ss_dssp EC
T ss_pred eC
Confidence 74
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-68 Score=524.80 Aligned_cols=389 Identities=45% Similarity=0.658 Sum_probs=350.0
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~ 91 (404)
+++|+|||+++|||+++.+.++++++.+|+.+|+++||+++|+++++||.+++|+..+...++..+.+++..+|++..+|
T Consensus 5 ~~~v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 84 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVP 84 (397)
T ss_dssp CSCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCcc
Confidence 36799999999999999888889999999999999999999999999999999999887667889999999999966799
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHH
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (404)
+++++++|+|++.+|..|+++|++|++|++||+|+|.++..|.... .+++..++....++.+..+++.+++....|+++
T Consensus 85 ~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~ 163 (397)
T 1wl4_A 85 AWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAY-LRTGVKIGEMPLTDSILCDGLTDAFHNCHMGIT 163 (397)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECC-CSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHH
T ss_pred EEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccc-cccccccCcccccchhccccccCccccchHHHH
Confidence 9999999999999999999999999999999999999997665332 122222221111233333456566555789999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCC
Q 015576 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (404)
Q Consensus 172 a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~ 250 (404)
+++|+++||++||++|+|++++|+++.+|+..++|+.||+|++++.+++. .++++|+.+|+ +|+|+|+++||+++++
T Consensus 164 a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~rpvfd~~ 241 (397)
T 1wl4_A 164 AENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL--IEVKTDEFPRHGSNIEAMSKLKPYFLTD 241 (397)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHTSCCSSCCS
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCc--eeeccccccCCCCCHHHHhcCCCccCCC
Confidence 99999999999999999999999999999999999999999998766553 45788888887 9999999999999865
Q ss_pred --CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeec
Q 015576 251 --GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (404)
Q Consensus 251 --g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~h 328 (404)
|++|++|||+++|||+++||++++.+++++.+|+++|.|++.....|..+..++..+++++|+++|++++|||++|+|
T Consensus 242 ~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~ 321 (397)
T 1wl4_A 242 GTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEIN 321 (397)
T ss_dssp SCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred CCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 899999999999999999999999999999999999999999987777677788999999999999999999999999
Q ss_pred ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 329 EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 329 d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
|+|+.+.+.+.|.||++++|+|++||++++|||.|++|+++++++++||+++++++||+++|+|||++.++|||+
T Consensus 322 d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 322 EAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCCEEEEEEEETTTEEEEEEEEE
T ss_pred cccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCCCEEEEEEecccchheEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-68 Score=522.69 Aligned_cols=379 Identities=37% Similarity=0.523 Sum_probs=345.8
Q ss_pred CCceEEEeeccCccccCC-CCCCCCCHHHHHHHHHHHHHHHc-CCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCCC
Q 015576 12 ARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN 88 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~-~~~~~~~~~~l~~~A~~~AL~~a-gi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~~ 88 (404)
|++|+|||+++|||+++. +.+++++..+|+.+|+++||+++ |+++++||.+++|+..++.. +++.+.+++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 478999999999999987 88899999999999999999999 99999999999999988775 7889999999999976
Q ss_pred CcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccH
Q 015576 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (404)
Q Consensus 89 ~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (404)
.+|+++|+++|+|++.+|+.|+++|++|.+|++||+|+|++++.|... +.+ .++ ..+.+++++ ...|
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~---~~~--------~~~-~~~~~~~~~-~~~~ 147 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSH---GVD--------FHP-GLSRNVAKA-AGMM 147 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTT---TBC--------CCT-TCC--------CCC
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCcccc---ccC--------cCc-ccccccccc-cccH
Confidence 799999999999999999999999999999999999999999876541 111 111 223444444 5789
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCc
Q 015576 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (404)
Q Consensus 169 ~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~ 247 (404)
++.|++|+++||+++|++++|++++|+++.+|+.+++|+.+|+|++++.+++.+ ..++.|+.+|+ +|+|+|++++|++
T Consensus 148 g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~-~~~~~d~~~r~~~t~e~l~~~~p~f 226 (387)
T 3goa_A 148 GLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVL-KQFNYDEVIRPETTVEALSTLRPAF 226 (387)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCE-EEECSCTTCCTTCCHHHHTTSCCSS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcc-cccccccccCCCCCHHHHhcCCCcc
Confidence 999999999999999999999999999999999999999999999998877753 35899999998 9999999999999
Q ss_pred CC-CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEe
Q 015576 248 KE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (404)
Q Consensus 248 ~~-~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~ 326 (404)
++ +|++|++|||+++||++++||++++.|++++.+|+++|.|++...+.|..+..++..+++++|+++|++++|||++|
T Consensus 227 ~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve 306 (387)
T 3goa_A 227 DPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFE 306 (387)
T ss_dssp CTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred cCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 98 89999999999999999999999999999999999999999999988888888899999999999999999999999
Q ss_pred ecccchHHHHHHHHHhCCC---CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 327 INEAFSVVAIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 327 ~hd~~~~~~~~~~e~lg~~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+||+|+.+.+...+.||+| ..|+|++||++++|||.|++|+.+++++++||+++++++||+++|+|||+|.|+|||+
T Consensus 307 ~h~~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 307 MNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp ECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEEC
T ss_pred EeCcchHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcCCCEEEEEeccCcCceEEEEEEe
Confidence 9999999999999999995 4589999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 015576 404 M 404 (404)
Q Consensus 404 ~ 404 (404)
+
T Consensus 387 ~ 387 (387)
T 3goa_A 387 V 387 (387)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-67 Score=525.53 Aligned_cols=384 Identities=36% Similarity=0.551 Sum_probs=340.3
Q ss_pred CCCCceEEEeeccCccccCC-CCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCC
Q 015576 10 IKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIP 87 (404)
Q Consensus 10 ~~~~~v~ivg~~~t~~~~~~-~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~ 87 (404)
.+|++|||||++||||+++. +.++++++.+|+.+|+++||+++|+++++||.+++|+..++. .+++.+.+++..+|++
T Consensus 27 ~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~ 106 (442)
T 2wu9_A 27 LYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 106 (442)
T ss_dssp CGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCC
T ss_pred hcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCC
Confidence 34678999999999999986 788899999999999999999999999999999999987643 2456788999999996
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccccc
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (404)
..+|+++++++|+|++.+|..|+++|++|++|++||+|+|.++..|..... . ..+.+..+++ +++....
T Consensus 107 ~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~-----~-----~~~~~~~~~~-~~~~~~~ 175 (442)
T 2wu9_A 107 ETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEG-----S-----VNPAVKKFAQ-AQNCLLP 175 (442)
T ss_dssp TTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCS-----C-----CCGGGGGCHH-HHHTTSC
T ss_pred CCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccc-----c-----cchhhhhccc-cccchhH
Confidence 578999999999999999999999999999999999999999876542100 0 0011111222 3344567
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCC----CCceeeccCCcccc-CCHHHHhc
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRG----KPFIIVDKDEGLEK-FDAAKLMK 242 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~----~p~~~~~~d~~~~~-~~~~~~~~ 242 (404)
|++.|++|+++||+++|++++|++++++++..||.+++|+.+|+|++++.... .....+++||.+|+ +|+|+|++
T Consensus 176 mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~ 255 (442)
T 2wu9_A 176 MGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGK 255 (442)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHT
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhc
Confidence 99999999999999999999999999999999999999999999998741110 01135899999998 99999999
Q ss_pred CCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCc
Q 015576 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 322 (404)
+||+|+++|++|++|||+++|||+++||++++.|++++.+|+++|.|++...+.|..+..++..+++++|+++|++++||
T Consensus 256 ~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DI 335 (442)
T 2wu9_A 256 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDI 335 (442)
T ss_dssp SCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGC
T ss_pred CCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHC
Confidence 99999999999999999999999999999999999999999999999999988777777788899999999999999999
Q ss_pred ceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC--CceeEEeeeccccceeeeE
Q 015576 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--GKYGVGGICNGGGGASALV 400 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--~~~gl~~~~~~gG~~~a~l 400 (404)
|++|+|++|+.+++..+|.||++++|+|++||++++|||.|+||+++++++++||+++. .+++|++.|+|||++.++|
T Consensus 336 d~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~~~~~~glas~~~GGG~~~a~v 415 (442)
T 2wu9_A 336 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAV 415 (442)
T ss_dssp CEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEETTTEEEEEE
T ss_pred CEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccCCCCCEEEEEeecccchheEEE
Confidence 99999999999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred EEeC
Q 015576 401 LELM 404 (404)
Q Consensus 401 l~~~ 404 (404)
||+.
T Consensus 416 ~~~~ 419 (442)
T 2wu9_A 416 FERG 419 (442)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9973
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-67 Score=517.10 Aligned_cols=385 Identities=35% Similarity=0.518 Sum_probs=340.6
Q ss_pred CCCcCCCCCceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHHcC----CCCCccCeEEEEeccCCCCCCcHHHH
Q 015576 5 EPSESIKARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRAN----VKPLLVQEVFFGNVLSANLGQAPARQ 79 (404)
Q Consensus 5 ~~~~~~~~~~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~ag----i~~~~id~li~g~~~~~~~~~~~a~~ 79 (404)
|+-...+|++|+|||++||||+++ .+.++++++.+|+.+|+++||+++| +++++||.+++|+..++..+++.+.+
T Consensus 2 ~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~ 81 (393)
T 1afw_A 2 NSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRA 81 (393)
T ss_dssp TTTTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHH
T ss_pred cchhhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHH
Confidence 344455688999999999999998 4888899999999999999999999 99999999999998877666778999
Q ss_pred HHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccc
Q 015576 80 AALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGL 159 (404)
Q Consensus 80 i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (404)
++..+|++.++|+++++++|+|++.+|..|+++|++|++|++||+|+|.++..|..... + + ....+.+..+++
T Consensus 82 va~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~---~--~--~~~~~~~~~~g~ 154 (393)
T 1afw_A 82 ACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNP---L--G--MISSEELQKNRE 154 (393)
T ss_dssp HHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCT---T--C--SCCCHHHHHCTT
T ss_pred HHHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccc---c--c--cccchhhhhccc
Confidence 99999996578999999999999999999999999999999999999998875442110 0 0 000001111233
Q ss_pred ccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHH
Q 015576 160 WDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAA 238 (404)
Q Consensus 160 ~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~ 238 (404)
.+.....|++++++|+++||+++|+++.|++++|+++.+|+.+++|++||+|+++++ +. .+++|+.+|+ +|.|
T Consensus 155 -~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~---~~~~d~~~r~~~t~e 228 (393)
T 1afw_A 155 -AKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS---ICQSDEGPRPNVTAE 228 (393)
T ss_dssp -GGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC---EECSCSSCCSCCCHH
T ss_pred -ccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc---eeccccccCCCCCHH
Confidence 333346799999999999999999999999999999999999999999999998765 22 4889999998 9999
Q ss_pred HHhcCCCCcCCC-CccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCC
Q 015576 239 KLMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGL 317 (404)
Q Consensus 239 ~~~~~~~~~~~~-g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl 317 (404)
+|+++||+|+++ |++|++|||+++|||+++||++++.|++++.+|+++|.|++...+.|..+..++..+++++|+++|+
T Consensus 229 ~~~~~rpvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl 308 (393)
T 1afw_A 229 SLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGL 308 (393)
T ss_dssp HHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTC
T ss_pred HHhcCCCcccCCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCC
Confidence 999999999877 9999999999999999999999999999999999999999999987777777889999999999999
Q ss_pred CCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeecccccee
Q 015576 318 EASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGAS 397 (404)
Q Consensus 318 ~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~ 397 (404)
+++|||++|+|++|+.+++..+|.||++++|+|++||++++|||.|++|+++++++++||+++++ |++++|++||++.
T Consensus 309 ~~~dId~ve~h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~--gl~~~c~ggg~g~ 386 (393)
T 1afw_A 309 QVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI--GVVSMCIGTGMGA 386 (393)
T ss_dssp CGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE--EEEEEEETTTEEE
T ss_pred CHHHCCEEEEeccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC--cEEEEeecccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999876 9999999999999
Q ss_pred eeEEEeC
Q 015576 398 ALVLELM 404 (404)
Q Consensus 398 a~ll~~~ 404 (404)
++|||++
T Consensus 387 a~~~~~~ 393 (393)
T 1afw_A 387 AAIFIKE 393 (393)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999974
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-66 Score=511.62 Aligned_cols=379 Identities=37% Similarity=0.545 Sum_probs=340.8
Q ss_pred CCCCceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHHc-CCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCC
Q 015576 10 IKARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGI 86 (404)
Q Consensus 10 ~~~~~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~a-gi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl 86 (404)
.+|++|+|||++||||+++ .+.++++++.+|+.+|+++||+++ |+++++||.+++|+..+++. +++.+.+++..+|+
T Consensus 2 ~~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl 81 (390)
T 1wdk_C 2 LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI 81 (390)
T ss_dssp CCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS
T ss_pred CCCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCC
Confidence 3468899999999999998 588889999999999999999999 99999999999999887654 57789999999999
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccc
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (404)
+.++|+++++++|+|++.+|+.|+++|++|++|++||+|+|.++..|..... +.+ ..+..++ +....
T Consensus 82 ~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~------~~~----~~~~~~~---~~~~~ 148 (390)
T 1wdk_C 82 PHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV------DPN----PHMSLYA---AKASG 148 (390)
T ss_dssp CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB------CCC----GGGGGTS---CGGGG
T ss_pred CCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCccccc------ccC----ccccccC---Ccchh
Confidence 7679999999999999999999999999999999999999999876642210 000 0011111 11124
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCC--CCceeeccCCcccc-CCHHHHhcC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRG--KPFIIVDKDEGLEK-FDAAKLMKL 243 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~--~p~~~~~~d~~~~~-~~~~~~~~~ 243 (404)
.|++.|++|+++||+++++++.|++++|+++..|+++++|.++|+|++++.+.+ +| ||+|+.+|+ +|+|+|+++
T Consensus 149 ~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~---fd~d~~~r~~~t~e~~~~~ 225 (390)
T 1wdk_C 149 MMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKI---FDYDETIRPDTTLESLAAL 225 (390)
T ss_dssp SHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEE---ECSCTTCCTTCCHHHHHTS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCccee---eccccccCCCCCHHHHhcC
Confidence 589999999999999999999999999999999999999999999998765444 45 999999999 999999999
Q ss_pred CCCcCC-CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCc
Q 015576 244 RPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 244 ~~~~~~-~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 322 (404)
||++++ +|++|++|||+++|||+++||++++.|++++.+|+++|.|++...+.|..+..++..+++++|+++|++++||
T Consensus 226 ~~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dI 305 (390)
T 1wdk_C 226 KPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADI 305 (390)
T ss_dssp CCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGC
T ss_pred CCcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhC
Confidence 999998 9999999999999999999999999999999999999999999987777677788999999999999999999
Q ss_pred ceEeecccchHHHHHHHHHhCCC---CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeee
Q 015576 323 DYYEINEAFSVVAIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lg~~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ 399 (404)
|++|+||+|+...+.+.|.||++ ..|+|++||++++|||.|++|+++++++++||+++++++||+++|++||++.++
T Consensus 306 d~ve~~d~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~ 385 (390)
T 1wdk_C 306 DFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIAT 385 (390)
T ss_dssp CEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEE
T ss_pred cEEEeccCCHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcCCCEEEEEecccchheEEE
Confidence 99999999999999999999999 678999999999999999999999999999999999999999999999999999
Q ss_pred EEEeC
Q 015576 400 VLELM 404 (404)
Q Consensus 400 ll~~~ 404 (404)
|||++
T Consensus 386 ~~~~~ 390 (390)
T 1wdk_C 386 VFERV 390 (390)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99974
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-65 Score=508.16 Aligned_cols=378 Identities=33% Similarity=0.483 Sum_probs=319.3
Q ss_pred CCCceEEEeeccCcccc-CCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeccCCCC-CCcHHHHHHHHCCCC
Q 015576 11 KARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP 87 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~-~~~~~~~~~~~~l~~~A~~~AL~~-agi~~~~id~li~g~~~~~~~-~~~~a~~i~~~lGl~ 87 (404)
|+++|||||+++|||+| +.+.+++++..+|+.+|+++||++ +|+++++||.+++|+..+... +++++++++..+|++
T Consensus 5 m~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp 84 (407)
T 3svk_A 5 MSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLP 84 (407)
T ss_dssp --CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCC
T ss_pred CCCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCC
Confidence 77899999999999995 677889999999999999999999 999999999999999887653 678999999999997
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccccc
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (404)
..+|+++|+.+|+|++.+|..|+++|++|.+|+|||+|+|++++.|....... +..++ .+..++....
T Consensus 85 ~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~--------~~~~~----~~~~~~~~~~ 152 (407)
T 3svk_A 85 ETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGA--------WATDP----ETNYRIGFVP 152 (407)
T ss_dssp TTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-------------------CCCCT----TTCCCCCCHH
T ss_pred CCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccc--------cccCc----hhhccccccC
Confidence 68999999999999999999999999999999999999999998775432110 11111 1122333467
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCC
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~ 246 (404)
|++.|++++++|+++|+++++|++++++++..+..++.|..+|+|++.+.. . ..+++|+.+|+ +|+|+|+++||+
T Consensus 153 ~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g--~--~~~~pd~~~r~~~t~e~l~~~~~v 228 (407)
T 3svk_A 153 QGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNG--L--VILDHDEHMRPDTTMEGLAKLKTA 228 (407)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTS--C--EEECSCTTCCTTCCHHHHHTSCBS
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCC--c--eeeCCccccCCCCCHHHHhhCCCe
Confidence 999999999999999999999999999999999999999999999975332 2 24788999998 999999999999
Q ss_pred cCCCCcc---------------------ccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchH
Q 015576 247 FKEGGSV---------------------TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305 (404)
Q Consensus 247 ~~~~g~~---------------------~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 305 (404)
+++.|.+ |++|||+++|||+++||++++.|++++.+|+++|.+++...++|..+..++.
T Consensus 229 f~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~ 308 (407)
T 3svk_A 229 FDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPT 308 (407)
T ss_dssp CC-------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHH
T ss_pred ecCCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHH
Confidence 9876654 9999999999999999999999999999999999999999888887778889
Q ss_pred HHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCcee
Q 015576 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (404)
Q Consensus 306 ~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~g 385 (404)
.+++++|+++|++++|||++|+||+|+.+++.+.|.||++++|+|++||++++|||.|+||+++++++++||+++++++|
T Consensus 309 ~a~~~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~~~~~g 388 (407)
T 3svk_A 309 PATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNARRA 388 (407)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeccccceeeeEEEeC
Q 015576 386 VGGICNGGGGASALVLELM 404 (404)
Q Consensus 386 l~~~~~~gG~~~a~ll~~~ 404 (404)
|+++|+|||+|.|+|||++
T Consensus 389 l~~~c~ggG~g~a~~~e~~ 407 (407)
T 3svk_A 389 LITLCIGGGMGVATIIERV 407 (407)
T ss_dssp EEEEECSSSCEEEEEEEEC
T ss_pred EEEeeccCcceEEEEEEcC
Confidence 9999999999999999985
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-65 Score=507.28 Aligned_cols=389 Identities=50% Similarity=0.791 Sum_probs=346.0
Q ss_pred CCCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc
Q 015576 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~ 90 (404)
++++|+|||++||||+++.+.++++++.+|+.+|+++||+++|+++++||.+++|+..+...+++.+.+++..+|++.++
T Consensus 6 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~ 85 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPIST 85 (395)
T ss_dssp BCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTC
T ss_pred CCCCeEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCc
Confidence 45789999999999999888888999999999999999999999999999999999988777888999999999996578
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (404)
|+++++++|+|++.||..|+++|++|++|++||+|+|.++..|....+ .+..++.....+.+..+++.+++....|++
T Consensus 86 p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ 163 (395)
T 2ib8_A 86 PCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNR--GSTPYGGVKLEDLIVKDGLTDVYNKIHMGS 163 (395)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECS--SBCCTTCEEEEEHHHHHTTEETTTTEEHHH
T ss_pred eEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccc--cccccccccccccccccccccccccchHHH
Confidence 999999999999999999999999999999999999999876542210 000011000111122344555555678999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcC-C
Q 015576 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK-E 249 (404)
Q Consensus 171 ~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~-~ 249 (404)
.|++|+++||+++++++.+++++|+|+.+|+..++|+++|+|+++++. ++|...++.|+.+|+++.|++.+++|++. +
T Consensus 164 ~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~-~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~ 242 (395)
T 2ib8_A 164 CAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK-GQPDVVVKEDEEYKRVDFSKVPKLKTVFQKE 242 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT-TSCCEEECSCSGGGSCCTTTGGGSCCTTCSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc-CCcceeeccccccccCCHHHHhcCCccccCC
Confidence 999999999999999999999999999999999999999999999876 66656789999999989999999999994 4
Q ss_pred CCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecc
Q 015576 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (404)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd 329 (404)
+|++|++|||+++|||+++||++++.|++++.+|+++|.|++....+|..+..++..+++++|+++|++++|||++|+||
T Consensus 243 ~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~D 322 (395)
T 2ib8_A 243 NGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVNE 322 (395)
T ss_dssp SCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECC
T ss_pred CCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCEEEEcc
Confidence 79999999999999999999999999999999999999999988766665666778999999999999999999999999
Q ss_pred cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 330 ~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+|+...+..+|.||++++|+|++||++++|||.|+||+.+++++++||++ +++|++++|++||++.++|||++
T Consensus 323 ~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~--~~~gl~~~~~ggG~g~a~~~~~~ 395 (395)
T 2ib8_A 323 AFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--GEYGLASICNGGGGASAMLIQKL 395 (395)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT--TCEEEEEEEETTTEEEEEEEEEC
T ss_pred ccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh--CCceEEEEecccCHhheEEEEcC
Confidence 99999999999999999999999999999999999999999999999997 68899999999999999999984
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-64 Score=502.23 Aligned_cols=381 Identities=39% Similarity=0.595 Sum_probs=334.7
Q ss_pred CCceEEEeeccCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCc
Q 015576 12 ARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~-~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~ 90 (404)
+++|+|||+++|||+++ .+.++++++.+|+.+|+++||+++|+++++||.+++|+..+++.+++.+..++..+|++.++
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~ 108 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETV 108 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCc
Confidence 46899999999999986 35678899999999999999999999999999999999887665667788888999996578
Q ss_pred ceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccc-ccccccccccccHH
Q 015576 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGML-KDGLWDVYNDFGMG 169 (404)
Q Consensus 91 ~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 169 (404)
|+++++++|+|++.+|..|+++|++|.+|++||+|+|.++..|..... .. .+.+. .+...+++ ..|+
T Consensus 109 p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~-----~~-----~~~~~~~~~~~~~~--~~~g 176 (418)
T 2iik_A 109 PLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG-----NI-----TSRLMEKEKARDCL--IPMG 176 (418)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC----------CC-----CTTGGGCHHHHGGG--SCHH
T ss_pred eEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc-----cc-----chhhhccccccccc--ccHH
Confidence 999999999999999999999999999999999999999986542210 00 00010 01111121 4589
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeec--CCCCC-CceeeccCCcccc-CCHHHHhcCCC
Q 015576 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMS--SGRGK-PFIIVDKDEGLEK-FDAAKLMKLRP 245 (404)
Q Consensus 170 ~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~--~~~~~-p~~~~~~d~~~~~-~~~~~~~~~~~ 245 (404)
+.+++++++||++||++|+|++++|+++.+|+..++|+++|+|++++ +.++. +...+++|+.+|+ +|+|+|+++||
T Consensus 177 ~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~ 256 (418)
T 2iik_A 177 ITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKP 256 (418)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCC
Confidence 99999999999999999999999999999999888999999998764 22221 1135788999999 99999999999
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceE
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~ 325 (404)
+|+++|++|++|++.++|||+|+||++++.|++++.+|+++|.+++.....|..+..++..+++++|+++|++++|||++
T Consensus 257 vfd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~v 336 (418)
T 2iik_A 257 AFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIF 336 (418)
T ss_dssp SSSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred cccCCCceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCee
Confidence 99999999999999999999999999999999999999999999999877777677778899999999999999999999
Q ss_pred eecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCc-eeEEeeeccccceeeeEEEeC
Q 015576 326 EINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGK-YGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 326 ~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~-~gl~~~~~~gG~~~a~ll~~~ 404 (404)
|+|++|+...+..++.||++++|+|++||.+++|||.|+||+++++++++||++++++ +||+++|++||+|.|+|||++
T Consensus 337 E~h~af~~~~~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 337 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp EECCSBHHHHHHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred eeeccchHHHHHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcCCCeeeEEEEeeccchhheEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999988 999999999999999999974
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-50 Score=409.75 Aligned_cols=353 Identities=16% Similarity=0.108 Sum_probs=265.4
Q ss_pred CCceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCC------------CCCCcHHHH
Q 015576 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA------------NLGQAPARQ 79 (404)
Q Consensus 12 ~~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~------------~~~~~~a~~ 79 (404)
.+.++|||+++|++.+..+.+++.++.+|+.+|++.||+|+|+++++||.+|.|+.... ....+.+..
T Consensus 17 PRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 96 (520)
T 4egv_A 17 PRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRS 96 (520)
T ss_dssp TTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHH
T ss_pred CCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHH
Confidence 35678999999999877778889999999999999999999999999887776654221 123457889
Q ss_pred HHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhc---CCCCCCccccccccc
Q 015576 80 AALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARK---GSRLGHDTIVDGMLK 156 (404)
Q Consensus 80 i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~---~~~~~~~~~~~~~~~ 156 (404)
++..+|++ ..+..+++.+|+|++.+++.|++.|++|.+|+||++|+|+||+.|........ +.........+.+..
T Consensus 97 va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (520)
T 4egv_A 97 VARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGY 175 (520)
T ss_dssp HHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-----------------------------
T ss_pred HHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCcccccccccccccccc
Confidence 99999998 47889999999999999999999999999999999999999998765432211 111111000000111
Q ss_pred ----cccccccc----cccHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCce
Q 015576 157 ----DGLWDVYN----DFGMGVCAEICANKHTITRD----EQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI 224 (404)
Q Consensus 157 ----~~~~~~~~----~~~~~~~a~~~~~~yg~~~~----~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~ 224 (404)
+.+..++. ...+++.+.+++.+|+++++ +++.+++++++++..||.
T Consensus 176 ~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~---------------------- 233 (520)
T 4egv_A 176 DGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPY---------------------- 233 (520)
T ss_dssp -----CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTT----------------------
T ss_pred chhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCcc----------------------
Confidence 11112221 24467788899999999976 456788888888877665
Q ss_pred eeccCCcccc-CCHHHHhcCCCCcC--CCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc-
Q 015576 225 IVDKDEGLEK-FDAAKLMKLRPSFK--EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF- 300 (404)
Q Consensus 225 ~~~~d~~~~~-~~~~~~~~~~~~~~--~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~- 300 (404)
+.+|+ +|.|++...++.+. .+++++++|||+++|||+|+||++++.|++++.+|+++|.+++.....+..+
T Consensus 234 -----a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~ 308 (520)
T 4egv_A 234 -----SSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLL 308 (520)
T ss_dssp -----SSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGG
T ss_pred -----ccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccc
Confidence 33344 89999997665542 1456789999999999999999999999999999998998888876654433
Q ss_pred -------ccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCC---CCcCCCCCccccCCcccchHHHHH
Q 015576 301 -------TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARIL 370 (404)
Q Consensus 301 -------~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~---~~vn~~Gg~~~~Gh~~gasG~~~l 370 (404)
..++..+++++|+++|++++|||++|+||+|+++.+.++|.||++. .|+|++||++++|||.+++|+..+
T Consensus 309 ~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~ 388 (520)
T 4egv_A 309 ERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGI 388 (520)
T ss_dssp GCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHH
T ss_pred cccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHH
Confidence 2355789999999999999999999999999999999999999975 489999999999999999999999
Q ss_pred HHHHHHHHhcCCceeEEeeeccc
Q 015576 371 VTLLGVLRHKKGKYGVGGICNGG 393 (404)
Q Consensus 371 ~~~~~~l~~~~~~~gl~~~~~~g 393 (404)
+++++|||++.++++|++ .++|
T Consensus 389 ~~~v~~lr~~~~~~~L~~-~~gg 410 (520)
T 4egv_A 389 AEAVNEMRDKPGQFALVG-ANGG 410 (520)
T ss_dssp HHHHHHHHHSTTCEEEEE-EEET
T ss_pred HHHHHHHhcCCCCceEEe-CCCC
Confidence 999999999999999986 4443
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=287.87 Aligned_cols=270 Identities=20% Similarity=0.257 Sum_probs=211.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC-----------------C---------CCcHHHHHHHHCCCC
Q 015576 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALGAGIP 87 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~-----------------~---------~~~~a~~i~~~lGl~ 87 (404)
.+|+.+|+++||++||+++++|| ++++|+..+.. . ....+.+++..+|++
T Consensus 78 ~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 157 (416)
T 1e5m_A 78 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK 157 (416)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC
Confidence 38999999999999999999999 79999876531 0 124688999999994
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccccc
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (404)
+|+++++++|+|++.||+.|+++|++|++|++||+|+|.+.. |.....
T Consensus 158 --gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~-~~~~~~----------------------------- 205 (416)
T 1e5m_A 158 --GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAIT-PLSYAG----------------------------- 205 (416)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH-----------------------------
T ss_pred --CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHH-----------------------------
Confidence 799999999999999999999999999999999999998533 211100
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCc
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~ 247 (404)
+...+ .+..+ . ..++..++| |+.+
T Consensus 206 --------~~~~~------------------------~ls~~--~-~~p~~~~rp---fd~~------------------ 229 (416)
T 1e5m_A 206 --------FASAR------------------------ALSFR--N-DDPLHASRP---FDKD------------------ 229 (416)
T ss_dssp --------HHHTT------------------------CBCCC--T-TCGGGTCCT---TBTT------------------
T ss_pred --------HHHcC------------------------CccCC--C-CCCcccccc---CccC------------------
Confidence 00000 00000 0 001234455 5554
Q ss_pred CCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC-----CCccccchHHHHHHHHHHcCCCCCCc
Q 015576 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~dI 322 (404)
++|++ ++|||+++||++.+.|++++.+++++|.|++..++. |........++++++|+++|++++||
T Consensus 230 -~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 301 (416)
T 1e5m_A 230 -RDGFV-------MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMV 301 (416)
T ss_dssp -CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCce-------eeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHC
Confidence 66777 799999999999999999999999999999998875 33333456889999999999999999
Q ss_pred ceEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----------------
Q 015576 323 DYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (404)
Q Consensus 323 d~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------------- 381 (404)
|++++|+.++.. ...+.+.+|....++++++.|..+||+.+|+|+.++++++++|+++.
T Consensus 302 d~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 381 (416)
T 1e5m_A 302 SYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDL 381 (416)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCS
T ss_pred CEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 999999999873 22334456655557888889999999999999999999999999852
Q ss_pred -----------CceeEEeeeccccceeeeEEEe
Q 015576 382 -----------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 -----------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++++++.++.||.++++|||+
T Consensus 382 ~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~ 414 (416)
T 1e5m_A 382 DYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK 414 (416)
T ss_dssp CCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cccCCccccCCCCEEEEccccCCCeeEEEEEEe
Confidence 2567888899999999999986
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-35 Score=289.40 Aligned_cols=271 Identities=24% Similarity=0.307 Sum_probs=215.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCC--------------------------CCCCcHHHHHHHHCCC
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSA--------------------------NLGQAPARQAALGAGI 86 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~--------------------------~~~~~~a~~i~~~lGl 86 (404)
..+|+.+|+++||+|||+++++|| ++++|+..+. ......+.+++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 467899999999999999999999 5888876421 0122367899999999
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccc
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (404)
+ +|+++++++|+|++.||+.|+++|++|++|++||+|+|.++. |.......
T Consensus 168 ~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~~~-------------------------- 218 (427)
T 3ho9_A 168 R--GPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKAST-PLGVGGFG-------------------------- 218 (427)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHHHH--------------------------
T ss_pred C--CCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHHHH--------------------------
Confidence 4 799999999999999999999999999999999999999876 32221000
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
..+.+... -..++..++| |+.+
T Consensus 219 -----------------------------------~~~~ls~~---~~~~~~~~~p---fd~~----------------- 240 (427)
T 3ho9_A 219 -----------------------------------AARALSTR---NDNPQAASRP---WDKE----------------- 240 (427)
T ss_dssp -----------------------------------HTTCBCCC---TTCHHHHCCT---TBTT-----------------
T ss_pred -----------------------------------hccCcccC---CCCCCcccCC---ccCC-----------------
Confidence 00000000 0000112334 4444
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC-----CCccccchHHHHHHHHHHcCCCCCC
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQ 321 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~d 321 (404)
.+|++ ++|||+++||++.+.|++++.+++++|.|++...+. |.....+...+++++|+++|++++|
T Consensus 241 --~~G~v-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 311 (427)
T 3ho9_A 241 --RDGFV-------LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 311 (427)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCce-------eeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 66777 799999999999999999999999999999998763 3334456689999999999999999
Q ss_pred cceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc----------------
Q 015576 322 IDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (404)
Q Consensus 322 Id~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~---------------- 380 (404)
||++++|.. +......+.+.||...++++++++|..+||+.||+|+.++++++++|+++
T Consensus 312 Id~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~ 391 (427)
T 3ho9_A 312 IGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCD 391 (427)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCC
T ss_pred ccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 999999944 44566777788888778999999999999999999999999999999976
Q ss_pred ------------CCceeEEeeeccccceeeeEEEe
Q 015576 381 ------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 381 ------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..++.+++.+++||.+.++|||+
T Consensus 392 ~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 392 LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp CBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 23677889999999999999996
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=288.28 Aligned_cols=273 Identities=24% Similarity=0.307 Sum_probs=212.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCc-cC----eEEEEeccC--------------------------CCCCCcHHHHHHHHC
Q 015576 36 SATKLGSIAIECALKRANVKPLL-VQ----EVFFGNVLS--------------------------ANLGQAPARQAALGA 84 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~-id----~li~g~~~~--------------------------~~~~~~~a~~i~~~l 84 (404)
+..+|+.+|+++||+|||+++++ +| ++++|+..+ .......+.+++..+
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 46789999999999999999998 87 578887532 112334678999999
Q ss_pred CCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccc
Q 015576 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (404)
Q Consensus 85 Gl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (404)
|+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.....
T Consensus 166 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~-------------------------- 216 (428)
T 3kzu_A 166 KL--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVS-RISLAG-------------------------- 216 (428)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH--------------------------
T ss_pred CC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCC-HHHHHH--------------------------
Confidence 99 4799999999999999999999999999999999999998654 221110
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCC
Q 015576 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (404)
Q Consensus 165 ~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~ 244 (404)
..+ ...+... -.+-+...++| |+.+
T Consensus 217 -----~~~------------------------------~~~ls~~--~~~~~~~~~~p---fd~~--------------- 241 (428)
T 3kzu_A 217 -----FAA------------------------------CKALSTE--RNDDPTAASRP---YDED--------------- 241 (428)
T ss_dssp -----HHH------------------------------TTCBCCS--CTTSGGGTCCT---TBTT---------------
T ss_pred -----HHH------------------------------ccccccC--ccCCcccccCC---cccC---------------
Confidence 000 0000000 00001223344 4444
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC-----CCccccchHHHHHHHHHHcCCCC
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEA 319 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~ 319 (404)
.+|++ ++|||+++||++.+.|++++.+++++|.|++...+. |.....+..++++++|+++|+++
T Consensus 242 ----~~G~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~ 310 (428)
T 3kzu_A 242 ----RDGFV-------MGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVP 310 (428)
T ss_dssp ----CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred ----CCcee-------ecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 56676 799999999999999999999999999999998763 33334466899999999999999
Q ss_pred CCcceEeecccchHHH----HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc---------------
Q 015576 320 SQIDYYEINEAFSVVA----IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------- 380 (404)
Q Consensus 320 ~dId~~~~hd~~~~~~----~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~--------------- 380 (404)
+|||+++.|+.++... ..+.+.+|...+++|++|+|.++||+.||+|+.++++++++|+++
T Consensus 311 ~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~ 390 (428)
T 3kzu_A 311 DEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQT 390 (428)
T ss_dssp GGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCC
T ss_pred HHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCC
Confidence 9999999997777433 334455677777899999999999999999999999999999986
Q ss_pred ------------CCceeEEeeeccccceeeeEEEe
Q 015576 381 ------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 381 ------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..++.+++.++.||.+.++|||+
T Consensus 391 ~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 425 (428)
T 3kzu_A 391 RIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRR 425 (428)
T ss_dssp SSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CcccCCCCCcCCCCCEEEEeCcccChhhEEEEEee
Confidence 12467888899999999999986
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=275.70 Aligned_cols=271 Identities=20% Similarity=0.269 Sum_probs=212.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCC-----------------CCC---------CcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSA-----------------NLG---------QAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~-----------------~~~---------~~~a~~i~~~lG 85 (404)
+..+|+.+|+++||+|||+++++|| ++++|+..+. ... ...+.+++..+|
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 152 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFG 152 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhC
Confidence 3566999999999999999999999 8999986421 111 124789999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.....
T Consensus 153 l~--gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-~~~~~~--------------------------- 202 (413)
T 3o04_A 153 AK--GINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPIT-KMSLAG--------------------------- 202 (413)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH---------------------------
T ss_pred CC--CcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCC-HHHHHH---------------------------
Confidence 94 699999999999999999999999999999999999998665 221110
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
+ ...+.+... .-++..++| |+.+
T Consensus 203 -----------------------~-----------~~~~~ls~~----~~p~~~~~p---fd~~---------------- 225 (413)
T 3o04_A 203 -----------------------F-----------TANKALSLN----PDPETACRP---FDKD---------------- 225 (413)
T ss_dssp -----------------------H-----------HHTTCBCCC----CCTTTSCCT---TBTT----------------
T ss_pred -----------------------H-----------HhcccccCC----CCCCCCcCC---CcCC----------------
Confidence 0 000001100 001334455 5554
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----CccccchHHHHHHHHHHcCCCCC
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEAS 320 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~ 320 (404)
.+|++ ++|||+++||++.+.|++++.+++++|.|++...+.. ........++++++|+++|++++
T Consensus 226 ---~~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~ 295 (413)
T 3o04_A 226 ---RDGFI-------IGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPD 295 (413)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCCce-------EeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 66777 7999999999999999999999999999999987643 22334467899999999999999
Q ss_pred CcceEeecccchHH----H-HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC--------------
Q 015576 321 QIDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------- 381 (404)
Q Consensus 321 dId~~~~hd~~~~~----~-~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~-------------- 381 (404)
|||++++|..++.. + ..+.+.++...++++++++|..+||+.||+|+.++++++++|+++.
T Consensus 296 dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~ 375 (413)
T 3o04_A 296 KVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVC 375 (413)
T ss_dssp GCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSC
T ss_pred HcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC
Confidence 99999999999873 2 2223345655668999999999999999999999999999999752
Q ss_pred -------------CceeEEeeeccccceeeeEEEe
Q 015576 382 -------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 -------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+++.+++||.+.++|||+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~ 410 (413)
T 3o04_A 376 DLDYVPNEAREANVNVVISNSFGFGGHNATLVFKR 410 (413)
T ss_dssp CSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CcccCCCcccCCCCCEEEEeCccCCceEEEEEEEe
Confidence 2567888999999999999996
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=284.51 Aligned_cols=272 Identities=23% Similarity=0.342 Sum_probs=213.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCCC--------------------------CCcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANL--------------------------GQAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~~--------------------------~~~~a~~i~~~lG 85 (404)
+..+|+.+|+++||+++|+++++||. +++|+..+.+. ....+.+++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 45789999999999999999999995 67776544210 1246789999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
++ +|+++++++|+|++.||+.|+++|++|++|++||+|+|.+.. |.....
T Consensus 150 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~--------------------------- 199 (408)
T 1j3n_A 150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PMAIGA--------------------------- 199 (408)
T ss_dssp CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH---------------------------
T ss_pred CC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHH---------------------------
Confidence 94 699999999999999999999999999999999999998654 321100
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
....+++..++.++ +..++| |+.+
T Consensus 200 ----~~~~~~ls~~~~~p---------------------------------~~~~~p---fd~~---------------- 223 (408)
T 1j3n_A 200 ----FAVMRALSTRNEEP---------------------------------EKASRP---FTLS---------------- 223 (408)
T ss_dssp ----HHHTTCBCCCTTCH---------------------------------HHHCCT---TBTT----------------
T ss_pred ----HHhcccccCCCCCC---------------------------------CcCccc---CcCC----------------
Confidence 00000000000000 112334 4443
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----CccccchHHHHHHHHHHcCCCCC
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEAS 320 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~ 320 (404)
++|++ ++|||+++||++.+.|++.+.+++++|.|++...+.. ........++++++|+++|++++
T Consensus 224 ---~dg~v-------~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~ 293 (408)
T 1j3n_A 224 ---RDGFV-------MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPE 293 (408)
T ss_dssp ---CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCceE-------EeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 56676 7999999999999999999999999999999887643 22334568899999999999999
Q ss_pred CcceEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC--------------
Q 015576 321 QIDYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------- 381 (404)
Q Consensus 321 dId~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~-------------- 381 (404)
|||++++|+.++.. ...+.+.||...++++++++|..+||+.+|+|+..+++++++|+++.
T Consensus 294 dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~ 373 (408)
T 1j3n_A 294 QVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPEL 373 (408)
T ss_dssp GCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTS
T ss_pred HcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Confidence 99999999999975 55566778877678999999999999999999999999999999741
Q ss_pred ------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+++.++.||.+.++|||+
T Consensus 374 ~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 374 DLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp CSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 3567888999999999999986
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=274.28 Aligned_cols=269 Identities=20% Similarity=0.249 Sum_probs=211.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCCC--------------------------CCcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------GQAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~~--------------------------~~~~a~~i~~~lG 85 (404)
+..+|+.+|+++||+++|+++++|| ++++|+..+... ....+.+++..+|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 170 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK 170 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence 4567999999999999999999998 688887754321 2346789999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
+ ++|+++|+++|+|++.||+.|+++|++|++|++||+|+|.++..+.....
