Query 015577
Match_columns 404
No_of_seqs 142 out of 256
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 15:02:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015577.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015577hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ahq_A ERO1-like protein alpha 100.0 2E-124 8E-129 961.0 2.7 329 53-392 27-418 (465)
2 3m31_A Endoplasmic oxidoreduct 100.0 2E-112 6E-117 853.9 10.2 308 69-393 7-341 (388)
3 3qrx_B Melittin; calcium-bindi 27.8 18 0.0006 23.0 0.7 11 378-388 1-11 (26)
4 2rng_A BIG defensin; alpha-hel 24.1 13 0.00044 29.6 -0.6 55 19-90 14-68 (79)
5 2wfu_A Probable insulin-like p 22.5 17 0.00059 23.3 -0.1 15 72-86 1-18 (26)
6 1pid_A Despentapeptide insulin 22.1 17 0.00059 23.3 -0.2 15 72-86 1-18 (26)
7 2k72_A Matrix metalloproteinas 19.4 14 0.00047 24.8 -1.1 18 110-127 4-21 (37)
8 2wfv_A Probable insulin-like p 17.8 22 0.00074 22.8 -0.4 16 71-86 3-21 (26)
9 3vmt_A Monofunctional glycosyl 16.2 77 0.0026 30.4 2.8 25 13-37 27-51 (263)
10 3s8f_B Cytochrome C oxidase su 15.1 1.1E+02 0.0038 27.1 3.4 19 22-40 17-35 (168)
No 1
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A*
Probab=100.00 E-value=2.4e-124 Score=961.01 Aligned_cols=329 Identities=38% Similarity=0.708 Sum_probs=259.8
Q ss_pred CCCCcccccCCCCCCccccccccCcccchhhhhhhhhchhhHHhHHhhcCCCceEEeccCCCCCCCCCCCCCCCCCCccc
Q 015577 53 NNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSV 132 (404)
Q Consensus 53 ~~~~~c~c~~~~~~~~~~~G~vdDc~c~~etId~~N~~~i~P~L~~L~~t~fFRyfKVNL~~~CPFW~dd~~C~~~~C~V 132 (404)
+..+.|||+ ++|+|+||||+|+|||++|+++|+|+|++|+++||||||||||+++||||+|+++|++++|+|
T Consensus 27 ~~~~~c~c~--------~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V 98 (465)
T 3ahq_A 27 TAAQRCFCQ--------VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAV 98 (465)
T ss_dssp ----CEEEE--------CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC------------
T ss_pred CCCCCcccC--------CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCee
Confidence 456789999 999999999999999999998899999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCc----cccccCCCCcccccccc---hhhhcCccccCCC---CCCCCCCCCCCceEeeC
Q 015577 133 CECPENEFPEPFKKPFHILPSDD----LMCQEGKPEATVDRTLD---KRAFRGWIETDNP---WTNDDETDNGEMTYVNL 202 (404)
Q Consensus 133 ~~c~e~eiP~~wr~~~~~~~~~~----~~c~~~~~~~~vd~~l~---~~~~~~w~~~d~~---~~~~De~~~~~~~YVDL 202 (404)
++|+|+|||++||++..+++... ..|++...++.||++++ ..+|.+|.++|++ +|..||+++++++||||
T Consensus 99 ~~c~e~eiP~~wr~~~~~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdL 178 (465)
T 3ahq_A 99 KPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDL 178 (465)
T ss_dssp ------------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEG
T ss_pred ecCCcccCChhhcccccccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEec
Confidence 99999999999999764443221 25776677889999888 3678999998764 45544446789999999