T Consensus 171 l--~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~--------------------------- 221 (428)
T 3mqd_A 171 I--KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFD--------------------------- 221 (428)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHH---------------------------
T ss_pred C--CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHH---------------------------
Confidence 9 47999999999999999999999999999999999999998752211100
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
.. +.+... ....++..++| |+.+
T Consensus 222 ------------~~------------------------~~ls~~--~~~~p~~~~rp---fd~~---------------- 244 (428)
T 3mqd_A 222 ------------AM------------------------GAMSSK--YNDTPSTASRA---YDKN---------------- 244 (428)
T ss_dssp ------------HT------------------------TCBCCT--TTTSGGGSCCT---TBTT----------------
T ss_pred ------------Hh------------------------hhhccc--ccCCcccccCc---ccCC----------------
Confidence 00 000000 00001344555 5555
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc---cccchHHHHHHHHHHcCCCCCCc
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~agl~~~dI 322 (404)
.+|++ ++|||+++||++.+.|++++.+++++|.|++...+.... ...++.++++++|+ |++ +||
T Consensus 245 ---~~G~v-------~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dI 311 (428)
T 3mqd_A 245 ---RDGFV-------IAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKI 311 (428)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCC
T ss_pred ---CCCcc-------cccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-ccc
Confidence 77888 799999999999999999999999999999999875432 24467899999999 999 999
Q ss_pred ceEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc-----------------
Q 015576 323 DYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (404)
Q Consensus 323 d~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~----------------- 380 (404)
|+||.|..++.. ...+.+.++.....+++++.|..+||+.||+|+..++.++++|+++
T Consensus 312 d~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 391 (428)
T 3mqd_A 312 DYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFAD 391 (428)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTT
T ss_pred CEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCccccc
Confidence 999999888863 3333556675444578899999999999999999999999999975
Q ss_pred -----------CCceeEEeeeccccceeeeEEEe
Q 015576 381 -----------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 381 -----------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..++.++..++.||.+.++|||+
T Consensus 392 ~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~ 425 (428)
T 3mqd_A 392 MPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQR 425 (428)
T ss_dssp SCBCSSCEESCCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCccCCccccCCCCEEEEecCcCCcceEEEEEee
Confidence 12456788899999999999986
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-33 Score=277.18 Aligned_cols=272 Identities=22% Similarity=0.234 Sum_probs=214.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCC-CccC----eEEEEeccCCC--------------------------CCCcHHHHHHHHC
Q 015576 36 SATKLGSIAIECALKRANVKP-LLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGA 84 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~-~~id----~li~g~~~~~~--------------------------~~~~~a~~i~~~l 84 (404)
+..+|+.+|+++||++||+++ +++| ++++|+..+.. .....+.+++..+
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 356799999999999999998 8887 58999875531 1224788999999
Q ss_pred CCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccc
Q 015576 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (404)
Q Consensus 85 Gl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (404)
|++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.....
T Consensus 176 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~-------------------------- 226 (438)
T 2iwz_A 176 KLK--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLSLAG-------------------------- 226 (438)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH--------------------------
T ss_pred CCC--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHHHHH--------------------------
Confidence 994 699999999999999999999999999999999999998654 321110
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCC
Q 015576 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (404)
Q Consensus 165 ~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~ 244 (404)
+... +.+.. ...++..++| |+.+
T Consensus 227 -----------~~~~------------------------~~ls~----~~~p~~~~~p---fd~~--------------- 249 (438)
T 2iwz_A 227 -----------FSRA------------------------RALST----NSDPKLACRP---FHPK--------------- 249 (438)
T ss_dssp -----------HHHT------------------------TCBCC----CSCTTTSCCT---TCTT---------------
T ss_pred -----------HHhc------------------------CCcCC----CCCCCccccc---CCCC---------------
Confidence 0000 00100 0012344556 5555
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC-----CCccccchHHHHHHHHHHcCCCC
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEA 319 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~ 319 (404)
++|++ ++|||+++||++.+.|++++.+++++|.|++..++. |........++++++|+++|+++
T Consensus 250 ----~~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p 318 (438)
T 2iwz_A 250 ----RDGFV-------MGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQP 318 (438)
T ss_dssp ----CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred ----CCCEE-------eeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 67777 799999999999999999999999999999998875 33233456889999999999999
Q ss_pred CCcceEeecccchHH----H-HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-------------
Q 015576 320 SQIDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------- 381 (404)
Q Consensus 320 ~dId~~~~hd~~~~~----~-~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~------------- 381 (404)
+|||++++|+.++.. + ..+.+.+|....++++++.|..+||+.+|+|+.++++++++|+++.
T Consensus 319 ~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~ 398 (438)
T 2iwz_A 319 EEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPE 398 (438)
T ss_dssp GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTT
T ss_pred HHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCC
Confidence 999999999999874 2 2334456655557888899999999999999999999999999852
Q ss_pred -----------------CceeEEeeeccccceeeeEEEeC
Q 015576 382 -----------------GKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 382 -----------------~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
.++++++.++.||.+..+|||+.
T Consensus 399 ~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 399 FDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp CCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred CCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEeeC
Confidence 35678888999999999999973
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-33 Score=276.33 Aligned_cols=270 Identities=20% Similarity=0.267 Sum_probs=213.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC--------------------------CCCcHHHHHHHHCCC
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~--------------------------~~~~~a~~i~~~lGl 86 (404)
..+|+.+|+++||++||+++++|| .+++|+..+.. .....+.+++..+|+
T Consensus 98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (437)
T 2gqd_A 98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA 177 (437)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence 567999999999999999999999 99999876531 012467899999999
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccc
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (404)
+ +|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.....
T Consensus 178 ~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~---------------------------- 226 (437)
T 2gqd_A 178 K--GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HMAIAG---------------------------- 226 (437)
T ss_dssp C--SSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH----------------------------
T ss_pred C--CceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH----------------------------
Confidence 4 699999999999999999999999999999999999998654 321110
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
+. ..+.+... .-++..++| |+++
T Consensus 227 ----------------------~~-----------~~~~ls~~----~~p~~~~~p---fd~~----------------- 249 (437)
T 2gqd_A 227 ----------------------FS-----------ASRALSTN----DDIETACRP---FQEG----------------- 249 (437)
T ss_dssp ----------------------HH-----------HTTCBCCC----CCTTTSSCT---TCTT-----------------
T ss_pred ----------------------HH-----------hccCccCC----CCCccccCC---CCCC-----------------
Confidence 00 00000000 001234455 5544
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc-----cccchHHHHHHHHHHcCCCCCC
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQ 321 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~d 321 (404)
.+|++ ++|||+++||++.+.|++++.+++++|.|++..++.... ......++++++|+++|++++|
T Consensus 250 --~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~d 320 (437)
T 2gqd_A 250 --RDGFV-------MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 320 (437)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCce-------eeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhh
Confidence 56676 799999999999999999999999999999998875432 2334578999999999999999
Q ss_pred cceEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC---------------
Q 015576 322 IDYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------------- 381 (404)
Q Consensus 322 Id~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--------------- 381 (404)
||+|++|+.++.. ...+.+.+|....++++++.|..+||+.+|+|+.++++++++|+++.
T Consensus 321 Id~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~ 400 (437)
T 2gqd_A 321 VQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECD 400 (437)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCC
T ss_pred CCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 9999999999975 22334556765567888899999999999999999999999999752
Q ss_pred ------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++++++.++.||.+.++|||+
T Consensus 401 ~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 434 (437)
T 2gqd_A 401 LDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKK 434 (437)
T ss_dssp SBCCBSSCEECCCSEEEEEEECGGGEEEEEEEEC
T ss_pred cccCCCccccCCCCEEEEccCcCCCeeEEEEEEe
Confidence 2567888899999999999986
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=272.08 Aligned_cols=271 Identities=23% Similarity=0.259 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC--------------CC-------------Cc-HHH----HH
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------LG-------------QA-PAR----QA 80 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~--------------~~-------------~~-~a~----~i 80 (404)
..+|+.+|+++||++||+++++|| ++++|+..+.+ .+ ++ .+. ++
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 457999999999999999999999 69999876532 00 11 134 89
Q ss_pred HHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccc
Q 015576 81 ALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW 160 (404)
Q Consensus 81 ~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (404)
+..+|++ +|+++++++|+|++.||+.|+++|++|++|++||+|+|.+.. |.....
T Consensus 153 a~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~---------------------- 207 (424)
T 1tqy_A 153 AWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIVVAC---------------------- 207 (424)
T ss_dssp HHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH----------------------
T ss_pred HHhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HHHHHH----------------------
Confidence 9999994 699999999999999999999999999999999999998654 321100
Q ss_pred cccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHH
Q 015576 161 DVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240 (404)
Q Consensus 161 ~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~ 240 (404)
+...+ .+... -..++..++| |+.+
T Consensus 208 ---------------~~~~~------------------------~ls~~---~~~p~~~~rp---fd~~----------- 231 (424)
T 1tqy_A 208 ---------------FDAIR------------------------ATTAR---NDDPEHASRP---FDGT----------- 231 (424)
T ss_dssp ---------------HHHTT------------------------CBCCC---CSCGGGCCCT---TBTT-----------
T ss_pred ---------------HHhhc------------------------cccCC---CCCCCCCccC---CCCC-----------
Confidence 00000 00000 0001234455 5544
Q ss_pred hcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC-----ccccchHHHHHHHHHHc
Q 015576 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANA 315 (404)
Q Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~a 315 (404)
.+|++ ++|||+++||++.+.|++++.+++++|.|++..++... .......++++++|+++
T Consensus 232 --------~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~a 296 (424)
T 1tqy_A 232 --------RDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDES 296 (424)
T ss_dssp --------CCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHH
T ss_pred --------CCcee-------eecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 56777 79999999999999999999999999999999887532 22345688999999999
Q ss_pred CCCCCCcceEeecccchHH----H-HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc----------
Q 015576 316 GLEASQIDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------- 380 (404)
Q Consensus 316 gl~~~dId~~~~hd~~~~~----~-~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~---------- 380 (404)
|++++|||++++|+.++.. + ..+.+.++....++++++.|..+||+.+|+|+.++++++++|+++
T Consensus 297 gl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~ 376 (424)
T 1tqy_A 297 RTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRT 376 (424)
T ss_dssp TCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCS
T ss_pred CCCHHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCC
Confidence 9999999999999999874 2 233344554444678888899999999999999999999999986
Q ss_pred -----------------CCceeEEeeeccccceeeeEEEe
Q 015576 381 -----------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 381 -----------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..++.+++.++.||.+.++|||+
T Consensus 377 ~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~ 416 (424)
T 1tqy_A 377 SDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD 416 (424)
T ss_dssp BBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEcc
Confidence 24678889999999999999985
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-32 Score=267.84 Aligned_cols=268 Identities=22% Similarity=0.194 Sum_probs=208.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC--------------------------CCCcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~--------------------------~~~~~a~~i~~~lG 85 (404)
+..+|+.+|+++||+++|+++++|| ++++|+..+.+ .....+.+++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 3578999999999999999999999 78998875432 12457889999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
++ +|+++++++|+|++.||+.|+++|++| +|++||+|+|.+.. |.....
T Consensus 158 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~-~~~~~~--------------------------- 206 (415)
T 1tqy_B 158 MR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD-PWGWVS--------------------------- 206 (415)
T ss_dssp CC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCS-HHHHHH---------------------------
T ss_pred CC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCC-HHHHHH---------------------------
Confidence 94 699999999999999999999999999 99999999998543 211100
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
+. ..+.+... ..++..++| |+.+
T Consensus 207 -----------------------~~-----------~~~~ls~~----~~~~~~~~p---fd~~---------------- 229 (415)
T 1tqy_B 207 -----------------------QI-----------ASGRISTA----TDPDRAYLP---FDER---------------- 229 (415)
T ss_dssp -----------------------HH-----------TTSCBCCC----SCGGGSCCT---TSTT----------------
T ss_pred -----------------------HH-----------hccCccCC----CCCCCCcCC---CCCC----------------
Confidence 00 00000000 001233444 5444
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCC-CceEEEEeeEEeccCCCcccc--chHHHHHHHHHHcCCCCCCc
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAAQAPEWFTT--APSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~-~~~~~i~g~~~~~~~~~~~~~--~~~~a~~~al~~agl~~~dI 322 (404)
.+|++ ++|||+++||++.+.+++++. +++++|.|++...+....... +..++++++|+++|++++||
T Consensus 230 ---~~G~~-------~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dI 299 (415)
T 1tqy_B 230 ---AAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDV 299 (415)
T ss_dssp ---CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGC
T ss_pred ---CCCcc-------eeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHC
Confidence 66776 799999999999999999999 999999999998875432211 67899999999999999999
Q ss_pred ceEeecccchH----HHHHHHH-HhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc-----------------
Q 015576 323 DYYEINEAFSV----VAIANQK-LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (404)
Q Consensus 323 d~~~~hd~~~~----~~~~~~e-~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~----------------- 380 (404)
|+++.|..++. .+...++ .+|- .++.+++.|..+||+.||+|+.++++++++|+++
T Consensus 300 d~ve~Hgtgt~~~D~~E~~al~~~~g~--~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~ 377 (415)
T 1tqy_B 300 DVVFADGAGVPELDAAEARAIGRVFGR--EGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGI 377 (415)
T ss_dssp CEEECCCCCSHHHHHHHHHHHHHHHCT--TCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCC
T ss_pred CEEEEeCCCCcCcCHHHHHHHHHHhCC--CCceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 99999999985 2333333 3443 3466677788899999999999999999999984
Q ss_pred ----------CCceeEEeeeccccceeeeEEEe
Q 015576 381 ----------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 381 ----------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..++.+++.++.||.+.++|||+
T Consensus 378 ~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~ 410 (415)
T 1tqy_B 378 DLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR 410 (415)
T ss_dssp EECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred cccCCCCccCCCCEEEEecCcCCCeEEEEEEec
Confidence 23577888999999999999986
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-32 Score=270.43 Aligned_cols=272 Identities=24% Similarity=0.288 Sum_probs=209.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCcc-C----eEEEEeccCC--------------------------CCCCcHHHHHHHHC
Q 015576 36 SATKLGSIAIECALKRANVKPLLV-Q----EVFFGNVLSA--------------------------NLGQAPARQAALGA 84 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~i-d----~li~g~~~~~--------------------------~~~~~~a~~i~~~l 84 (404)
+..+|+.+|+++||+|||+++++| | ++++|+..+. ......+.+++..+
T Consensus 101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 356799999999999999999999 7 6888876431 11234678999999
Q ss_pred CCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccc
Q 015576 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (404)
Q Consensus 85 Gl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (404)
|+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 181 gl--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~-~~~~~~-------------------------- 231 (451)
T 4ddo_A 181 RF--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFD-KVSLGG-------------------------- 231 (451)
T ss_dssp TC--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH--------------------------
T ss_pred cC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccC-HHHHHH--------------------------
Confidence 99 4699999999999999999999999999999999999999776 321110
Q ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCC
Q 015576 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (404)
Q Consensus 165 ~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~ 244 (404)
+. ........ +..+ | ...++| |+.+
T Consensus 232 ------------------------~~------~~~~ls~~-~~~~--~----~~~~~p---fd~~--------------- 256 (451)
T 4ddo_A 232 ------------------------FA------AARALSTG-FSEE--P----VRASRP---FDRD--------------- 256 (451)
T ss_dssp ------------------------HH------HTTCBCCS-CTTS--G----GGSCCT---TBTT---------------
T ss_pred ------------------------HH------HHhhhccC-CCcC--c----cccccc---cccC---------------
Confidence 00 00000000 0111 1 123344 5544
Q ss_pred CCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc-----ccchHHHHHHHHHHcCCCC
Q 015576 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTAPSLAIPKAIANAGLEA 319 (404)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~agl~~ 319 (404)
++|++ ++|||+|+||++.+.|++++.+++++|.|++...+..... .....++++++|+++|+++
T Consensus 257 ----~~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~ 325 (451)
T 4ddo_A 257 ----RDGFV-------MGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAP 325 (451)
T ss_dssp ----CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred ----CCCcE-------EeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 66676 7999999999999999999999999999999987543221 2244789999999999999
Q ss_pred CCcceEeecccchHH----H-HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc--------------
Q 015576 320 SQIDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK-------------- 380 (404)
Q Consensus 320 ~dId~~~~hd~~~~~----~-~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~-------------- 380 (404)
+|||++++|..++.. + ..+.+.++. ..++++++.|..+||+.||+|+.++++++++|+++
T Consensus 326 ~dId~ve~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~ 404 (451)
T 4ddo_A 326 EQVDYVNAHATSTPVGDAGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPA 404 (451)
T ss_dssp GGCCEEECCCCSCHHHHHHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGG
T ss_pred HHcCEEEecCCcCcccCHHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcc
Confidence 999999999999863 2 223344565 44688889999999999999999999999999975
Q ss_pred --------------CCceeEEeeeccccceeeeEEEe
Q 015576 381 --------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 381 --------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..++.+++.++.||.+.++|||+
T Consensus 405 ~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~ 441 (451)
T 4ddo_A 405 ADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRR 441 (451)
T ss_dssp GTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEE
T ss_pred cccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEee
Confidence 12457788899999999999986
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-32 Score=267.94 Aligned_cols=267 Identities=22% Similarity=0.260 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCCC-----------------C---------CcHHHHHHHHCCC
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL-----------------G---------QAPARQAALGAGI 86 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~~-----------------~---------~~~a~~i~~~lGl 86 (404)
..+|+.+|+++||++||+ +++| ++++|+..+.+. . ...+.+++..+|+
T Consensus 83 ~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 160 (416)
T 2wge_A 83 VQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA 160 (416)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence 346999999999999998 4555 388988765431 1 1357889999999
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccc
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (404)
++|+++++++|+|++.||+.|+++|++|++|++||+|+|.++. +.....
T Consensus 161 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~-~~~~~~---------------------------- 209 (416)
T 2wge_A 161 --RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIE-ALPIAA---------------------------- 209 (416)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCC-HHHHHH----------------------------
T ss_pred --CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccc-hHHHHH----------------------------
Confidence 4799999999999999999999999999999999999999876 211100
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
..+.+++..|+.+ ++..++| |+++
T Consensus 210 ---~~~~~~l~~~~~~---------------------------------~~~~~~p---fd~~----------------- 233 (416)
T 2wge_A 210 ---FSMMRAMSTRNDE---------------------------------PERASRP---FDKD----------------- 233 (416)
T ss_dssp ---HHTTTCBCCCTTS---------------------------------GGGSCCT---TBTT-----------------
T ss_pred ---HHhcchhhccccC---------------------------------Ccccccc---cccC-----------------
Confidence 0000000000000 1223344 4433
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----CccccchHHHHHHHHHHcCCCCCC
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~d 321 (404)
.+|++ ++||++++||++.+.+++++.+++++|.|++...+.. ........++++++|+++|++++|
T Consensus 234 --~dg~v-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~d 304 (416)
T 2wge_A 234 --RDGFV-------FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPAD 304 (416)
T ss_dssp --CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCcc-------ccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHH
Confidence 55665 7999999999999999999999999999999887642 233446688999999999999999
Q ss_pred cceEeecccchHH----HHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----------------
Q 015576 322 IDYYEINEAFSVV----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (404)
Q Consensus 322 Id~~~~hd~~~~~----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------------- 381 (404)
||++++|+.++.. +...++.+|. .+++++++|..+||+.||+|+.++++++++|+++.
T Consensus 305 Id~ve~HgtgT~~gD~~E~~al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~ 382 (416)
T 2wge_A 305 IDHVNAHGTATPIGDAAEANAIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDL 382 (416)
T ss_dssp CCEEECCCCCCHHHHHHHHHHHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCC
T ss_pred CCEEEECCCCCcCCCHHHHHHHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 9999999999975 4444555543 26888999999999999999999999999999852
Q ss_pred -----------CceeEEeeeccccceeeeEEEe
Q 015576 382 -----------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 -----------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+++.++.||.+.++|||+
T Consensus 383 ~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 383 DVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp EECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 2467888899999999999986
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-31 Score=263.27 Aligned_cols=270 Identities=22% Similarity=0.285 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHHcCCC---CCccCeEEEEeccCCCC--------------------------CCcHHHHHHHHCCCC
Q 015576 37 ATKLGSIAIECALKRANVK---PLLVQEVFFGNVLSANL--------------------------GQAPARQAALGAGIP 87 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~---~~~id~li~g~~~~~~~--------------------------~~~~a~~i~~~lGl~ 87 (404)
..+|+.+|+++||++||++ +++| .+++|+..+.+. ....+.+++..+|+
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl- 176 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA- 176 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC-
Confidence 4679999999999999983 3333 578888765430 11357899999999
Q ss_pred CCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccccc
Q 015576 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (404)
Q Consensus 88 ~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (404)
++|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 177 -~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~----------------------------- 225 (434)
T 2gp6_A 177 -KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIE-AVPIAG----------------------------- 225 (434)
T ss_dssp -CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCC-HHHHHH-----------------------------
T ss_pred -CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH-----------------------------
Confidence 4799999999999999999999999999999999999999876 211100
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCC-cccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSG-LFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~-~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
+. ..+ .+..+ . ..++..++| |+.+
T Consensus 226 ---------------------~~-----------~~~~~ls~~--~-~~p~~~~~p---fd~~----------------- 250 (434)
T 2gp6_A 226 ---------------------FA-----------QMRIVMSTN--N-DDPAGACRP---FDRD----------------- 250 (434)
T ss_dssp ---------------------HH-----------TTTSSCCCC--T-TCTTTSCCS---SBTT-----------------
T ss_pred ---------------------HH-----------HHHHHhcCC--C-CCCCCceec---cccc-----------------
Confidence 00 000 00000 0 001234455 5544
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----CccccchHHHHHHHHHHcCCCCCC
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~d 321 (404)
.+|++ ++|||+++||++.+.+++.+.+++++|.|++...+.. ........++++++|+++|++++|
T Consensus 251 --~~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 321 (434)
T 2gp6_A 251 --RDGFV-------FGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGD 321 (434)
T ss_dssp --CCCCC-------BBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTT
T ss_pred --CCCcc-------eecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHH
Confidence 56666 7999999999999999888989999999999987643 223345688999999999999999
Q ss_pred cceEeecccchHH-HHHHHHHhC--CCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-----------------
Q 015576 322 IDYYEINEAFSVV-AIANQKLLG--LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------------- 381 (404)
Q Consensus 322 Id~~~~hd~~~~~-~~~~~e~lg--~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~----------------- 381 (404)
||++++|...+.. .....+.++ +...++|++++|.++||+.||+|+.++++++++|+++.
T Consensus 322 Id~ve~Hgtgt~~~D~~E~~al~~~fg~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~ 401 (434)
T 2gp6_A 322 IDHVNAHATGTQVGDLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLD 401 (434)
T ss_dssp EEEEECCCCSCHHHHHHHHHHHHHHHTTCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCE
T ss_pred cCEEEEeCCcCccchHHHHHHHHHHhccCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc
Confidence 9999999655543 223333332 12237999999999999999999999999999999862
Q ss_pred ----------CceeEEeeeccccceeeeEEEe
Q 015576 382 ----------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ----------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+++.++.||.+.++|||+
T Consensus 402 ~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 402 VVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp ECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 2467888899999999999986
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-31 Score=266.92 Aligned_cols=274 Identities=21% Similarity=0.269 Sum_probs=209.2
Q ss_pred CCHHHHHHHHHHHHHHHcCC-CCCccC----eEEEEeccCCC-----------------C---------CCcHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANV-KPLLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALG 83 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi-~~~~id----~li~g~~~~~~-----------------~---------~~~~a~~i~~~ 83 (404)
.+..+|+.+|+++||++||+ +++++| .+++|+..+.. . ....+.+++..
T Consensus 86 d~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~ 165 (431)
T 2ix4_A 86 ANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMK 165 (431)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHH
Confidence 34678999999999999999 888888 68998875431 0 12467899999
Q ss_pred CCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccc
Q 015576 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (404)
Q Consensus 84 lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (404)
+|++ +|+++++++|+|++.||+.|+++|++|++|++||+|+|.++. |..... +
T Consensus 166 lgl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~--------------------~---- 218 (431)
T 2ix4_A 166 YGFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSID-ALSVAG--------------------F---- 218 (431)
T ss_dssp HTCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH--------------------H----
T ss_pred HCCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH--------------------H----
Confidence 9994 699999999999999999999999999999999999999876 211100 0
Q ss_pred ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcC
Q 015576 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (404)
Q Consensus 164 ~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~ 243 (404)
..+++++ .+|+.+ | +..++| |+.+
T Consensus 219 --~~~~~ls----~~~~~~-----------------------------~----~~~~~p---fd~~-------------- 242 (431)
T 2ix4_A 219 --SRSRALS----TKFNSS-----------------------------P----QEASRP---FDCD-------------- 242 (431)
T ss_dssp --HHTTCBC----CTTTTC-----------------------------G----GGSCCT---TBTT--------------
T ss_pred --HhccccC----ccccCC-----------------------------c----cccccc---CCCC--------------
Confidence 0000000 000110 0 223344 4433
Q ss_pred CCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCC-----CccccchHHHHHHHHHHcCCC
Q 015576 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLE 318 (404)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~ 318 (404)
.+|++ ++|||+++||++.+.+++++.+++++|.|++..++.. ........++++++|+++|++
T Consensus 243 -----~~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~ 310 (431)
T 2ix4_A 243 -----RDGFV-------IGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLC 310 (431)
T ss_dssp -----CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred -----CCCce-------eecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 55666 8999999999999999999999999999999987643 223345688999999999999
Q ss_pred CCCcceEeecccchHH----HH-HHHHHhCCC--CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC----------
Q 015576 319 ASQIDYYEINEAFSVV----AI-ANQKLLGLD--PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------- 381 (404)
Q Consensus 319 ~~dId~~~~hd~~~~~----~~-~~~e~lg~~--~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------- 381 (404)
++|||++++|..++.. +. .+.+.++.. ..+++++++|.++||+.+|+|+.++++++++|+++.
T Consensus 311 ~~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~ 390 (431)
T 2ix4_A 311 PNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 390 (431)
T ss_dssp GGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSB
T ss_pred HHHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCC
Confidence 9999999999988763 22 223334422 246888899999999999999999999999999852
Q ss_pred ------------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ------------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ------------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++++++.++.||.+..+|||+
T Consensus 391 ~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 391 DPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp CTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 2567888899999999999986
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-31 Score=262.26 Aligned_cols=267 Identities=21% Similarity=0.261 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHHHHcCC-CCCccC----eEEEEeccCCC--------------------------CCCcHHHHHHHHCC
Q 015576 37 ATKLGSIAIECALKRANV-KPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi-~~~~id----~li~g~~~~~~--------------------------~~~~~a~~i~~~lG 85 (404)
..+|+.+|+++||++||+ +++++| ++++|+..+.. .....+.+++..+|
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 567999999999999999 788888 78888765320 12346889999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
++ +|+++|+++|+|++.||+.|+++|++|++|++||+|+|.++..+.....
T Consensus 157 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~--------------------------- 207 (412)
T 4ewg_A 157 LK--GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFD--------------------------- 207 (412)
T ss_dssp CC--SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHH---------------------------
T ss_pred CC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHH---------------------------
Confidence 94 6999999999999999999999999999999999999996641110000
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~ 245 (404)
....+... ..-++..++| ||.+
T Consensus 208 ------------------------------------~~~~l~~~---~~~p~~~~rp---fd~~---------------- 229 (412)
T 4ewg_A 208 ------------------------------------TLYATSTR---NDEPHLTPRP---FDAK---------------- 229 (412)
T ss_dssp ------------------------------------TTTCBCCC---TTCGGGCCCT---TBTT----------------
T ss_pred ------------------------------------HhhccccC---CCCCCCCCCC---CCCC----------------
Confidence 00000000 0001234455 5554
Q ss_pred CcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc---cccchHHHHHHHHHHcCCCCCCc
Q 015576 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~agl~~~dI 322 (404)
++|++ ++|||+++||++.+.|++++.+++++|.|++...+.... ...+..++++++|+++|++++||
T Consensus 230 ---~~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dI 299 (412)
T 4ewg_A 230 ---RDGLV-------VGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAI 299 (412)
T ss_dssp ---CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGE
T ss_pred ---CCCCc-------eECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence 67777 799999999999999999999999999999998874322 23456789999999999999999
Q ss_pred ceEeecccchHH----HHHH-HHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc-----------------
Q 015576 323 DYYEINEAFSVV----AIAN-QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (404)
Q Consensus 323 d~~~~hd~~~~~----~~~~-~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~----------------- 380 (404)
|+|+.|...+.. +... .+.++ .++++++.|..+||+.||+|+.++++++++|+++
T Consensus 300 d~ve~Hgtgt~~~D~~E~~al~~~~~---~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~ 376 (412)
T 4ewg_A 300 AYVNAHGTSTDRGDVAESQATARTFG---ERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAP 376 (412)
T ss_dssp EEEECCCCCCHHHHHHHHHHHHHHHC---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC
T ss_pred CEEEccCCCCccccHHHHHHHHHHcC---CCCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccc
Confidence 999999998873 2222 23444 2367777899999999999999999999999974
Q ss_pred -----------CCceeEEeeeccccceeeeEEEe
Q 015576 381 -----------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 381 -----------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
..++.+++.+++||.+.++||++
T Consensus 377 ~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~ 410 (412)
T 4ewg_A 377 LDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRR 410 (412)
T ss_dssp CEECCSSCEECCCSEEEEEEEEGGGEEEEEEEEC
T ss_pred cccccCcccCCCCCEEEEeeecCCcceEEEEEee
Confidence 12467889999999999999986
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=263.60 Aligned_cols=267 Identities=24% Similarity=0.313 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC--------------------------CCCcHHHHHHHHCCC
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~--------------------------~~~~~a~~i~~~lGl 86 (404)
..+|+.+|+++||+++|+++++|| ++++|+..+.. .....+.+++..+|+
T Consensus 93 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 172 (430)
T 1ox0_A 93 YSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA 172 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC
Confidence 347999999999999999999999 58888775531 011367899999999
Q ss_pred CCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccc
Q 015576 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (404)
Q Consensus 87 ~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (404)
+ +|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.....
T Consensus 173 ~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~---------------------------- 221 (430)
T 1ox0_A 173 N--GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PFAIAG---------------------------- 221 (430)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH----------------------------
T ss_pred C--CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH----------------------------
Confidence 5 699999999999999999999999999999999999998664 321100
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCC
Q 015576 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (404)
Q Consensus 167 ~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~ 246 (404)
+.. .+.+... ..++..++| |+++
T Consensus 222 ---------~~~------------------------~~~ls~~----~~p~~~~~p---Fd~~----------------- 244 (430)
T 1ox0_A 222 ---------FQA------------------------LTALSTT----EDPTRASIP---FDKD----------------- 244 (430)
T ss_dssp ---------HHH------------------------TTCBCCC----SSTTSSSCT---TBTT-----------------
T ss_pred ---------HHh------------------------CCCccCC----CCCCCCCCC---CCCC-----------------
Confidence 000 0000000 001334455 5544
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC-----ccccchHHHHHHHHHHcCCCCCC
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQ 321 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~d 321 (404)
.+|++ ++|||+++||++.+.|++++.+++++|.|++...+... .......++++++|+++|++++|
T Consensus 245 --~~g~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 315 (430)
T 1ox0_A 245 --RNGFV-------MGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQ 315 (430)
T ss_dssp --CCSBC-------BCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCcc-------ccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHH
Confidence 56676 79999999999999999999999999999998876432 23345688999999999999999
Q ss_pred cceEeecccchHHHH-----HHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC---------------
Q 015576 322 IDYYEINEAFSVVAI-----ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------------- 381 (404)
Q Consensus 322 Id~~~~hd~~~~~~~-----~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--------------- 381 (404)
||++++|+.++.... .+.+.+|- ++.++..|..+||+.+|+|+.++++++++|+++.
T Consensus 316 Id~ve~Hgtgt~~~D~~E~~al~~~~g~---~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~ 392 (430)
T 1ox0_A 316 VAYVNAHGTSTPANEKGESGAIVAVLGK---EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIE 392 (430)
T ss_dssp CCCEECCCCSCHHHHHHHHHHHHHHHCS---SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCC
T ss_pred cCEEEEeCCcCcccCHHHHHHHHHHhCC---CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 999999999997642 23344553 3444455666899999999999999999999862
Q ss_pred ------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+++.++.||.+.++|||+
T Consensus 393 ~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 426 (430)
T 1ox0_A 393 ANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 426 (430)
T ss_dssp SEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cccCCCCCcCCCCCEEEEeCccCCCceEEEEEee
Confidence 2567888899999999999986
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=257.96 Aligned_cols=267 Identities=21% Similarity=0.252 Sum_probs=207.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCe-----EEEEeccCCC-------------C--------------CCcHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQE-----VFFGNVLSAN-------------L--------------GQAPARQAALG 83 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~-----li~g~~~~~~-------------~--------------~~~~a~~i~~~ 83 (404)
+..+|+.+++++||++||++++++|. +++|+..+.. . ....+.+++..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 36779999999999999999888886 9999876542 1 12467899999
Q ss_pred CCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccc
Q 015576 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (404)
Q Consensus 84 lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (404)
+|++ +|+++++++|+|++.||+.|+++|++|++|++||+|+|.++. |....
T Consensus 150 lgl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~~~-------------------------- 200 (406)
T 2vba_A 150 FKIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW-EMACE-------------------------- 200 (406)
T ss_dssp TTCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH-HHHHH--------------------------
T ss_pred ccCC--CceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-hHHHH--------------------------
Confidence 9994 799999999999999999999999999999999999999875 21100
Q ss_pred ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcC
Q 015576 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (404)
Q Consensus 164 ~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~ 243 (404)
+..+| .+..+. . .-++..++| |+++
T Consensus 201 ------------~~~~~------------------------~ls~~~-~-~~p~~~~~p---fd~~-------------- 225 (406)
T 2vba_A 201 ------------FDAMG------------------------ALSTKY-N-DTPEKASRT---YDAH-------------- 225 (406)
T ss_dssp ------------HHHTT------------------------CBCCSC-T-TSGGGSCCT---TBTT--------------
T ss_pred ------------Hhhcc------------------------cccccc-C-CCCccccCc---CcCC--------------
Confidence 00111 000000 0 001234556 6665
Q ss_pred CCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc---ccchHHHHHHHHHHcCCCCC
Q 015576 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF---TTAPSLAIPKAIANAGLEAS 320 (404)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~---~~~~~~a~~~al~~agl~~~ 320 (404)
++|++ ++|||+++||++.+.|++++.+++++|.|++..++..... ..+..++++++|+++| +
T Consensus 226 -----~~G~v-------~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~ 290 (406)
T 2vba_A 226 -----RDGFV-------IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---T 290 (406)
T ss_dssp -----CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---S
T ss_pred -----CCceE-------eeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---C
Confidence 67787 7999999999999999999999999999999988743221 3456889999999999 9
Q ss_pred CcceEeecccchHH-HH----HHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC--------------
Q 015576 321 QIDYYEINEAFSVV-AI----ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------- 381 (404)
Q Consensus 321 dId~~~~hd~~~~~-~~----~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~-------------- 381 (404)
|||+++.|+.++.. +. .+.+.+|.. ++++++.|..+||+.+|+|+.++++++++|+++.
T Consensus 291 dId~ve~HgtgT~~gD~~E~~al~~~fg~~--~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~ 368 (406)
T 2vba_A 291 PIDYLNSHGTSTPVGDVKELAAIREVFGDK--SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQA 368 (406)
T ss_dssp CCCEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTC
T ss_pred CccEEEeeCccCcccCHHHHHHHHHHhCcC--CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCc
Confidence 99999999999874 22 233445543 3566777888999999999999999999999853
Q ss_pred -------------CceeEEeeeccccceeeeEEEe
Q 015576 382 -------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 -------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+++.++.||.+..+|||+
T Consensus 369 ~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 403 (406)
T 2vba_A 369 AGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 403 (406)
T ss_dssp TTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEe
Confidence 2467888899999999999986
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=247.59 Aligned_cols=257 Identities=16% Similarity=0.113 Sum_probs=203.0
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCc
Q 015576 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (404)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas 101 (404)
+|++.+++...++++..+|+.+|+++||+++|+++++||.+++++..+++..+..+.+++..+|++ .+|+++++++|+|
T Consensus 36 ~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCas 114 (313)
T 1zow_A 36 MTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTG-KVASMDQLAACSG 114 (313)
T ss_dssp HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCC-SCCEEEEECGGGH
T ss_pred hhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEEEECCcCHH
Confidence 566666666667899999999999999999999999999999999887766677899999999997 4899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCC
Q 015576 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (404)
Q Consensus 102 ~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~ 181 (404)
++.||..|+.+|++|.++++||+|+|.++... .
T Consensus 115 ~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~--~--------------------------------------------- 147 (313)
T 1zow_A 115 FMYSMITAKQYVQSGDYHNILVVGADKLSKIT--D--------------------------------------------- 147 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTC--C---------------------------------------------
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEccccccc--C---------------------------------------------
Confidence 99999999999999999999999999877510 0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcc
Q 015576 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (404)
Q Consensus 182 ~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (404)
| +++ .++++ +
T Consensus 148 ------------------------------~-------------~d~--------------------~~~~~-------~ 157 (313)
T 1zow_A 148 ------------------------------L-------------TDR--------------------STAVL-------F 157 (313)
T ss_dssp ------------------------------T-------------TCH--------------------HHHTT-------B
T ss_pred ------------------------------c-------------ccc--------------------cceee-------e
Confidence 0 000 01133 7
Q ss_pred ccccceeeecCHHHHHHcCCCceEE-EEeeEEeccC---CC------ccc--------cchHHHHHHHHHHcCCCCCCcc
Q 015576 262 SDGAAALVLVSGVKALELGLQVIAK-IRGFADAAQA---PE------WFT--------TAPSLAIPKAIANAGLEASQID 323 (404)
Q Consensus 262 ~DGAaA~vL~~~~~a~~~~~~~~~~-i~g~~~~~~~---~~------~~~--------~~~~~a~~~al~~agl~~~dId 323 (404)
+|||+|+||++.+. +.+++.. +.+.+...+. +. ... ....++++++|+++|++++|||
T Consensus 158 gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did 233 (313)
T 1zow_A 158 GDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDID 233 (313)
T ss_dssp CEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCS
T ss_pred ccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999986542 1122221 2222111110 11 000 1346789999999999999999
Q ss_pred eEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 324 YYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
++++|++++.....+.+.||++++++..+ +..+||+.+++++..+.+++++-+.+++++.+...+++|..+.++||+
T Consensus 234 ~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~as~~~~L~~~~~~~~~~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 234 LFIPHQANIRIMESARERLGISKDKMSVS--VNKYGNTSAASIPLSIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp EEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred EEEEcCCCHHHHHHHHHHhCCCHHHHHHh--HhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEE
Confidence 99999999999999999999988776543 778999999999999999888766667889998888888888999987
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-29 Score=270.64 Aligned_cols=267 Identities=21% Similarity=0.271 Sum_probs=215.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCCCC------------------CcHHHHHHHHCCCCCCccee
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANLG------------------QAPARQAALGAGIPNSVVCT 93 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~~~------------------~~~a~~i~~~lGl~~~~~~~ 93 (404)
+..+|+.+++++||++||+++++||. +++|+..+++.. ...+.+++..+|+ ++|++
T Consensus 94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 171 (915)
T 2qo3_A 94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSI 171 (915)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEE
Confidence 45679999999999999999999995 899987665421 1357899999999 46999
Q ss_pred eEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHH
Q 015576 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (404)
Q Consensus 94 ~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (404)
+|+++|+|++.||+.|+++|++|++|++||+|+|.++. |.....
T Consensus 172 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~-p~~~~~----------------------------------- 215 (915)
T 2qo3_A 172 SVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMAT-PGVFVD----------------------------------- 215 (915)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSS-THHHHH-----------------------------------
T ss_pred EECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcC-HHHHHH-----------------------------------
Confidence 99999999999999999999999999999999999876 321110
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCcc
Q 015576 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253 (404)
Q Consensus 174 ~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~ 253 (404)
+ ...+.+. ++..++| ||.+ .+|++
T Consensus 216 ---------------~-----------~~~~~ls--------~~g~~~~---Fd~~-------------------adG~v 239 (915)
T 2qo3_A 216 ---------------F-----------SRQRALA--------ADGRSKA---FGAG-------------------ADGFG 239 (915)
T ss_dssp ---------------H-----------HTTTCBC--------SSCCCCT---TBTT-------------------CCCBC
T ss_pred ---------------H-----------hhhcccC--------CCCCccc---ccCC-------------------CCcee
Confidence 0 0000010 2445566 6665 67787
Q ss_pred ccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc-----cccchHHHHHHHHHHcCCCCCCcceEeec
Q 015576 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (404)
Q Consensus 254 ~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~dId~~~~h 328 (404)
+|||++++||++.+.|++.+.+++++|.|++..++.... ...+..++++++|+++|++++|||+||+|
T Consensus 240 -------~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~H 312 (915)
T 2qo3_A 240 -------FSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAH 312 (915)
T ss_dssp -------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECC
T ss_pred -------ecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEec
Confidence 799999999999999999999999999999998875432 12345789999999999999999999999
Q ss_pred ccchHH-----HHHHHHHhCCC---CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-------------------
Q 015576 329 EAFSVV-----AIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------------- 381 (404)
Q Consensus 329 d~~~~~-----~~~~~e~lg~~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~------------------- 381 (404)
+.++.. ...+.+.+|.. ..++|++++|.++||+.+|+|+..+++++++|+++.
T Consensus 313 gtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~ 392 (915)
T 2qo3_A 313 GTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSG 392 (915)
T ss_dssp CCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSS
T ss_pred CCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccC
Confidence 887754 23445667754 247999999999999999999999999999999741
Q ss_pred ----------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ----------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ----------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+++.++.||.+..+|||.
T Consensus 393 ~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~ 430 (915)
T 2qo3_A 393 GVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEE 430 (915)
T ss_dssp SEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEE
T ss_pred ceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEee
Confidence 1466788899999999999985
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-29 Score=270.52 Aligned_cols=266 Identities=25% Similarity=0.297 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCCCC-------------------CcHHHHHHHHCCCCCCccee
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANLG-------------------QAPARQAALGAGIPNSVVCT 93 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~~~-------------------~~~a~~i~~~lGl~~~~~~~ 93 (404)
..+|+.+++++||++||++++++|. +++|+..+++.. ...+.+++..+|+ ++|++
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 193 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAM 193 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeE
Confidence 3569999999999999999999985 889988665421 1357789999999 46999
Q ss_pred eEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHH
Q 015576 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (404)
Q Consensus 94 ~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (404)
+|+++|+|++.||+.|+++|++|++|++||+|+|.++. |......
T Consensus 194 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~-p~~~~~~---------------------------------- 238 (917)
T 2hg4_A 194 TVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSS-PGAFTEF---------------------------------- 238 (917)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-THHHHHH----------------------------------
T ss_pred eecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccC-hhhhHhh----------------------------------
Confidence 99999999999999999999999999999999999887 3211000
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCcc
Q 015576 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253 (404)
Q Consensus 174 ~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~ 253 (404)
...+.+. ++..++| |+.+ .+|++
T Consensus 239 ---------------------------~~~~~ls--------~~g~~~p---Fd~~-------------------adG~~ 261 (917)
T 2hg4_A 239 ---------------------------RSQGGLA--------ADGRCKP---FSKA-------------------ADGFG 261 (917)
T ss_dssp ---------------------------TTSSCBC--------TTSCCCT---TBTT-------------------CCCBC
T ss_pred ---------------------------hhccCcC--------CccccCc---cccc-------------------ccCCC
Confidence 0000000 2345566 5554 66777
Q ss_pred ccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc-----ccchHHHHHHHHHHcCCCCCCcceEeec
Q 015576 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTAPSLAIPKAIANAGLEASQIDYYEIN 328 (404)
Q Consensus 254 ~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~agl~~~dId~~~~h 328 (404)
++||++++||++.+.|++.+.+++++|.|++..++..... ..+...+++++|+++|++++|||++|+|
T Consensus 262 -------~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaH 334 (917)
T 2hg4_A 262 -------LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAH 334 (917)
T ss_dssp -------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred -------CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeec
Confidence 7999999999999999999999999999999998765432 2244689999999999999999999999
Q ss_pred ccchHH-----HHHHHHHhCCC---CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-------------------
Q 015576 329 EAFSVV-----AIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------------- 381 (404)
Q Consensus 329 d~~~~~-----~~~~~e~lg~~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~------------------- 381 (404)
+.++.. ...+.+.+|.. ..+++++++|.++||+.+|+|+..+++++++|+++.
T Consensus 335 gtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~ 414 (917)
T 2hg4_A 335 GTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLG 414 (917)
T ss_dssp CCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---
T ss_pred cCCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccc
Confidence 999963 22233445542 247899999999999999999999999999999751
Q ss_pred ----------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ----------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ----------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+++.++.||.+..+|||.
T Consensus 415 ~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~ 452 (917)
T 2hg4_A 415 AVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEE 452 (917)
T ss_dssp CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEE
T ss_pred ceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEecc
Confidence 1466788899999999999985
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=239.76 Aligned_cols=240 Identities=19% Similarity=0.144 Sum_probs=193.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~ 114 (404)
++..+|+.+|+++||+++|+++++||.+++++..+....+..+.+++..+|++. .|+++++++|+|++.||..|+.+|+
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~~C~s~~~al~~A~~~i~ 126 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKG-VYAFDISAACSGFIYALDIADSFIK 126 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-ceEEecCccchHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999877666778999999999973 6999999999999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
+|.++++||+|+|.++... .
T Consensus 127 ~g~~~~vlv~g~e~~s~~~--~---------------------------------------------------------- 146 (309)
T 2ebd_A 127 SGKAKNVLVIGAEKLSEAV--D---------------------------------------------------------- 146 (309)
T ss_dssp TTSCSEEEEEEEEEGGGTC--C----------------------------------------------------------
T ss_pred CCCCCEEEEEEeccccccc--C----------------------------------------------------------
Confidence 9999999999999887410 0
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
| .++ .++++ ++|||+|+||++.+
T Consensus 147 -----------------~-------------~~~--------------------~~~~~-------~gdGaaA~vL~~~~ 169 (309)
T 2ebd_A 147 -----------------W-------------EDR--------------------STCVL-------FGDGAGAVVVTRSE 169 (309)
T ss_dssp -----------------T-------------TCT--------------------TTTTT-------BCEEEEEEEEEECS
T ss_pred -----------------c-------------cch--------------------hhccc-------cccccEEEEEEecC
Confidence 0 000 22333 89999999998764
Q ss_pred HHHHcCCCceEEEEeeEEeccC--------C-----Ccccc--------chHHHHHHHHHHcCCCCCCcceEeecccchH
Q 015576 275 KALELGLQVIAKIRGFADAAQA--------P-----EWFTT--------APSLAIPKAIANAGLEASQIDYYEINEAFSV 333 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~--------~-----~~~~~--------~~~~a~~~al~~agl~~~dId~~~~hd~~~~ 333 (404)
.+ .. |.+....++. | ..... ...++++++|+++|++++|||++++|+.++.
T Consensus 170 ~~----~~----i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~ 241 (309)
T 2ebd_A 170 DK----SD----ILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVR 241 (309)
T ss_dssp SS----CE----EEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH
T ss_pred CC----Cc----eeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence 32 11 2222222111 1 00111 3467999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 334 VAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 334 ~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
....+.+.||++++++..+ +..+||+.+++++..+.+++++-+.+++++.+...++.|....++|||
T Consensus 242 ~~~~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~~g~~~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 242 IINALAEKLNIPKEKVFVN--IQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp HHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHhCCCHHHhhhh--HhhhcchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEE
Confidence 8888999999988776533 778999999999999999988755567888888888888888888887
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-29 Score=239.84 Aligned_cols=253 Identities=22% Similarity=0.200 Sum_probs=200.3
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCc
Q 015576 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (404)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas 101 (404)
+|++.+++...++++..+|+.+|+++||+++|+++++||.+++++..+++..+..+.+++..+|++.++++++++.+|+|
T Consensus 50 rtgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~s 129 (333)
T 4dfe_A 50 RTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSG 129 (333)
T ss_dssp HHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGGH
T ss_pred hcCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccHH
Confidence 35565555556789999999999999999999999999999999998877778889999999999667899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCC
Q 015576 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (404)
Q Consensus 102 ~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~ 181 (404)
++.||..|+.+|++|.++++||+|+|.++..
T Consensus 130 ~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~------------------------------------------------- 160 (333)
T 4dfe_A 130 FAYAVATADSFIRSGQHRTALVIGAETFSRI------------------------------------------------- 160 (333)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-------------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeeccccc-------------------------------------------------
Confidence 9999999999999999999999999998861
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcc
Q 015576 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (404)
Q Consensus 182 ~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (404)
++.++ + .++..+
T Consensus 161 --------------------------------------------~~~~d------------------~------~~~~lf 172 (333)
T 4dfe_A 161 --------------------------------------------LDFKD------------------R------TTCVLF 172 (333)
T ss_dssp --------------------------------------------CCTTC------------------T------TTTTTB
T ss_pred --------------------------------------------cCccc------------------c------cceeee
Confidence 00000 1 123348
Q ss_pred ccccceeeecCHHHHHHcCCCceEEEEeeEEeccC--------C-----------Ccc-----------ccchHHHHHHH
Q 015576 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------P-----------EWF-----------TTAPSLAIPKA 311 (404)
Q Consensus 262 ~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~--------~-----------~~~-----------~~~~~~a~~~a 311 (404)
||||+|+||++.+. .. +.++...++. + ... .....++++++
T Consensus 173 GDGA~A~vl~~~~~-----~~----i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 243 (333)
T 4dfe_A 173 GDGAGAVILQASDE-----PG----VLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEA 243 (333)
T ss_dssp CEEEEEEEEEEESS-----CS----EEEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccEEEEEEEcCC-----CC----eEEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHH
Confidence 99999999987541 11 1111111110 0 000 01235789999
Q ss_pred HHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeec
Q 015576 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (404)
Q Consensus 312 l~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~ 391 (404)
|+++|++++|||+|.+|+.+..+...+.+.||++++++..+ ...+||+.+++-...|.+++++-+-++|++.+...++
T Consensus 244 l~~~gl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G 321 (333)
T 4dfe_A 244 LEKANLSAEQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--VGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVG 321 (333)
T ss_dssp HHHTTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEE
T ss_pred HHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HHhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEc
Confidence 99999999999999999999999999999999999887664 5678999999988888777766555677888888888
Q ss_pred cccceeeeEEE
Q 015576 392 GGGGASALVLE 402 (404)
Q Consensus 392 ~gG~~~a~ll~ 402 (404)
.|-.+.++|||
T Consensus 322 ~G~t~~~~ll~ 332 (333)
T 4dfe_A 322 GGFTWGASVIR 332 (333)
T ss_dssp TTTEEEEEEEE
T ss_pred hhheeEEEEEE
Confidence 87788888887
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=240.93 Aligned_cols=249 Identities=21% Similarity=0.152 Sum_probs=193.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHH
Q 015576 30 GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA 109 (404)
Q Consensus 30 ~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A 109 (404)
...++++..+|+.+|+++||+++|+++++||.+++++..+++..+..+.+++..+|++ ++|+++++++|+|++.||..|
T Consensus 54 ~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A 132 (335)
T 1u6e_A 54 FAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAA 132 (335)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHH
Confidence 3455789999999999999999999999999999999888776778899999999996 589999999999999999999
Q ss_pred HHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHH
Q 015576 110 AQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSY 189 (404)
Q Consensus 110 ~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~ 189 (404)
+.+|++|.++++||+|+|.++... .
T Consensus 133 ~~~i~~g~~~~vLv~g~e~~s~~~--~----------------------------------------------------- 157 (335)
T 1u6e_A 133 ADMIRGGGAATMLVVGTEKLSPTI--D----------------------------------------------------- 157 (335)
T ss_dssp HHHHHHTSCSSEEEEEEEECGGGC--C-----------------------------------------------------
T ss_pred HHHHHcCCCCEEEEEEEccccccc--C-----------------------------------------------------
Confidence 999999999999999999987410 0
Q ss_pred HHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceee
Q 015576 190 AIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALV 269 (404)
Q Consensus 190 ~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~v 269 (404)
| +++ . ++..++|||+|+|
T Consensus 158 ----------------------~-------------~d~--------------------~-------~~~~~gDGA~A~v 175 (335)
T 1u6e_A 158 ----------------------M-------------YDR--------------------G-------NCFIFADGAAAVV 175 (335)
T ss_dssp ----------------------T-------------TCT--------------------T-------TTTTBCEEEEEEE
T ss_pred ----------------------c-------------ccc--------------------c-------cceEeccccEEEE
Confidence 0 000 1 2334899999999
Q ss_pred ecCHHHHHHcCCCceEEEEe-eEEecc-------------CCC----cc-----------ccchHHHHHHHHHHcCCCCC
Q 015576 270 LVSGVKALELGLQVIAKIRG-FADAAQ-------------APE----WF-----------TTAPSLAIPKAIANAGLEAS 320 (404)
Q Consensus 270 L~~~~~a~~~~~~~~~~i~g-~~~~~~-------------~~~----~~-----------~~~~~~a~~~al~~agl~~~ 320 (404)
|++.+. .+ ++..+.+ .+...+ .+. .. .....++++++|+++|++++
T Consensus 176 l~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~ 250 (335)
T 1u6e_A 176 VGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPD 250 (335)
T ss_dssp EEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred EEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 986542 11 1122222 111100 000 00 01335789999999999999
Q ss_pred CcceEeecccchHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeee
Q 015576 321 QIDYYEINEAFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399 (404)
Q Consensus 321 dId~~~~hd~~~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ 399 (404)
|||++++|++++.....+.+.||++++ ++..+ +..+||+.+++....+.++..+-+.+++++.+...+++|+.+.++
T Consensus 251 dId~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~g~~~l~~~~G~G~t~~~~ 328 (335)
T 1u6e_A 251 QIDVFVPHQANSRINELLVKNLQLRPDAVVAND--IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQ 328 (335)
T ss_dssp GCCEEEECCSCHHHHHHHHHHHTCCTTCEECCT--HHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEE
T ss_pred HCCEEEECCCCHHHHHHHHHHcCCCchhhhhhh--hhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEE
Confidence 999999999999999999999999987 55444 567899999998776666666544456788998888888889999
Q ss_pred EEEe
Q 015576 400 VLEL 403 (404)
Q Consensus 400 ll~~ 403 (404)
||+.
T Consensus 329 vl~~ 332 (335)
T 1u6e_A 329 VVRM 332 (335)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9873
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=241.32 Aligned_cols=256 Identities=20% Similarity=0.125 Sum_probs=199.5
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
+.+.+++-..++++..+|+.+|+++||+++|+++++||.+++++..+....+..+.+++..+|+ ++|+++++++|+|+
T Consensus 36 ~Gi~~r~~~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCas~ 113 (322)
T 1ub7_A 36 TGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCPGW 113 (322)
T ss_dssp TCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHH
T ss_pred cCceEEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeCccchHH
Confidence 4444443334578999999999999999999999999999999988766556789999999999 58999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~ 182 (404)
+.||..|+.+|++|.++++||+|+|.++... .
T Consensus 114 ~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~--~---------------------------------------------- 145 (322)
T 1ub7_A 114 IYALAQAHALVEAGLAQKVLAVGAEALSKII--D---------------------------------------------- 145 (322)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECGGGTS--C----------------------------------------------
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEechhcccc--C----------------------------------------------
Confidence 9999999999999999999999999876410 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccc
Q 015576 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (404)
Q Consensus 183 ~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (404)
| +|+ .++++ +|
T Consensus 146 -----------------------------~-------------~d~--------------------~~~~~-------~G 156 (322)
T 1ub7_A 146 -----------------------------W-------------NDR--------------------ATAVL-------FG 156 (322)
T ss_dssp -----------------------------T-------------TCH--------------------HHHTT-------BC
T ss_pred -----------------------------h-------------hhc--------------------cccee-------ec
Confidence 0 000 11233 79
Q ss_pred cccceeeecCHHHHHHcCCCceEEE-EeeEEeccC----------CCc---------cc--------cchHHHHHHHHHH
Q 015576 263 DGAAALVLVSGVKALELGLQVIAKI-RGFADAAQA----------PEW---------FT--------TAPSLAIPKAIAN 314 (404)
Q Consensus 263 DGAaA~vL~~~~~a~~~~~~~~~~i-~g~~~~~~~----------~~~---------~~--------~~~~~a~~~al~~ 314 (404)
|||+|+||++.+. +.+++... .+.+...+. |.. .. ....++++++|++
T Consensus 157 dGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ 232 (322)
T 1ub7_A 157 DGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEK 232 (322)
T ss_dssp CEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987642 12232222 221111110 111 00 2346789999999
Q ss_pred cCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeecccc
Q 015576 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGG 394 (404)
Q Consensus 315 agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG 394 (404)
+|++++|||++++|+.++.....+.+.||++.+++.. .+..+||+.++++...+.+++++-+.+++++.+...++.|+
T Consensus 233 agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~--~~~~~Gh~~~As~~~~l~~~l~~g~~~~g~~~l~~~~G~G~ 310 (322)
T 1ub7_A 233 AGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAV--NVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGL 310 (322)
T ss_dssp HTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTT
T ss_pred cCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHH--HHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEChhh
Confidence 9999999999999999999888899999998877653 37789999999999998888777555678899999999999
Q ss_pred ceeeeEEEe
Q 015576 395 GASALVLEL 403 (404)
Q Consensus 395 ~~~a~ll~~ 403 (404)
.+.++|||.
T Consensus 311 ~~~~~vl~~ 319 (322)
T 1ub7_A 311 TWAAAVLTW 319 (322)
T ss_dssp EEEEEEEEC
T ss_pred eeEEEEEEe
Confidence 999999974
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.8e-28 Score=230.45 Aligned_cols=252 Identities=16% Similarity=0.148 Sum_probs=200.6
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCc
Q 015576 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (404)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas 101 (404)
+|++.+++-..++++..+|+.+|+++||+++|+++++||.+++++.++++..+..+.+++..+|++ ++++++++.+|+|
T Consensus 43 ~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s 121 (323)
T 3il3_A 43 RSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISFDLAAACTG 121 (323)
T ss_dssp HTCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEEEECCGGGH
T ss_pred hcCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEEEECCccHH
Confidence 566766655667899999999999999999999999999999999988776778899999999997 6899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCC
Q 015576 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (404)
Q Consensus 102 ~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~ 181 (404)
++.||..|+.+|++|.++++||+++|.+|...
T Consensus 122 ~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~------------------------------------------------ 153 (323)
T 3il3_A 122 FVYALSVADQFIRAGKVKKALVIGSDLNSRKL------------------------------------------------ 153 (323)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSC------------------------------------------------
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEeecccccc------------------------------------------------
Confidence 99999999999999999999999999998611
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcc
Q 015576 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (404)
Q Consensus 182 ~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (404)
+.+. + ..+..+
T Consensus 154 ---------------------------------------------~~~d------------------~------~~~~lf 164 (323)
T 3il3_A 154 ---------------------------------------------DETD------------------R------STVVLF 164 (323)
T ss_dssp ---------------------------------------------CTTC------------------T------TTTTTB
T ss_pred ---------------------------------------------Cccc------------------c------cccccc
Confidence 0000 1 023348
Q ss_pred ccccceeeecCHHHHHHcCCCceEEEEeeEEeccC--------CC---------ccc-----------cchHHHHHHHHH
Q 015576 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------PE---------WFT-----------TAPSLAIPKAIA 313 (404)
Q Consensus 262 ~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~--------~~---------~~~-----------~~~~~a~~~al~ 313 (404)
||||+|+||+..+ ... +.+....++. |. .+. ....++++++|+
T Consensus 165 GDGA~A~vl~~~~-----~~~----i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~ 235 (323)
T 3il3_A 165 GDGAGAVILEASE-----QEG----IISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLL 235 (323)
T ss_dssp CEEEEEEEEEEES-----SCC----EEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEEEcC-----CCC----eEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998754 111 1222111110 00 000 012467899999
Q ss_pred HcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccc
Q 015576 314 NAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG 393 (404)
Q Consensus 314 ~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~g 393 (404)
++|++++|||++.+|+.+..+...+.+.||++++++..+ ...+||+.+++-...|.+++++-+-++|++.+...++.|
T Consensus 236 ~~gl~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G 313 (323)
T 3il3_A 236 ANNLDKKDLDWLVPHQANLRIITATAKKLEMDMSQVVVT--LDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGG 313 (323)
T ss_dssp TTTCCTTTCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTSSCTTCEEEEEEEETT
T ss_pred HcCCCHHHCCEEEEcCCCHHHHHHHHHHcCcCHHHhhcc--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehh
Confidence 999999999999999999999999999999999887654 566899999998888888777655567888888888887
Q ss_pred cceeeeEEE
Q 015576 394 GGASALVLE 402 (404)
Q Consensus 394 G~~~a~ll~ 402 (404)
-.+.++|||
T Consensus 314 ~t~~~~~l~ 322 (323)
T 3il3_A 314 WTWGSALVR 322 (323)
T ss_dssp TEEEEEEEE
T ss_pred heeEEEEEE
Confidence 788888887
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=235.62 Aligned_cols=254 Identities=17% Similarity=0.135 Sum_probs=198.8
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHH
Q 015576 24 PMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103 (404)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~ 103 (404)
.+.+++-..++++..+|+.+|+++||+++|+++++||.+++|+..+....+..+.+++..+|++ .+|+++++++|+|++
T Consensus 38 Gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~ 116 (317)
T 1hnj_A 38 GIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGFT 116 (317)
T ss_dssp CCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGGHHH
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCeEEeeCcccHHHH
Confidence 3333333345789999999999999999999999999999999888766677899999999997 489999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCH
Q 015576 104 KAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183 (404)
Q Consensus 104 ~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~ 183 (404)
.||..|+++|++|.++++||+|+|.++... .
T Consensus 117 ~al~~A~~~i~~g~~~~vlv~g~e~~s~~~--~----------------------------------------------- 147 (317)
T 1hnj_A 117 YALSVADQYVKSGAVKYALVVGSDVLARTC--D----------------------------------------------- 147 (317)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEECHHHHS--C-----------------------------------------------
T ss_pred HHHHHHHHHHHCCCCCEEEEEEechhcccC--C-----------------------------------------------
Confidence 999999999999999999999999876400 0
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcccc
Q 015576 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISD 263 (404)
Q Consensus 184 ~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~D 263 (404)
| .++ .+|++ +||
T Consensus 148 ----------------------------~-------------~d~--------------------~~~~~-------~Gd 159 (317)
T 1hnj_A 148 ----------------------------P-------------TDR--------------------GTIII-------FGD 159 (317)
T ss_dssp ----------------------------T-------------TCH--------------------HHHTT-------BCC
T ss_pred ----------------------------c-------------hhc--------------------cccee-------ecc
Confidence 0 000 11233 799
Q ss_pred ccceeeecCHHHHHHcCCCceEEEEe-eEEecc---CCC-------------cccc--------chHHHHHHHHHHcCCC
Q 015576 264 GAAALVLVSGVKALELGLQVIAKIRG-FADAAQ---APE-------------WFTT--------APSLAIPKAIANAGLE 318 (404)
Q Consensus 264 GAaA~vL~~~~~a~~~~~~~~~~i~g-~~~~~~---~~~-------------~~~~--------~~~~a~~~al~~agl~ 318 (404)
||+|+||++.+. .++++.+.+ .+...+ .+. .... ...++++++|+++|++
T Consensus 160 GA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~ 234 (317)
T 1hnj_A 160 GAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLD 234 (317)
T ss_dssp EEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999986542 234444433 221111 111 0011 3467899999999999
Q ss_pred CCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceee
Q 015576 319 ASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASA 398 (404)
Q Consensus 319 ~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a 398 (404)
++|||+|++|+.++.....+.+.||++++++. ..+..+||+.++++...|.+++++-+.++|++.+...++.|..+.+
T Consensus 235 ~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~--~~~~~~Gn~~~As~~~~L~~~~~~~~~~~G~~vll~~~G~G~t~~~ 312 (317)
T 1hnj_A 235 RSQLDWLVPHQANLRIISATAKKLGMSMDNVV--VTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGS 312 (317)
T ss_dssp GGGCCEEEECCSCHHHHHHHHHHTTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEE
T ss_pred HHHCCEEEEcCCCHHHHHHHHHHcCCCHHHhH--hhHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhheeEE
Confidence 99999999999999999999999999887764 3477899999999999988887765556788888888888888888
Q ss_pred eEEE
Q 015576 399 LVLE 402 (404)
Q Consensus 399 ~ll~ 402 (404)
+|||
T Consensus 313 ~~l~ 316 (317)
T 1hnj_A 313 ALVR 316 (317)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8887
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=258.84 Aligned_cols=262 Identities=20% Similarity=0.202 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC-------------------CCCcHHHHHHHHCCCCCCccee
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-------------------LGQAPARQAALGAGIPNSVVCT 93 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~-------------------~~~~~a~~i~~~lGl~~~~~~~ 93 (404)
..+|+.+++++||++||++++++| ++++|+..+++ .....+.+++..+|+ ++|++
T Consensus 80 ~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~ 157 (965)
T 3hhd_A 80 QLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSI 157 (965)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCee
Confidence 345999999999999999999999 78888765442 123468899999999 47999
Q ss_pred eEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHH
Q 015576 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (404)
Q Consensus 94 ~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (404)
+|+++|+|++.||+.|+++|++|++|++||+|+|.++. |..... +.
T Consensus 158 tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~-p~~~~~-----------------------------~~---- 203 (965)
T 3hhd_A 158 ALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLK-PNTSVQ-----------------------------FL---- 203 (965)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCC-HHHHHH-----------------------------HH----
T ss_pred eecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH-----------------------------HH----
Confidence 99999999999999999999999999999999999887 321110 00
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCcc
Q 015576 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253 (404)
Q Consensus 174 ~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~ 253 (404)
+ .+.+ -++..++| ||.+ .+|++
T Consensus 204 ----~------------------------~~~l--------s~~g~~~~---Fd~~-------------------adG~~ 225 (965)
T 3hhd_A 204 ----R------------------------LGML--------SPEGTCKA---FDTA-------------------GNGYC 225 (965)
T ss_dssp ----H------------------------HTCB--------CTTCCCCT---TBTT-------------------CCSBC
T ss_pred ----h------------------------ccCc--------CCCCcccc---chhc-------------------cCCcc
Confidence 0 0000 02456666 7766 78888
Q ss_pred ccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc------ccchHHHHHHHHHHcCCCCCCcceEee
Q 015576 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF------TTAPSLAIPKAIANAGLEASQIDYYEI 327 (404)
Q Consensus 254 ~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~------~~~~~~a~~~al~~agl~~~dId~~~~ 327 (404)
++||++++||++.+.|+ ++++.|.|++.++++.... ..+..++++++|+++|++++||||||.
T Consensus 226 -------~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEa 294 (965)
T 3hhd_A 226 -------RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEA 294 (965)
T ss_dssp -------BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred -------ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccc
Confidence 69999999999987764 5789999999998764311 224578999999999999999999999
Q ss_pred cccchHH----H-HHHHHHhCCC-CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC--------------------
Q 015576 328 NEAFSVV----A-IANQKLLGLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------------- 381 (404)
Q Consensus 328 hd~~~~~----~-~~~~e~lg~~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~-------------------- 381 (404)
|..++.. + ..+.+.++-. ..|+.+++.|..+||+.+|+|+..+++++++|+++-
T Consensus 295 HgTgT~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~ 374 (965)
T 3hhd_A 295 HGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDG 374 (965)
T ss_dssp CCCCCTTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHT
T ss_pred cCCCCCCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccC
Confidence 9999843 2 2333455532 346888899999999999999999999999999851
Q ss_pred ------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++..++.++.||.+..+|||.
T Consensus 375 ~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~ 408 (965)
T 3hhd_A 375 RLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRP 408 (965)
T ss_dssp SEEECCSCEECCSCEEEEEEECTTSEEEEEEEEE
T ss_pred ceeecCCCccCCCCeEEEecccCCCceEEEEecc
Confidence 1234678899999999999984
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=235.37 Aligned_cols=247 Identities=17% Similarity=0.083 Sum_probs=195.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHH
Q 015576 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (404)
Q Consensus 32 ~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~ 111 (404)
.++++..+|+.+|+++||+++|+++++||.+++|+..+++..+..+.+++..+|++ .+|+++++++|+|++.||..|+.
T Consensus 55 ~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~ 133 (339)
T 1mzj_A 55 EPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAAD 133 (339)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHH
Confidence 35789999999999999999999999999999999988776677899999999997 48999999999999999999999
Q ss_pred HHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHH
Q 015576 112 SIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAI 191 (404)
Q Consensus 112 ~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~ 191 (404)
+|++|.++++||+|+|.++.. ..
T Consensus 134 ~i~~G~~~~vLv~g~e~~s~~--~~------------------------------------------------------- 156 (339)
T 1mzj_A 134 AVESGGSRHVLVVATERMTDV--ID------------------------------------------------------- 156 (339)
T ss_dssp HHHHSSCSCEEEEEEEEGGGG--SC-------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEEcccccc--cC-------------------------------------------------------
Confidence 999999999999999987641 00
Q ss_pred HHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeec
Q 015576 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLV 271 (404)
Q Consensus 192 ~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~ 271 (404)
+ .++ .++++ +||||+|+||+
T Consensus 157 --------------------~-------------~d~--------------------~~~~~-------~GdGA~A~vL~ 176 (339)
T 1mzj_A 157 --------------------L-------------ADR--------------------SLSFL-------FGDGAGAAVVG 176 (339)
T ss_dssp --------------------S-------------SCT--------------------TTTTT-------BCEEEEEEEEE
T ss_pred --------------------c-------------ccc--------------------ccceE-------eccCceEEEEE
Confidence 0 000 23344 89999999998
Q ss_pred CHHHHHHcCCCceEE-EEeeEEeccC-------CCc-------------cc--------cchHHHHHHHHHHcCCCCCCc
Q 015576 272 SGVKALELGLQVIAK-IRGFADAAQA-------PEW-------------FT--------TAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 272 ~~~~a~~~~~~~~~~-i~g~~~~~~~-------~~~-------------~~--------~~~~~a~~~al~~agl~~~dI 322 (404)
+.+. .+++.. +.+.+...+. |.. .. ....++++++|+++|++++||
T Consensus 177 ~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~di 251 (339)
T 1mzj_A 177 PSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDL 251 (339)
T ss_dssp EESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGC
T ss_pred ecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 6542 122221 2222211110 100 00 234678999999999999999
Q ss_pred ceEeecccchHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEE
Q 015576 323 DYYEINEAFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll 401 (404)
|+|+.|+.++.....+.+.||++.+ ++..+ +..+||+.++++...|.+++++-+.++|++.+...++.|..+.++||
T Consensus 252 d~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~--~~~~Gn~~sAs~~~~L~~~~~~g~~~~G~~vll~~~G~G~t~~~~~l 329 (339)
T 1mzj_A 252 VAFVPHQANLRIIDVLVDRLGVPEHVVVSRD--AEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQAL 329 (339)
T ss_dssp SEEEECCSCHHHHHHHHHHHTCCTTSEECCT--HHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhCCCccceeeeh--hhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEE
Confidence 9999999999998899999999887 66533 56799999999999988888776666788999888988889999998
Q ss_pred Ee
Q 015576 402 EL 403 (404)
Q Consensus 402 ~~ 403 (404)
+.
T Consensus 330 ~~ 331 (339)
T 1mzj_A 330 LL 331 (339)
T ss_dssp EC
T ss_pred Ee
Confidence 74
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=229.27 Aligned_cols=256 Identities=17% Similarity=0.068 Sum_probs=200.1
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHH
Q 015576 24 PMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103 (404)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~ 103 (404)
++.+++-..++++..+|+.+|+++||+++|+++++||.+++++.++++..+..+.+++..+|++.++++++++.+|+|++
T Consensus 53 GI~~R~~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~ 132 (354)
T 4efi_A 53 GVNRRRWADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGYP 132 (354)
T ss_dssp CCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHHH
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHHH
Confidence 34344444567899999999999999999999999999999999887777889999999999965799999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCH
Q 015576 104 KAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183 (404)
Q Consensus 104 ~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~ 183 (404)
.||..|+.+|++|.+++|||+++|.+|...
T Consensus 133 ~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-------------------------------------------------- 162 (354)
T 4efi_A 133 QALWLGMNLIQTGAAKRVLLAVGDTISKMI-------------------------------------------------- 162 (354)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEECGGGGC--------------------------------------------------
T ss_pred HHHHHHHHHHHCCCCCEEEEEEechhcccC--------------------------------------------------
Confidence 999999999999999999999999987610
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcccc
Q 015576 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISD 263 (404)
Q Consensus 184 ~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~D 263 (404)
+++ .. ..+..+||
T Consensus 163 -------------------------------------------~~~---------------------d~---~~~~lfGD 175 (354)
T 4efi_A 163 -------------------------------------------DPT---------------------DR---STSLLFGD 175 (354)
T ss_dssp -------------------------------------------CTT---------------------CH---HHHTTBCC
T ss_pred -------------------------------------------Ccc---------------------cc---cccccccc
Confidence 000 00 01223899
Q ss_pred ccceeeecCHHHHHHcCCCce-EEEEeeEEecc-------C--CC--------------ccc-----------cchHHHH
Q 015576 264 GAAALVLVSGVKALELGLQVI-AKIRGFADAAQ-------A--PE--------------WFT-----------TAPSLAI 308 (404)
Q Consensus 264 GAaA~vL~~~~~a~~~~~~~~-~~i~g~~~~~~-------~--~~--------------~~~-----------~~~~~a~ 308 (404)
||+|+||+..+.. ..+ ..+...+...+ . |. .+. ....+++
T Consensus 176 GA~A~vl~~~~~~-----~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i 250 (354)
T 4efi_A 176 AGTMTALETSNGD-----AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLV 250 (354)
T ss_dssp EEEEEEEEECCSC-----CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEeecCCC-----CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHH
Confidence 9999999865311 111 11111110000 0 10 000 1124578
Q ss_pred HHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEe
Q 015576 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (404)
Q Consensus 309 ~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~ 388 (404)
+++|+++|++++|||+|.+|+.+..+...+.+.||++++++..+ ...+||+.+++-...|.+++++-+.++|++.+..
T Consensus 251 ~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~ 328 (354)
T 4efi_A 251 SRTLDIAGRDKDSYDAFLFHQANLFMLKHLAKKAGLPAERVPVN--IGEYGNTSCASIPLLITTELKDRLKEETLQLGMF 328 (354)
T ss_dssp HHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHTTCCGGGSCCC--HHHHCBCGGGHHHHHHHHHSHHHHHHSCEEEEEE
T ss_pred HHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHhCcCHHHHHHH--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999887654 5778999999998899888887777788888888
Q ss_pred eeccccceeeeEEEe
Q 015576 389 ICNGGGGASALVLEL 403 (404)
Q Consensus 389 ~~~~gG~~~a~ll~~ 403 (404)
.++.|-.+.++|||.
T Consensus 329 ~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 329 GFGVGYSWASAALAV 343 (354)
T ss_dssp EEETTTEEEEEEEEE
T ss_pred EEchhhhheeeEEEE
Confidence 888888889999884
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-28 Score=233.68 Aligned_cols=263 Identities=17% Similarity=0.111 Sum_probs=199.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHH
Q 015576 31 SLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAA 110 (404)
Q Consensus 31 ~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~ 110 (404)
..++++..+|+.+|+++||+++|+++++||.+++++.++++..+..+.+++..+|+++++++++++.+|+|++.||..|+
T Consensus 62 ~~~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~ 141 (345)
T 3s21_A 62 WDQDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAA 141 (345)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHH
Confidence 34678999999999999999999999999999999998877777889999999999767899999999999999999999
Q ss_pred HHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHH
Q 015576 111 QSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190 (404)
Q Consensus 111 ~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~ 190 (404)
.+|++|.+++|||+|+|.++.. ......+
T Consensus 142 ~~i~~g~~~~vLvvg~e~~s~~-~~~~~~~-------------------------------------------------- 170 (345)
T 3s21_A 142 RMLERGEIDYALVVDGETANLV-YEKTLER-------------------------------------------------- 170 (345)
T ss_dssp HHHHHTSCSEEEEEEEECCHHH-HHHHHHH--------------------------------------------------
T ss_pred HHHHCCCCCEEEEEEEcccchh-hcccccc--------------------------------------------------
Confidence 9999999999999999998861 1000000
Q ss_pred HHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeee
Q 015576 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVL 270 (404)
Q Consensus 191 ~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL 270 (404)
.. . + ...+++ |+.+ ..+.+ +||||+|+||
T Consensus 171 ----------~~----~----~----~~~~~~---f~~~-------------------~~~~~-------~GdGA~A~vl 199 (345)
T 3s21_A 171 ----------MT----S----P----DVTEEE---FRNE-------------------LAALT-------LGCGAAAMVM 199 (345)
T ss_dssp ----------HT----C----T----TCCHHH---HHHH-------------------HGGGG-------BCCEEEEEEE
T ss_pred ----------cc----C----C----ccchhh---hhhh-------------------cccee-------eccceeEEEE
Confidence 00 0 0 000000 1110 11233 7999999999
Q ss_pred cCHHHHHHcCCCceEEEEeeEEeccCC--C--------c--cc--------cchHHHHHHHHHHcCCCCCCcceEeeccc
Q 015576 271 VSGVKALELGLQVIAKIRGFADAAQAP--E--------W--FT--------TAPSLAIPKAIANAGLEASQIDYYEINEA 330 (404)
Q Consensus 271 ~~~~~a~~~~~~~~~~i~g~~~~~~~~--~--------~--~~--------~~~~~a~~~al~~agl~~~dId~~~~hd~ 330 (404)
.+.+... + . ..|.+.....+.. . . .. ....++++++|+++|++++|||++.+|+.
T Consensus 200 ~~~~~~~--~-~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~ 274 (345)
T 3s21_A 200 ARSELVP--D-A--PRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQV 274 (345)
T ss_dssp EEGGGST--T-S--CEEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCS
T ss_pred ecCCCCC--C-C--cceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC
Confidence 8765311 1 1 2444444433210 0 0 00 01246788999999999999999999999
Q ss_pred chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 331 FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 331 ~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
+..+...+.+.||++++++..+ ...+||+.+++-...|.+++++-+-++|++.+...++.|-.+.+++||
T Consensus 275 ~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 275 SRPHTAAFVKSFGIDPAKVMTI--FGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp CHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred CHHHHHHHHHHcCcCHHHceee--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhhhheEEEEE
Confidence 9999999999999998887543 456899999998888888888755667888888888887788888886
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=231.30 Aligned_cols=250 Identities=15% Similarity=0.078 Sum_probs=194.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHH
Q 015576 31 SLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAA 110 (404)
Q Consensus 31 ~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~ 110 (404)
..++++..+|+.+|+++||+++|+++++||.++++++.++...+..+.+++..+|+++++++++++.+|+|++.||..|+
T Consensus 74 a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~ 153 (365)
T 3gwa_A 74 AAPRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAK 153 (365)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHH
Confidence 45678999999999999999999999999999999998877778889999999999867899999999999999999999
Q ss_pred HHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHH
Q 015576 111 QSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190 (404)
Q Consensus 111 ~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~ 190 (404)
.+|++|.+++|||+++|.+|...
T Consensus 154 ~~i~~g~~~~vLvvg~e~~s~~~--------------------------------------------------------- 176 (365)
T 3gwa_A 154 GLVETGAARCVLLLTADTYSKYL--------------------------------------------------------- 176 (365)
T ss_dssp HHHHTTSCSEEEEEEEECGGGGS---------------------------------------------------------
T ss_pred HHHHcCCCCEEEEEEEchhhccC---------------------------------------------------------
Confidence 99999999999999999998610
Q ss_pred HHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeee
Q 015576 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVL 270 (404)
Q Consensus 191 ~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL 270 (404)
+++ .. ..+..+||||+|+||
T Consensus 177 ------------------------------------~~~---------------------dr---~~~~lfGDGAaA~vl 196 (365)
T 3gwa_A 177 ------------------------------------HPL---------------------DK---SVRTLFGDGASATAV 196 (365)
T ss_dssp ------------------------------------CTT---------------------CH---HHHTTBCCEEEEEEE
T ss_pred ------------------------------------Ccc---------------------cc---cccccccceeEEEEE
Confidence 000 00 012238999999999
Q ss_pred cCHHHHHHcCCCceE-EEEeeEEecc----------CCCc-------------------c-----------ccchHHHHH
Q 015576 271 VSGVKALELGLQVIA-KIRGFADAAQ----------APEW-------------------F-----------TTAPSLAIP 309 (404)
Q Consensus 271 ~~~~~a~~~~~~~~~-~i~g~~~~~~----------~~~~-------------------~-----------~~~~~~a~~ 309 (404)
++.+.. ....+. .+...+...+ .|.. + .....++++
T Consensus 197 ~~~~~~---~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~ 273 (365)
T 3gwa_A 197 IAEHGE---LERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAAD 273 (365)
T ss_dssp EEECSS---SCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHH
T ss_pred EecCCC---CCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHH
Confidence 865321 001111 1111110000 0100 0 011246789
Q ss_pred HHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEee
Q 015576 310 KAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGI 389 (404)
Q Consensus 310 ~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~ 389 (404)
++|+++|++++|||+|.+|+.+..+...+.+.||++++++..+ ...+||+.+++-...|.+++++-+-++|++.+...
T Consensus 274 ~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~--l~~~GNtssAsipl~L~~~~~~g~~~~Gd~vll~~ 351 (365)
T 3gwa_A 274 RLLALAGEPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVL--MEHCGNTVSSTLPLALETMRANGTLARGMRLMLLG 351 (365)
T ss_dssp HHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCC--CTTTCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEE
T ss_pred HHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHH--HhcccchHHHHHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 9999999999999999999999999999999999999887654 45689999999887777777665556788888888
Q ss_pred eccccceeeeEEE
Q 015576 390 CNGGGGASALVLE 402 (404)
Q Consensus 390 ~~~gG~~~a~ll~ 402 (404)
++.|-.+.++|||
T Consensus 352 fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 352 FGVGYSWAGCLVN 364 (365)
T ss_dssp EETTTEEEEEEEE
T ss_pred EehhheeEEEEEE
Confidence 8888888888887
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-27 Score=226.99 Aligned_cols=252 Identities=16% Similarity=0.109 Sum_probs=196.1
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHH
Q 015576 24 PMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103 (404)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~ 103 (404)
++.+++...++++..+|+.+|+++||+++|+++++||.+++++..++...+..+.+++..+|++ ++++++++.+|+|++
T Consensus 61 Gi~~R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~ 139 (359)
T 3h78_A 61 GVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQASGLL 139 (359)
T ss_dssp CCCEEEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEECGGGHHH
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEEEECCHhHHHH
Confidence 3333333455789999999999999999999999999999999988776778899999999997 689999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCH
Q 015576 104 KAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183 (404)
Q Consensus 104 ~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~ 183 (404)
.||..|+.+|++|.+++|||+++|.+|..-
T Consensus 140 ~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~-------------------------------------------------- 169 (359)
T 3h78_A 140 YGLQMARGQILAGLARHVLVVCGEVLSKRM-------------------------------------------------- 169 (359)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEEECGGGC--------------------------------------------------
T ss_pred HHHHHHHHHHHCCCcCEEEEEEEchhcccC--------------------------------------------------
Confidence 999999999999999999999999988610
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcccc
Q 015576 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISD 263 (404)
Q Consensus 184 ~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~D 263 (404)
+.++ . + +..+.++||
T Consensus 170 -------------------------------------------~~~d------------------~-~---~~t~~lfGD 184 (359)
T 3h78_A 170 -------------------------------------------DCSD------------------R-G---RNLSILLGD 184 (359)
T ss_dssp -------------------------------------------CCST------------------T-T---HHHHTTBCE
T ss_pred -------------------------------------------Cccc------------------c-c---ccccceecc
Confidence 0000 0 0 001233899
Q ss_pred ccceeeecCHHHHHHcCCCceEEEEeeEEecc--------CC-----C--------------ccc-----------cchH
Q 015576 264 GAAALVLVSGVKALELGLQVIAKIRGFADAAQ--------AP-----E--------------WFT-----------TAPS 305 (404)
Q Consensus 264 GAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~--------~~-----~--------------~~~-----------~~~~ 305 (404)
||+|+||+..+. ... .|.+....++ .+ . .+. ....