Q ss_pred CCCCCCCCCCCCCChhhhHHHHHhhcCCCCCC------------------------CCCC------------CCCCccCC
Q 015577 203 LLNPERYTGYTGPSARRIWDAVYTENCPKWMA------------------------IVPA------------NPQTRPNP 246 (404)
Q Consensus 203 l~NPERyTGY~G~~A~rIW~aIY~ENCF~~~~------------------------~~~C------------LHsSIsiH 246 (404)
++||||||||+|++|+|||++||+||||++.+ +++| ||||||||
T Consensus 179 l~NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~H 258 (465)
T 3ahq_A 179 LLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVH 258 (465)
T ss_dssp GGSCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHH
T ss_pred ccCcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998642 4788 99999999
Q ss_pred CCCC----C---CCCCCCChHHHHHHH------hhhcchhhhHHHHHHHHHHHHHHhhhhhhhhcc--CCCCccccHHHH
Q 015577 247 PAKT----R---PLRWGKNPELMYDRV------LRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEY--DTGNHEDDLKTV 311 (404)
Q Consensus 247 l~~~----~---~~~wgpNl~~F~~Rv------~~~PeRl~NLYF~Y~~vLRAl~Ka~p~L~~~~f--~tGn~~eD~~t~ 311 (404)
||++ . ++.||||+++|++|| |+|||||+||||+|++|||||+||+|||.++.| +|||..+|.+|+
T Consensus 259 l~~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk 338 (465)
T 3ahq_A 259 LSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENK 338 (465)
T ss_dssp HHHTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHH
T ss_pred HHHHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHH
Confidence 9998 3 899999999999997 579999999999999999999999999997666 999999999999
Q ss_pred HHHHHHhcCccccccCCCCcccccccCCC--CcchHHHHHHHHHhhhhhhhcCccCCccccchhhhhHHHHHHHHHhcCc
Q 015577 312 SLMKQLLYNPKLQAACPLPFDEAKLWQGQ--SGPELKQQIQEQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSV 389 (404)
Q Consensus 312 ~ll~~Ll~~~~l~~sc~~~FDE~~lF~~~--~~~~LK~efr~~FrNISrIMDCVgCeKCRLWGKLQt~GLgTALKILFs~ 389 (404)
++|.+||+.. .+||.+|||+.||++. .+.+||+|||+|||||||||||||||||||||||||+||||||||||+.
T Consensus 339 ~~l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCVgCdKCRLWGKLQt~GlgTALKILF~~ 415 (465)
T 3ahq_A 339 MLLLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSE 415 (465)
T ss_dssp HHHHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCCccchhhhhhHHHHHHHHHHHHHHhcc
Confidence 9999999863 4799999999999984 6789999999999999999999999999999999999999999999997
Q ss_pred CcC
Q 015577 390 EGQ 392 (404)
Q Consensus 390 ~~~ 392 (404)
++.
T Consensus 416 ~~~ 418 (465)
T 3ahq_A 416 KLI 418 (465)
T ss_dssp HHH
T ss_pred Ccc
Confidence 764
No 2
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A*
Probab=100.00 E-value=1.7e-112 Score=853.89 Aligned_cols=308 Identities=28% Similarity=0.566 Sum_probs=254.3
Q ss_pred cccccccCcccchhhhhhhhhchhhHHhHHhhcCCCceEEeccCCCCCCCCCC-CCCCCCCCcccccCCC-CCCCCCCCC
Q 015577 69 KYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPD-DGMCRLRDCSVCECPE-NEFPEPFKK 146 (404)
Q Consensus 69 ~~~G~vdDc~c~~etId~~N~~~i~P~L~~L~~t~fFRyfKVNL~~~CPFW~d-d~~C~~~~C~V~~c~e-~eiP~~wr~ 146 (404)