T Consensus 185 GAaA~vl~~~~~---~~~----~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~ 257 (359)
T 3h78_A 185 GAGAVVVSAGES---LED----GLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLV 257 (359)
T ss_dssp EEEEEEEECCSC---SSS----EEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHH
T ss_pred eeEEEEEEecCC---CCC----ceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHH
Confidence 999999987531 011 1222211111 00 0 000 0124
Q ss_pred HHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCcee
Q 015576 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (404)
Q Consensus 306 ~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~g 385 (404)
++++++|+++|++++|||+|.+|+.+..+...+.+.||++++++..+ ...+||+.+++-...|.+++++ .++|++.
T Consensus 258 ~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sAsi~l~L~~~~~~--l~~Gd~v 333 (359)
T 3h78_A 258 RIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVT--VDRLGNMASASTPVTLAMFWPD--IQPGQRV 333 (359)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHGGG--SCTTCEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCcCHHHhhhh--hhcccchHHHHHHHHHHHHHHh--CCCCCEE
Confidence 68899999999999999999999999999999999999999887664 5678999999988888888877 5678888
Q ss_pred EEeeeccccceeeeEEE
Q 015576 386 VGGICNGGGGASALVLE 402 (404)
Q Consensus 386 l~~~~~~gG~~~a~ll~ 402 (404)
+...++.|-.+.++||+
T Consensus 334 ll~~fG~G~t~~~~ll~ 350 (359)
T 3h78_A 334 LVLTYGSGATWGAALYR 350 (359)
T ss_dssp EEEEEETTTEEEEEEEE
T ss_pred EEEEEchhhhheeeeEE
Confidence 88888887788889987
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=228.77 Aligned_cols=241 Identities=19% Similarity=0.179 Sum_probs=190.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~ 114 (404)
++..+|+.+|+++||+++|+ ++||.+++++..+.+..+..+.+++..+|++ ++++++++++|+|++.||..|+.+|+
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~ 127 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLIS 127 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHHH
Confidence 68999999999999999999 8899999999887665566889999999997 48999999999999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
+|.++++||+|+|.++... ..
T Consensus 128 ~g~~~~vLv~g~e~~s~~~--~~--------------------------------------------------------- 148 (331)
T 2x3e_A 128 AGLADSALLVGVDTFSHTL--DP--------------------------------------------------------- 148 (331)
T ss_dssp TTSCSEEEEEEEECGGGGS--CT---------------------------------------------------------
T ss_pred cCCCCEEEEEEeeccccCC--Cc---------------------------------------------------------
Confidence 9999999999999876410 00
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
-|+ .++++ +||||+|+||++.+
T Consensus 149 -------------------------------~d~--------------------~~~~~-------~GdGA~A~vL~~~~ 170 (331)
T 2x3e_A 149 -------------------------------ADR--------------------STRAL-------FGDGAGAVVLRAGD 170 (331)
T ss_dssp -------------------------------TCH--------------------HHHHH-------BCCEEEEEEEEEEC
T ss_pred -------------------------------ccc--------------------cccee-------eccccEEEEEEecC
Confidence 000 11233 79999999998654
Q ss_pred HHHHcCCCceEEEEeeEEeccC--------CC-------------c---cc--------cchHHHHHHHHHHcCCCCCCc
Q 015576 275 KALELGLQVIAKIRGFADAAQA--------PE-------------W---FT--------TAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~--------~~-------------~---~~--------~~~~~a~~~al~~agl~~~dI 322 (404)
.+ .+.+++ +....++. |. . .. ....++++++|+++|++++||
T Consensus 171 ~a--~~~~i~----~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~di 244 (331)
T 2x3e_A 171 AE--EEGALL----AFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDL 244 (331)
T ss_dssp TT--STTBEE----EEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred CC--CCCceE----EEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 32 112222 22221111 00 0 00 234678999999999999999
Q ss_pred ceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEE
Q 015576 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
|+|.+|+.++.....+.+.||++++++..+ +..+||+.+++....+.+++++-+.++|++.+...++.|..+.+++|+
T Consensus 245 d~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~~l~ 322 (331)
T 2x3e_A 245 HHLVPHQANTRILAAVADQLDLPVERVVSN--IAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALR 322 (331)
T ss_dssp SEEEECCCCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred CEEEEcCCCHHHHHHHHHHcCCCHHHHhhh--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEeHHhhheeeEEE
Confidence 999999999999999999999988776543 567999999999998888887766667889998888888889999987
Q ss_pred e
Q 015576 403 L 403 (404)
Q Consensus 403 ~ 403 (404)
.
T Consensus 323 ~ 323 (331)
T 2x3e_A 323 W 323 (331)
T ss_dssp C
T ss_pred E
Confidence 4
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=223.79 Aligned_cols=256 Identities=18% Similarity=0.149 Sum_probs=196.0
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
|++..|+-..++++..+|+.+|+++||+++|+++++||.||++++++++..|..+..++..||++ +.++++++.+|+++
T Consensus 48 tGI~~R~~a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~~~C~g~ 126 (350)
T 4ewp_A 48 TGIVTRQRATAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVSAACAGY 126 (350)
T ss_dssp HCCSEEECCCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEECGGGHH
T ss_pred cCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEeecchhhH
Confidence 44544444567899999999999999999999999999999999999887888999999999997 57899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~ 182 (404)
+.||..|..+|++|.++++||+++|.+|..
T Consensus 127 ~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~-------------------------------------------------- 156 (350)
T 4ewp_A 127 CYGVAQADALVRSGTARHVLVVGVERLSDV-------------------------------------------------- 156 (350)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEEEGGGG--------------------------------------------------
T ss_pred HHHHHHhhhhhhCCCccceeEeeeeeceec--------------------------------------------------
Confidence 999999999999999999999999998751
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccc
Q 015576 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (404)
Q Consensus 183 ~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (404)
+|+.. ++ .+..+|
T Consensus 157 -------------------------------------------~d~~~------------------~~------~~~lfg 169 (350)
T 4ewp_A 157 -------------------------------------------VDPTD------------------RS------ISFLLG 169 (350)
T ss_dssp -------------------------------------------CCTTC------------------TT------TGGGBC
T ss_pred -------------------------------------------ccccc------------------cc------cccccc
Confidence 00000 00 122389
Q ss_pred cccceeeecCHHHHHHcCCCceEEEEee-EEecc----------------------CCC-----------ccc-------
Q 015576 263 DGAAALVLVSGVKALELGLQVIAKIRGF-ADAAQ----------------------APE-----------WFT------- 301 (404)
Q Consensus 263 DGAaA~vL~~~~~a~~~~~~~~~~i~g~-~~~~~----------------------~~~-----------~~~------- 301 (404)
|||+|+||...+. .+... ...+. +.... +.. .+.
T Consensus 170 DGA~A~vl~~~~~---~~~~~--~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 244 (350)
T 4ewp_A 170 DGAGAVIVAASDE---PGISP--SVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVF 244 (350)
T ss_dssp EEEEEEEEEEESS---CCBCC--CEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHH
T ss_pred cchheeeeecccC---CCccc--eeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHH
Confidence 9999999976431 11111 11111 00000 000 000
Q ss_pred ----cchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 302 ----TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 302 ----~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
....++++++|+++|++++|||++.+|+.+..+...+.+.||++++++.+. -...+||+.++|-...|.+++++-
T Consensus 245 ~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~-~l~~~GNtssasi~~~L~~~~~~g 323 (350)
T 4ewp_A 245 RWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVAR-DIADAGNTSAASIPLAMHRLLEEN 323 (350)
T ss_dssp HHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECC-THHHHCBCGGGHHHHHHHHHHHHC
T ss_pred HHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEec-ccccccchHHHHHHHHHHHHHHhC
Confidence 122468999999999999999999999999999999999999998875331 235689999999888888888877
Q ss_pred HhcCCceeEEeeeccccceeeeEEE
Q 015576 378 RHKKGKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 378 ~~~~~~~gl~~~~~~gG~~~a~ll~ 402 (404)
+.++|++.+...++.|=.+.++||+
T Consensus 324 ~~~~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 324 PELSGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp GGGTTSEEEEEEEETTTEEEEEEEE
T ss_pred CCCCcCEEEEEEEchhhEeEEEEEE
Confidence 7778888888777666677888886
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-27 Score=232.07 Aligned_cols=249 Identities=15% Similarity=0.095 Sum_probs=192.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeE-cccCCcHHHHHHHHHHH
Q 015576 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQS 112 (404)
Q Consensus 34 ~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v-~~aCas~~~al~~A~~~ 112 (404)
+++..+|+.+|+++||+++|+++++||.+++++..+ +..+..+.+++..+|++..++++++ +++|+|++.||..|+.+
T Consensus 81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~ 159 (382)
T 1u0m_A 81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDF 159 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999887 4566789999999999755799999 99999999999999999
Q ss_pred HHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHH
Q 015576 113 IQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (404)
Q Consensus 113 I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~ 192 (404)
|++|.++++||+|+|.++... .
T Consensus 160 i~~g~~~~vLv~g~e~~s~~~--~-------------------------------------------------------- 181 (382)
T 1u0m_A 160 CTAYPEANALIVACEFCSLCY--Q-------------------------------------------------------- 181 (382)
T ss_dssp HHHSTTCEEEEEEEEEGGGGC--C--------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEeccchhc--C--------------------------------------------------------
Confidence 999999999999999886410 0
Q ss_pred HHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecC
Q 015576 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (404)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~ 272 (404)
| ++++ .+.. ..+++ +||||+|+||++
T Consensus 182 -------------------~-------------~d~~-------~~~~--------~~~~l-------fGDGA~A~vL~~ 207 (382)
T 1u0m_A 182 -------------------P-------------TDLG-------VGSL--------LCNGL-------FGDGIAAAVVRG 207 (382)
T ss_dssp -------------------T-------------TCCS-------HHHH--------HHHHH-------BCEEEEEEEEET
T ss_pred -------------------c-------------ccCC-------HHHh--------hccch-------hcCCcEEEEEec
Confidence 0 0000 0000 00233 799999999986
Q ss_pred HHHHHHcCCCceEEEEeeEEec--cCCC------------------cc---ccchHHHHHHHHHHcCCCCCCcceEeecc
Q 015576 273 GVKALELGLQVIAKIRGFADAA--QAPE------------------WF---TTAPSLAIPKAIANAGLEASQIDYYEINE 329 (404)
Q Consensus 273 ~~~a~~~~~~~~~~i~g~~~~~--~~~~------------------~~---~~~~~~a~~~al~~agl~~~dId~~~~hd 329 (404)
.+. .+ .+|.+..... +... .. ..... +++++|+++|++++|||+|.+|+
T Consensus 208 ~~~---~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~ 279 (382)
T 1u0m_A 208 RGG---TG----VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHA 279 (382)
T ss_dssp TTC---SE----EEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEEC
T ss_pred cCC---CC----cEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECC
Confidence 542 11 3455544421 1100 00 11234 89999999999999999999999
Q ss_pred cchHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 330 ~~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.+...+.+.||+++++++++ ..+..+||+.+++....|.+++++-+.++|++.+...++.|..+.++||+.
T Consensus 280 ~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 280 GGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAEMSLGCW 354 (382)
T ss_dssp SHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSSCCCEEEEEETTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCCCEEEEEEEcccceeEEEEEEE
Confidence 99999999999999998887542 234678999999999998888877655678888888888877888888874
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=232.53 Aligned_cols=250 Identities=14% Similarity=0.080 Sum_probs=190.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc-ccCCcHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~-~aCas~~~al~~A~~~I 113 (404)
++..+|+.+|+++||+++|+++++||.+++++..+ ...+..+.+++..+|++..+++++++ ++|+|++.||..|+.+|
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i 171 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG-IIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLA 171 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999876 34567889999999997556999997 89999999999999999
Q ss_pred HcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015576 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~ 193 (404)
++|.+++|||+|+|.++.... .
T Consensus 172 ~~g~~~~vLv~g~e~~s~~~~-~--------------------------------------------------------- 193 (374)
T 2h84_A 172 KASPRNRILVVCTEVCSLHFS-N--------------------------------------------------------- 193 (374)
T ss_dssp TTCTTCEEEEEEEECCGGGCC-C---------------------------------------------------------
T ss_pred HcCCCCEEEEEEEEecchhhc-C---------------------------------------------------------
Confidence 999999999999999875100 0
Q ss_pred HHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCH
Q 015576 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (404)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~ 273 (404)
| .+++ .+ ..+++ +||||+|+||++.
T Consensus 194 ------------------~-------------~dr~---------~~--------~~~~l-------fGDGA~A~vL~~~ 218 (374)
T 2h84_A 194 ------------------T-------------DGGD---------QM--------VASSI-------FADGSAAYIIGCN 218 (374)
T ss_dssp ------------------S-------------SSHH---------HH--------HHHHH-------BCCEEEEEEEESS
T ss_pred ------------------C-------------CCHH---------HH--------hhhhh-------hccCcEEEEEecC
Confidence 0 0000 00 00133 7999999999876
Q ss_pred HHHHHcCCCceEEEEeeEEeccC-----------CC---------cc---ccchHHHHHHHHHHcC------CCCCCcce
Q 015576 274 VKALELGLQVIAKIRGFADAAQA-----------PE---------WF---TTAPSLAIPKAIANAG------LEASQIDY 324 (404)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~-----------~~---------~~---~~~~~~a~~~al~~ag------l~~~dId~ 324 (404)
+.+++ ..+ .++.+.+..... .. .+ .....++++++|+++| ++++|||+
T Consensus 219 ~~~~~--~~~-~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~ 295 (374)
T 2h84_A 219 PRIEE--TPL-YEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEF 295 (374)
T ss_dssp CCTTC--CCC-EEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEE
T ss_pred CCccc--CCc-eeEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCE
Confidence 54321 122 366665543110 00 00 1123578899999999 99999999
Q ss_pred EeecccchHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 325 YEINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
| +|+.++.+...+.+.||++++++.++ -....+||+.+++....|.+++++-+ +|++.+...+++|-.+.++||+.
T Consensus 296 ~-~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~~~--~Gd~vll~~~G~G~t~~~~ll~~ 372 (374)
T 2h84_A 296 L-IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKS--LPTYSISLAFGPGLAFEGCFLKN 372 (374)
T ss_dssp E-ECCCCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTCSC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred e-ECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhhcC--CCCeEEEEEeccchhhhhhhhee
Confidence 9 99999999999999999998887532 12456899999998888877776543 67788877777777888889886
Q ss_pred C
Q 015576 404 M 404 (404)
Q Consensus 404 ~ 404 (404)
+
T Consensus 373 ~ 373 (374)
T 2h84_A 373 V 373 (374)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=269.20 Aligned_cols=276 Identities=18% Similarity=0.171 Sum_probs=210.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC--------eEEEEeccCCC------------------------CCCcHHHHHHH-
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ--------EVFFGNVLSAN------------------------LGQAPARQAAL- 82 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id--------~li~g~~~~~~------------------------~~~~~a~~i~~- 82 (404)
+..+|+.+++++||++||+++++|+ ++++|+..+.. .....+.+++.
T Consensus 2646 p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~ 2725 (3089)
T 3zen_D 2646 RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQS 2725 (3089)
T ss_dssp HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHH
Confidence 4567999999999999999998885 58888764321 01224556665
Q ss_pred HCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccc
Q 015576 83 GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (404)
Q Consensus 83 ~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (404)
.+|+ ++|+++++++|+|++.||+.|+++|++|++|++||+|+|.++..+....
T Consensus 2726 ~lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f------------------------- 2778 (3089)
T 3zen_D 2726 YVGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGF------------------------- 2778 (3089)
T ss_dssp TTCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHH-------------------------
T ss_pred HcCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHH-------------------------
Confidence 4699 5799999999999999999999999999999999999999764111100
Q ss_pred cccccHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHh
Q 015576 163 YNDFGMGVCA-EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM 241 (404)
Q Consensus 163 ~~~~~~~~~a-~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~ 241 (404)
..|+.++ ..++..++.+ ++..++| |+.+
T Consensus 2779 ---~~~~als~~~~~~~~~~s---------------------------------p~~~crp---Fd~~------------ 2807 (3089)
T 3zen_D 2779 ---GDMAATADTEMMRAKGIS---------------------------------DSKFSRA---NDRR------------ 2807 (3089)
T ss_dssp ---HHHTCBCCHHHHHHTTCC---------------------------------TTTSCCS---SBTT------------
T ss_pred ---HHhhhhhcchhhhhccCC---------------------------------cccccCc---cccC------------
Confidence 0000000 0111111111 2455666 7766
Q ss_pred cCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccc------------cchHHHHH
Q 015576 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT------------TAPSLAIP 309 (404)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~------------~~~~~a~~ 309 (404)
++|++ +||||+++||++.+.|++++.++++.|.+.+.+++...... .+...+++
T Consensus 2808 -------~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~ 2873 (3089)
T 3zen_D 2808 -------RLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLA 2873 (3089)
T ss_dssp -------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHH
T ss_pred -------CCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHH
Confidence 78898 69999999999999999999999998888888766432211 12346899
Q ss_pred HHHHHcCCCCCCcceEeecccchHH----HH----HHHHHhCCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHHHhc
Q 015576 310 KAIANAGLEASQIDYYEINEAFSVV----AI----ANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 310 ~al~~agl~~~dId~~~~hd~~~~~----~~----~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
++|+++|++++||||||.|..++.. +. .+.+.||... .+++++++|..+||+.||+|+.+++.++++|+++
T Consensus 2874 ~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g 2953 (3089)
T 3zen_D 2874 RSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDG 2953 (3089)
T ss_dssp HHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcC
Confidence 9999999999999999999888862 22 3456788765 5799999999999999999999999999999975
Q ss_pred C----------------------------------CceeEEeeeccccceeeeEEEe
Q 015576 381 K----------------------------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 381 ~----------------------------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
- .++.+++.++.||.+..+|||.
T Consensus 2954 ~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~ 3010 (3089)
T 3zen_D 2954 VIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVH 3010 (3089)
T ss_dssp CBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEec
Confidence 1 1457788899999999999984
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-27 Score=236.18 Aligned_cols=254 Identities=15% Similarity=0.129 Sum_probs=194.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeE-cccCCcHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v-~~aCas~~~al~~A~~~I 113 (404)
++..+|+.+|+++||+++|+++++||.+++++..+ ...+..+.+++..+|++..++.+++ +.+|+|++.||..|+.+|
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i 189 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYV 189 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999887 4567789999999999755678888 999999999999999999
Q ss_pred HcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015576 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~ 193 (404)
++|.+++|||+|+|.++.... ++.++++.
T Consensus 190 ~~G~~~~vLv~g~e~~s~~~~--------------------------------------------~~~~r~~~------- 218 (393)
T 1ted_A 190 RAHPAMKALVVCIELCSVNAV--------------------------------------------FADDINDV------- 218 (393)
T ss_dssp HHSTTCEEEEEEEEECGGGCC--------------------------------------------CCSSHHHH-------
T ss_pred HcCCCCEEEEEEEEeccccCC--------------------------------------------CCCCHHHh-------
Confidence 999999999999999875100 00000000
Q ss_pred HHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCH
Q 015576 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (404)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~ 273 (404)
..+++ +||||+|+||++.
T Consensus 219 -------------------------------------------------------~~~~l-------fGDGA~A~vL~~~ 236 (393)
T 1ted_A 219 -------------------------------------------------------VIHSL-------FGDGCAALVIGAS 236 (393)
T ss_dssp -------------------------------------------------------HHHHH-------BCEEEEEEEEEEE
T ss_pred -------------------------------------------------------hhhhh-------hcCccEEEEEecC
Confidence 00133 7999999999875
Q ss_pred HHHHHcCCCceEEEEeeEEe--ccCCCc-------------cc--------cchHHHHHHHHHHcCCCCCCcceEeeccc
Q 015576 274 VKALELGLQVIAKIRGFADA--AQAPEW-------------FT--------TAPSLAIPKAIANAGLEASQIDYYEINEA 330 (404)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~--~~~~~~-------------~~--------~~~~~a~~~al~~agl~~~dId~~~~hd~ 330 (404)
+.+...+ ..+++|.+++.. .+.... .. ....++++++|+++|++++|||+|.+|+.
T Consensus 237 ~~~~~~~-~~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~ 315 (393)
T 1ted_A 237 QVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPG 315 (393)
T ss_dssp CTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCS
T ss_pred CCccccC-cceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCC
Confidence 4321111 234577777544 221110 01 12357889999999999999999999999
Q ss_pred chHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHh-cCCceeEEeeeccccceeeeEEEe
Q 015576 331 FSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRH-KKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 331 ~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~-~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
++.+...+.+.||++++++..+ -....+||+.+++....|.+++++-+. ++|++.+...++.|..+.++||+.
T Consensus 316 ~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~~~Gd~vll~~~G~G~t~~~~~l~~ 390 (393)
T 1ted_A 316 GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDI 390 (393)
T ss_dssp CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEE
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccCCCCCeEEEEEeccchhhhhhheee
Confidence 9999999999999998887532 124568999999988888777766554 367888888788877888889885
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=218.91 Aligned_cols=241 Identities=17% Similarity=0.078 Sum_probs=184.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHc
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~a 115 (404)
+..+|+.+|+++||+++|+++++||.+++++++++...+..+..++..||+ +.++++++.+|+|++.||..|..+|++
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~~ 193 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVGG 193 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHHC
Confidence 468999999999999999999999999999998877778889999999999 479999999999999999999999999
Q ss_pred CCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 015576 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (404)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~ 195 (404)
|.+++|||+|+|.+|..
T Consensus 194 g~~~~vLvvg~E~~S~~--------------------------------------------------------------- 210 (392)
T 3led_A 194 GSVDAVLMVNPEICSGH--------------------------------------------------------------- 210 (392)
T ss_dssp TSCSEEEEEEEEEGGGG---------------------------------------------------------------
T ss_pred CCCCEEEEEeehhcCCc---------------------------------------------------------------
Confidence 99999999999998751
Q ss_pred HHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHH
Q 015576 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (404)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~ 275 (404)
++.+ +++ .+..+||||+|+||+..+.
T Consensus 211 ------------------------------~d~~------------------dr~------t~~lFGDGA~A~vl~~~~~ 236 (392)
T 3led_A 211 ------------------------------LNFR------------------DRD------SHFIFGDVATAAIVERADD 236 (392)
T ss_dssp ------------------------------CCTT------------------CTT------TTTTBCEEEEEEEEEEGGG
T ss_pred ------------------------------CCcC------------------ccc------CCcccccccEEEEEEecCC
Confidence 1100 011 2344899999999987642
Q ss_pred HHHcCCCceEEEEeeEEeccC---------------CCc-------cc-----------cchHHHHHHHHHHcCCCCCCc
Q 015576 276 ALELGLQVIAKIRGFADAAQA---------------PEW-------FT-----------TAPSLAIPKAIANAGLEASQI 322 (404)
Q Consensus 276 a~~~~~~~~~~i~g~~~~~~~---------------~~~-------~~-----------~~~~~a~~~al~~agl~~~dI 322 (404)
. .+...|.+....++. +.. +. ....++++++|+++|++++||
T Consensus 237 ~-----~~~~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dI 311 (392)
T 3led_A 237 A-----QGGWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGL 311 (392)
T ss_dssp C-----CSSEEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred C-----CCCCeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 1 011244444332210 000 00 011357899999999999999
Q ss_pred ceEeecccchHHHHHHHHHh-CC--CCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeee
Q 015576 323 DYYEINEAFSVVAIANQKLL-GL--DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~l-g~--~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ 399 (404)
|+|.+|+.+..+...+.+.| |+ +.+++..+ ...+||+.+||-...|.++.. +.++|++.+...++.|-.+.++
T Consensus 312 d~~v~Hqan~~i~~~~~~~llgl~~~~~k~~~~--l~~~GNtssAsipl~L~~~~~--~~~~Gd~vll~gfG~G~t~~~~ 387 (392)
T 3led_A 312 KRMWLHQANINMNEIIGRKVLGRDPTRDENVII--LDDYANTSSAGSIIAFHKHQD--DMAQGDLGLICSFGAGYSAGTV 387 (392)
T ss_dssp SEEEECSSCHHHHHHHHHHHHTSCCCTTTBCCC--HHHHCBCGGGHHHHHHHHCCT--TCCTTCEEEEEEEETTTEEEEE
T ss_pred cEEEEcCCCHHHHHHHHHHhcCCCCCHHHHHHH--HhhhCccHHHHHHHHHHHHhC--CCCCCCEEEEEEEChhhEeEEE
Confidence 99999999999999999986 75 45555433 567899998887777665421 2346778888888887788999
Q ss_pred EEEeC
Q 015576 400 VLELM 404 (404)
Q Consensus 400 ll~~~ 404 (404)
||+..
T Consensus 388 ll~~~ 392 (392)
T 3led_A 388 FVQKR 392 (392)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99863
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=213.42 Aligned_cols=254 Identities=15% Similarity=0.108 Sum_probs=187.2
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
|++..++-..+++ ..+|+.+|+++||+++|+++++||.+++++.++.+..+..+.+++..+|++ ++++++++.+|+|+
T Consensus 39 ~Gi~~R~~a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~ 116 (321)
T 3il6_A 39 TGISERRIVTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGAT-EAFAFDISAACSGF 116 (321)
T ss_dssp HSCSEEECCSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCT-TCEEEEECCGGGHH
T ss_pred cCceEEEECCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCC-CceEEEeCcccHHH
Confidence 3444443333445 999999999999999999999999999999988777788999999999998 48999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~ 182 (404)
+.||..|+.+|++|.++++||+++|.+|..
T Consensus 117 ~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-------------------------------------------------- 146 (321)
T 3il6_A 117 VYALSMAEKLVLSGRYQTGLVIGGETFSKM-------------------------------------------------- 146 (321)
T ss_dssp HHHHHHHHHHHHTSSCCCEEEEEEECGGGG--------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEEcccccc--------------------------------------------------
Confidence 999999999999999999999999998751
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccc
Q 015576 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (404)
Q Consensus 183 ~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (404)
++.+ ++. .+..+|
T Consensus 147 -------------------------------------------~~~~------------------dr~------~~~lfG 159 (321)
T 3il6_A 147 -------------------------------------------LDWT------------------DRS------TAVLFG 159 (321)
T ss_dssp -------------------------------------------SCTT------------------CTT------TGGGBC
T ss_pred -------------------------------------------CCcc------------------ccc------cceeec
Confidence 0000 010 223489
Q ss_pred cccceeeecCHHHHHHcCCCceE-EEEeeEEecc----------CCC---------cccc-c---h---HHHHHHHHHHc
Q 015576 263 DGAAALVLVSGVKALELGLQVIA-KIRGFADAAQ----------APE---------WFTT-A---P---SLAIPKAIANA 315 (404)
Q Consensus 263 DGAaA~vL~~~~~a~~~~~~~~~-~i~g~~~~~~----------~~~---------~~~~-~---~---~~a~~~al~~a 315 (404)
|||+|+||++.+. . ..+. .+...+...+ .+. .+.. + . .+.+.++.+++
T Consensus 160 DGA~A~vl~~~~~----~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 234 (321)
T 3il6_A 160 DGAAGVLIEAAET----P-HFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL 234 (321)
T ss_dssp CEEEEEEEEEESS----C-CEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT
T ss_pred cccEEEEEEEcCC----C-CEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH
Confidence 9999999987541 1 1111 1111110000 000 0000 0 0 12233333332
Q ss_pred CCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCC--ceeEEeeeccc
Q 015576 316 GLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG--KYGVGGICNGG 393 (404)
Q Consensus 316 gl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~--~~gl~~~~~~g 393 (404)
+.++|||+|.+|+.+..+...+.+.||++++++..+ ...+||+.+++-...|.+++++-+-++| ++.+...++.|
T Consensus 235 -l~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~vll~~fG~G 311 (321)
T 3il6_A 235 -VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTN--MDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGG 311 (321)
T ss_dssp -CCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--GGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCEEEEEEEETT
T ss_pred -cCcccCCEEEEcCCCHHHHHHHHHHcCcCHHHhhhh--HhhcccHHHHHHHHHHHHHHHhCCCCCCCCCEEEEEEEehh
Confidence 238999999999999999999999999999887654 5778999999988888887776555677 88888888888
Q ss_pred cceeeeEEEe
Q 015576 394 GGASALVLEL 403 (404)
Q Consensus 394 G~~~a~ll~~ 403 (404)
-.+.++|||.
T Consensus 312 ~t~~~~~l~v 321 (321)
T 3il6_A 312 LTWGSLLLTL 321 (321)
T ss_dssp TEEEEEEEEC
T ss_pred heeEEEEEEC
Confidence 8889999873
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=215.97 Aligned_cols=255 Identities=21% Similarity=0.163 Sum_probs=190.2
Q ss_pred cCccccCCCCCCCC--CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCCCCcceeeEccc
Q 015576 22 RTPMGGFLGSLSSV--SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVVCTTINKV 98 (404)
Q Consensus 22 ~t~~~~~~~~~~~~--~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~~~~~~~~v~~a 98 (404)
+|++.+++-..+++ +..+|+.+|+++||+++|+++++||.+++++...+. ....++..++..+|++ ++++++++.+
T Consensus 37 ~tGi~~r~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~~a 115 (357)
T 3s3l_A 37 LRGIESVTVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLAQR 115 (357)
T ss_dssp HHCCCEEECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEECG
T ss_pred HcCceEEEecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEcCc
Confidence 45555444344455 899999999999999999999999999999984211 1235789999999996 7899999999
Q ss_pred CCcHHHHHHHHHHHHHcCCCC--eEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHH
Q 015576 99 CSSGMKAVMLAAQSIQLGIND--IVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICA 176 (404)
Q Consensus 99 Cas~~~al~~A~~~I~aG~~~--~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 176 (404)
|+|++.||..|..+|++|.++ +|||+++|.+|. +...
T Consensus 116 C~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~-~~~~---------------------------------------- 154 (357)
T 3s3l_A 116 CNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAG-PRID---------------------------------------- 154 (357)
T ss_dssp GGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCT-TTCC----------------------------------------
T ss_pred cHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccc-cccc----------------------------------------
Confidence 999999999999999999999 999999999884 1000
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccC
Q 015576 177 NKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAG 256 (404)
Q Consensus 177 ~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~ 256 (404)
+.+ ++
T Consensus 155 --------------------------------------------------~~~------------------~~------- 159 (357)
T 3s3l_A 155 --------------------------------------------------RWN------------------SV------- 159 (357)
T ss_dssp --------------------------------------------------TTT------------------SS-------
T ss_pred --------------------------------------------------ccc------------------cc-------
Confidence 000 01
Q ss_pred CCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC-------------CC------cc-----------------
Q 015576 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-------------PE------WF----------------- 300 (404)
Q Consensus 257 ~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~-------------~~------~~----------------- 300 (404)
.+..+||||+|+||+..+. . ..|.++...++. +. ..
T Consensus 160 ~~~lfGDGA~A~vl~~~~~-------~-~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 231 (357)
T 3s3l_A 160 DVTMYGDGAAALVLSTRDG-------F-ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPD 231 (357)
T ss_dssp SSCCBCCEEEEEEEESSCC-------S-EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTT
T ss_pred CCcccccccEEEEEecCCC-------C-CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhh
Confidence 2334899999999987531 1 234443332211 00 00
Q ss_pred -----ccchHHHHHHHHHHcCCCCCCcceEee-cccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHH
Q 015576 301 -----TTAPSLAIPKAIANAGLEASQIDYYEI-NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374 (404)
Q Consensus 301 -----~~~~~~a~~~al~~agl~~~dId~~~~-hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~ 374 (404)
.....++++++|+++|++++|||++.+ |+.+.. ...+.+.||++++++...-+ ..+||+.+++-...|.+++
T Consensus 232 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~~~-~~~GNt~aAsipl~L~~~~ 309 (357)
T 3s3l_A 232 LTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSWAYG-RTTGHVGAGDQYAGLAHLV 309 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTHHHH-HHHCBCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHHHhc-cccccchHhHHHHHHHHHH
Confidence 012346789999999999999999996 999988 78889999999988654211 1369999999887887777
Q ss_pred HHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 375 GVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 375 ~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
++-+-++|++.+...++.|..+.++|||.
T Consensus 310 ~~g~l~~Gd~vll~~fG~G~t~~a~ll~~ 338 (357)
T 3s3l_A 310 ENALVQPGDRVLLFGGGAGYTCTAAVVEI 338 (357)
T ss_dssp HTTCCCTTCEEEEECCBTTTEEEEEEEEE
T ss_pred HcCCCCCCCEEEEEEEchhhhheeeeEEe
Confidence 76555678888888787777888999984
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-25 Score=215.84 Aligned_cols=251 Identities=16% Similarity=0.075 Sum_probs=180.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc-eeeEcccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~-~~~v~~aCas~~~al~~A~~~I~ 114 (404)
+..+|+.+|+++||+++|+++++||.++++++++ ...+..+.+++..||+++..+ +++++.+|++++.||..|..+|+
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~ 173 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAE 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999988 556788999999999975443 89999999999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
+|.+++|||+|+|.+|... ..
T Consensus 174 sg~~~~vLvvg~E~~s~~~-~~---------------------------------------------------------- 194 (387)
T 3oit_A 174 NSRGARVLVVAAELTLMYF-TG---------------------------------------------------------- 194 (387)
T ss_dssp SSTTCEEEEEEEECGGGTC-CC----------------------------------------------------------
T ss_pred cCCCCEEEEEEEeccchhc-cC----------------------------------------------------------
Confidence 9999999999999997410 00
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
| -|++ +-.+..+.++||||+|+||+.++
T Consensus 195 -----------------~-------------~d~~----------------------~~~~~~~~lFGDGAaA~vl~~~~ 222 (387)
T 3oit_A 195 -----------------P-------------DEGC----------------------FRTLLVQGLFGDGAAAVIVGADA 222 (387)
T ss_dssp -----------------C-------------CSSS----------------------CHHHHHHHHBCCEEEEEEEESSC
T ss_pred -----------------c-------------cccc----------------------hHhhhcccccccceEEEEEecCC
Confidence 0 0000 00011233489999999998754
Q ss_pred HHHHcCCCceEEEEeeEEeccCCCc---------------cc--------cchHHHHHHHHHHc----CCCCCCcc--eE
Q 015576 275 KALELGLQVIAKIRGFADAAQAPEW---------------FT--------TAPSLAIPKAIANA----GLEASQID--YY 325 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~~~~---------------~~--------~~~~~a~~~al~~a----gl~~~dId--~~ 325 (404)
. . ...+..++.+.+........ +. ....++++++|+++ |++ |+| ++
T Consensus 223 ~--~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~ 297 (387)
T 3oit_A 223 D--D-VERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFW 297 (387)
T ss_dssp C--S-SCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEE
T ss_pred C--c-ccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEE
Confidence 1 1 11233455554433211000 00 11245778888888 887 666 99
Q ss_pred eecccchHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhcCC------ceeEEeeeccccceee
Q 015576 326 EINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG------KYGVGGICNGGGGASA 398 (404)
Q Consensus 326 ~~hd~~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~------~~gl~~~~~~gG~~~a 398 (404)
.+|+.+..+...+.+.||++++++..+ -....+||+.++|-...|.++.++ +.++| ++++...++.|-.+.+
T Consensus 298 v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~~~G~~g~~~d~vll~~fG~G~t~~~ 376 (387)
T 3oit_A 298 AVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RKEAAAAGEWPELGVMMAFGPGMTVDA 376 (387)
T ss_dssp EECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC-----------CCEEEEEEEETTTEEEE
T ss_pred EECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hhccCCCCCCCCEEEEEEecccceeee
Confidence 999999999999999999999887432 113458999999988887776655 33333 6788888888778999
Q ss_pred eEEEeC
Q 015576 399 LVLELM 404 (404)
Q Consensus 399 ~ll~~~ 404 (404)
+||+++
T Consensus 377 ~ll~~~ 382 (387)
T 3oit_A 377 MLLHAT 382 (387)
T ss_dssp EEEEEC
T ss_pred eeeEec
Confidence 999874
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-25 Score=214.73 Aligned_cols=254 Identities=16% Similarity=0.132 Sum_probs=187.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc-eeeEcccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~-~~~v~~aCas~~~al~~A~~~I~ 114 (404)
+..+|+.+|+++||+++|+++++||.++++++++ ...+..+.+++..||+++..+ +++++.+|++++.||..|..+|+
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~ 179 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAE 179 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999988 567889999999999985443 89999999999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
+|.+++|||+|+|.+|... ..
T Consensus 180 sg~~~~vLvvg~E~~s~~~-~~---------------------------------------------------------- 200 (393)
T 3ov2_A 180 NNRGARVLVVACEITVLSF-RG---------------------------------------------------------- 200 (393)
T ss_dssp HSTTCEEEEEEEECGGGTC-CC----------------------------------------------------------
T ss_pred cCCCCEEEEEEEeccchhc-cC----------------------------------------------------------
Confidence 9999999999999987410 00
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
| -|++ +-.+..+.++||||+|+||+.++
T Consensus 201 -----------------~-------------~d~~----------------------~~~~~~~~lFGDGAaA~vl~~~~ 228 (393)
T 3ov2_A 201 -----------------P-------------NEGD----------------------FEALAGQAGFGDGAGAVVVGADP 228 (393)
T ss_dssp -----------------C-------------CTTC----------------------HHHHHHHHHBCCEEEEEEEESSC
T ss_pred -----------------C-------------cccc----------------------hhhhcccccccCccEEEEEEecC
Confidence 0 0000 00001233389999999998754
Q ss_pred HHHHcCCCceEEEEeeEEeccCC--------------------Cc---cccchHHHHHHHHHHcCCCC-CCcceEeeccc
Q 015576 275 KALELGLQVIAKIRGFADAAQAP--------------------EW---FTTAPSLAIPKAIANAGLEA-SQIDYYEINEA 330 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~~--------------------~~---~~~~~~~a~~~al~~agl~~-~dId~~~~hd~ 330 (404)
.. .. ..+...+...+...... .. ......++++++|+++|+++ +|| ++.+|+.
T Consensus 229 ~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~ 305 (393)
T 3ov2_A 229 LE-GI-EKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPG 305 (393)
T ss_dssp CT-TT-CCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCC
T ss_pred CC-cc-cCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCC
Confidence 21 11 12222343333211100 00 01122468999999999997 888 8999999
Q ss_pred chHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHH-H---hcCC---ceeEEeeeccccceeeeEEE
Q 015576 331 FSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVL-R---HKKG---KYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 331 ~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l-~---~~~~---~~gl~~~~~~gG~~~a~ll~ 402 (404)
+..+...+.+.||++++++..+ --...+||+.++|-...|.+++++. + -++| ++.+...++.|-.+.++||+
T Consensus 306 n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~ 385 (393)
T 3ov2_A 306 NWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLR 385 (393)
T ss_dssp CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEE
T ss_pred ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeE
Confidence 9999999999999999887432 1124589999999888888877652 1 1234 77888888787788999998
Q ss_pred eC
Q 015576 403 LM 404 (404)
Q Consensus 403 ~~ 404 (404)
++
T Consensus 386 ~~ 387 (393)
T 3ov2_A 386 SM 387 (393)
T ss_dssp EC
T ss_pred Ec
Confidence 63
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=242.30 Aligned_cols=276 Identities=14% Similarity=0.182 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHHcCC-CCCc----cC----eEEEEeccCCC------------------------CCCcHHHHHHHH
Q 015576 37 ATKLGSIAIECALKRANV-KPLL----VQ----EVFFGNVLSAN------------------------LGQAPARQAALG 83 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi-~~~~----id----~li~g~~~~~~------------------------~~~~~a~~i~~~ 83 (404)
...|+.+++.+||++||+ +|.+ |+ ++++|+..+.. .....+.+++..
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 456999999999999999 4766 55 45555543320 011246688884
Q ss_pred -CCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccc
Q 015576 84 -AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (404)
Q Consensus 84 -lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (404)
+|+ .+|+++++++|+|++.||+.|+..|++|++|++||+|+|.++......
T Consensus 1291 ~lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~~-------------------------- 1342 (1887)
T 2uv8_A 1291 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFE-------------------------- 1342 (1887)
T ss_dssp TTCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH--------------------------
T ss_pred HcCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHH--------------------------
Confidence 898 579999999999999999999999999999999999999875411100
Q ss_pred cccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhc
Q 015576 163 YNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (404)
Q Consensus 163 ~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~ 242 (404)
+...+...+..++++ . + .. ++..++| |+.+
T Consensus 1343 -------------f~~m~als~~~~e~~-----------~-g-----~~----p~~~~RP---fd~~------------- 1372 (1887)
T 2uv8_A 1343 -------------FGNMKATSNTLEEFE-----------H-G-----RT----PAEMSRP---ATTT------------- 1372 (1887)
T ss_dssp -------------HHHTTCBCCHHHHHH-----------T-T-----CC----GGGSCCT---TBTT-------------
T ss_pred -------------HHHhhhhccchhhhc-----------c-c-----CC----CccCcCC---Cccc-------------
Confidence 001111110011100 0 0 00 1345555 5554
Q ss_pred CCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc---------------------c
Q 015576 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF---------------------T 301 (404)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~---------------------~ 301 (404)
++|++ ++||++++||++.+.|+++|.++++.|.|++.+++..... +
T Consensus 1373 ------r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~p 1439 (1887)
T 2uv8_A 1373 ------RNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYA 1439 (1887)
T ss_dssp ------CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSC
T ss_pred ------CCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCC
Confidence 78998 6999999999999999999999999999999998743211 0
Q ss_pred cc----------------------------------------------------------------------------hH
Q 015576 302 TA----------------------------------------------------------------------------PS 305 (404)
Q Consensus 302 ~~----------------------------------------------------------------------------~~ 305 (404)
.. ..
T Consensus 1440 s~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~ 1519 (1887)
T 2uv8_A 1440 SPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRI 1519 (1887)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSS
T ss_pred CcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHH
Confidence 00 03
Q ss_pred HHHHHHHHHcCCCCCCcceEeecccchHH-----HHHHHHHh---CCC-CCCcCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 306 LAIPKAIANAGLEASQIDYYEINEAFSVV-----AIANQKLL---GLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 306 ~a~~~al~~agl~~~dId~~~~hd~~~~~-----~~~~~e~l---g~~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
.+++++|+++|++++|||+++.|..++.. ...+.+.+ |-. ..|+.++..|..+|||.||+|+.+++.++++
T Consensus 1520 ~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~ 1599 (1887)
T 2uv8_A 1520 APLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQI 1599 (1887)
T ss_dssp CHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHH
Confidence 68999999999999999999999999943 11222333 433 2367788889999999999999999999999
Q ss_pred HHhc-------------------------------CCceeEEeeeccccceeeeEEEe
Q 015576 377 LRHK-------------------------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 377 l~~~-------------------------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
|+++ ..++.+++.+++||.+..+|||.
T Consensus 1600 L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~ 1657 (1887)
T 2uv8_A 1600 LNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVH 1657 (1887)
T ss_dssp HTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred HHhCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEec
Confidence 9975 01456788899999999988874
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-25 Score=241.03 Aligned_cols=277 Identities=14% Similarity=0.146 Sum_probs=196.9
Q ss_pred CHHHHHHHHHHHHHHHcCCC-CCc----cC----eEEEEeccCCCC------------------------CCcHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVK-PLL----VQ----EVFFGNVLSANL------------------------GQAPARQAAL 82 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~-~~~----id----~li~g~~~~~~~------------------------~~~~a~~i~~ 82 (404)
+...|+.+++.+||++||++ |.+ |+ ++++|+..+... ....+.+++.
T Consensus 1011 P~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~ 1090 (1688)
T 2pff_A 1011 PITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNM 1090 (1688)
T ss_dssp SSTTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHH
Confidence 44679999999999999997 666 44 344554433210 0114567777
Q ss_pred -HCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccc
Q 015576 83 -GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD 161 (404)
Q Consensus 83 -~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (404)
.+|+ .+|+++++++|+|++.||+.|++.|++|++|++||+|+|.++..+.....
T Consensus 1091 ~~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa----------------------- 1145 (1688)
T 2pff_A 1091 LLISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFG----------------------- 1145 (1688)
T ss_dssp SSCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTT-----------------------
T ss_pred HHcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHH-----------------------
Confidence 6898 57999999999999999999999999999999999999998653221100
Q ss_pred ccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHh
Q 015576 162 VYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM 241 (404)
Q Consensus 162 ~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~ 241 (404)
.|+.++ -+ ...+..... ++..++| |+.+
T Consensus 1146 -----~mgaLS--------~~--------------------~~e~a~G~~----Pd~~cRP---Fd~~------------ 1173 (1688)
T 2pff_A 1146 -----NMKATS--------NT--------------------LEEFEHGRT----PAEMSRP---ATTT------------ 1173 (1688)
T ss_dssp -----TTSCSC--------CT--------------------TTTTTSSCC----SSSSCCS---SSSS------------
T ss_pred -----hccccc--------cC--------------------hhhhhcCCC----hhhccCc---CccC------------
Confidence 000000 00 000000111 1345555 5554
Q ss_pred cCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCcc------c--------------
Q 015576 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF------T-------------- 301 (404)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~------~-------------- 301 (404)
++|++ ++|||+++||++.+.|++++.++++.|.|++.+++..... +
T Consensus 1174 -------rdGfv-------~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~ta 1239 (1688)
T 2pff_A 1174 -------RNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKY 1239 (1688)
T ss_dssp -------CCCCC-------CCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSC
T ss_pred -------CCCCc-------cccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCC
Confidence 78888 6999999999999999999999999999999887743110 0
Q ss_pred -c----------------------------------------------------------------------------ch
Q 015576 302 -T----------------------------------------------------------------------------AP 304 (404)
Q Consensus 302 -~----------------------------------------------------------------------------~~ 304 (404)
. +.
T Consensus 1240 PSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~ 1319 (1688)
T 2pff_A 1240 ASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPR 1319 (1688)
T ss_dssp SSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTT
T ss_pred CCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHH
Confidence 0 00
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccchHH-----HHHHHHHhC---CC-CCCcCCCCCccccCCcccchHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAFSVV-----AIANQKLLG---LD-PEQVNAHGGAVSLGHPLGCSGARILVTLLG 375 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~~~~-----~~~~~e~lg---~~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ 375 (404)
..+++++|+++|++++|||+++.|..++.. ...+.+.++ -. ..|+.++..|..+|||.||+|+.+++.+++
T Consensus 1320 ~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~ll 1399 (1688)
T 2pff_A 1320 IAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQ 1399 (1688)
T ss_dssp CCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHH
Confidence 367899999999999999999999888832 111123332 22 235777788899999999999999999999
Q ss_pred HHHhcC-------------------------------CceeEEeeeccccceeeeEEEe
Q 015576 376 VLRHKK-------------------------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 376 ~l~~~~-------------------------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+|+++- .++.+++.++.||.+..+|||.
T Consensus 1400 aL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~ 1458 (1688)
T 2pff_A 1400 ILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVH 1458 (1688)
T ss_dssp HSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEEC
T ss_pred HHHcCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeC
Confidence 999751 1345678888899998888874
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=210.67 Aligned_cols=253 Identities=14% Similarity=0.070 Sum_probs=188.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc-eeeEcccCCcHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~-~~~v~~aCas~~~al~~A~~~I 113 (404)
++..+|+.+|+++||+++|+++++||.+++++.++ ...+..+.+++..+|++...+ +++++.+|+|++.||..|..+|
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 174 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIA 174 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998876 345678999999999975453 8999999999999999999999
Q ss_pred HcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015576 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (404)
Q Consensus 114 ~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~ 193 (404)
++|.+++|||+++|.++... ..
T Consensus 175 ~~g~~~~vLvvg~e~~s~~~-~~--------------------------------------------------------- 196 (387)
T 3a5r_A 175 ENNKGARVLIVCSEMTTTCF-RG--------------------------------------------------------- 196 (387)
T ss_dssp HHSTTCEEEEEEEECCTTTC-CC---------------------------------------------------------
T ss_pred HhCCCCEEEEEEEeccchhh-cC---------------------------------------------------------
Confidence 99999999999999987510 00
Q ss_pred HHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCH
Q 015576 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (404)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~ 273 (404)
| .+.+ +-.+.++..+||||+|+||++.
T Consensus 197 ------------------~-------------~d~~----------------------~~~~~~~~lfGDGA~A~vl~~~ 223 (387)
T 3a5r_A 197 ------------------P-------------SETH----------------------LDSMIGQAILGDGAAAVIVGAD 223 (387)
T ss_dssp ------------------C-------------CSSC----------------------CSSTTHHHHBCCEEEEEEEESS
T ss_pred ------------------C-------------Cccc----------------------hhhccccceeccceeEEEEecC
Confidence 0 0000 0001122238999999999865
Q ss_pred HHHHHcCCCceEEEEeeEEeccCC--Cc-------------c--------ccchHHHHHHHHHHcCCC-CCCcceEeecc
Q 015576 274 VKALELGLQVIAKIRGFADAAQAP--EW-------------F--------TTAPSLAIPKAIANAGLE-ASQIDYYEINE 329 (404)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~~--~~-------------~--------~~~~~~a~~~al~~agl~-~~dId~~~~hd 329 (404)
+.. .. ..+..++.+.+...... .. + .....++++++|+++|++ .+|| ++.+|+
T Consensus 224 ~~~-~~-~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq 300 (387)
T 3a5r_A 224 PDL-TV-ERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHP 300 (387)
T ss_dssp CCT-TT-CCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECC
T ss_pred CCc-cc-cCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECC
Confidence 421 10 12123555544332100 00 0 011246888999999998 8889 899999
Q ss_pred cchHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhcCC--------ceeEEeeeccccceeeeE
Q 015576 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASALV 400 (404)
Q Consensus 330 ~~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~--------~~gl~~~~~~gG~~~a~l 400 (404)
.+..+...+.+.||++++++..+ --+..+||+.+++-...|.+++++-+ ++| ++.+...++.|-.+.++|
T Consensus 301 ~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~l 379 (387)
T 3a5r_A 301 GGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSL-ENGQATTGEGLEWGVLFGFGPGITVETVV 379 (387)
T ss_dssp SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEE
T ss_pred CCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCcceeeehh
Confidence 99999999999999998876532 11356899999999999999888766 445 788888787777888889
Q ss_pred EEe
Q 015576 401 LEL 403 (404)
Q Consensus 401 l~~ 403 (404)
|+.
T Consensus 380 l~~ 382 (387)
T 3a5r_A 380 LRS 382 (387)
T ss_dssp EEE
T ss_pred hee
Confidence 885
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=237.75 Aligned_cols=276 Identities=17% Similarity=0.164 Sum_probs=201.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-CCc----cC----eEEEEeccCCC-------C-----------------CCcHHHHHHHH
Q 015576 37 ATKLGSIAIECALKRANVK-PLL----VQ----EVFFGNVLSAN-------L-----------------GQAPARQAALG 83 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~-~~~----id----~li~g~~~~~~-------~-----------------~~~~a~~i~~~ 83 (404)
...|+.+++.+||++||++ |.+ |+ ++++|+..+.. . ....+.+++..
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 4568999999999999997 766 44 56666654430 0 00146688884
Q ss_pred -CCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccc
Q 015576 84 -AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (404)
Q Consensus 84 -lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (404)
+|+ .+|+++++++|+|++.+|+.|+..|++|++|++||+|+|.++......
T Consensus 1266 ~lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~~-------------------------- 1317 (1878)
T 2uv9_A 1266 LLSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYE-------------------------- 1317 (1878)
T ss_dssp TCCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHHH--------------------------
T ss_pred hcCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHH--------------------------
Confidence 898 579999999999999999999999999999999999999876411100
Q ss_pred cccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhc
Q 015576 163 YNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (404)
Q Consensus 163 ~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~ 242 (404)
+...+.+.+..++++ .... ++..++| |+.+
T Consensus 1318 -------------f~~m~als~~~de~a-----------------~g~~----p~~~~RP---fd~~------------- 1347 (1878)
T 2uv9_A 1318 -------------FANMGATSNAKEEFA-----------------RGRE----PGEMSRP---TSTT------------- 1347 (1878)
T ss_dssp -------------HHHHTCBCCHHHHHT-----------------TTCC----TTSSCCS---SBTT-------------
T ss_pred -------------HHHhhhhccchhhhh-----------------cCCC----cccCcCC---CccC-------------
Confidence 000111110011111 0000 2445566 5554
Q ss_pred CCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCccc----cc---------------
Q 015576 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT----TA--------------- 303 (404)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~~~----~~--------------- 303 (404)
++|++ .+||++++||++.+.|+++|.++++.|.|++.+++...... .+
T Consensus 1348 ------r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~ 1414 (1878)
T 2uv9_A 1348 ------RNGFM-------ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSP 1414 (1878)
T ss_dssp ------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCG
T ss_pred ------CCCCc-------ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCc
Confidence 78998 69999999999999999999999999999999887432110 00
Q ss_pred --------------------------------------------------------------------------------
Q 015576 304 -------------------------------------------------------------------------------- 303 (404)
Q Consensus 304 -------------------------------------------------------------------------------- 303 (404)
T Consensus 1415 ~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~ 1494 (1878)
T 2uv9_A 1415 LLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFW 1494 (1878)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred ccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence
Q ss_pred ----hHHHHHHHHHHcCCCCCCcceEeecccchHH-HH----HHHHHh---CCC-CCCcCCCCCccccCCcccchHHHHH
Q 015576 304 ----PSLAIPKAIANAGLEASQIDYYEINEAFSVV-AI----ANQKLL---GLD-PEQVNAHGGAVSLGHPLGCSGARIL 370 (404)
Q Consensus 304 ----~~~a~~~al~~agl~~~dId~~~~hd~~~~~-~~----~~~e~l---g~~-~~~vn~~Gg~~~~Gh~~gasG~~~l 370 (404)
...+++++|+++|++++|||++++|..++.. .. .+.+.+ +-. ..|+.++..|..+||+.||+|+.++
T Consensus 1495 ~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~l 1574 (1878)
T 2uv9_A 1495 RRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWML 1574 (1878)
T ss_dssp TTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHH
T ss_pred ccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHH
Confidence 0168999999999999999999999999943 11 122333 332 2357777888999999999999999
Q ss_pred HHHHHHHHhc-------------------------------CCceeEEeeeccccceeeeEEEe
Q 015576 371 VTLLGVLRHK-------------------------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 371 ~~~~~~l~~~-------------------------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+.++++|+++ +.++.+++.++.||.+..+|||.
T Consensus 1575 i~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~ 1638 (1878)
T 2uv9_A 1575 NGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVH 1638 (1878)
T ss_dssp HHHHHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEec
Confidence 9999999974 12456788899999999999874
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-24 Score=209.50 Aligned_cols=256 Identities=14% Similarity=0.047 Sum_probs=192.4
Q ss_pred ccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeE-cccC
Q 015576 21 ARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVC 99 (404)
Q Consensus 21 ~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v-~~aC 99 (404)
.+|++.+++.... ++..+|+.+|+++||+++|+++++||.++++++++ ...+..+.+++..||+++.++.+++ +.+|
T Consensus 122 ~rtgi~~R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~-~~~P~~a~~v~~~LGl~~~~~~~~v~~~~C 199 (413)
T 3v7i_A 122 ASQTVQERTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTT-PALPGLDVALANRLPLRGDTMLLPATQWAC 199 (413)
T ss_dssp CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSS-CCSSCHHHHHHHHTTCCTTCEEEEESSCGG
T ss_pred cCCCHHHhCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCC-CCcCHHHHHHHHHhCCCCCceEEEeeCCcc
Confidence 4677766543333 46889999999999999999999999999999987 4567889999999999866788999 9999
Q ss_pred CcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHc
Q 015576 100 SSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKH 179 (404)
Q Consensus 100 as~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~y 179 (404)
++++.||..|+.+|++|.+++|||+|+|.+|...
T Consensus 200 agg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~---------------------------------------------- 233 (413)
T 3v7i_A 200 VAGTRSLALAADLVAADPDRVVLVVISEALSTTY---------------------------------------------- 233 (413)
T ss_dssp GHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC----------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc----------------------------------------------
Confidence 9999999999999999999999999999998621
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCC
Q 015576 180 TITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNAS 259 (404)
Q Consensus 180 g~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 259 (404)
+.++ ++ .-.+..+.
T Consensus 234 -----------------------------------------------~~~d------------------~~-~~~lv~~~ 247 (413)
T 3v7i_A 234 -----------------------------------------------QPAD------------------DT-LESLIVRL 247 (413)
T ss_dssp -----------------------------------------------CSSC------------------CS-TTHHHHHH
T ss_pred -----------------------------------------------Cccc------------------cc-hhhhhcce
Confidence 0000 00 00011233
Q ss_pred ccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCCc----------------c-------ccchHHHHHHHHH---
Q 015576 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW----------------F-------TTAPSLAIPKAIA--- 313 (404)
Q Consensus 260 ~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~~----------------~-------~~~~~~a~~~al~--- 313 (404)
++||||+|+||++++. ..+..++.+...... |.. + .....++++++|+
T Consensus 248 LFGDGAaAvvl~~~~~-----~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~ 321 (413)
T 3v7i_A 248 LFADTAVAAVVTGRPR-----PESVLRLDAAWHHTL-PGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRY 321 (413)
T ss_dssp HBCCEEEEEEEESSCC-----TTEEEEEEEEEEEEC-TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHT
T ss_pred eeccccEEEEEEecCC-----CCCCEEEEccccEEe-CCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhcc
Confidence 4899999999987542 012234544432211 100 0 0012467889999
Q ss_pred ---HcCCCCCCcceEeecccchHHHHHHHHHhC--CCCCCc---CCCCCccccCCcccchHHHHHHHHHHHHHhcCCcee
Q 015576 314 ---NAGLEASQIDYYEINEAFSVVAIANQKLLG--LDPEQV---NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (404)
Q Consensus 314 ---~agl~~~dId~~~~hd~~~~~~~~~~e~lg--~~~~~v---n~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~g 385 (404)
++|++ ||++.+|+.+..+...+.+.|| ++++++ ..+ .. +||+.++|-...|.+++ +-+.++|+++
T Consensus 322 ~~~~~gl~---id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~--l~-~GNtssAsi~~~L~~~~-~~~~~~Gd~v 394 (413)
T 3v7i_A 322 EDDPSSWH---PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDS--YT-SGNRGGAAVFDILRRAH-DAGQKTGSRA 394 (413)
T ss_dssp SSSCTTCC---CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHH--HT-TCBCGGGHHHHHHHHHH-HHCCCTTCEE
T ss_pred ccccCCCc---eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceE--ec-eeChHHHHHHHHHHHHH-hCCCCCCCEE
Confidence 89997 9999999999999999999999 999887 222 35 89999999888777776 3344567888
Q ss_pred EEeeeccccceeeeEEEe
Q 015576 386 VGGICNGGGGASALVLEL 403 (404)
Q Consensus 386 l~~~~~~gG~~~a~ll~~ 403 (404)
+...++.|-.+.++||+-
T Consensus 395 ll~~fG~Glt~~~~ll~w 412 (413)
T 3v7i_A 395 VLYAAAPGLTATALEGEW 412 (413)
T ss_dssp EEEEEETTTEEEEEEEEE
T ss_pred EEEEECHHHhHhhhheEe
Confidence 888887777888888873
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-24 Score=231.45 Aligned_cols=255 Identities=15% Similarity=0.027 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCC-cceeeEcccCCcHHHHHHHHHHHHHc
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS-VVCTTINKVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~-~~~~~v~~aCas~~~al~~A~~~I~a 115 (404)
..+|+.+|+++||+++|+++++||.++++++.+ ...+..+..++..||++.. +++++++++|+|++.||..|..+|++
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~s 767 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN 767 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHh
Confidence 566999999999999999999999999998654 4567889999999999632 45899999999999999999999999
Q ss_pred CCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 015576 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (404)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~ 195 (404)
|.+++|||+|+|.++.... .
T Consensus 768 G~~~~vLvvg~e~~~~~~~-~----------------------------------------------------------- 787 (979)
T 3tsy_A 768 NAGARVLVVCSEITVVTFR-G----------------------------------------------------------- 787 (979)
T ss_dssp STTCEEEEEEEECTTTTCC-C-----------------------------------------------------------
T ss_pred CCCCEEEEEEEEecchhee-C-----------------------------------------------------------
Confidence 9999999999998654110 0
Q ss_pred HHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHH
Q 015576 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (404)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~ 275 (404)
++ ....-++.+++.+||||+|+||++.+.
T Consensus 788 --------------------------------~~-------------------~~~~~~~~~~~lfGDGA~A~vL~~~~~ 816 (979)
T 3tsy_A 788 --------------------------------PS-------------------EDALDSLVGQALFGDGSAAVIVGSDPD 816 (979)
T ss_dssp --------------------------------CC-------------------SSCHHHHHHHHHBCCEEEEEEEESSCC
T ss_pred --------------------------------CC-------------------ccCHHHHhhhhhccCceEEEEEecCCC
Confidence 00 000001123344899999999998664
Q ss_pred HHHcCCCceEEEEeeEEeccCCCcc-----c----------------cchHHHHHHHHHHcCCCCCCcceEeecccchHH
Q 015576 276 ALELGLQVIAKIRGFADAAQAPEWF-----T----------------TAPSLAIPKAIANAGLEASQIDYYEINEAFSVV 334 (404)
Q Consensus 276 a~~~~~~~~~~i~g~~~~~~~~~~~-----~----------------~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~ 334 (404)
+...+........+........... . ....++++++|+++|++++|||++.+|+.+..+
T Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i 896 (979)
T 3tsy_A 817 ISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAI 896 (979)
T ss_dssp SSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHH
T ss_pred ccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHH
Confidence 4333333333333333322211100 0 014678999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCcCCCC-CccccCCcccchHHHHHHHHHHHHHhcC-C------ceeEEeeeccccceeeeEEEe
Q 015576 335 AIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHKK-G------KYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 335 ~~~~~e~lg~~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~~l~~~~-~------~~gl~~~~~~gG~~~a~ll~~ 403 (404)
...+.+.||++++++..+- -...+||+.+||-...|.++..+++.+. . ++++...+++|-.+.+++|+.
T Consensus 897 ~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~ 973 (979)
T 3tsy_A 897 LDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHS 973 (979)
T ss_dssp HHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEEC
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHh
Confidence 9999999999998875431 1245799999998888888887665321 1 345887787777888899874
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.2e-24 Score=209.09 Aligned_cols=252 Identities=15% Similarity=0.081 Sum_probs=187.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcc-eeeEcccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~-~~~v~~aCas~~~al~~A~~~I~ 114 (404)
+..+|+.+|+++||+++|+++++||.+++++.++ ...+..+.+++..||++...+ +++++.+|+|++.||..|+.+|+
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~ 202 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAE 202 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999887 345678899999999975453 89999999999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
+|.+++|||+|+|.++... .... .
T Consensus 203 ~G~~~~vLvvg~E~~s~~~-~~~~---------------------d---------------------------------- 226 (413)
T 1xes_A 203 NNRGARVLVICSETTAVTF-RGPS---------------------E---------------------------------- 226 (413)
T ss_dssp TSTTCCEEEEEEECTTTTC-CCCC---------------------T----------------------------------
T ss_pred cCCCCEEEEEEehhhhhhh-cCCC---------------------c----------------------------------
Confidence 9999999999999987510 0000 0
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
++ ++.. ..+.+ +||||+|+||++.+
T Consensus 227 --------------------------~~---~~~~-------------------~~~~l-------fGDGA~A~vl~~~~ 251 (413)
T 1xes_A 227 --------------------------TH---LDSL-------------------VGQAL-------FGDGASALIVGADP 251 (413)
T ss_dssp --------------------------TC---HHHH-------------------HHHHH-------BCCEEEEEEEESSC
T ss_pred --------------------------cc---hhhc-------------------cccee-------EecccEEEEEecCC
Confidence 00 0000 01123 89999999998654
Q ss_pred HHHHcCCCceEEEEeeEEeccCC--Cc-------------c--------ccchHHHHHHHHHHcCCC-CCCcceEeeccc
Q 015576 275 KALELGLQVIAKIRGFADAAQAP--EW-------------F--------TTAPSLAIPKAIANAGLE-ASQIDYYEINEA 330 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~~--~~-------------~--------~~~~~~a~~~al~~agl~-~~dId~~~~hd~ 330 (404)
.. .. ..+..++.+.+...... .. + .....++++++|+++|++ .+|| ++.+|+.
T Consensus 252 ~~-~~-~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~ 328 (413)
T 1xes_A 252 IP-QV-EKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPG 328 (413)
T ss_dssp CT-TT-SCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCS
T ss_pred Cc-cc-cCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCC
Confidence 21 10 11123555554321100 00 0 012246888999999998 8888 8999999
Q ss_pred chHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhcCC--------ceeEEeeeccccceeeeEE
Q 015576 331 FSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASALVL 401 (404)
Q Consensus 331 ~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~--------~~gl~~~~~~gG~~~a~ll 401 (404)
+..+...+.+.||++++++..+ --...+||+.+++-...|.+++++-+ ++| ++.+...++.|-.+.++||
T Consensus 329 ~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll 407 (413)
T 1xes_A 329 GRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASL-QNGCSTTGEGLEMGVLFGFGPGLTIETVVL 407 (413)
T ss_dssp CHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEE
T ss_pred CHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCCcEEeEEEE
Confidence 9999999999999999887431 11345899999999999999888766 444 7888887887778888898
Q ss_pred Ee
Q 015576 402 EL 403 (404)
Q Consensus 402 ~~ 403 (404)
+.
T Consensus 408 ~~ 409 (413)
T 1xes_A 408 KS 409 (413)
T ss_dssp EE
T ss_pred Ee
Confidence 85
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=207.72 Aligned_cols=255 Identities=16% Similarity=0.178 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeE-cccCCcHHHHHHHHHHHHHc-
Q 015576 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQL- 115 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v-~~aCas~~~al~~A~~~I~a- 115 (404)
.+|+.+|+++||+++|+++++||.||+++++ .+..+..+.+++..||+++...++++ +.+|++++.||..|..+|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~ 189 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGH 189 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcc
Confidence 5999999999999999999999999999987 45678899999999999854448999 79999999999999999997
Q ss_pred ---CCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHH
Q 015576 116 ---GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (404)
Q Consensus 116 ---G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~ 192 (404)
|.+++|||+++|.+|....... +.+.
T Consensus 190 ~~~G~~~~vLVvg~E~~S~~~~~~~----------------------------------------------~~~~----- 218 (465)
T 3e1h_A 190 TARGKPARILVLALEVSTTMVRSEL----------------------------------------------ESID----- 218 (465)
T ss_dssp HHTTCCCEEEEEEEECCGGGHHHHH----------------------------------------------HHHH-----
T ss_pred cccCCCCEEEEEEEeecchhcCccc----------------------------------------------cccc-----
Confidence 9999999999999876210000 0000
Q ss_pred HHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecC
Q 015576 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (404)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~ 272 (404)
++. . .+..++++||||+|+||+.
T Consensus 219 -------~~~-------------------------~-------------------------d~~t~~LFGDGAaAvVl~~ 241 (465)
T 3e1h_A 219 -------ALQ-------------------------E-------------------------TRIGIALFSDCASAVILSN 241 (465)
T ss_dssp -------HHT-------------------------C-------------------------CCCHHHHBCCEEEEEEEEC
T ss_pred -------ccc-------------------------c-------------------------ccccccccccceeEEEEEc
Confidence 000 0 0113344899999999987
Q ss_pred HHHHHHcCCCceEEEEeeEEeccCC--------------------Ccc---ccchHHHHHHHHHH-------cCCCCCCc
Q 015576 273 GVKALELGLQVIAKIRGFADAAQAP--------------------EWF---TTAPSLAIPKAIAN-------AGLEASQI 322 (404)
Q Consensus 273 ~~~a~~~~~~~~~~i~g~~~~~~~~--------------------~~~---~~~~~~a~~~al~~-------agl~~~dI 322 (404)
.+... ....++..+.++....... ..+ .....++++++|++ +|++++||
T Consensus 242 ~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DI 320 (465)
T 3e1h_A 242 GIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADF 320 (465)
T ss_dssp CTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGS
T ss_pred cCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHc
Confidence 53210 0122233555544332110 000 01124678888887 67999999
Q ss_pred ceEeecccchHHHHHHHHHhCCCCCCcCCCCC-ccccCCcccchHHHHHHHHHHH----HHhc--CCceeEEeeeccccc
Q 015576 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGG-AVSLGHPLGCSGARILVTLLGV----LRHK--KGKYGVGGICNGGGG 395 (404)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg-~~~~Gh~~gasG~~~l~~~~~~----l~~~--~~~~gl~~~~~~gG~ 395 (404)
|++ +|+.+..+...+.+.||++++++..+-- ..-+||+.++|-...|.+++++ ++.. .+++.+...++.|-.
T Consensus 321 d~~-~Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~g~l~~Gg~~~d~vll~gfG~Glt 399 (465)
T 3e1h_A 321 DWA-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGIN 399 (465)
T ss_dssp EEE-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTTTSCSSSSCCCSEEEEEEEETTTE
T ss_pred eEE-ecCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcccccCCCCCCCCEEEEEEEhHHHh
Confidence 998 9999999999999999999987633210 1246999888866666666543 1111 226777777777668
Q ss_pred eeeeEEEe
Q 015576 396 ASALVLEL 403 (404)
Q Consensus 396 ~~a~ll~~ 403 (404)
+.++||+.
T Consensus 400 ~~~~llr~ 407 (465)
T 3e1h_A 400 VEMCMLKR 407 (465)
T ss_dssp EEEEEEEE
T ss_pred hhheeeEE
Confidence 88888875
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-23 Score=241.37 Aligned_cols=262 Identities=20% Similarity=0.211 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC-----CC--------------CcHHHHHHHHCCCCCCccee
Q 015576 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----LG--------------QAPARQAALGAGIPNSVVCT 93 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~-----~~--------------~~~a~~i~~~lGl~~~~~~~ 93 (404)
...|+.+++.+||++||+++++++ ++++|+...++ .+ ...+.+++..+|+ ++|++
T Consensus 78 q~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~ 155 (2512)
T 2vz8_A 78 QLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSI 155 (2512)
T ss_dssp HHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCce
Confidence 345899999999999999987765 58888765432 00 1267899999999 68999
Q ss_pred eEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHH
Q 015576 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (404)
Q Consensus 94 ~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (404)
+|+++|+|++.||+.|++.|++|++|.+||+|++.+.. |..... |.
T Consensus 156 tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~-p~~~~~-----------------------------~~---- 201 (2512)
T 2vz8_A 156 TIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLK-PNSSLQ-----------------------------FM---- 201 (2512)
T ss_dssp EEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCC-HHHHHH-----------------------------HH----
T ss_pred eeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccC-HHHHHH-----------------------------Hc----
Confidence 99999999999999999999999999999999998776 432210 00
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCcc
Q 015576 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253 (404)
Q Consensus 174 ~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~ 253 (404)
+.+.+. ++..|+| ||.+ .+|++
T Consensus 202 ----------------------------~~~~ls--------~~g~c~~---Fd~~-------------------adG~~ 223 (2512)
T 2vz8_A 202 ----------------------------KLGMLS--------QDGTCRS---FDAE-------------------GTGYC 223 (2512)
T ss_dssp ----------------------------HTTCBC--------TTCSCCS---SSTT-------------------CCCBC
T ss_pred ----------------------------cCCCCC--------CCCCCCC---CCCC-------------------CCCcc
Confidence 001111 3567888 8887 89999
Q ss_pred ccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccCCC---c---cccchHHHHHHHHHHcCCCCCCcceEee
Q 015576 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE---W---FTTAPSLAIPKAIANAGLEASQIDYYEI 327 (404)
Q Consensus 254 ~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~~~---~---~~~~~~~a~~~al~~agl~~~dId~~~~ 327 (404)
+|||++++||.+.+.|+ ++++.|+|++.++|+.. . ...+..++++++|++||++|+||||||.
T Consensus 224 -------~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yvea 292 (2512)
T 2vz8_A 224 -------RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEA 292 (2512)
T ss_dssp -------BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEEC
T ss_pred -------eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 59999999999887764 68999999999988632 1 1234578999999999999999999999
Q ss_pred cccchHH-----HHHHHHHhCCC-CCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC--------------------
Q 015576 328 NEAFSVV-----AIANQKLLGLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------------- 381 (404)
Q Consensus 328 hd~~~~~-----~~~~~e~lg~~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~-------------------- 381 (404)
|-..+.. ...+.+.+|-. ..|+.+++.|..+||+.+|+|+..++.++..|+++-
T Consensus 293 HGTgT~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~ 372 (2512)
T 2vz8_A 293 HGTGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDG 372 (2512)
T ss_dssp CCCCCTTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSS
T ss_pred ecCCCCCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccC
Confidence 9887754 23345566643 246888899999999999999999999999998751
Q ss_pred ------------CceeEEeeeccccceeeeEEEe
Q 015576 382 ------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 ------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++..++.++.||.+..+|||.
T Consensus 373 ~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~ 406 (2512)
T 2vz8_A 373 RLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQP 406 (2512)
T ss_dssp SCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEE
T ss_pred ceEecCCCccCCCCeEEEeccCCCCceeEEEEcc
Confidence 1245678899999999999984
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=206.03 Aligned_cols=243 Identities=14% Similarity=0.082 Sum_probs=180.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHH
Q 015576 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (404)
Q Consensus 32 ~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~ 111 (404)
.++++..+|+.+|+++||++ +++++||.+++++.++....+..+..++..+|++.++++++++++|+|++.||..|..
T Consensus 46 ~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~ 123 (396)
T 1xpm_A 46 PVNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD 123 (396)
T ss_dssp CTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHH
Confidence 35789999999999999998 6899999999999988777788999999999997568999999999999999999999
Q ss_pred HHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHH
Q 015576 112 SIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAI 191 (404)
Q Consensus 112 ~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~ 191 (404)
+|++|.+++|||+|+|. +...
T Consensus 124 ~I~sg~~~~vLvvg~e~-s~~~---------------------------------------------------------- 144 (396)
T 1xpm_A 124 YLATRPNEKVLVIATDT-ARYG---------------------------------------------------------- 144 (396)
T ss_dssp HHTTCTTCEEEEEEEEE-ECCC----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEeehh-hccc----------------------------------------------------------
Confidence 99999999999999996 3200
Q ss_pred HHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeec
Q 015576 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLV 271 (404)
Q Consensus 192 ~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~ 271 (404)
++. +++++ +||||+|+||+
T Consensus 145 ----------------------------------~~~--------------------~~~~~-------~GdGA~A~vl~ 163 (396)
T 1xpm_A 145 ----------------------------------LNS--------------------GGEPT-------QGAGAVAMVIA 163 (396)
T ss_dssp ----------------------------------TTC--------------------SSGGG-------CEEEEEEEEEE
T ss_pred ----------------------------------cCC--------------------CCCcc-------cccceEEEEec
Confidence 000 11233 89999999998
Q ss_pred CHHHHHHcCCCceEEEEeeEEec-c-----CCCc------ccc--------chHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 272 SGVKALELGLQVIAKIRGFADAA-Q-----APEW------FTT--------APSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 272 ~~~~a~~~~~~~~~~i~g~~~~~-~-----~~~~------~~~--------~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
+++ .++....+.+... + .|.. .+. ...++++++|+++|++++|||++.+|+++
T Consensus 164 ~~~-------~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~ 236 (396)
T 1xpm_A 164 HNP-------SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPF 236 (396)
T ss_dssp ESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSS
T ss_pred cCC-------ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCc
Confidence 642 2333333333322 1 1111 111 14678999999999999999999999999
Q ss_pred hHHHHHHHHHh-----CCCCCCcC--C---CCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEE
Q 015576 332 SVVAIANQKLL-----GLDPEQVN--A---HGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (404)
Q Consensus 332 ~~~~~~~~e~l-----g~~~~~vn--~---~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll 401 (404)
+.......+.+ +++++++. + .--...+||+.++|-...|.+++..-+-++|++.+...++.|-...++++
T Consensus 237 ~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~Gd~ill~s~GsG~~~~~~~~ 316 (396)
T 1xpm_A 237 TKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSA 316 (396)
T ss_dssp HHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTTCEEEEEEEETTTEEEEEEE
T ss_pred hHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEECcchhheEEEE
Confidence 99888878877 55544321 0 00024589999999888888887764345677777766655545555666
Q ss_pred Ee
Q 015576 402 EL 403 (404)
Q Consensus 402 ~~ 403 (404)
+.
T Consensus 317 ~v 318 (396)
T 1xpm_A 317 TL 318 (396)
T ss_dssp EE
T ss_pred EE
Confidence 53
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-23 Score=195.90 Aligned_cols=235 Identities=18% Similarity=0.193 Sum_probs=167.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHH
Q 015576 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 35 ~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~ 114 (404)
+...+|+.+|+++||+++|++++|||.+++++.+++. ..+..++..+|+ |+++++.+|+|++.+|..|+.+|+
T Consensus 53 ~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~---~~A~~va~~Lgi----pafdV~~ACsg~~~AL~~Aa~~I~ 125 (347)
T 3lma_A 53 MAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN---VTANYVARHLKI----PFLCLFGACSTSMESIAISSALID 125 (347)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS---TTHHHHHHHHCC----CEEEBCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch---hHHHHHHHHhCC----CEEEecChhHHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999998732 267788888854 799999999999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
+|.+++|||+|+|++|+.+.....
T Consensus 126 sG~~~~VLVVGaE~~S~aerq~r~-------------------------------------------------------- 149 (347)
T 3lma_A 126 GGFAKRALAATSSHNATAERQFRY-------------------------------------------------------- 149 (347)
T ss_dssp TTSCSEEEEEEEECGGGTTCCC----------------------------------------------------------
T ss_pred cCCCCEEEEEEeccccchhhhccC--------------------------------------------------------
Confidence 999999999999999985432110
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
|.+. ...+| . .+..++|||+|+||....
T Consensus 150 -----------------p~e~--g~q~p-----------------------~----------ta~~t~dGAGA~VL~~~g 177 (347)
T 3lma_A 150 -----------------PTEY--GGQKP-----------------------G----------TATSTVTGSGAVVLSQQP 177 (347)
T ss_dssp ------------------------------------------------------------------CCCEEEEEEEESSC
T ss_pred -----------------cchh--cccCC-----------------------c----------hhcEEccceeEEEEEecC
Confidence 0000 00000 0 111157999999998642
Q ss_pred HHHHcCCCceEEEEeeEEec------cCCCccccc----hHHHHHHHHHHcCCCCCCcceEe---ecccchHHHHHHHHH
Q 015576 275 KALELGLQVIAKIRGFADAA------QAPEWFTTA----PSLAIPKAIANAGLEASQIDYYE---INEAFSVVAIANQKL 341 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~------~~~~~~~~~----~~~a~~~al~~agl~~~dId~~~---~hd~~~~~~~~~~e~ 341 (404)
..| +|.+..... .++..+... ..+.+.+.|+++|++++|+|+|. +|+.+..+...+++.
T Consensus 178 ------~~p--~I~~~t~Gkvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~ 249 (347)
T 3lma_A 178 ------GGI--KITSATVGRVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKE 249 (347)
T ss_dssp ------CSE--EEEEEECCCCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHH
T ss_pred ------CCC--ceeeeeeeeeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHH
Confidence 122 344433221 133333322 24567889999999999999999 777888788888999
Q ss_pred hCCCCCCcCCCCCccccCCc---------ccchHHHHHHHHHHHHHhcCCceeEEeeecc
Q 015576 342 LGLDPEQVNAHGGAVSLGHP---------LGCSGARILVTLLGVLRHKKGKYGVGGICNG 392 (404)
Q Consensus 342 lg~~~~~vn~~Gg~~~~Gh~---------~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~ 392 (404)
+|++.++....=|..-|+.. -|++....-..++.+|+.+..++-|+...+.
T Consensus 250 ~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~~ril~~~tGa 309 (347)
T 3lma_A 250 EGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKEIEAGRLNRVLVVATGA 309 (347)
T ss_dssp TTCCCGGGEEEGGGTSSCC---------CCCCHHHHHHHTHHHHHHTTSCSEEEEEEEEE
T ss_pred cCCChhHCccccceEEecCCCcccCCCCccccHHHHHHHHHHHHHhcCcccEEEEEeccc
Confidence 99987654433233333322 2677777778889999988888887765544
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.9e-23 Score=200.27 Aligned_cols=234 Identities=15% Similarity=0.091 Sum_probs=173.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHH
Q 015576 31 SLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAA 110 (404)
Q Consensus 31 ~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~ 110 (404)
..++++..+|+.+|+++||++++ +++||.|++++.++....+..+..++..||+++++++++++.+|++++.||..|.
T Consensus 50 ~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~ 127 (388)
T 3v4n_A 50 NPISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAK 127 (388)
T ss_dssp CCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHH
Confidence 34578999999999999999997 8999999999999887778899999999999856899999999999999999999
Q ss_pred HHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHH
Q 015576 111 QSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190 (404)
Q Consensus 111 ~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~ 190 (404)
.+|++|.+++|||+++|.++...
T Consensus 128 ~~i~sg~~~~vLVvg~e~~s~~~--------------------------------------------------------- 150 (388)
T 3v4n_A 128 NHVALHPDKKVLVVAADIAKYGL--------------------------------------------------------- 150 (388)
T ss_dssp HHHHHCTTCEEEEEEEEEECCCT---------------------------------------------------------
T ss_pred HHHhcCCCCEEEEEEehhhcccC---------------------------------------------------------
Confidence 99999999999999999987510
Q ss_pred HHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeee
Q 015576 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVL 270 (404)
Q Consensus 191 ~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL 270 (404)
+. + ++..+||||+|+||
T Consensus 151 ------------------------------------~~--------------------~-------~~~lfGDGA~A~ll 167 (388)
T 3v4n_A 151 ------------------------------------NS--------------------G-------GEPTQGAGAVAMLV 167 (388)
T ss_dssp ------------------------------------TC--------------------T-------TGGGCEEEEEEEEE
T ss_pred ------------------------------------CC--------------------C-------CCCccccceeEEEe
Confidence 00 0 01227999999999
Q ss_pred cCHHHHHHcCCCceEEEE--eeEEeccC-----CCc--c------------ccchHHHHHHHHHHcCCCCCCcceEeecc
Q 015576 271 VSGVKALELGLQVIAKIR--GFADAAQA-----PEW--F------------TTAPSLAIPKAIANAGLEASQIDYYEINE 329 (404)
Q Consensus 271 ~~~~~a~~~~~~~~~~i~--g~~~~~~~-----~~~--~------------~~~~~~a~~~al~~agl~~~dId~~~~hd 329 (404)
..++ .+ ..+. ..+...+. |.. . ......+++++|+++|++++|||++.+|+
T Consensus 168 ~~~~-------~i-l~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hq 239 (388)
T 3v4n_A 168 SSEP-------RI-LALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHI 239 (388)
T ss_dssp EESC-------SS-EEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECC
T ss_pred ecCC-------Cc-eEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCC
Confidence 8643 11 1111 11111111 110 0 01225689999999999999999999999
Q ss_pred cchHHH------------HHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHH-HHhcCCceeEEeeeccccce
Q 015576 330 AFSVVA------------IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV-LRHKKGKYGVGGICNGGGGA 396 (404)
Q Consensus 330 ~~~~~~------------~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~-l~~~~~~~gl~~~~~~gG~~ 396 (404)
+|.... ....+.|+++.++.... ...+||+..+|-...|.+++.+ -+.++|++.+...++.|-.+
T Consensus 240 p~~k~~~ka~~ril~~~~~~~~~~l~~~~e~~~~~--~~~~GN~~sASi~l~L~~~l~~~g~~~~Gd~ill~s~GsG~~a 317 (388)
T 3v4n_A 240 PYTKMGKKALLAKISDQTEAEQERILARYEESIIY--SRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGAVA 317 (388)
T ss_dssp SSHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTTT--GGGTCCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEE
T ss_pred CcchHHHHHHHHHHhcccHHHHHHhCCCHHHHhhH--HHhcCchHHHHHHHHHHHHHHhcCcCCCCCEEEEEEecCccee
Confidence 886532 23456677766654433 4568999999988888887776 33456777776655443333
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=194.89 Aligned_cols=245 Identities=13% Similarity=0.097 Sum_probs=180.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCC--CCCcceeeEcccCCcHHHHHHHHH
Q 015576 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGI--PNSVVCTTINKVCSSGMKAVMLAA 110 (404)
Q Consensus 33 ~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl--~~~~~~~~v~~aCas~~~al~~A~ 110 (404)
++++..+|+.+|+++||+++|+++++||.+++++.++....+..+..++..+|+ ++++++++++.+|+|++.||..|.
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~ 127 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCV 127 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHH
Confidence 468999999999999999999999999999999998877778899999999998 447899999999999999999999
Q ss_pred HHHHcCCC--CeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHH
Q 015576 111 QSIQLGIN--DIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188 (404)
Q Consensus 111 ~~I~aG~~--~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~ 188 (404)
.+|++|.+ ++|||+|+|.++..+.
T Consensus 128 ~~I~sg~~~~~~vLVvg~e~~~~~~~------------------------------------------------------ 153 (450)
T 2f82_A 128 NWVESNSWDGRYGLVICTDSAVYAEG------------------------------------------------------ 153 (450)
T ss_dssp HHHHSTTCCSCEEEEEEEEEECCSSS------------------------------------------------------
T ss_pred HHHHcCCCcCCeEEEEEeeeccccCC------------------------------------------------------
Confidence 99999997 9999999998642000
Q ss_pred HHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCcccccccee
Q 015576 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAAL 268 (404)
Q Consensus 189 ~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~ 268 (404)
...++ +||||+|+
T Consensus 154 ------------------------------------------------------------~~~~~-------fGDGA~A~ 166 (450)
T 2f82_A 154 ------------------------------------------------------------PARPT-------GGAAAIAM 166 (450)
T ss_dssp ------------------------------------------------------------TTGGG-------CEEEEEEE
T ss_pred ------------------------------------------------------------CCCcc-------cccceEEE
Confidence 00122 79999999
Q ss_pred eecCHHHHHHcCCCceEEEEeeEEecc----CCCc-----cc----------cchHHHHHHHHH------HcCCCCCCcc
Q 015576 269 VLVSGVKALELGLQVIAKIRGFADAAQ----APEW-----FT----------TAPSLAIPKAIA------NAGLEASQID 323 (404)
Q Consensus 269 vL~~~~~a~~~~~~~~~~i~g~~~~~~----~~~~-----~~----------~~~~~a~~~al~------~agl~~~dId 323 (404)
||..++. . .......+...... .|.. .. .....+++++++ ++|++++|||
T Consensus 167 ll~~~~~---~--~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~did 241 (450)
T 2f82_A 167 LIGPDAP---I--VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDAD 241 (450)
T ss_dssp EEESSCS---E--EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGCS
T ss_pred EeccCCc---e--EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhcC
Confidence 9986531 1 01111123222210 1110 00 012467778886 8899999999
Q ss_pred eEeecccchHHHHHHHHHhCC------------------CC----------------------------CCcCCCC-Ccc
Q 015576 324 YYEINEAFSVVAIANQKLLGL------------------DP----------------------------EQVNAHG-GAV 356 (404)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lg~------------------~~----------------------------~~vn~~G-g~~ 356 (404)
++.+|+++..+.....+.|++ ++ +++.++- -..
T Consensus 242 ~~v~Hq~~~~i~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~~ 321 (450)
T 2f82_A 242 YFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPK 321 (450)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHHH
T ss_pred EEEecCChHHHHHHHHHHhcccccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHHH
Confidence 999999999999999999983 21 1111110 023
Q ss_pred ccCCcccchHHHHHHHHHHHHH-hcCCceeEEeeeccccceeeeEEEe
Q 015576 357 SLGHPLGCSGARILVTLLGVLR-HKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 357 ~~Gh~~gasG~~~l~~~~~~l~-~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.+||+..+|-...|.+++.+-+ ..+|++.+...++.|-.+.+++++.
T Consensus 322 ~~GN~~saSi~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~~~~~~l~~ 369 (450)
T 2f82_A 322 QVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRL 369 (450)
T ss_dssp HHCCCGGGHHHHHHHHHHHHHGGGCTTCEEEEEEEETTTEEEEEEEEE
T ss_pred hcCchHHHHHHHHHHHHHHhCccCCCCCEEEEEeecCCcccEEEEEEE
Confidence 5899999998888888888753 4578887777666665666666663
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=184.69 Aligned_cols=110 Identities=13% Similarity=0.119 Sum_probs=93.2
Q ss_pred eEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHH---CCCCCCcc
Q 015576 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALG---AGIPNSVV 91 (404)
Q Consensus 15 v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~---lGl~~~~~ 91 (404)
.++.|.|++.+... .++++..+|+.+|+++||+++|+++++||.+++++.++....+..+..++.. +|++ +++
T Consensus 54 ~~~~~~Gi~~r~~~---~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~-~~~ 129 (478)
T 2p8u_A 54 KYTIGLGQAKMGFC---TDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNT-DIE 129 (478)
T ss_dssp CCCCCCCCCEEECC---CTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCC-CCB
T ss_pred HhecccCceEEEeC---CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCC-Cce
Confidence 34455555544322 2468999999999999999999999999999999998877677889999944 5555 689
Q ss_pred eeeEcccCCcHHHHHHHHHHHHHcCC--CCeEEEecccc
Q 015576 92 CTTINKVCSSGMKAVMLAAQSIQLGI--NDIVVAGGMES 128 (404)
Q Consensus 92 ~~~v~~aCas~~~al~~A~~~I~aG~--~~~vLv~g~e~ 128 (404)
+++++++|++++.||..|..+|++|. .++|||+++|.
T Consensus 130 ~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 130 GIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred EEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 99999999999999999999999999 99999999994
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.8e-18 Score=170.96 Aligned_cols=96 Identities=11% Similarity=-0.045 Sum_probs=85.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCC--CCcceeeEcccCCcHHHHHH
Q 015576 30 GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP--NSVVCTTINKVCSSGMKAVM 107 (404)
Q Consensus 30 ~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~--~~~~~~~v~~aCas~~~al~ 107 (404)
-..++++..+|+++|+++||+++|++|++||.|++++.++....+..+..++..||+. .++.+++++.+|++++.||.
T Consensus 47 ~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~ 126 (460)
T 2wya_A 47 FCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLF 126 (460)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHH
Confidence 3456789999999999999999999999999999999999888889999999998742 35788999999999999999
Q ss_pred HHHHHHHcCCCCeEEEec
Q 015576 108 LAAQSIQLGINDIVVAGG 125 (404)
Q Consensus 108 ~A~~~I~aG~~~~vLv~g 125 (404)
.|..+|++|..+.++++.
T Consensus 127 ~A~~~i~~g~~~~~lvvv 144 (460)
T 2wya_A 127 NAANWMESSSWDGRYAMV 144 (460)
T ss_dssp HHHHHHTSTTCCSCEEEE
T ss_pred HHHHHHHhccccceEEEE
Confidence 999999999877655553
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=94.58 E-value=0.16 Score=48.07 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeec-----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~h-----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l 377 (404)
..+|++++|+++|++++|||++.+. +..+.....+.+.||+...+. ..+ ..+|+|.. .+..+...+
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~a------~di--~~~C~g~~~aL~~A~~~i 137 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAPA------YDV--SAACAGYCYGVAQADALV 137 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSCE------EEE--ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCceE------EEe--ecchhhHHHHHHHhhhhh
Confidence 3689999999999999999988742 233455667788999864321 112 23566644 455555556
Q ss_pred HhcCCceeEEe
Q 015576 378 RHKKGKYGVGG 388 (404)
Q Consensus 378 ~~~~~~~gl~~ 388 (404)
+....++.|+.
T Consensus 138 ~~g~~~~~Lvv 148 (350)
T 4ewp_A 138 RSGTARHVLVV 148 (350)
T ss_dssp HTTSCSEEEEE
T ss_pred hCCCccceeEe
Confidence 66566676644
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=92.99 E-value=0.27 Score=46.01 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...|++++|+++|++++|||.+.+-.. .+.....+.+.||+...+. ..+. ...++++..+..+...++
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~------~~v~-~aC~s~~~al~~A~~~i~ 128 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFA------FDIS-AACSGFVYALSMAEKLVL 128 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCEE------EEEC-CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCceE------EEeC-cccHHHHHHHHHHHHHHH
Confidence 468999999999999999999875322 2334566778899864211 1122 223455667777777777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 129 ~g~~~~vL 136 (321)
T 3il6_A 129 SGRYQTGL 136 (321)
T ss_dssp TSSCCCEE
T ss_pred CCCCCEEE
Confidence 66555554
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=92.66 E-value=0.54 Score=44.61 Aligned_cols=77 Identities=18% Similarity=0.090 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+|++++|+++|++++|||.+.+... .......+.+.||+... ... ..+ +...++|+..+..+...++
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~-~~~----~~v-~~aC~s~~~al~~A~~~i~ 143 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPAS-CLA----LDI-NLGCSGYPQALWLGMNLIQ 143 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTT-SEE----EEE-CCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCC-ccE----Eee-CcccHHHHHHHHHHHHHHH
Confidence 368999999999999999999875422 23345667788998532 111 112 2334456667777777777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 144 ~g~~~~vL 151 (354)
T 4efi_A 144 TGAAKRVL 151 (354)
T ss_dssp TTSCSEEE
T ss_pred CCCCCEEE
Confidence 66556655
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=92.17 E-value=0.4 Score=44.90 Aligned_cols=76 Identities=20% Similarity=0.134 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+|++++|+++|++++|||.+.+... .+.....+.+.||+...+. ..+ +...++|+..+..+...++
T Consensus 62 a~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~------~~v-~~~C~s~~~al~~A~~~i~ 134 (323)
T 3il3_A 62 GFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAIS------FDL-AAACTGFVYALSVADQFIR 134 (323)
T ss_dssp HHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCSSCEE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCCCccE------EEE-CCccHHHHHHHHHHHHHHH
Confidence 378999999999999999999875322 2334556778899842221 112 1223455667777777777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 135 ~g~~~~vL 142 (323)
T 3il3_A 135 AGKVKKAL 142 (323)
T ss_dssp TTSCSEEE
T ss_pred CCCCCEEE
Confidence 66555554
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=92.16 E-value=0.66 Score=43.51 Aligned_cols=77 Identities=19% Similarity=0.225 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+|++++|+++|++++|||.+.+... .......+.+.||++.. .. ...+ +...++++..+..+...++
T Consensus 69 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~-~~----~~~v-~~~C~s~~~al~~A~~~i~ 142 (333)
T 4dfe_A 69 AFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNH-GA----AFDV-QAVCSGFAYAVATADSFIR 142 (333)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSC-CE----EEEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCC-Cc----EEEe-CcccHHHHHHHHHHHHHHH
Confidence 468999999999999999999875322 23345667788998432 11 1112 2334456667777778887
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 143 ~g~~~~vL 150 (333)
T 4dfe_A 143 SGQHRTAL 150 (333)
T ss_dssp TTSCSEEE
T ss_pred cCCCCEEE
Confidence 66556555
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=91.84 E-value=0.96 Score=42.62 Aligned_cols=77 Identities=13% Similarity=0.051 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
..+|++++|+++|++++|||.+.+.... ......+.+.||+... +. ..+. ...++|+..+..+...+
T Consensus 72 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~------~~v~-~aC~s~~~al~~A~~~i 144 (345)
T 3s21_A 72 ATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMT------FDVA-NACLAFINGMDIAARML 144 (345)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEE------EECC-CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceE------EeEC-CcCHHHHHHHHHHHHHH
Confidence 4689999999999999999998754222 2345566788998632 21 1121 23445666777777778
Q ss_pred HhcCCceeEE
Q 015576 378 RHKKGKYGVG 387 (404)
Q Consensus 378 ~~~~~~~gl~ 387 (404)
+....++.|+
T Consensus 145 ~~g~~~~vLv 154 (345)
T 3s21_A 145 ERGEIDYALV 154 (345)
T ss_dssp HHTSCSEEEE
T ss_pred HCCCCCEEEE
Confidence 7766666553
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=91.63 E-value=0.7 Score=42.59 Aligned_cols=78 Identities=15% Similarity=0.057 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...+++++|+++|++++|||.+.+-.. .......+.+.||+...+. ..+ +...++++..+..+...++
T Consensus 54 ~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~~C~s~~~al~~A~~~i~ 126 (309)
T 2ebd_A 54 ATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYA------FDI-SAACSGFIYALDIADSFIK 126 (309)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCEE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCceE------Eec-CccchHHHHHHHHHHHHHH
Confidence 468999999999999999998875322 2224556678899865221 112 2335567778888888888
Q ss_pred hcCCceeEEe
Q 015576 379 HKKGKYGVGG 388 (404)
Q Consensus 379 ~~~~~~gl~~ 388 (404)
....++.|+.
T Consensus 127 ~g~~~~vlv~ 136 (309)
T 2ebd_A 127 SGKAKNVLVI 136 (309)
T ss_dssp TTSCSEEEEE
T ss_pred CCCCCEEEEE
Confidence 7766665533
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=91.45 E-value=0.62 Score=44.90 Aligned_cols=74 Identities=22% Similarity=0.155 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecc-----cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccch-HHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINE-----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS-GARILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd-----~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gas-G~~~l~~~~~~l 377 (404)
..+|++++|+++|++++|||.+.+-. ..+.....+.+.||+.. + ++.-..+|+ ++..+..+...+
T Consensus 121 a~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~~-~--------~~dv~~aC~g~~~aL~~A~~~i 191 (392)
T 3led_A 121 AVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLGG-F--------AFDMNVACSSATFGLKTAADFV 191 (392)
T ss_dssp HHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCCS-E--------EEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCCC-e--------EEEECCccHHHHHHHHHHHHHH
Confidence 36899999999999999999987532 22334556678899831 1 121123444 455677777777
Q ss_pred HhcCCceeE
Q 015576 378 RHKKGKYGV 386 (404)
Q Consensus 378 ~~~~~~~gl 386 (404)
+....++.|
T Consensus 192 ~~g~~~~vL 200 (392)
T 3led_A 192 GGGSVDAVL 200 (392)
T ss_dssp HTTSCSEEE
T ss_pred HCCCCCEEE
Confidence 766556555
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=91.06 E-value=0.76 Score=43.75 Aligned_cols=77 Identities=17% Similarity=0.134 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...|++++|+++|++++|||.+.+-.. .......+.+.||+... +.. ..+. ...++|+..+..+...++
T Consensus 84 a~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~-~~~----~~v~-~~C~s~~~Al~~A~~~i~ 157 (365)
T 3gwa_A 84 AYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTH-AGA----LDVN-LGCSGYVYGLSLAKGLVE 157 (365)
T ss_dssp HHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTT-SEE----EEEE-CSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCC-ceE----EEec-ccChHHHHHHHHHHHHHH
Confidence 378999999999999999999875321 23345567788998632 111 1121 223455667777777777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 158 ~g~~~~vL 165 (365)
T 3gwa_A 158 TGAARCVL 165 (365)
T ss_dssp TTSCSEEE
T ss_pred cCCCCEEE
Confidence 66555555
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=90.89 E-value=0.65 Score=45.08 Aligned_cols=75 Identities=19% Similarity=0.189 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecc----cchHHHHHHHHHhCCCCC--CcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd----~~~~~~~~~~e~lg~~~~--~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
.+|++++|+++|++++|||.+.+-. ........+.+.||+... .+.+ .+...++|+..+..+...++
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~v-------~~~~Cagg~~AL~~A~~~i~ 214 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPA-------TQWACVAGTRSLALAADLVA 214 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCTTCEEEEE-------SSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCCCceEEEe-------eCCccHHHHHHHHHHHHHHh
Confidence 6899999999999999999987532 233445677888998752 1221 13333455556666667777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 215 ag~~~~vL 222 (413)
T 3v7i_A 215 ADPDRVVL 222 (413)
T ss_dssp HCTTCEEE
T ss_pred cCCCCEEE
Confidence 66555544
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=90.71 E-value=0.76 Score=49.71 Aligned_cols=81 Identities=20% Similarity=0.153 Sum_probs=53.3
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
..|+++||+++|++++|||.+.+. ..+....-.+.+.||+....... ..+ +...++|+..+..+...++.+
T Consensus 694 ~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~----~~v-~~aCsg~~~Al~~A~~~i~sG 768 (979)
T 3tsy_A 694 KEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRV----MLY-HQGCYAGGTVLRTAKDLAENN 768 (979)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEE----EEE-SCCTTHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEE----eee-ccccHhHHHHHHHHHHHHHhC
Confidence 458999999999999999998753 22334455677889986533100 011 222445566777888888877
Q ss_pred CCceeEEeee
Q 015576 381 KGKYGVGGIC 390 (404)
Q Consensus 381 ~~~~gl~~~~ 390 (404)
..++.|+..+
T Consensus 769 ~~~~vLvvg~ 778 (979)
T 3tsy_A 769 AGARVLVVCS 778 (979)
T ss_dssp TTCEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 7777775443
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=90.60 E-value=1 Score=41.86 Aligned_cols=77 Identities=12% Similarity=-0.031 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...+++++|+++|++++|||.+.+-.. .....-.+.+.||+ ..+. ..+ ....++|+..+..+...++
T Consensus 54 a~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl-~~~~------~~v-~~aCas~~~al~~A~~~i~ 125 (322)
T 1ub7_A 54 AFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAFA------YDL-LAGCPGWIYALAQAHALVE 125 (322)
T ss_dssp HHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCEE------EEE-ECSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC-CCEE------Eee-CccchHHHHHHHHHHHHHH
Confidence 468899999999999999997764321 22245566778998 3221 112 2334567778888888888
Q ss_pred hcCCceeEEe
Q 015576 379 HKKGKYGVGG 388 (404)
Q Consensus 379 ~~~~~~gl~~ 388 (404)
....++.|+.
T Consensus 126 ~g~~~~vlv~ 135 (322)
T 1ub7_A 126 AGLAQKVLAV 135 (322)
T ss_dssp TTSCSEEEEE
T ss_pred cCCCCEEEEE
Confidence 7766666543
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=90.45 E-value=0.5 Score=44.51 Aligned_cols=90 Identities=12% Similarity=0.108 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCccee--------------eEcccCCcHHH-
Q 015576 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT--------------TINKVCSSGMK- 104 (404)
Q Consensus 40 l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~--------------~v~~aCas~~~- 104 (404)
.+.+++++.|+|+|++|+|+|.++.|-... .+......+...+|++....-. .=..+|+.+..
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivtgdL~q--~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v 285 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILTGDLSG--VGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVV 285 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEESCHH--HHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEecCChHH--HHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHH
Confidence 344566899999999999999999864422 1334566777788876422111 11234444433
Q ss_pred HHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 105 AVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 105 al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
--..-...++.|+.+++|++++-..-+
T Consensus 286 ~~~~~~~~~~~g~~~ril~~~tGalls 312 (347)
T 3lma_A 286 TFAHIFKEIEAGRLNRVLVVATGALLS 312 (347)
T ss_dssp HHHTHHHHHHTTSCSEEEEEEEEECCC
T ss_pred HHHHHHHHHhcCcccEEEEEecccccC
Confidence 334445678999999999998877544
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=90.15 E-value=1 Score=41.97 Aligned_cols=77 Identities=19% Similarity=0.078 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...+++++|+++|++++|||.+.+... .......+.+.||+...+. ..+ ....++++..+..+...++
T Consensus 65 a~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~aC~s~~~al~~A~~~i~ 137 (335)
T 1u6e_A 65 ATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILG------FDL-SAGAAGFGYALGAAADMIR 137 (335)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCTTSEE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCcE------eee-ccccHHHHHHHHHHHHHHH
Confidence 468999999999999999998875322 2234556677899852121 112 2335566778888888888
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
....++.|+
T Consensus 138 ~g~~~~vLv 146 (335)
T 1u6e_A 138 GGGAATMLV 146 (335)
T ss_dssp HTSCSSEEE
T ss_pred cCCCCEEEE
Confidence 776666553
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=89.69 E-value=0.89 Score=43.18 Aligned_cols=76 Identities=24% Similarity=0.131 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+|++++|+++|++++|||.+.+-.. .+.....+.+.||+...+. ..+ +...++++..+..+...++
T Consensus 78 a~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~------~~v-~~aC~s~~~Al~~A~~~i~ 150 (359)
T 3h78_A 78 MVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIPV------LDI-RAQASGLLYGLQMARGQIL 150 (359)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCSCCE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCcE------EEE-CCHhHHHHHHHHHHHHHHH
Confidence 478999999999999999999875422 2334566778899853221 112 1223445667777777777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 151 sG~~~~vL 158 (359)
T 3h78_A 151 AGLARHVL 158 (359)
T ss_dssp TTSCSEEE
T ss_pred CCCcCEEE
Confidence 65555554
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=88.95 E-value=1.2 Score=44.03 Aligned_cols=43 Identities=28% Similarity=0.116 Sum_probs=34.0
Q ss_pred HHHHHHHHHHcCCCCCCcceEeeccc----chHHHHHHHHHhCCCCC
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPE 347 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~----~~~~~~~~~e~lg~~~~ 347 (404)
.+|++++|+++|++++|||++.+..+ .+.....+.+.||+...
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~ 161 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDR 161 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCC
Confidence 67999999999999999999875432 34456677888999754
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=88.91 E-value=0.99 Score=43.35 Aligned_cols=77 Identities=22% Similarity=0.156 Sum_probs=49.3
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecc----cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd----~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
.+|++++|+++|++++|||++.+-. ..+.....+.+.||+........ .+ +...++|+..+..+...++..
T Consensus 101 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~----~~-~~~C~~~~~al~~A~~~i~sg 175 (387)
T 3oit_A 101 AEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTM----LH-LNGCFAGCAALRLAKDLAENS 175 (387)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEE----EE-CCGGGHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceee----EE-CchhHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999987532 23344566778899875421000 01 232334455666666777766
Q ss_pred CCceeE
Q 015576 381 KGKYGV 386 (404)
Q Consensus 381 ~~~~gl 386 (404)
..++.|
T Consensus 176 ~~~~vL 181 (387)
T 3oit_A 176 RGARVL 181 (387)
T ss_dssp TTCEEE
T ss_pred CCCEEE
Confidence 555554
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=88.89 E-value=1 Score=43.39 Aligned_cols=77 Identities=19% Similarity=0.109 Sum_probs=48.7
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecc----cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhc
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd----~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~ 380 (404)
.+|++++|+++|++++|||++.+-. ........+.+.||+........ .+ +...++++..+..+...++..
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~----~v-~~~C~g~~~al~~A~~~i~sg 181 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLM----IY-SQACHMGAAMLRIAKDLAENN 181 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEE----EE-SCCTTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceee----EE-cCccHHHHHHHHHHHHHHHcC
Confidence 6799999999999999999987532 23344566778899975431000 11 222334455666666666666
Q ss_pred CCceeE
Q 015576 381 KGKYGV 386 (404)
Q Consensus 381 ~~~~gl 386 (404)
..++.|
T Consensus 182 ~~~~vL 187 (393)
T 3ov2_A 182 RGARVL 187 (393)
T ss_dssp TTCEEE
T ss_pred CCCEEE
Confidence 555554
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=88.51 E-value=1.4 Score=43.31 Aligned_cols=95 Identities=16% Similarity=0.187 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecc-----cchHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINE-----AFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd-----~~~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
...|++++|+++|++++|||.+.+.. .+......+.+.||+... .+.. ..+. ...++|+..+..+...+
T Consensus 56 a~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~----~~v~-~aC~gg~~AL~~A~~~I 130 (450)
T 2f82_A 56 SFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEG----VDST-NACYGGTAALLNCVNWV 130 (450)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBC----CEEC-SGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceE----EEhh-hhhHHHHHHHHHHHHHH
Confidence 46899999999999999999998532 234445666777887211 1111 1221 22344566777777777
Q ss_pred HhcCC--ceeEEeee------------ccccceeeeEEEe
Q 015576 378 RHKKG--KYGVGGIC------------NGGGGASALVLEL 403 (404)
Q Consensus 378 ~~~~~--~~gl~~~~------------~~gG~~~a~ll~~ 403 (404)
+.... ++.|+..+ ..|-.+.|+||++
T Consensus 131 ~sg~~~~~~vLVvg~e~~~~~~~~~~~~fGDGA~A~ll~~ 170 (450)
T 2f82_A 131 ESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGP 170 (450)
T ss_dssp HSTTCCSCEEEEEEEEEECCSSSTTGGGCEEEEEEEEEES
T ss_pred HcCCCcCCeEEEEEeeeccccCCCCCcccccceEEEEecc
Confidence 76643 66664332 2333556777763
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=88.09 E-value=1.5 Score=40.46 Aligned_cols=77 Identities=21% Similarity=0.182 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...+++++|+++|++++|||.+.+-.. .....-.+.+.||+...|. ..+ ....++|+..+..+...++
T Consensus 55 ~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~aCas~~~al~~A~~~i~ 127 (317)
T 1hnj_A 55 GFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPA------FDV-AAACAGFTYALSVADQYVK 127 (317)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSCE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCeE------Eee-CcccHHHHHHHHHHHHHHH
Confidence 468999999999999999998764321 2234556677899863221 223 3445667778888888888
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
....++.|+
T Consensus 128 ~g~~~~vlv 136 (317)
T 1hnj_A 128 SGAVKYALV 136 (317)
T ss_dssp TTSCSEEEE
T ss_pred CCCCCEEEE
Confidence 776666553
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=87.46 E-value=1.2 Score=42.76 Aligned_cols=75 Identities=24% Similarity=0.181 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecc----cchHHHHHHHHHhCCCCCC--cCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd----~~~~~~~~~~e~lg~~~~~--vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
.+|++++|+++|++++|||++.+.. .+......+.+.||+.... ... + +...++++..+..+...++
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aC~s~~~al~~A~~~i~ 175 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMF------Y-HLGCYAGGTVLRLAKDIAE 175 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEE------E-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeee------E-ccccHHHHHHHHHHHHHHH
Confidence 6789999999999999999887532 2333456677889986431 111 1 1223455666777777777
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 176 ~g~~~~vL 183 (387)
T 3a5r_A 176 NNKGARVL 183 (387)
T ss_dssp HSTTCEEE
T ss_pred hCCCCEEE
Confidence 66555554
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=87.43 E-value=1.4 Score=40.53 Aligned_cols=77 Identities=22% Similarity=0.129 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...+++++|+++|++++|||.+.+... .......+.+.||+...+. ..+ +...++|+..+..+...++
T Consensus 55 ~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~aCas~~~al~~A~~~i~ 127 (313)
T 1zow_A 55 AYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVAS------MDQ-LAACSGFMYSMITAKQYVQ 127 (313)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCSCCE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcE------EEE-CCcCHHHHHHHHHHHHHHH
Confidence 468999999999999999998765322 1223556678899853221 122 2345667778888888888
Q ss_pred hcCCceeEE
Q 015576 379 HKKGKYGVG 387 (404)
Q Consensus 379 ~~~~~~gl~ 387 (404)
....++.|+
T Consensus 128 ~g~~~~vLv 136 (313)
T 1zow_A 128 SGDYHNILV 136 (313)
T ss_dssp TTSCSCEEE
T ss_pred CCCCCEEEE
Confidence 776666553
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=87.26 E-value=1.8 Score=41.39 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCcceEeeccc----chHHHHHHHHHhCCCCC-C-cCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPE-Q-VNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~----~~~~~~~~~e~lg~~~~-~-vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+++++|+++|++++|||.+.+... +......+.+.||+... + +. +.....++|+..+..+...++
T Consensus 89 ~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~-------v~~~aCss~~~Al~~A~~~i~ 161 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIP-------IAQLGCAAGGAAINRAHDFCT 161 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEE-------ECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEE-------ccCCcCHHHHHHHHHHHHHHH
Confidence 67899999999999999999875322 23345566788998642 1 22 112334456777888888888
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 162 ~g~~~~vL 169 (382)
T 1u0m_A 162 AYPEANAL 169 (382)
T ss_dssp HSTTCEEE
T ss_pred cCCCCEEE
Confidence 77656554
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=87.24 E-value=1.8 Score=41.50 Aligned_cols=77 Identities=21% Similarity=0.222 Sum_probs=54.2
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
.++++++|+++|++++|||.+.+-... ......+...+|++.. |. .. =+...++++..+..+...++
T Consensus 34 ~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~------~~-v~~~Css~~~al~~A~~~I~ 106 (395)
T 4e1l_A 34 TIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPS------YT-VNKLCGSGLKSVQLAAQSIT 106 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCE------EE-ECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceE------EE-ccccchHHHHHHHHHHHHHh
Confidence 689999999999999999988764221 2234456677898532 21 11 13456678888999999999
Q ss_pred hcCCceeEEe
Q 015576 379 HKKGKYGVGG 388 (404)
Q Consensus 379 ~~~~~~gl~~ 388 (404)
....+..|+.
T Consensus 107 ~G~~~~vlv~ 116 (395)
T 4e1l_A 107 SGENDVVIAG 116 (395)
T ss_dssp TTSCSEEEEE
T ss_pred CCCCCEEEEE
Confidence 8777777654
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=86.80 E-value=1.2 Score=43.12 Aligned_cols=76 Identities=22% Similarity=0.232 Sum_probs=49.1
Q ss_pred HHHHHHHHHHcCCCCCCcceEeeccc----chHHHHHHHHHhCCCCCCcC-CCCCccccCCcccchHHHHHHHHHHHHHh
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQVN-AHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~----~~~~~~~~~e~lg~~~~~vn-~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~ 379 (404)
..|++++|+++|++++|||.+.+-.. +......+.+.||+... +. .. .+ +...++|+..+..+...++.
T Consensus 130 ~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~-~~~~~----~v-~~aCas~~~AL~~A~~~i~~ 203 (413)
T 1xes_A 130 KEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPS-VKRVG----VF-QHGCFAGGTVLRMAKDLAEN 203 (413)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTT-CEEEE----EE-SCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCc-cchhc----ee-cCccHHHHHHHHHHHHHHHc
Confidence 67899999999999999998875322 33345567788998643 10 10 11 22233556667777777776
Q ss_pred cCCceeE
Q 015576 380 KKGKYGV 386 (404)
Q Consensus 380 ~~~~~gl 386 (404)
...++.|
T Consensus 204 G~~~~vL 210 (413)
T 1xes_A 204 NRGARVL 210 (413)
T ss_dssp STTCCEE
T ss_pred CCCCEEE
Confidence 6555554
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=86.36 E-value=1.7 Score=41.21 Aligned_cols=75 Identities=11% Similarity=0.030 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc------chHHHHHHHHHhCCCCCCcCCCCCccccCCcccc-hHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA------FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC-SGARILVTLLGV 376 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~------~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~ga-sG~~~l~~~~~~ 376 (404)
..+|++++|+++|++++|||.+.+-.. +......+.+.||+...+. ..+ ..++ +|+..+..+...
T Consensus 58 a~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~~------~~v--~~aC~~~~~al~~A~~~ 129 (357)
T 3s3l_A 58 AARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVPA------FGL--AQRCNGGMGAIELAGAY 129 (357)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSSSCE------EEE--ECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCCCcE------EEE--cCccHHHHHHHHHHHHH
Confidence 478999999999999999999875433 1123455677889842221 112 2334 445567677777
Q ss_pred HHhcCCc--eeE
Q 015576 377 LRHKKGK--YGV 386 (404)
Q Consensus 377 l~~~~~~--~gl 386 (404)
++....+ +.|
T Consensus 130 i~sg~~~~~~vL 141 (357)
T 3s3l_A 130 LGSGIGAGHAAL 141 (357)
T ss_dssp HHTTSSSSSEEE
T ss_pred HHcCCCCCCEEE
Confidence 7766555 555
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.35 E-value=1.5 Score=43.30 Aligned_cols=93 Identities=16% Similarity=0.247 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCC-CCcCCCCCccccCCcccch-HHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCS-GARILVTLLGV 376 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gas-G~~~l~~~~~~ 376 (404)
...|++++|+++|++++|||++.+... .......+.+.|+... ..+.. ..+ ..+|+ |+..+..+...
T Consensus 77 a~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~~~~~----~dv--~~aC~gg~~AL~~A~~~ 150 (478)
T 2p8u_A 77 CMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEG----IDT--TNACYGGTAAVFNAVNW 150 (478)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCCBC----CEE--ESGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCCCceE----EEE--cchhHHHHHHHHHHHHH
Confidence 478999999999999999999985422 3333444454444321 11211 112 22344 45566666677
Q ss_pred HHhcC--CceeEEee------------eccccceeeeEEE
Q 015576 377 LRHKK--GKYGVGGI------------CNGGGGASALVLE 402 (404)
Q Consensus 377 l~~~~--~~~gl~~~------------~~~gG~~~a~ll~ 402 (404)
++... .++.|+.. ..+|..++|+||+
T Consensus 151 i~sg~~~~~~aLVV~~Eia~~~~~~~~~~fGdGA~A~Ll~ 190 (478)
T 2p8u_A 151 IESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIG 190 (478)
T ss_dssp HTSTTCCSCEEEEEEEEEECCCSSTTGGGCEEEEEEEEEE
T ss_pred HHcCCccCCEEEEEEeeeecccCCCCCCcccceeEEEEEe
Confidence 77666 66766443 2233456777776
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=86.19 E-value=2.5 Score=40.64 Aligned_cols=77 Identities=17% Similarity=0.132 Sum_probs=54.6
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
.++++++|+++|++++|||.+.+.... ......+...+|++.. |. ..+ +...++++..+..+...++
T Consensus 36 ~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~------~~v-~~aCss~~~al~~A~~~I~ 108 (396)
T 4dd5_A 36 VTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPA------MTI-NIVCGSGLRSVSMASQLIA 108 (396)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceE------EEe-ccccHHHHHHHHHHHHHHh
Confidence 689999999999999999998764321 2334556778898632 21 112 3446677888889999999
Q ss_pred hcCCceeEEe
Q 015576 379 HKKGKYGVGG 388 (404)
Q Consensus 379 ~~~~~~gl~~ 388 (404)
....+..|+.
T Consensus 109 ~G~~~~vLv~ 118 (396)
T 4dd5_A 109 LGDADIMLVG 118 (396)
T ss_dssp HTSCSEEEEE
T ss_pred cCCCCEEEEE
Confidence 8777777654
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=85.86 E-value=1.9 Score=40.91 Aligned_cols=76 Identities=20% Similarity=0.117 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecc----cchHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHHHHh
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd----~~~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~ 379 (404)
..|++++|+++|++++|||.+.+-. ........+.+.||+... +. ..+.....++++..+..+...++.
T Consensus 100 ~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~------~~v~~~aCss~~~al~~A~~~i~~ 173 (374)
T 2h84_A 100 QQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVER------VSLNLMGCLAGLSSLRTAASLAKA 173 (374)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEE------EEEESCGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCce------EEecCCcCHHHHHHHHHHHHHHHc
Confidence 6789999999999999999987432 223344566788998642 11 111112344556677788888887
Q ss_pred cCCceeE
Q 015576 380 KKGKYGV 386 (404)
Q Consensus 380 ~~~~~gl 386 (404)
...++.|
T Consensus 174 g~~~~vL 180 (374)
T 2h84_A 174 SPRNRIL 180 (374)
T ss_dssp CTTCEEE
T ss_pred CCCCEEE
Confidence 6655554
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=85.66 E-value=1.5 Score=40.83 Aligned_cols=82 Identities=18% Similarity=0.133 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeE----cccCCcHHHHHHHHHHHHH
Q 015576 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI----NKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 39 ~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v----~~aCas~~~al~~A~~~I~ 114 (404)
+...++++++|+++|++++|||.++.-. .+...-..+...+|++......++ +..++|...+|..+ ++
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~-----~~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~ 295 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQ-----ANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---LR 295 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-----CCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---HH
Confidence 4567889999999999999999876611 122344567788898642222111 23444444455444 44
Q ss_pred cCC---CCeEEEecccc
Q 015576 115 LGI---NDIVVAGGMES 128 (404)
Q Consensus 115 aG~---~~~vLv~g~e~ 128 (404)
.|+ -|.+|+.++-.
T Consensus 296 ~~~~~~G~~vll~~~G~ 312 (331)
T 2x3e_A 296 QGILRDGGNMVLTGFGA 312 (331)
T ss_dssp TTCSCTTCEEEEEEEET
T ss_pred hCCCCCCCEEEEEEEeH
Confidence 443 36888876664
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.48 E-value=4.4 Score=39.17 Aligned_cols=77 Identities=14% Similarity=0.228 Sum_probs=52.0
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCC-CCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..+++++|+++|++++|||.+.+-... ..........+|++. -|. ..+ +...+||+..+..+...++
T Consensus 60 ~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p~------~~v-~~aCss~~~Al~~A~~~I~ 132 (418)
T 2iik_A 60 SAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPL------STV-NRQCSSGLQAVASIAGGIR 132 (418)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCceE------EEe-CCCCHHHHHHHHHHHHHHH
Confidence 688999999999999999987754322 122333446688842 121 112 3446678888999999999
Q ss_pred hcCCceeEEe
Q 015576 379 HKKGKYGVGG 388 (404)
Q Consensus 379 ~~~~~~gl~~ 388 (404)
....+..|+.
T Consensus 133 ~G~~d~vLv~ 142 (418)
T 2iik_A 133 NGSYDIGMAC 142 (418)
T ss_dssp TTSCSEEEEE
T ss_pred CCCCCEEEEe
Confidence 8777766654
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=85.47 E-value=1.5 Score=42.07 Aligned_cols=75 Identities=20% Similarity=0.140 Sum_probs=50.7
Q ss_pred HHHHHHHHHHcCCCCCCcceEeeccc----chHHHHHHHHHhCCCCCC--cCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~----~~~~~~~~~e~lg~~~~~--vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
..|++++|+++|++++|||.+.+-.. .......+.+.||+.... +.+ .....++|+..+..+...++
T Consensus 118 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v-------~~~aCas~~~Al~~A~~~i~ 190 (393)
T 1ted_A 118 VDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVV-------NFMGCAAAMNALGTATNYVR 190 (393)
T ss_dssp HHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEE-------ESCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEe-------ccchhHHHHHHHHHHHHHHH
Confidence 57899999999999999999874322 333455667889986431 121 12334556777888888888
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 191 ~G~~~~vL 198 (393)
T 1ted_A 191 AHPAMKAL 198 (393)
T ss_dssp HSTTCEEE
T ss_pred cCCCCEEE
Confidence 76655554
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=85.44 E-value=1.8 Score=40.50 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeeccc-----chHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~-----~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
...+++++|+++|++++|||.+.+-.. .....-.+.+.||+...+. ..+ ....++++..+..+...++
T Consensus 64 a~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~~~~------~~v-~~aCas~~~Al~~A~~~i~ 136 (339)
T 1mzj_A 64 GVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAGG------FDL-SAACAGFCHALSIAADAVE 136 (339)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCEE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCCccE------EEc-cccchHHHHHHHHHHHHHH
Confidence 468999999999999999997764321 2224456677899863221 112 2334566778888888888
Q ss_pred hcCCceeE
Q 015576 379 HKKGKYGV 386 (404)
Q Consensus 379 ~~~~~~gl 386 (404)
....++.|
T Consensus 137 ~G~~~~vL 144 (339)
T 1mzj_A 137 SGGSRHVL 144 (339)
T ss_dssp HSSCSCEE
T ss_pred CCCCCEEE
Confidence 77666555
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=84.31 E-value=2.3 Score=40.75 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=53.6
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccc-----hHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~-----~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~ 378 (404)
.++++++|+++|++++|||.+.+.... ......+...+|++.. |.. . =+...++++..+..+...++
T Consensus 34 ~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~------~-v~~aCss~~~al~~A~~~I~ 106 (394)
T 3ss6_A 34 VPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGY------T-IQRQCSSGMQAIMSAAMQIQ 106 (394)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEE------E-EECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEE------E-ecCcchHHHHHHHHHHHHHh
Confidence 689999999999999999998754322 2234455677898632 211 1 13445677888888999999
Q ss_pred hcCCceeEEe
Q 015576 379 HKKGKYGVGG 388 (404)
Q Consensus 379 ~~~~~~gl~~ 388 (404)
....+..|+.
T Consensus 107 ~G~~~~vlv~ 116 (394)
T 3ss6_A 107 LGVSEVVVAG 116 (394)
T ss_dssp HTSCSEEEEE
T ss_pred CCCCCEEEEE
Confidence 8777777654
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.18 E-value=2.7 Score=41.22 Aligned_cols=73 Identities=10% Similarity=0.122 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeec-----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~h-----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l 377 (404)
...|++++|+++|++++|||++.+- +.+....-.+.+.||+...+ +. .++--..+|+|.. .+..+...+
T Consensus 58 a~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~-~~----~a~D~~~aC~g~~~al~~A~~~i 132 (460)
T 2wya_A 58 CLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNT-DI----EGIDTTNACYGGTASLFNAANWM 132 (460)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCC-CC----BCCEEESGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCC-Ce----eEechhhhhhhHHHHHHHHHHHH
Confidence 3789999999999999999998752 34444555556667653211 11 1222334666655 555565666
Q ss_pred HhcC
Q 015576 378 RHKK 381 (404)
Q Consensus 378 ~~~~ 381 (404)
+...
T Consensus 133 ~~g~ 136 (460)
T 2wya_A 133 ESSS 136 (460)
T ss_dssp TSTT
T ss_pred Hhcc
Confidence 6543
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=80.20 E-value=5.5 Score=38.02 Aligned_cols=77 Identities=14% Similarity=0.048 Sum_probs=52.6
Q ss_pred HHHHHHHHHHc-CCCCCCcceEeeccc------chHHHHHHHHHhCCCCC-CcCCCCCccccCCcccchHHHHHHHHHHH
Q 015576 305 SLAIPKAIANA-GLEASQIDYYEINEA------FSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (404)
Q Consensus 305 ~~a~~~al~~a-gl~~~dId~~~~hd~------~~~~~~~~~e~lg~~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~ 376 (404)
.++++++|+++ |++++|||.+.+... .......+...+|++.. |. .. =+...++++..+..+...
T Consensus 32 ~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~------~~-v~~aCss~l~Al~~A~~~ 104 (387)
T 3goa_A 32 AHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPA------VT-VNRLCGSSMQALHDAARM 104 (387)
T ss_dssp HHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCC------EE-EECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcE------eE-ecCcchHHHHHHHHHHHH
Confidence 68999999999 999999998875321 22334445566888532 21 11 134456788888899999
Q ss_pred HHhcCCceeEEe
Q 015576 377 LRHKKGKYGVGG 388 (404)
Q Consensus 377 l~~~~~~~gl~~ 388 (404)
++....+..|+.
T Consensus 105 I~sG~~d~vLv~ 116 (387)
T 3goa_A 105 IMTGDAQVCLVG 116 (387)
T ss_dssp HHTTSCSEEEEE
T ss_pred HhCCCCCEEEEE
Confidence 997777776654
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=80.10 E-value=15 Score=35.11 Aligned_cols=76 Identities=9% Similarity=0.031 Sum_probs=49.0
Q ss_pred HHHHHHHHHHcCCCCCCcc----eEeecccc------------------------h-------HHHHHHHHHhCCCCCCc
Q 015576 305 SLAIPKAIANAGLEASQID----YYEINEAF------------------------S-------VVAIANQKLLGLDPEQV 349 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId----~~~~hd~~------------------------~-------~~~~~~~e~lg~~~~~v 349 (404)
..+++++|+.+|++++||| .+.+-... . ...-.+...||+..+.+
T Consensus 79 l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~ 158 (413)
T 3o04_A 79 IASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINS 158 (413)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcce
Confidence 5789999999999999998 55432211 0 01223455667644222
Q ss_pred CCCCCccccCCcccchHHHHHHHHHHHHHhcCCceeEEe
Q 015576 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (404)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~ 388 (404)
.+ .+..+|++..+..+...|+....+..|+.
T Consensus 159 ~v--------~~aCss~~~Al~~A~~~I~~G~~d~~lvg 189 (413)
T 3o04_A 159 TT--------VTACATATNSIGDAFKVIERGDADAMITG 189 (413)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred ee--------cchhHHHHHHHHHHHHHHHcCCCCEEEEe
Confidence 22 23456788889999999998766666654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 404 | ||||
| d1m3ka1 | 268 | c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea | 6e-78 | |
| d1ulqa1 | 273 | c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T | 4e-65 | |
| d1afwa1 | 269 | c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch | 2e-47 | |
| d1wdkc1 | 262 | c.95.1.1 (C:2-263) Fatty oxidation complex beta su | 9e-46 | |
| d1m3ka2 | 124 | c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo | 2e-36 | |
| d1afwa2 | 124 | c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc | 4e-31 | |
| d1ulqa2 | 125 | c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase | 2e-30 | |
| d1wdkc2 | 128 | c.95.1.1 (C:264-391) Fatty oxidation complex beta | 2e-27 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 0.002 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 239 bits (612), Expect = 6e-78
Identities = 113/269 (42%), Positives = 156/269 (57%), Gaps = 4/269 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ I ART +G F G+ ++ A +LG+ I L+RA V V EV G VL A
Sbjct: 3 PSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE 62
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAA+ AG+P +N++ SG++AV L Q I G I+VAGGMESMS A
Sbjct: 63 GQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P + A R G ++G ++D M+KDGL D + + MG AE A + ++RDEQD++A+
Sbjct: 123 P-HCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGG 251
S + AAQ G F EI P + +G I VD DE + + KLRP+F + G
Sbjct: 182 SQNKAEAAQKDGRFKDEIVPFIVKGRKGD--ITVDADEYIRHGATLDSMAKLRPAFDKEG 239
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELG 280
+VTAGNAS ++DGAAA +L+S +A G
Sbjct: 240 TVTAGNASGLNDGAAAALLMSEAEASRRG 268
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 207 bits (527), Expect = 4e-65
Identities = 98/275 (35%), Positives = 148/275 (53%), Gaps = 9/275 (3%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+ IV RTP+G G+L+SV L + A+ + R+ V V++V+ G A
Sbjct: 1 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGED 60
Query: 74 QA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
AR A L AG P V T+N++C SG++AV AA++I G + + G+ESMS A
Sbjct: 61 NRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRA 120
Query: 133 PKYLAEARKGSRLGHDTIVDG-----MLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
P + + +G G+ + D + + +Y MG AE A + I R+EQD
Sbjct: 121 PYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQD 180
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKF-DAAKLMKLRPS 246
+A+ S ++ + A G F E+ PV + G+ I+V++DEG + KL LRP
Sbjct: 181 RFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKE--EILVEQDEGPRRDTSLEKLAALRPV 238
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGL 281
F+EGG+VTAGN+S ++DGAAA++LVS A GL
Sbjct: 239 FREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 161 bits (407), Expect = 2e-47
Identities = 90/273 (32%), Positives = 129/273 (47%), Gaps = 20/273 (7%)
Query: 11 KARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRA----NVKPLLVQEVFFG 65
+ DV IV R+ +G GF G+ V+ L + + R L++EV G
Sbjct: 8 RPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACG 67
Query: 66 NVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
NVL+ G R A L +GIP S +N+ CSSG+ AV A I++G DI +A G
Sbjct: 68 NVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALG 127
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+ESM+N K + I L+ MG+ E A I+R +
Sbjct: 128 VESMTNNYKNVNP--------LGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKD 179
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLR 244
QD +A S+++ A+N GLF EI P+++ G I DEG A L +R
Sbjct: 180 QDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGS-----ICQSDEGPRPNVTAESLSSIR 234
Query: 245 PSF-KEGGSVTAGNASIISDGAAALVLVSGVKA 276
P+F K+ G+ TAGNAS +SDG A ++L A
Sbjct: 235 PAFIKDRGTTTAGNASQVSDGVAGVLLARRSVA 267
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 156 bits (395), Expect = 9e-46
Identities = 84/275 (30%), Positives = 132/275 (48%), Gaps = 17/275 (6%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSS-VSATKLGSIAIECALKR-ANVKPLLVQEV-FFG 65
S+ RDV IV RTPMG G + A + + I L+R + V P V++V +
Sbjct: 1 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGC 60
Query: 66 NVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
+ G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG
Sbjct: 61 VNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGG 120
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+E M + VD L+ MG+ AE+ H I+R++
Sbjct: 121 VEHMGHVS-------------MMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQ 167
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245
QD++A+RS + A G F EI P++ G I + L L+P
Sbjct: 168 QDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKP 227
Query: 246 SFK-EGGSVTAGNASIISDGAAALVLVSGVKALEL 279
+F +GG+VTAG +S I+DGA+ ++++S +A +L
Sbjct: 228 AFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDL 262
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 127 bits (320), Expect = 2e-36
Identities = 49/122 (40%), Positives = 71/122 (58%)
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK 340
+Q + +I +A P+ T P A KA+ AG + +D E NEAF+ A A K
Sbjct: 1 IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNK 60
Query: 341 LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400
LG DP VN +GGA+++GHP+G SGARIL TLL ++ + + G+ +C GGG A+
Sbjct: 61 DLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMC 120
Query: 401 LE 402
+E
Sbjct: 121 IE 122
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 113 bits (283), Expect = 4e-31
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 279 LGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIAN 338
L L V+ + F PE P+ AIPK + GL+ ID +EINEAF+ A+
Sbjct: 1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYC 60
Query: 339 QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASA 398
LG+D +VN GGA++LGHPLGC+GAR + T+L L+ K + GV +C G G +A
Sbjct: 61 IHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELK--KDQIGVVSMCIGTGMGAA 118
Query: 399 LVLE 402
+
Sbjct: 119 AIFI 122
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 111 bits (279), Expect = 2e-30
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Query: 284 IAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK--L 341
+A++R A A P P A KA+ AGL S + E+NEAF+ A+A +
Sbjct: 3 LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWS 62
Query: 342 LGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401
L ++ +++N +GGA++LGHPLG SGARIL TL+ +R +K ++G+ +C G G A+V+
Sbjct: 63 LSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVV 122
Query: 402 ELM 404
E M
Sbjct: 123 EGM 125
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 103 bits (258), Expect = 2e-27
Identities = 55/126 (43%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 280 GLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA-- 337
GL+ +A IR A A P P A KA+ AGL + ID+ E+NEAF+ A+
Sbjct: 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVL 60
Query: 338 -NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGA 396
+ K+L E+VN HGGA++LGHP GCSGARI TLL V++ G +G+ +C G G
Sbjct: 61 KDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQG 120
Query: 397 SALVLE 402
A V E
Sbjct: 121 IATVFE 126
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 37.4 bits (85), Expect = 0.002
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 99 CSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKG 142
+ G+ A+ A ++I+ G +VV+GG++S + ++++ G
Sbjct: 160 QAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASG 202
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 404 | |||
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 100.0 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 100.0 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 100.0 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.96 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.95 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.95 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.95 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.91 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.75 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.74 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.73 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.73 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.72 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.7 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.65 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.64 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.57 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.57 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.53 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.51 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.49 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.4 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.39 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 99.39 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.37 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.36 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.34 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.27 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.06 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.01 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.98 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 98.94 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 98.87 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 98.79 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 98.65 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 98.42 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 98.3 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.24 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 98.17 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 95.89 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 95.17 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 94.95 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 94.78 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 94.42 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 93.9 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 93.79 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 93.19 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 92.68 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 92.47 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 92.18 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 90.76 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 81.9 | |
| d1okja1 | 106 | Hypothetical protein YeaZ {Escherichia coli [TaxId | 80.06 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=100.00 E-value=1.8e-45 Score=340.25 Aligned_cols=265 Identities=42% Similarity=0.622 Sum_probs=244.7
Q ss_pred CceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcce
Q 015576 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 13 ~~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++||||++.||||+++.+.+++.++.+|+..+++.+|+++|++|++||.+++|+..+...+++++++++...|++..+|+
T Consensus 3 ~~V~Iv~~~RTP~g~~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vpa 82 (268)
T d1m3ka1 3 PSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATA 82 (268)
T ss_dssp CCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEE
T ss_pred CCEEEEeceeCcccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCcccccc
Confidence 57999999999999999999999999999999999999999999999999999999878899999999999999988999
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHH
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (404)
++|++.|+||+.++..|++.|++|.+|++|++|+|+||+.|.... .+.+...+.....+.+..+++.+++....|+..|
T Consensus 83 ~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~-~~~~~~~~~~~~~~~~~~~~l~d~~~~~~Mg~~A 161 (268)
T d1m3ka1 83 WGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAH-LRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTA 161 (268)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEEC-CSSCCSSSCEEEEEHHHHHHTBCTTTCSBHHHHH
T ss_pred eeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhh-cccCCcCCCcccccccccccCcCcccCCcHHHHH
Confidence 999999999999999999999999999999999999999886543 3444555555556666677888888889999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCCcCCCC
Q 015576 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (404)
Q Consensus 173 ~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~g 251 (404)
+++.++|||+||++|+|++++|+++..+..+++|+.+++|+.++...+.. .+++|+.+|+ .+.|.|..++|+|+++|
T Consensus 162 e~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~~g~~--~v~~d~~~r~~tt~e~L~~L~p~f~~~G 239 (268)
T d1m3ka1 162 ENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDI--TVDADEYIRHGATLDSMAKLRPAFDKEG 239 (268)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCE--EECSCSSCCTTCCHHHHHTCCBSSCTTC
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCCCCCCe--EEeCCCCCCCCCCHHHHcCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999987777653 5899999999 99999999999999999
Q ss_pred ccccCCCCccccccceeeecCHHHHHHcC
Q 015576 252 SVTAGNASIISDGAAALVLVSGVKALELG 280 (404)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~~~~~a~~~~ 280 (404)
.+|.+++|+++|||+|+||++++.++++|
T Consensus 240 tvTagnss~~~DGAAa~ll~se~~a~~~G 268 (268)
T d1m3ka1 240 TVTAGNASGLNDGAAAALLMSEAEASRRG 268 (268)
T ss_dssp CCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred cEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999999875
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.3e-44 Score=336.29 Aligned_cols=266 Identities=37% Similarity=0.524 Sum_probs=239.1
Q ss_pred ceEEEeeccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCCCCCCcce
Q 015576 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVVC 92 (404)
Q Consensus 14 ~v~ivg~~~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lGl~~~~~~ 92 (404)
++|||+..||||+++.+.+++.++.+|+..+++.+|+++++++++||.+++|++.+.. .+.+++++++...|+|..+|+
T Consensus 1 ~a~Iv~~~RTPfgk~~G~l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~ 80 (273)
T d1ulqa1 1 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAG 80 (273)
T ss_dssp CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEE
T ss_pred CEEEEccccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccce
Confidence 5899999999999999999999999999999999999999999999999999998865 567899999999999888999
Q ss_pred eeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccc-----ccccccccc
Q 015576 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDG-----LWDVYNDFG 167 (404)
Q Consensus 93 ~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 167 (404)
++|++.|+||+.++..|++.|++|.+|++|++|+|+||+.|....+.+++...+.....+...... +.+++....
T Consensus 81 ~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
T d1ulqa1 81 CTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTES 160 (273)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCC
T ss_pred EEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhccccccccccCCCcccccccccccccchhhhccccccc
Confidence 999999999999999999999999999999999999999998877767776666554444433222 223445678
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCCCC
Q 015576 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (404)
Q Consensus 168 ~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~~~ 246 (404)
|+..|++++++||+|||++|+|++++|+++..+.+++.|..+++|+.++..+.. +.+++|+.+|+ .|.|+|.+++|+
T Consensus 161 m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~~~~~~--~~v~~d~~~r~~tt~e~La~L~p~ 238 (273)
T d1ulqa1 161 MGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGPRRDTSLEKLAALRPV 238 (273)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHHSCBS
T ss_pred hHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeeccccccCc--eEEeCCCCcCCCCCHHHHccCCCC
Confidence 999999999999999999999999999999999999999999999987665543 45889999999 999999999999
Q ss_pred cCCCCccccCCCCccccccceeeecCHHHHHHcCC
Q 015576 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGL 281 (404)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~ 281 (404)
|.++|.+|.++||+++|||+|+||++++.++++|+
T Consensus 239 f~~~G~vTagnss~~sDGAAa~vl~se~~a~~lGL 273 (273)
T d1ulqa1 239 FREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273 (273)
T ss_dssp SSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred cCCCCcEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence 99999999999999999999999999999999873
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1.6e-43 Score=325.89 Aligned_cols=257 Identities=34% Similarity=0.488 Sum_probs=230.4
Q ss_pred CCCCCceEEEeeccCccccCC-CCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeccCCC-CCCcHHHHHHHHCC
Q 015576 9 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAG 85 (404)
Q Consensus 9 ~~~~~~v~ivg~~~t~~~~~~-~~~~~~~~~~l~~~A~~~AL~~-agi~~~~id~li~g~~~~~~-~~~~~a~~i~~~lG 85 (404)
|.++++|||||+.||||++.. +.+++.++.+|+..+++++|++ +|+++++||.+++|++.+.. .+++.+++++...|
T Consensus 1 ~~n~r~v~Iv~a~RTP~g~~~gg~~~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag 80 (262)
T d1wdkc1 1 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQ 80 (262)
T ss_dssp CCCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSS
T ss_pred CCCCCcEEEEeeeeCceeCCCCccccCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhh
Confidence 356789999999999999864 5688999999999999999996 89999999999999998864 68899999999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
++...|+++|++.|+||+.++..|++.|++|.+|++|++|+|+||+.|..... +......+.+++..
T Consensus 81 ~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~-------------~~~~~~~~~~~~~~ 147 (262)
T d1wdkc1 81 IPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV-------------DPNPHMSLYAAKAS 147 (262)
T ss_dssp SCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB-------------CCCGGGGGTSCGGG
T ss_pred cccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeecccccccccccccc-------------cccccccccccccc
Confidence 99899999999999999999999999999999999999999999998754321 11222334455556
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLR 244 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~ 244 (404)
..|++.++++.++||++|+++|+|++.+++++.++...++|+.||+|++++..++.+ ..++.||.+|+ +|+|+|.+++
T Consensus 148 ~~mg~tae~~a~~~gisRe~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~~~-~~~~~De~~R~~tt~E~La~Lk 226 (262)
T d1wdkc1 148 GMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFL-KIFDYDETIRPDTTLESLAALK 226 (262)
T ss_dssp GSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCE-EEECSCTTCCTTCCHHHHHTSC
T ss_pred cchhhhHHHHHHHhccccccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccccc-cccccccCCCCCCCHHHHcCCC
Confidence 789999999999999999999999999999999999999999999999998887765 35789999998 9999999999
Q ss_pred CCcCC-CCccccCCCCccccccceeeecCHHHHHHc
Q 015576 245 PSFKE-GGSVTAGNASIISDGAAALVLVSGVKALEL 279 (404)
Q Consensus 245 ~~~~~-~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~ 279 (404)
|+|++ +|.+|.+++++++|||+|+||++++.++++
T Consensus 227 P~f~~~~GtvTagnsS~isDGAAavll~se~~akeL 262 (262)
T d1wdkc1 227 PAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDL 262 (262)
T ss_dssp CSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHT
T ss_pred CcccCCCCcCcchhhChHHHHHHHHHHhCHHHHhcC
Confidence 99974 799999999999999999999999999875
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5e-42 Score=316.75 Aligned_cols=255 Identities=34% Similarity=0.468 Sum_probs=221.8
Q ss_pred CCCceEEEeeccCcccc-CCCCCCCCCHHHHHHHHHHHHHHHc----CCCCCccCeEEEEeccCCCCCCcHHHHHHHHCC
Q 015576 11 KARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKRA----NVKPLLVQEVFFGNVLSANLGQAPARQAALGAG 85 (404)
Q Consensus 11 ~~~~v~ivg~~~t~~~~-~~~~~~~~~~~~l~~~A~~~AL~~a----gi~~~~id~li~g~~~~~~~~~~~a~~i~~~lG 85 (404)
++++||||++.||||+| +.+.+++.++.+|+..+++++|+++ +++|++||.+++|++.+...+.+++++++...|
T Consensus 8 ~~~dvvIv~a~RTP~gr~~~G~l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al~ag 87 (269)
T d1afwa1 8 RPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASG 87 (269)
T ss_dssp CTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTT
T ss_pred CCCCEEEEcceeCcceeCCCCCCCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhhhcc
Confidence 36789999999999998 5789999999999999999999864 699999999999999887777889999999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCchhhhhhhcCCCCCCcccccccccccccccccc
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (404)
++...|+++|+..|+||+.++..|++.|++|.+|++|++|+|+||+.|........+ ........+..++..
T Consensus 88 lp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~~~~~--------~~~~~~~~~~~~~~~ 159 (269)
T d1afwa1 88 IPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMI--------SSEELQKNREAKKCL 159 (269)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSC--------CCHHHHHCTTGGGGG
T ss_pred ccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccccccccccccccc--------ccchhcccccccccc
Confidence 998999999999999999999999999999999999999999999876543221100 011112223344455
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhCCcccccceeeeecCCCCCCceeeccCCcccc-CCHHHHhcCC
Q 015576 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLR 244 (404)
Q Consensus 166 ~~~~~~a~~~~~~yg~~~~~~a~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~-~~~~~~~~~~ 244 (404)
..|+..|++++++||++|+++|+|++.+|+++..+...++|.++|+|++++.. .+++.||.+|+ +|+|+|.+++
T Consensus 160 ~~Mg~tAe~~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~~-----~~~~~De~~R~~tt~E~La~L~ 234 (269)
T d1afwa1 160 IPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDG-----SICQSDEGPRPNVTAESLSSIR 234 (269)
T ss_dssp SCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTS-----CEECSCSSCCSCCCHHHHHHCC
T ss_pred cccccccccchhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceecccc-----cEEecCCCcCCCCCHHHHcCCC
Confidence 78999999999999999999999999999999999999999999999987644 24899999998 9999999999
Q ss_pred CCcCC-CCccccCCCCccccccceeeecCHHHHHH
Q 015576 245 PSFKE-GGSVTAGNASIISDGAAALVLVSGVKALE 278 (404)
Q Consensus 245 ~~~~~-~g~~~~~~~~~~~DGAaA~vL~~~~~a~~ 278 (404)
|+|.+ +|.+|.+++|+++|||+|+||++++.|++
T Consensus 235 P~f~~~~G~vTagnsS~~sDGAAavll~se~~A~e 269 (269)
T d1afwa1 235 PAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269 (269)
T ss_dssp BSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHH
T ss_pred CccCCCCCeEcchhcChHHHHHHHHHHhhHHHhcC
Confidence 99965 59999999999999999999999999875
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.96 E-value=6.8e-29 Score=197.61 Aligned_cols=123 Identities=40% Similarity=0.639 Sum_probs=120.6
Q ss_pred CceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCc
Q 015576 282 QVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHP 361 (404)
Q Consensus 282 ~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~ 361 (404)
+|+++|.+++....+|..+..++..|++++|+++|++++|||+||+|++|+.+.+...+.||++++++|++||.+++|||
T Consensus 2 ~Plari~~~a~~g~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGHP 81 (124)
T d1m3ka2 2 QPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHP 81 (124)
T ss_dssp CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCC
T ss_pred CcEEEEEEEEEEecChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeehHhhCCChhhcCCCCCccccccC
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 362 LGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 362 ~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
.|+||.+.+.+++++|+++++++|++++|.+||+|.|++||++
T Consensus 82 ~GaSGarl~~tl~~~L~~~~~~~Glas~C~gGG~g~A~liE~v 124 (124)
T d1m3ka2 82 IGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 124 (124)
T ss_dssp TTTHHHHHHHHHHHHHHHHTCSEEEEEEEETTTEEEEEEEECC
T ss_pred cCccchhHHHHHHHHHHhcCCCEEEEEecccccceeEEEEEeC
Confidence 9999999999999999999999999999999999999999986
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.95 E-value=1.5e-28 Score=195.88 Aligned_cols=123 Identities=40% Similarity=0.655 Sum_probs=118.2
Q ss_pred CceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHH--hCCCCCCcCCCCCccccC
Q 015576 282 QVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKL--LGLDPEQVNAHGGAVSLG 359 (404)
Q Consensus 282 ~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~--lg~~~~~vn~~Gg~~~~G 359 (404)
+|+++|.+++....+|..+..++..+++++|+++|++++|||+||+|++|+.+.+..++. ++++.+++|++||.+++|
T Consensus 1 KPlA~i~~~~~~g~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlG 80 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALG 80 (125)
T ss_dssp CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHC
T ss_pred CCeEEEEEEEEEecCHHHHhhccHHHHHhHhhccCcCccccchheeccccchhHHHHHHHhhccCchhhcCCCCCccccc
Confidence 578999999999999999999999999999999999999999999999999999999998 556778999999999999
Q ss_pred CcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 360 h~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
||+|+||.+++.+++++|+.+++++|++++|++||+|.|++|||+
T Consensus 81 HP~GASGari~~tl~~~L~~~~~~~G~as~C~gGG~g~A~~iE~i 125 (125)
T d1ulqa2 81 HPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVVEGM 125 (125)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCccccchhHHHHHHHHHHhcCCCEEEEEecccccceeEEEEEeC
Confidence 999999999999999999999999999999999999999999986
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=4.7e-28 Score=192.99 Aligned_cols=123 Identities=40% Similarity=0.707 Sum_probs=118.6
Q ss_pred cCCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCcccc
Q 015576 279 LGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSL 358 (404)
Q Consensus 279 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~ 358 (404)
++.+|+++|.+++....+|..+..++..|++++|+++|++++|||+||+|++|+.+.+...+.|+++++++|++||.+++
T Consensus 1 Lgl~plAri~~~a~~g~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAl 80 (124)
T d1afwa2 1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIAL 80 (124)
T ss_dssp TTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHH
T ss_pred CCCcEEEEEEEEEEEecCHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHHHcCCChhhccccCcccee
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEe
Q 015576 359 GHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 359 Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
|||.|+||.+++++++++|++ +++|++++|.+||+|.|+||||
T Consensus 81 GHP~GaSGarlv~~l~~~L~~--~~~glas~C~ggG~G~a~~ier 123 (124)
T d1afwa2 81 GHPLGCTGARQVATILRELKK--DQIGVVSMCIGTGMGAAAIFIK 123 (124)
T ss_dssp CBCTTTHHHHHHHHHHHHSCT--TCEEEEEEEETTTEEEEEEEEE
T ss_pred cCCcCCchHHHHHHHHHHhcc--CCEEEEEEcccCCcEEEEEEEe
Confidence 999999999999999999985 5899999999999999999997
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.95 E-value=7.9e-28 Score=192.75 Aligned_cols=125 Identities=44% Similarity=0.692 Sum_probs=119.3
Q ss_pred CCCceEEEEeeEEeccCCCccccchHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCC---CCCcCCCCCcc
Q 015576 280 GLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLD---PEQVNAHGGAV 356 (404)
Q Consensus 280 ~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~---~~~vn~~Gg~~ 356 (404)
|.+|+++|.+++....+|..+..++..|++++|+++|++++|||+||+|++|+.+.+...+.+++. .+++|++||.+
T Consensus 1 Gl~pla~i~~~~~~g~dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~GGai 80 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAI 80 (128)
T ss_dssp TCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHH
T ss_pred CCCEEEEEEEEEEEecCHHHhccCcHHHHHHHhhhcCccccccceEEeecccchhhhhhhhhcccccCCcceecCCCCcc
Confidence 468899999999999999999999999999999999999999999999999999999999998763 36899999999
Q ss_pred ccCCcccchHHHHHHHHHHHHHhcCCceeEEeeeccccceeeeEEEeC
Q 015576 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 357 ~~Gh~~gasG~~~l~~~~~~l~~~~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
++|||.|+||.+++.+++++|+++++++|++++|++||+|+|++|||+
T Consensus 81 AlGHP~GASGaRlv~~l~~~L~~~~~~~Glas~C~gGG~g~A~~iErv 128 (128)
T d1wdkc2 81 ALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIATVFERV 128 (128)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEECC
T ss_pred cccccccccchhHHHHHHHHHHhcCCCEEEEEecccccceeEEEEEeC
Confidence 999999999999999999999999999999999999999999999986
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.91 E-value=5.4e-25 Score=213.07 Aligned_cols=254 Identities=17% Similarity=0.145 Sum_probs=181.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc-ccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~-~aCas~~~al~~A~~~I~ 114 (404)
...+|+.+|+++||+++|++++|||.||++++++ +..|..+.+++..||+++.+..+.++ .+|++++.||..|..+|+
T Consensus 91 ~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~-~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~ 169 (372)
T d1teda_ 91 HAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVR 169 (372)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCC-CCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHHh
Confidence 4668999999999999999999999999998764 56788999999999998666667775 589999999999999999
Q ss_pred cCCCCeEEEeccccccCCchhhhhhhcCCCCCCccccccccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 015576 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~yg~~~~~~a~~~~~~~ 194 (404)
+|.++.+||+++|.++...... +
T Consensus 170 sg~~~~~LVV~~E~~s~~~~~~----------d----------------------------------------------- 192 (372)
T d1teda_ 170 AHPAMKALVVCIELCSVNAVFA----------D----------------------------------------------- 192 (372)
T ss_dssp HSTTCEEEEEEEEECGGGCCCC----------S-----------------------------------------------
T ss_pred cCCCccceeeeehhhcccccCC----------C-----------------------------------------------
Confidence 9999999999999876511000 0
Q ss_pred HHHHHHhhCCcccccceeeeecCCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHH
Q 015576 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (404)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~ 274 (404)
+ .++. ...++ +||||+|+||+.++
T Consensus 193 ----------------------------------~-------~~~~--------~~~~l-------fGDGAaA~ll~~~~ 216 (372)
T d1teda_ 193 ----------------------------------D-------INDV--------VIHSL-------FGDGCAALVIGASQ 216 (372)
T ss_dssp ----------------------------------S-------HHHH--------HHHHH-------BCEEEEEEEEEEEC
T ss_pred ----------------------------------c-------chhh--------hhhhh-------hcccceeEEeccCC
Confidence 0 0000 00022 79999999998654
Q ss_pred HHHHcCCCceEEEEeeEEecc-CCCc--------------c--------ccchHHHHHHHHHHcCCCCCCcceEeecccc
Q 015576 275 KALELGLQVIAKIRGFADAAQ-APEW--------------F--------TTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (404)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~-~~~~--------------~--------~~~~~~a~~~al~~agl~~~dId~~~~hd~~ 331 (404)
...... .....+.+...... .... . .....+.++++|+++|++++|||++.+|+.+
T Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~ 295 (372)
T d1teda_ 217 VQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGG 295 (372)
T ss_dssp TTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSC
T ss_pred cccccC-CceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccCcc
Confidence 322111 11123333322111 0000 0 0112578999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcCCCC-CccccCCcccchHHHHHHHHHHHHHhcC-CceeEEeeeccccceeeeEEEeC
Q 015576 332 SVVAIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHKK-GKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 332 ~~~~~~~~e~lg~~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~~l~~~~-~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
..+...+.+.||++.+++..+- .+..+||+.++|-...+.+++++-+... +++++...++.|-++.++|||.|
T Consensus 296 ~~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~ 370 (372)
T d1teda_ 296 PKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDII 370 (372)
T ss_dssp HHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhheee
Confidence 9999999999999988764321 1234699988886666656655544333 36777766666557889999965
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.74 E-value=1.8e-17 Score=144.59 Aligned_cols=146 Identities=23% Similarity=0.157 Sum_probs=120.7
Q ss_pred CCCccccCCCCccccccceeeecCHHHHHHcCC-CceEEEEeeEEeccCCCc--cccchHHHHHHHHHHcCCCCCCcceE
Q 015576 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAAQAPEW--FTTAPSLAIPKAIANAGLEASQIDYY 325 (404)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~-~~~~~i~g~~~~~~~~~~--~~~~~~~a~~~al~~agl~~~dId~~ 325 (404)
++|++ ++||++++||++.+.|++++. ++++.|.|++..++.... ...+..++++++|+++|++++|||++
T Consensus 13 a~G~~-------~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~~~~g~~~~i~~aL~~a~i~~~di~~v 85 (194)
T d1tqyb2 13 AAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVV 85 (194)
T ss_dssp CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEE
T ss_pred CCCEe-------eEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccccchhhhhhhhhhhcccccccccceeee
Confidence 89999 699999999999999998886 589999999988764332 23456889999999999999999999
Q ss_pred eecccchHH-HH----HHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcC-------------------
Q 015576 326 EINEAFSVV-AI----ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------------- 381 (404)
Q Consensus 326 ~~hd~~~~~-~~----~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~------------------- 381 (404)
+.|-..+.. .. .+.+.|| ...+.++..|..+||+.+++|+.+++.++..|+++-
T Consensus 86 ~ahgtGt~~~D~~E~~al~~~f~--~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~~~~~~~~v 163 (194)
T d1tqyb2 86 FADGAGVPELDAAEARAIGRVFG--REGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLV 163 (194)
T ss_dssp ECCCCCSHHHHHHHHHHHHHHHC--TTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEEC
T ss_pred eccccCcccccHHHhhhhhhhhh--ccccccccccccccccccccccceehhhhhhhhhceeccccCCCCCCcccCcccc
Confidence 999888765 22 2234455 345667778999999999999999999999999761
Q ss_pred --------CceeEEeeeccccceeeeEEEe
Q 015576 382 --------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 382 --------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
.++.++..++.||.+.++|||+
T Consensus 164 ~~~~~~~~~~~a~v~s~GfgG~na~~vl~~ 193 (194)
T d1tqyb2 164 LGEPRSTAPRTALVLARGRWGFNSAAVLRR 193 (194)
T ss_dssp BSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred CCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence 2467788899999999999996
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.73 E-value=1e-17 Score=147.49 Aligned_cols=158 Identities=25% Similarity=0.279 Sum_probs=131.1
Q ss_pred CCCCCCceeeccCCccccCCHHHHhcCCCCcCCCCccccCCCCccccccceeeecCHHHHHHcCCCceEEEEeeEEeccC
Q 015576 217 SGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA 296 (404)
Q Consensus 217 ~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~~~~~a~~~~~~~~~~i~g~~~~~~~ 296 (404)
+..++| ||++ ++|++ ++||++++||.+.+.|++++.++++.|.|++...+.
T Consensus 4 ~~~~rp---FD~~-------------------adG~v-------~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg 54 (205)
T d1tqya2 4 EHASRP---FDGT-------------------RDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNA 54 (205)
T ss_dssp GGCCCT---TBTT-------------------CCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECS
T ss_pred CCCCCC---ccCC-------------------CCCEe-------eEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccc
Confidence 667788 8887 89999 699999999999999999999999999999998774
Q ss_pred CCc-----cccchHHHHHHHHHHcCCCCCCcceEeecccchHH-----HHHHHHHhCCCCCCcCCCCCccccCCcccchH
Q 015576 297 PEW-----FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSG 366 (404)
Q Consensus 297 ~~~-----~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG 366 (404)
... .......+++++|++++++++|||||+.|...+.. ...+.+.++-...++.++..|..+||+.+++|
T Consensus 55 ~~~~~~~~~~~~~~~~~~~al~~a~i~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG 134 (205)
T d1tqya2 55 YHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIG 134 (205)
T ss_dssp SCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHH
T ss_pred cccCcccccccccchhhhhHHhhhcCCccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeecccccccccccc
Confidence 332 22345788999999999999999999999888865 22333445544456778899999999999999
Q ss_pred HHHHHHHHHHHHhc---------------------------CCceeEEeeeccccceeeeEEEe
Q 015576 367 ARILVTLLGVLRHK---------------------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 367 ~~~l~~~~~~l~~~---------------------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+..++.++.+|+++ ..++.+++.++.||.+.++|||.
T Consensus 135 ~~~li~~~~~l~~g~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~ 198 (205)
T d1tqya2 135 SLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD 198 (205)
T ss_dssp HHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred hhHHHHHHHHHhCCeEcccCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEee
Confidence 99999999999976 12467788889999999999984
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=2.8e-18 Score=147.34 Aligned_cols=108 Identities=14% Similarity=0.111 Sum_probs=97.6
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
|++.+++-..++++..+|+.+|+++||+++++++++||.|++++.++++..|..+..++..||++ +.++++++.+|+++
T Consensus 37 ~Gi~~r~~~~~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~-~~~~~di~~~C~g~ 115 (174)
T d1hnja1 37 TGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGF 115 (174)
T ss_dssp HCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGGHH
T ss_pred cCcceeeecCCCccchHHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCC-chhhhhhhhhhccH
Confidence 34433333446789999999999999999999999999999999999988899999999999997 78999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
+.||..|..+|++|.++.+||+++|..|.
T Consensus 116 ~~al~~A~~~i~sg~~~~~Lvv~~e~~S~ 144 (174)
T d1hnja1 116 TYALSVADQYVKSGAVKYALVVGSDVLAR 144 (174)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECHHH
T ss_pred HHHHHHHHHHHhcCCcceeEEEeeehhhc
Confidence 99999999999999999999999998765
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.72 E-value=8.6e-18 Score=145.13 Aligned_cols=108 Identities=18% Similarity=0.145 Sum_probs=98.3
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
|++.+++-..++++..+|+.+|+++||+++++++++||.+++++.++++..+..+..++..+|.+ ++.+++++.+|+++
T Consensus 44 tGi~~R~~~~~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~-~~~~~Dv~~~C~g~ 122 (181)
T d1mzja1 44 TGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACAGF 122 (181)
T ss_dssp HCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGGHH
T ss_pred cCcceehhhccCCcHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCC-CccceeHHhhhccH
Confidence 44444444567899999999999999999999999999999999999888889999999999986 78999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
+.||..|..++++|.++.+||+++|..|.
T Consensus 123 ~~aL~~A~~~i~~~~~~~~LvV~~e~~s~ 151 (181)
T d1mzja1 123 CHALSIAADAVESGGSRHVLVVATERMTD 151 (181)
T ss_dssp HHHHHHHHHHHHHSSCSCEEEEEEEEGGG
T ss_pred HHHHHHHhCHhhcCCCceeEEeeeccccc
Confidence 99999999999999999999999998875
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.70 E-value=1.4e-17 Score=142.58 Aligned_cols=108 Identities=19% Similarity=0.139 Sum_probs=97.6
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCc
Q 015576 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (404)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas 101 (404)
++++.+|+-..++++..+|+.+|+++||+++|++|++||.||+++.++++..|..+..++..||. ++.+++++.+|++
T Consensus 34 ~~Gi~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~--~~~~~di~~~C~g 111 (172)
T d1ub7a1 34 RTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCPG 111 (172)
T ss_dssp HTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTTH
T ss_pred ccCceeeeeccccccccHHHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhcc--Cccceeehhcccc
Confidence 34554454456678999999999999999999999999999999999988888899999999995 5789999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 102 ~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
++.+|..|..++++|.++.+||+++|..|.
T Consensus 112 ~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~ 141 (172)
T d1ub7a1 112 WIYALAQAHALVEAGLAQKVLAVGAEALSK 141 (172)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred HHHHHHHHhhhhhcCCcceeEEeccccccc
Confidence 999999999999999999999999999875
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.64 E-value=9.6e-17 Score=140.68 Aligned_cols=95 Identities=14% Similarity=0.023 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeE-cccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v-~~aCas~~~al~~A~~~I~ 114 (404)
...+|+.+|+++||+++|+++++||.||++++++. .-|..+..++..+|++++...+++ +.+|++++.+|..|..+|+
T Consensus 74 ~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~-~~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~ 152 (200)
T d1u0ma1 74 EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGF-MMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCT 152 (200)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSC-CSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCC-CcchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999988764 467788999999999877888888 5799999999999999999
Q ss_pred cCCCCeEEEeccccccC
Q 015576 115 LGINDIVVAGGMESMSN 131 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~ 131 (404)
+|..+.|||+++|.+|.
T Consensus 153 ~~~~~~vLvv~~e~~S~ 169 (200)
T d1u0ma1 153 AYPEANALIVACEFCSL 169 (200)
T ss_dssp HSTTCEEEEEEEEEGGG
T ss_pred hCCCCEEEEEEEecccc
Confidence 99999999999999875
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.57 E-value=1.6e-15 Score=137.70 Aligned_cols=94 Identities=27% Similarity=0.369 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCCC--------------------------CCcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------GQAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~~--------------------------~~~~a~~i~~~lG 85 (404)
+...++..++++||+++|+++++++ ++++|+..+... ....+.+++..+|
T Consensus 70 ~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~g 149 (249)
T d1j3na1 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcC
Confidence 4566899999999999999987765 577887544210 1125678999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
+ ++|+++++++|+|++.||..|+.+|++|++|++||+|+|....
T Consensus 150 l--~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~ 193 (249)
T d1j3na1 150 F--TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT 193 (249)
T ss_dssp C--CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred C--CCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhC
Confidence 9 5899999999999999999999999999999999999998665
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=1.9e-15 Score=137.14 Aligned_cols=94 Identities=21% Similarity=0.231 Sum_probs=77.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC-----------------C---------CCcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~-----------------~---------~~~~a~~i~~~lG 85 (404)
+...|+..++++||+++|+++++.+ ++++|+..... . ....+.+++..+|
T Consensus 71 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 150 (250)
T d2gfva1 71 AFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYG 150 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhC
Confidence 3567899999999999999877665 36666643221 0 0125778999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
+ ++|+++++++|+|++.||..|+.+|++|++|++||+|+|...+
T Consensus 151 l--~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~ 194 (250)
T d2gfva1 151 L--RGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKAST 194 (250)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred C--CCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcC
Confidence 9 5899999999999999999999999999999999999997665
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.53 E-value=3.4e-15 Score=126.87 Aligned_cols=107 Identities=15% Similarity=0.129 Sum_probs=94.1
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEcccCCcH
Q 015576 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (404)
Q Consensus 23 t~~~~~~~~~~~~~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~~aCas~ 102 (404)
|.+.+++-..++++..+|+.+|++++|++.+ +++||.+++++..+++..+..+..++..+|++++..+++++.+|+++
T Consensus 36 ~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~~~--~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~ 113 (166)
T d1xpma1 36 IGQTEMAVSPVNQDIVSMGANAAKDIITDED--KKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAA 113 (166)
T ss_dssp TCCSEEEECCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTH
T ss_pred cCcEEEEeCCCccCHHHHHHHHHHhhhcccc--CCCCCeEEEeccccccccchhHHHHHHhhccccceEEeeecccHHHH
Confidence 4444443345678999999999999998764 78999999999999888889999999999998788999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 103 MKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 103 ~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
+.+|..|..++++|..+.+||++.|..+.
T Consensus 114 ~~al~~A~~~i~~~~~~~alvV~sd~~~~ 142 (166)
T d1xpma1 114 TPAIQLAKDYLATRPNEKVLVIATDTARY 142 (166)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEEEEEEECC
T ss_pred HHHHHHHhhHHhcCCCCeEEEEEEceEec
Confidence 99999999999999999999999997554
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.51 E-value=4.6e-14 Score=126.33 Aligned_cols=95 Identities=15% Similarity=0.073 Sum_probs=81.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCccee-eEcccCCcHHHHHHHHHHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT-TINKVCSSGMKAVMLAAQSIQ 114 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~-~v~~aCas~~~al~~A~~~I~ 114 (404)
...+|+.+|+++||+++|+++++||.||++++++... +..+..+.+.+|+..+...+ .++.+|++++.+|..|..+|+
T Consensus 101 ~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~-p~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~ 179 (235)
T d1bi5a1 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE 179 (235)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCS-SCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCcc-CccHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999988664 44555666777765455555 458899999999999999999
Q ss_pred cCCCCeEEEeccccccC
Q 015576 115 LGINDIVVAGGMESMSN 131 (404)
Q Consensus 115 aG~~~~vLv~g~e~~s~ 131 (404)
+|..+.|||+++|..|.
T Consensus 180 ~~~~~~vLvV~~E~~S~ 196 (235)
T d1bi5a1 180 NNKGARVLVVCSEVTAV 196 (235)
T ss_dssp TSTTCEEEEEEEECGGG
T ss_pred cCCCCeEEEEEeeecce
Confidence 99999999999998886
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.49 E-value=4.4e-14 Score=127.83 Aligned_cols=94 Identities=17% Similarity=0.201 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC-----------------C---------CCcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~-----------------~---------~~~~a~~i~~~lG 85 (404)
+...++.+++.+||+++|++++.+. .+++|+..+.. . ....+..++..+|
T Consensus 71 ~~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (250)
T d1e5ma1 71 RFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLG 150 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhcc
Confidence 3457899999999999999876554 47777643211 0 1125778888999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
+ ++|+++++++|+|++.||..|..+|++|++|.+||+|+|....
T Consensus 151 l--~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~ 194 (250)
T d1e5ma1 151 A--KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAIT 194 (250)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred C--CCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcC
Confidence 9 6899999999999999999999999999999999999997554
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.40 E-value=4.4e-13 Score=112.60 Aligned_cols=123 Identities=23% Similarity=0.385 Sum_probs=98.6
Q ss_pred CceEEEEeeEEeccC-----CCccccchHHHHHHHHHHcCCCCCCcceEeecccchHH-HHHH----HHHhCCCCCCcCC
Q 015576 282 QVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV-AIAN----QKLLGLDPEQVNA 351 (404)
Q Consensus 282 ~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~-~~~~----~e~lg~~~~~vn~ 351 (404)
|+|++|.|++.++|. +.........+++++|+++|++|+|||+++.|...+.. +... .+.++-...++.+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 578999999999875 33334456789999999999999999999999888875 2222 2333322345677
Q ss_pred CCCccccCCcccchHHHHHHHHHHHHHhcC--------------------------CceeEEeeeccccceeeeEEEeC
Q 015576 352 HGGAVSLGHPLGCSGARILVTLLGVLRHKK--------------------------GKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~--------------------------~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+..|..+||+.+++|+..++.++.+|+++. .++.++..++.||.++.+|||||
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~kv 159 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKRV 159 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEECC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEEC
Confidence 888999999999999999999999999761 25678888999999999999986
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=8.4e-13 Score=111.08 Aligned_cols=123 Identities=25% Similarity=0.342 Sum_probs=99.4
Q ss_pred CceEEEEeeEEeccCCC-----ccccchHHHHHHHHHHcCCCCCCcceEeecccchHH-----HHHHHHHhCCCCCCcCC
Q 015576 282 QVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV-----AIANQKLLGLDPEQVNA 351 (404)
Q Consensus 282 ~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~-----~~~~~e~lg~~~~~vn~ 351 (404)
|+|++|.|++.++|... ........+++++|+++|++++||||++.|...+.. ...+.+.++-...++.+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 57899999999987532 223345789999999999999999999999887765 22333445655567788
Q ss_pred CCCccccCCcccchHHHHHHHHHHHHHhc----------------------------CCceeEEeeeccccceeeeEEEe
Q 015576 352 HGGAVSLGHPLGCSGARILVTLLGVLRHK----------------------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~----------------------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+..|..+||+.+++|+..++.++.+|+++ ..++.++..+++||.+..+|||+
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 88999999999999999999999999975 12456788899999999999998
Q ss_pred C
Q 015576 404 M 404 (404)
Q Consensus 404 ~ 404 (404)
+
T Consensus 161 ~ 161 (161)
T d2gfva2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=4.3e-13 Score=121.42 Aligned_cols=93 Identities=25% Similarity=0.265 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcc-----CeEEEEeccCCC-------------C--------------CCcHHHHHHHHC
Q 015576 37 ATKLGSIAIECALKRANVKPLLV-----QEVFFGNVLSAN-------------L--------------GQAPARQAALGA 84 (404)
Q Consensus 37 ~~~l~~~A~~~AL~~agi~~~~i-----d~li~g~~~~~~-------------~--------------~~~~a~~i~~~l 84 (404)
...+...+..+|++++++..+.. =++++|+..+.. . ....+.+++..+
T Consensus 71 ~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 150 (253)
T d2vbaa1 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (253)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred hhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceecccc
Confidence 35588899999999999864322 146666543321 0 012567899999
Q ss_pred CCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 85 Gl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
|+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|....
T Consensus 151 g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~ 195 (253)
T d2vbaa1 151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW 195 (253)
T ss_dssp TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred Cc--ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhc
Confidence 99 6899999999999999999999999999999999999997654
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.37 E-value=1.2e-12 Score=110.15 Aligned_cols=122 Identities=18% Similarity=0.224 Sum_probs=98.5
Q ss_pred CceEEEEeeEEeccCCC-----ccccchHHHHHHHHHHcCCCCCCcceEeecccchHH----HHHH-HHHhCCCCCCcCC
Q 015576 282 QVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AIAN-QKLLGLDPEQVNA 351 (404)
Q Consensus 282 ~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~----~~~~-~e~lg~~~~~vn~ 351 (404)
|+|++|.|++...|... ....+..++++++|+++|++++|||+++.|...+.. +... .+.++-...++.+
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 57899999999987532 233455789999999999999999999999888765 2222 2345544456788
Q ss_pred CCCccccCCcccchHHHHHHHHHHHHHhcC---------------------------CceeEEeeeccccceeeeEEEe
Q 015576 352 HGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~---------------------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+..|..+||+.+|+|+..++.++.+++++. .++.++..++.||.++++|||+
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 159 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK 159 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEee
Confidence 889999999999999999999999999761 2466788899999999999986
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.36 E-value=2.3e-12 Score=107.86 Aligned_cols=119 Identities=20% Similarity=0.304 Sum_probs=96.1
Q ss_pred CceEEEEeeEEeccCCC-----ccccchHHHHHHHHHHcCCCCCCcceEeecccchHH----HHH-HHHHhCCCCCCcCC
Q 015576 282 QVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AIA-NQKLLGLDPEQVNA 351 (404)
Q Consensus 282 ~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~----~~~-~~e~lg~~~~~vn~ 351 (404)
.+|++|.|++.+.|... ....+..++++++|+++|++++|||+++.|...+.. +.. +.+.+| +++.+
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg---~~~~v 77 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLG---KEVPV 77 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHC---SSSEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcC---CcccC
Confidence 36899999999987533 223345789999999999999999999999888765 222 223454 45777
Q ss_pred CCCccccCCcccchHHHHHHHHHHHHHhc---------------------------CCceeEEeeeccccceeeeEEEe
Q 015576 352 HGGAVSLGHPLGCSGARILVTLLGVLRHK---------------------------KGKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~---------------------------~~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+..|..+||+.+++|+.+++.++.+|+++ ..++.++..+++||.+.++|||+
T Consensus 78 ~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 156 (158)
T d1ox0a2 78 SSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 156 (158)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEe
Confidence 88999999999999999999999999986 12567788899999999999986
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.34 E-value=2.2e-12 Score=117.54 Aligned_cols=54 Identities=26% Similarity=0.402 Sum_probs=50.9
Q ss_pred HHHHHHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 76 ~a~~i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
.+.+++..+|+ ++|+++++++|+|++.||+.|+.+|++|++|.+||+|+|....
T Consensus 158 ~a~~is~~~~l--~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~ 211 (270)
T d2ix4a1 158 ASGHVSMKYGF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSID 211 (270)
T ss_dssp HHHHHHHHHTC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred hHHHHHHHhCC--CCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhh
Confidence 67899999999 5899999999999999999999999999999999999998765
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.27 E-value=8.9e-12 Score=104.63 Aligned_cols=121 Identities=18% Similarity=0.261 Sum_probs=95.2
Q ss_pred eEEEEeeEEeccCCC-----ccccchHHHHHHHHHHcCCCCCCcceEeecccchHH-HHHHH----HHhCCC--CCCcCC
Q 015576 284 IAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV-AIANQ----KLLGLD--PEQVNA 351 (404)
Q Consensus 284 ~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~-~~~~~----e~lg~~--~~~vn~ 351 (404)
|++|.|++.+.|... ........+++++|++++++++||||++.|-..+.. +...+ +.++-. ..++.+
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 589999999987533 223334678999999999999999999999887765 22222 333421 246778
Q ss_pred CCCccccCCcccchHHHHHHHHHHHHHhcC----------------------------CceeEEeeeccccceeeeEEEe
Q 015576 352 HGGAVSLGHPLGCSGARILVTLLGVLRHKK----------------------------GKYGVGGICNGGGGASALVLEL 403 (404)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~----------------------------~~~gl~~~~~~gG~~~a~ll~~ 403 (404)
+..|..+||+.+++|+..++.++.+|+++. .++.+++.+++||.+..+|||+
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 889999999999999999999999999861 2467788899999999999997
Q ss_pred C
Q 015576 404 M 404 (404)
Q Consensus 404 ~ 404 (404)
|
T Consensus 161 ~ 161 (161)
T d2ix4a2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.06 E-value=1.3e-10 Score=102.21 Aligned_cols=94 Identities=20% Similarity=0.309 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCe----EEEEeccCCCC--------------------------------CCcHHHH
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANL--------------------------------GQAPARQ 79 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id~----li~g~~~~~~~--------------------------------~~~~a~~ 79 (404)
+...|+..|+++||++||+++++++. +++++..+... ....+.+
T Consensus 70 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 149 (216)
T d1tqya1 70 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE 149 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred cchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHH
Confidence 46779999999999999999876653 45554332110 0014678
Q ss_pred HHHHCCCCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccC
Q 015576 80 AALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (404)
Q Consensus 80 i~~~lGl~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~ 131 (404)
++..+|+ .+|+++++.+|+|++.||..|..+|++|++|++||+|+|....
T Consensus 150 ia~~~g~--~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~ 199 (216)
T d1tqya1 150 VAWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT 199 (216)
T ss_dssp HHHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred HHHhcCc--cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccC
Confidence 9999999 5899999999999999999999999999999999999997655
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.01 E-value=2.4e-10 Score=99.82 Aligned_cols=95 Identities=23% Similarity=0.332 Sum_probs=77.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccC----eEEEEeccCCC-----------------CC---------CcHHHHHHHHCC
Q 015576 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----------------LG---------QAPARQAALGAG 85 (404)
Q Consensus 36 ~~~~l~~~A~~~AL~~agi~~~~id----~li~g~~~~~~-----------------~~---------~~~a~~i~~~lG 85 (404)
+...|+..|+++||+++|+++++++ .+++|+..+.. .. ...+.+++..+|
T Consensus 69 ~~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 148 (208)
T d1tqyb1 69 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 148 (208)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred cccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhccc
Confidence 4567999999999999999988775 47777654311 00 015678999999
Q ss_pred CCCCcceeeEcccCCcHHHHHHHHHHHHHcCCCCeEEEeccccccCCch
Q 015576 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134 (404)
Q Consensus 86 l~~~~~~~~v~~aCas~~~al~~A~~~I~aG~~~~vLv~g~e~~s~~p~ 134 (404)
+ ++|+++++++|+|++.||..|+++|++| +|++||+|+|..-. |.
T Consensus 149 l--~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~-p~ 193 (208)
T d1tqyb1 149 M--RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD-PW 193 (208)
T ss_dssp C--CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCS-HH
T ss_pred c--cceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccC-HH
Confidence 9 6899999999999999999999999999 89999999997554 54
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.98 E-value=1.8e-09 Score=89.11 Aligned_cols=116 Identities=19% Similarity=0.262 Sum_probs=88.2
Q ss_pred eEEEEeeEEeccCCCcc---ccchHHHHHHHHHHcCCCCCCcceEeecccchHH----H-HHHHHHhCCCCCCcCCCCCc
Q 015576 284 IAKIRGFADAAQAPEWF---TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGA 355 (404)
Q Consensus 284 ~~~i~g~~~~~~~~~~~---~~~~~~a~~~al~~agl~~~dId~~~~hd~~~~~----~-~~~~e~lg~~~~~vn~~Gg~ 355 (404)
|++|.|++.+.|..... ..+..++++++++.+ +.|||+++.|-..+.. + ..+.+.||- .+..++..|
T Consensus 1 Yaei~G~g~~~Dg~~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~--~~~~v~s~K 75 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGD--KSPAISATK 75 (151)
T ss_dssp CEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTT--CCCEEECTH
T ss_pred CEEEEEEEEecCCCCCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCC--CCcccccch
Confidence 57999999998764322 234467788888765 5799999999777754 2 223344553 344566789
Q ss_pred cccCCcccchHHHHHHHHHHHHHhcC---------------------------CceeEEeeeccccceeeeEEEeC
Q 015576 356 VSLGHPLGCSGARILVTLLGVLRHKK---------------------------GKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 356 ~~~Gh~~gasG~~~l~~~~~~l~~~~---------------------------~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
..+||+.+++|+..++.++..|+++. .++.++..++.||.+.++|||+|
T Consensus 76 ~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~v 151 (151)
T d2vbaa2 76 AMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKL 151 (151)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred hhccccccchhhhhhhHHHHHHHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEEC
Confidence 99999999999999999999998751 24567888999999999999986
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.94 E-value=1.5e-09 Score=89.29 Aligned_cols=98 Identities=23% Similarity=0.157 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCc
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGK 383 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~ 383 (404)
..++++++|+++|++++|||++.+|+++......+.+.||++++++..+ ...-+||+.+++-...+.+++++-+-++|+
T Consensus 50 v~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~-~~~~~GNt~sasip~~L~~a~~~g~i~~Gd 128 (148)
T d1u6ea2 50 MGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVAN-DIEHTGNTSAASIPLAMAELLTTGAAKPGD 128 (148)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECC-THHHHCBCGGGHHHHHHHHHHHHTSSCTTC
T ss_pred HHHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhhh-hHHhhCCCccchHHHHHHHHHHcCCCCCCC
Confidence 3578999999999999999999999999999999999999998876543 245679999999888888888887777888
Q ss_pred eeEEeeeccccceeeeEEE
Q 015576 384 YGVGGICNGGGGASALVLE 402 (404)
Q Consensus 384 ~gl~~~~~~gG~~~a~ll~ 402 (404)
+.+...+++|-.+.++|++
T Consensus 129 ~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 129 LALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp EEEEEEEETTTEEEEEEEE
T ss_pred EEEEEEEchhhhheEEEEe
Confidence 8887777766677888876
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=98.87 E-value=2.7e-09 Score=87.88 Aligned_cols=96 Identities=24% Similarity=0.165 Sum_probs=83.9
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCce
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKY 384 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~~ 384 (404)
.++++++|+++|++++|||++.+|+++......+.+.||++++++..+ ...+||+.++|-...+.+++++-+-+++++
T Consensus 50 p~~i~~~L~~~g~~~~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~--~~~~Gn~~sasip~~L~~~~~~~~~~~Gd~ 127 (149)
T d1ub7a2 50 NTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAVDAGRIREGDH 127 (149)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTSSCTTCE
T ss_pred HHHHHHHHHhhccccccccEEEeeccchHHHHHHHhhccchhhHHHHH--HHHhcCCcchhHHHHHHHHHHcCCCCCCCE
Confidence 578999999999999999999999999999999999999999887665 456899999998888877777777778888
Q ss_pred eEEeeeccccceeeeEEE
Q 015576 385 GVGGICNGGGGASALVLE 402 (404)
Q Consensus 385 gl~~~~~~gG~~~a~ll~ 402 (404)
.+...++.|-.+.++|||
T Consensus 128 vll~g~G~G~s~ga~llr 145 (149)
T d1ub7a2 128 VLLVSFGAGLTWAAAVLT 145 (149)
T ss_dssp EEEEEEETTTEEEEEEEE
T ss_pred EEEEEEchHhhhEEEEEE
Confidence 888878777788888887
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=7.8e-09 Score=84.43 Aligned_cols=97 Identities=20% Similarity=0.156 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCc
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGK 383 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~ 383 (404)
..++++++|+++|++++|||++.+|+++......+.+.||++++++..+ ...+||+.+++-...+.+++++-+-++|+
T Consensus 46 ~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~--~~~~GN~~sasip~~L~~~~~~~~~~~Gd 123 (143)
T d1hnja2 46 LAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPCALDEAVRDGRIKPGQ 123 (143)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTC
T ss_pred hhHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhhhh--hhhhcccccchHHHHHHHHHHhCCCCCCC
Confidence 3578999999999999999999999999999999999999999877655 56689999999887877777776667788
Q ss_pred eeEEeeeccccceeeeEEE
Q 015576 384 YGVGGICNGGGGASALVLE 402 (404)
Q Consensus 384 ~gl~~~~~~gG~~~a~ll~ 402 (404)
+.+...++.|-.+.++||+
T Consensus 124 ~vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 124 LVLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp EEEEEEEETTTEEEEEEEE
T ss_pred EEEEEEEehhhhhEEEEEE
Confidence 8887777776677788876
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=98.65 E-value=4.2e-08 Score=80.84 Aligned_cols=98 Identities=18% Similarity=0.039 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHHHhcCCc
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGK 383 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~~~ 383 (404)
..++++++|+++|++++|||++.+|+.+..+...+.+.||++++++... -..-+||+.++|-...+.+++++-+.++++
T Consensus 50 vp~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~-~~~~~GNt~Sasip~~L~~~~~~~~~~~Gd 128 (153)
T d1mzja2 50 VVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSR-DAEDTGNTSSASVALALDRLVRSGAVPGGG 128 (153)
T ss_dssp HHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECC-THHHHCBCTTHHHHHHHHHHHHHTSSCTTC
T ss_pred HHHHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhCCCchhcchh-hhhhcCCcccchHHHHHHHHHHcCCCCCCC
Confidence 3578999999999999999999999999999999999999998875321 134579998888666777777766666778
Q ss_pred eeEEeeeccccceeeeEEE
Q 015576 384 YGVGGICNGGGGASALVLE 402 (404)
Q Consensus 384 ~gl~~~~~~gG~~~a~ll~ 402 (404)
+.+...++.|=.+.+++|+
T Consensus 129 ~ill~~fG~G~s~~~~~l~ 147 (153)
T d1mzja2 129 PALMIGFGAGLSYAGQALL 147 (153)
T ss_dssp EEEEEEEETTTEEEEEEEE
T ss_pred EEEEEEEchhhhhhEEEEE
Confidence 8777666555455666665
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.42 E-value=6.5e-08 Score=79.23 Aligned_cols=100 Identities=16% Similarity=0.126 Sum_probs=77.9
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCC-CccccCCcccchHHHHHHHHHHHHHhcC
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHKK 381 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~~l~~~~ 381 (404)
...++++++|+++|++++|||++.+|+.+......+.+.||++++++..+- ...-+||+.++|-...+.+++++=+-++
T Consensus 44 ~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~~~~~~~~~ 123 (148)
T d1u0ma2 44 PLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEE 123 (148)
T ss_dssp HHHHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCS
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHHHHcCCCCC
Confidence 346789999999999999999999999999999999999999998864321 1244699988886666655555434456
Q ss_pred CceeEEeeeccccceeeeEEE
Q 015576 382 GKYGVGGICNGGGGASALVLE 402 (404)
Q Consensus 382 ~~~gl~~~~~~gG~~~a~ll~ 402 (404)
+++.+...++.|-...++|+|
T Consensus 124 Gd~ill~gfG~G~s~~~~llr 144 (148)
T d1u0ma2 124 GARGLLAGFGPGITAEMSLGC 144 (148)
T ss_dssp SCCCEEEEEETTTEEEEEEEE
T ss_pred CCEEEEEEEchHhEeeEEEEE
Confidence 778888777766677778876
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=98.30 E-value=8.6e-07 Score=73.14 Aligned_cols=102 Identities=14% Similarity=0.071 Sum_probs=81.4
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhcC
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~ 381 (404)
...+.++++|+++|++.+|||++.+|+.+..+...+.+.||++++++..+ -....+|++.++|-...+-++.++-..++
T Consensus 48 ~v~~~v~~~l~~~gl~~~di~~~v~Hqgg~~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~~~~~~~ 127 (160)
T d1ee0a2 48 NIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEG 127 (160)
T ss_dssp HHHHHHHHHHGGGTCCCGGGSEEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhccCCccccceEeecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHhhhhhcC
Confidence 34678999999999999999999999999999999999999999887543 12345799999998777777776655443
Q ss_pred C-------ceeEEeeeccccceeeeEEEeC
Q 015576 382 G-------KYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 382 ~-------~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
+ ++++..+++.|=..-++||+++
T Consensus 128 ~~~~g~~~d~~ll~afG~Glt~~~~llr~~ 157 (160)
T d1ee0a2 128 KSTTGEGLDCGVLFGFGPGMTVETVVLRSV 157 (160)
T ss_dssp CSBTBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCCcCCCcCEEEEEEEChHHHHHHHHHeec
Confidence 3 4677777766667888899874
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.24 E-value=1.2e-06 Score=71.72 Aligned_cols=102 Identities=17% Similarity=0.100 Sum_probs=80.2
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCC-CCccccCCcccchHHHHHHHHHHHHHhcC
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~~l~~~~ 381 (404)
...+.++++|+++|++.+|||++.+|+.+..+.....+.||++++++..+ -....+|++.++|-...+-++.++-...+
T Consensus 43 ~i~~~~~~~l~~~gl~~~di~~~v~Hqgg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~~~~~~~ 122 (154)
T d1bi5a2 43 NITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNG 122 (154)
T ss_dssp HHHHHHHHHHGGGTCCCTTSSEEEECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCccccceEeeccccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHHhhhccC
Confidence 34678999999999999999999999999999999999999999877543 11345799999997777777766654332
Q ss_pred C-------ceeEEeeeccccceeeeEEEeC
Q 015576 382 G-------KYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 382 ~-------~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
. ++++..+++.|=..-++||+++
T Consensus 123 ~~~~g~~~~~~~~~aFG~Glt~~~~llr~~ 152 (154)
T d1bi5a2 123 LKTTGEGLEWGVLFGFGPGLTIETVVLRSV 152 (154)
T ss_dssp CSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CcccCCCcCEEEEEEEchHHhHHHHHHhcC
Confidence 2 5677776766667788898874
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=98.17 E-value=2.3e-06 Score=70.30 Aligned_cols=102 Identities=13% Similarity=0.016 Sum_probs=80.2
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCCCcCCCC-CccccCCcccchHHHHHHHHHHHHHhc-
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHK- 380 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~~l~~~- 380 (404)
...+.++++|+++|++.+|||++.+|+.+..+...+.+.||++++++..+= -...+|++.++|-...+-++.++-..+
T Consensus 44 ~i~~~~~~~l~~~~~~~~did~~i~Hqgg~~Ild~v~~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~~~~~~~ 123 (156)
T d1u0ua2 44 NIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNG 123 (156)
T ss_dssp HHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCChhhCceEeecCCcHHHHHHHHHHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHHhhhhcc
Confidence 446789999999999999999999999999999999999999998875431 123579998888777776666655432
Q ss_pred ------CCceeEEeeeccccceeeeEEEeC
Q 015576 381 ------KGKYGVGGICNGGGGASALVLELM 404 (404)
Q Consensus 381 ------~~~~gl~~~~~~gG~~~a~ll~~~ 404 (404)
++++++..+++.|=..-++|||+|
T Consensus 124 ~~~~~~~~~~~~~~gfG~Glt~~~~llr~~ 153 (156)
T d1u0ua2 124 CSTTGEGLEMGVLFGFGPGLTIETVVLKSV 153 (156)
T ss_dssp CSBSBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCCcCCCCCEEEEEEECHHHhHHHHHHeeC
Confidence 236777777766667788999875
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.89 E-value=0.02 Score=47.93 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHHHh
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVLRH 379 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l~~ 379 (404)
.+|++++|+++|++++|||++... +..+.....+.+.||+.+.-... ...+ .|++|.. .+..+...++.
T Consensus 80 ~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~-----~i~~-~gC~g~~~al~~A~~~l~~ 153 (200)
T d1u0ma1 80 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQI-----PIAQ-LGCAAGGAAINRAHDFCTA 153 (200)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEE-----EECS-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEe-----cccc-chhhHHHHHHHHHHHHHHh
Confidence 689999999999999999999743 33344556677889986532111 1112 2455544 55555556666
Q ss_pred cCCceeEEe
Q 015576 380 KKGKYGVGG 388 (404)
Q Consensus 380 ~~~~~gl~~ 388 (404)
.+.++.|+.
T Consensus 154 ~~~~~vLvv 162 (200)
T d1u0ma1 154 YPEANALIV 162 (200)
T ss_dssp STTCEEEEE
T ss_pred CCCCEEEEE
Confidence 656666543
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.17 E-value=0.042 Score=43.49 Aligned_cols=83 Identities=12% Similarity=-0.058 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceee-----EcccCCcHHHHHHHHHHHH
Q 015576 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT-----INKVCSSGMKAVMLAAQSI 113 (404)
Q Consensus 39 ~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~-----v~~aCas~~~al~~A~~~I 113 (404)
....++++++|+++|++++|||.++.=. .+...-..++..+|+++.....+ -+.+++|-..+|..+...=
T Consensus 48 ~~v~~~i~~~L~~~gl~~~dId~~i~Hq-----a~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~~g 122 (148)
T d1u6ea2 48 FKMGDVGRRAMDAAGVRPDQIDVFVPHQ-----ANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTG 122 (148)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECC-----SCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCcccccEEEecc-----ccHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHHcC
Confidence 4556788999999999999999987622 23345678889999975433322 1223333445666665542
Q ss_pred HcCCCCeEEEecc
Q 015576 114 QLGINDIVVAGGM 126 (404)
Q Consensus 114 ~aG~~~~vLv~g~ 126 (404)
+-..-|.++++|+
T Consensus 123 ~i~~Gd~vll~gf 135 (148)
T d1u6ea2 123 AAKPGDLALLIGY 135 (148)
T ss_dssp SSCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEE
Confidence 2223467776653
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=94.95 E-value=0.031 Score=45.44 Aligned_cols=75 Identities=15% Similarity=0.098 Sum_probs=47.7
Q ss_pred chHHHHHHHHHHcCCCCCCcceEeec-----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHHHHHHHHHHH
Q 015576 303 APSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (404)
Q Consensus 303 ~~~~a~~~al~~agl~~~dId~~~~h-----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~~l 377 (404)
....|++++|+++|++++|||++.+. ...+.....+.+.||... ..+....+++|...-.+....+
T Consensus 52 ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~~---------~~~di~~~C~g~~~al~~a~~~ 122 (172)
T d1ub7a1 52 LAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKA---------FAYDLLAGCPGWIYALAQAHAL 122 (172)
T ss_dssp HHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCCC---------EEEEEECSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccCc---------cceeehhccccHHHHHHHHhhh
Confidence 34689999999999999999999753 223344556677898422 2344455677766444444444
Q ss_pred Hhc-CCceeE
Q 015576 378 RHK-KGKYGV 386 (404)
Q Consensus 378 ~~~-~~~~gl 386 (404)
... ..++.|
T Consensus 123 ~~~~~~~~~L 132 (172)
T d1ub7a1 123 VEAGLAQKVL 132 (172)
T ss_dssp HHTTSCSEEE
T ss_pred hhcCCcceeE
Confidence 433 345554
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.78 E-value=0.04 Score=50.57 Aligned_cols=78 Identities=22% Similarity=0.219 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCCCCCCcceEeecc----cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHHHh
Q 015576 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVLRH 379 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~hd----~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l~~ 379 (404)
.+|++++|+++|++++|||++...- ..+.....+.+.||+...-.... ..+ .||+|.. .+-.+...++.
T Consensus 97 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~-----~~~-~gC~g~~~aL~~A~~~l~s 170 (372)
T d1teda_ 97 VDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVV-----VNF-MGCAAAMNALGTATNYVRA 170 (372)
T ss_dssp HHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEE-----EES-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEee-----ccc-cCccHHHHHHHHHHHHHhc
Confidence 6899999999999999999997431 22344567788999865321110 111 2455544 55555566666
Q ss_pred cCCceeEEe
Q 015576 380 KKGKYGVGG 388 (404)
Q Consensus 380 ~~~~~gl~~ 388 (404)
...++.|+.
T Consensus 171 g~~~~~LVV 179 (372)
T d1teda_ 171 HPAMKALVV 179 (372)
T ss_dssp STTCEEEEE
T ss_pred CCCccceee
Confidence 667777654
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=94.42 E-value=0.065 Score=43.48 Aligned_cols=76 Identities=25% Similarity=0.310 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeec-----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~h-----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l 377 (404)
..+|++++|+++|++++|||++.+. +..+.....+.+.||+.. .. ++--..+++|.. .+-.+...+
T Consensus 55 a~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~--~~------~~di~~~C~g~~~al~~A~~~i 126 (174)
T d1hnja1 55 GFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG--CP------AFDVAAACAGFTYALSVADQYV 126 (174)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCS--SC------EEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCc--hh------hhhhhhhhccHHHHHHHHHHHH
Confidence 3689999999999999999999743 334556777788899853 11 122234566655 444444444
Q ss_pred HhcCCceeEE
Q 015576 378 RHKKGKYGVG 387 (404)
Q Consensus 378 ~~~~~~~gl~ 387 (404)
+.+..++.|+
T Consensus 127 ~sg~~~~~Lv 136 (174)
T d1hnja1 127 KSGAVKYALV 136 (174)
T ss_dssp HTTSCSEEEE
T ss_pred hcCCcceeEE
Confidence 4444566653
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=93.90 E-value=0.12 Score=44.13 Aligned_cols=76 Identities=24% Similarity=0.203 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHHHh
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVLRH 379 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l~~ 379 (404)
.+|++++|+++|++++|||++.+. +........+.+.+|+...-... .=+..|++|.. .+-.+...++.
T Consensus 107 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~------~~~~~~C~g~~~al~~A~~~i~~ 180 (235)
T d1bi5a1 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRY------MMYQQGCFAGGTVLRLAKDLAEN 180 (235)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEE------EEESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEE------eeecCccchHHHHHHHHHHHHHc
Confidence 689999999999999999999753 23334455666778765432111 11234566655 44444455555
Q ss_pred cCCceeE
Q 015576 380 KKGKYGV 386 (404)
Q Consensus 380 ~~~~~gl 386 (404)
...++.|
T Consensus 181 ~~~~~vL 187 (235)
T d1bi5a1 181 NKGARVL 187 (235)
T ss_dssp STTCEEE
T ss_pred CCCCeEE
Confidence 5556655
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=93.79 E-value=0.092 Score=41.38 Aligned_cols=83 Identities=16% Similarity=0.067 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc----ccCCcHHHHHHHHHHHHHc
Q 015576 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN----KVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 40 l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~----~aCas~~~al~~A~~~I~a 115 (404)
..-++++++|+++|++++|||.+++=. ........+...+|+++.....++. .+++|-..+|..+...=+-
T Consensus 48 ~vp~~i~~~L~~~g~~~~dId~~i~Hq-----a~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~~~ 122 (149)
T d1ub7a2 48 VMNTATLEAIEKAGLTPEDIRLFVPHQ-----ANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAGRI 122 (149)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECC-----SCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHhhccccccccEEEeec-----cchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcCCC
Confidence 455788999999999999999987521 2334667888899997643222222 2233333344444443222
Q ss_pred CCCCeEEEeccc
Q 015576 116 GINDIVVAGGME 127 (404)
Q Consensus 116 G~~~~vLv~g~e 127 (404)
..-|.+|++|+-
T Consensus 123 ~~Gd~vll~g~G 134 (149)
T d1ub7a2 123 REGDHVLLVSFG 134 (149)
T ss_dssp CTTCEEEEEEEE
T ss_pred CCCCEEEEEEEc
Confidence 334778877654
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=92.68 E-value=0.18 Score=39.37 Aligned_cols=83 Identities=12% Similarity=0.021 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc----ccCCcHHHHHHHHHHHHHc
Q 015576 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN----KVCSSGMKAVMLAAQSIQL 115 (404)
Q Consensus 40 l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~----~aCas~~~al~~A~~~I~a 115 (404)
...++++++|+++|++++|||.++.=. .....-..++..+|+++.....++. .+++|-..+|..+...=+-
T Consensus 45 ~~~~~i~~~L~~~g~~~~dId~~i~Hq-----~~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~~~~~ 119 (143)
T d1hnja2 45 ELAHIVDETLAANNLDRSQLDWLVPHQ-----ANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRI 119 (143)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECC-----SCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCS
T ss_pred hhhHHHHHHHHHhhhcccccceEEecc-----CchHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHHhCCC
Confidence 456788899999999999999987511 2334667888999997533222222 3334444455554443112
Q ss_pred CCCCeEEEeccc
Q 015576 116 GINDIVVAGGME 127 (404)
Q Consensus 116 G~~~~vLv~g~e 127 (404)
..-|.+|.+|+-
T Consensus 120 ~~Gd~vll~g~G 131 (143)
T d1hnja2 120 KPGQLVLLEAFG 131 (143)
T ss_dssp CTTCEEEEEEEE
T ss_pred CCCCEEEEEEEe
Confidence 233788877654
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=92.47 E-value=0.18 Score=41.01 Aligned_cols=75 Identities=19% Similarity=0.276 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecc-----cchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINE-----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd-----~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l 377 (404)
...|++++|+++|++++|||++.+.. ........+.+.||.... . ..-+ ..+++|.. .+-.+...+
T Consensus 62 a~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~~~--~----~~Dv--~~~C~g~~~aL~~A~~~i 133 (181)
T d1mzja1 62 GVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNA--G----GFDL--SAACAGFCHALSIAADAV 133 (181)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTC--E----EEEE--ECGGGHHHHHHHHHHHHH
T ss_pred hHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCCCc--c----ceeH--HhhhccHHHHHHHHhCHh
Confidence 47899999999999999999987532 223334455667775321 1 1112 23566655 444444455
Q ss_pred HhcCCceeE
Q 015576 378 RHKKGKYGV 386 (404)
Q Consensus 378 ~~~~~~~gl 386 (404)
+....++.|
T Consensus 134 ~~~~~~~~L 142 (181)
T d1mzja1 134 ESGGSRHVL 142 (181)
T ss_dssp HHSSCSCEE
T ss_pred hcCCCceeE
Confidence 554445554
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=92.18 E-value=0.2 Score=39.50 Aligned_cols=84 Identities=15% Similarity=-0.049 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCccee-eEc-cc-CCcHH--HHHHHHHHHH
Q 015576 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT-TIN-KV-CSSGM--KAVMLAAQSI 113 (404)
Q Consensus 39 ~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~-~v~-~a-Cas~~--~al~~A~~~I 113 (404)
....++++++|+++|++++|||.+++=. .+...-..++..+|++...... .+. .| |+|+. .+|..+...=
T Consensus 48 ~~vp~~i~~~L~~~gl~~~dId~~i~Hq-----~~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~~~~~~ 122 (153)
T d1mzja2 48 ADVVPAAREALEVAGLTVGDLVAFVPHQ-----ANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRSG 122 (153)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcccCCEEEEcC-----CcHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHHHHHcC
Confidence 4556678899999999999999987511 2344667888899997543211 122 23 33332 3344443321
Q ss_pred HcCCCCeEEEeccc
Q 015576 114 QLGINDIVVAGGME 127 (404)
Q Consensus 114 ~aG~~~~vLv~g~e 127 (404)
+-..-|.+|++++-
T Consensus 123 ~~~~Gd~ill~~fG 136 (153)
T d1mzja2 123 AVPGGGPALMIGFG 136 (153)
T ss_dssp SSCTTCEEEEEEEE
T ss_pred CCCCCCEEEEEEEc
Confidence 11223777776643
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=90.76 E-value=0.5 Score=39.54 Aligned_cols=92 Identities=11% Similarity=-0.036 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHcCCCCCCcceEeecccchHHHHHHHHHhCCCCC---------CcCCCC-CccccCCcccchHHHHHHHH
Q 015576 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE---------QVNAHG-GAVSLGHPLGCSGARILVTL 373 (404)
Q Consensus 304 ~~~a~~~al~~agl~~~dId~~~~hd~~~~~~~~~~e~lg~~~~---------~vn~~G-g~~~~Gh~~gasG~~~l~~~ 373 (404)
...+++...++.|.+++|+|++.+|.+|+.+.....+.|..... .+-++- -..-+|+...+|=...|+.+
T Consensus 42 l~~~~~~~~~~~g~~~~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iGN~YTaSlyl~L~Sl 121 (221)
T d1xpma2 42 FQQSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISL 121 (221)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCChhhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcCCcchHHHHHHHHhh
Confidence 35677777889999999999999999999998888777754321 010000 01236999999977788887
Q ss_pred HHHHHhcCCceeEEeeeccccce
Q 015576 374 LGVLRHKKGKYGVGGICNGGGGA 396 (404)
Q Consensus 374 ~~~l~~~~~~~gl~~~~~~gG~~ 396 (404)
+..-...+|++-+.. .-|.|..
T Consensus 122 l~~~~~~~G~rIglf-SYGSG~~ 143 (221)
T d1xpma2 122 LENRDLQAGETIGLF-SYGSGSV 143 (221)
T ss_dssp HHHSCCCTTCEEEEE-EEETTTE
T ss_pred hccccCCCCCEEEEE-EecCCcc
Confidence 765433356554433 3344443
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=81.90 E-value=0.48 Score=37.60 Aligned_cols=90 Identities=20% Similarity=0.232 Sum_probs=55.1
Q ss_pred HHHHHHHHHHcCCCCCCcceEeec-----ccchHHHHHHHHHhCCCCCCcCCCCCccccCCcccchHHH-HHHHHHHHHH
Q 015576 305 SLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVLR 378 (404)
Q Consensus 305 ~~a~~~al~~agl~~~dId~~~~h-----d~~~~~~~~~~e~lg~~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~~l~ 378 (404)
..|+++++++.+ ++|||++.+. +............||+... ...+-+..+++|.. .+-.+...++
T Consensus 55 ~~Aa~~al~~~~--~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~-------~~~~dv~~~C~g~~~al~~A~~~i~ 125 (166)
T d1xpma1 55 ANAAKDIITDED--KKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPF-------ARCFEMKEACYAATPAIQLAKDYLA 125 (166)
T ss_dssp HHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSS-------CEEEEEESTTTTHHHHHHHHHHHHT
T ss_pred HHHHHhhhcccc--CCCCCeEEEeccccccccchhHHHHHHhhccccc-------eEEeeecccHHHHHHHHHHHhhHHh
Confidence 567777777654 7899998853 3344556666777887542 12344555667655 4555555566
Q ss_pred hcCCceeEEeee-------------ccccceeeeEEEe
Q 015576 379 HKKGKYGVGGIC-------------NGGGGASALVLEL 403 (404)
Q Consensus 379 ~~~~~~gl~~~~-------------~~gG~~~a~ll~~ 403 (404)
....+++|+... .+|..+.|+||++
T Consensus 126 ~~~~~~alvV~sd~~~~~~~~~~~~~fGDGA~A~ll~~ 163 (166)
T d1xpma1 126 TRPNEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAH 163 (166)
T ss_dssp TCTTCEEEEEEEEEECCCTTCSSGGGCEEEEEEEEEEE
T ss_pred cCCCCeEEEEEEceEeccCCCCCCccCCCeeEEEEEec
Confidence 566677764433 2344667778774
|
| >d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: YeaZ-like domain: Hypothetical protein YeaZ species: Escherichia coli [TaxId: 562]
Probab=80.06 E-value=0.32 Score=35.68 Aligned_cols=59 Identities=10% Similarity=0.030 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeccCCCCCCcHHHHHHHHCCCCCCcceeeEc
Q 015576 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN 96 (404)
Q Consensus 38 ~~l~~~A~~~AL~~agi~~~~id~li~g~~~~~~~~~~~a~~i~~~lGl~~~~~~~~v~ 96 (404)
.+.....++++|++++++++|||.++++.--+.+.|--.+.-++..+.+..+.|.+.++
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~di~~i~v~~GPGsfTglRig~s~akgla~~~~ip~~~v~ 92 (106)
T d1okja1 34 TQRILPMVQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVS 92 (106)
T ss_dssp TTTHHHHHHHHHHHTTCCGGGCCEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCcceeeeEEEEeeccCccccchHHHHHHHHHHHHcCCCEEEeC
Confidence 34556678999999999999999999987755443322222222222222245677664
|