.-+|.|. |++|+|||++|.+ |+|+|++|+++||||||||||+++||||+| +++|++++|+|++|++ ++||++||+
T Consensus 7 ~~~~~~~--~~~~~~i~~~N~~-i~p~L~~L~~tdfFryfKVnL~k~CPFW~d~~~~C~~~~CaV~~cd~~~~iP~~w~~ 83 (388)
T 3m31_A 7 HSSGLVP--RGSFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQP 83 (388)
T ss_dssp ----------CHHHHHHHHHHH-HHHHHHHHTTSTTTSEEEEESCCCCSSSCCSSCCCCTTTTBCC----CTTSCGGGSH
T ss_pred ccCCCCC--CCCHHHHHHHHHH-HHHHHHHHhcCCCceeeeecCCCCCCCCCCcCCCCCCCCCeeeeCCCcccCchhhcc
Confidence 3577776 5689999999996 899999999999999999999999999998 8999999999999997 999999997
Q ss_pred CC-CCCCCC--------ccccccCCCCcccccccchhhhcCccccCCCCCCCCCCCCCCceEeeCCCCCCCCCCCCCCCh
Q 015577 147 PF-HILPSD--------DLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSA 217 (404)
Q Consensus 147 ~~-~~~~~~--------~~~c~~~~~~~~vd~~l~~~~~~~w~~~d~~~~~~De~~~~~~~YVDLl~NPERyTGY~G~~A 217 (404)
+. ++++.. ...|.....+..+++.+ .+...++.||+.||+++++++||||++||||||||+|++|
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~------~~~d~~~~~c~~dD~~~~~~~YVdLl~NPEryTGY~G~~a 157 (388)
T 3m31_A 84 EILGSFNNDTMKEADDSDDECKFLDQLAQTSKKP------VDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQA 157 (388)
T ss_dssp HHHTCCCTTTCEECCTTCGGGSBHHHHC-------------------CHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHH
T ss_pred ccccCccccccccccccchhhhhhhhhccccccc------ccccCcCCeecccccCCCCceEeecccCCccccCCCCCch
Confidence 54 222211 11232211111111111 0112345677766667899999999999999999999999
Q ss_pred hhhHHHHHhhcCCCCCCCCCC------------CCCCccCCCCCC----CCCCCCCChHHHHHHHhhhcchhhhHHHHHH
Q 015577 218 RRIWDAVYTENCPKWMAIVPA------------NPQTRPNPPAKT----RPLRWGKNPELMYDRVLRYQDRVRNLYFTFL 281 (404)
Q Consensus 218 ~rIW~aIY~ENCF~~~~~~~C------------LHsSIsiHl~~~----~~~~wgpNl~~F~~Rv~~~PeRl~NLYF~Y~ 281 (404)
++||++||+||||++...++| |||||+||||++ .++.||||+++|++|||+|||||+||||+|+
T Consensus 158 ~~IW~aIY~ENCF~~~~~~~ClEkrvFyrLISGlHaSIs~Hl~~~yl~~~~~~w~pNl~~F~~R~g~~P~Rl~NLYF~Y~ 237 (388)
T 3m31_A 158 GQIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYA 237 (388)
T ss_dssp HHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEECTTTCCEECCHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCcccccHHHHHHHHHhhhhHHHHHHHHHHHHhCccCCCcCCCHHHHHHHHccchhHHHHHHHHHH
Confidence 999999999999998888888 999999999998 6799999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhccCCCCccccHHHHHHHHHHhcCccccccCCCCcccccccCCCCcchHHHHHHHHHhhhhhhhc
Q 015577 282 FVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNISALMD 361 (404)
Q Consensus 282 ~vLRAl~Ka~p~L~~~~f~tGn~~eD~~t~~ll~~Ll~~~~l~~sc~~~FDE~~lF~~~~~~~LK~efr~~FrNISrIMD 361 (404)
+|||||+||+|||.+++|+| .+|..|+++|.+|++. .+|.+|||+.||+++.+..||+|||+||||||||||
T Consensus 238 l~lRAl~K~~p~l~~~~~~~---~~d~d~k~~~~~l~~~-----~~~~~FDE~~lF~~~~a~~LKeefr~~FrNISrIMD 309 (388)
T 3m31_A 238 VVAKALWKIQPYLPEFSFAD---LVNKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMD 309 (388)
T ss_dssp HHHHHHHHHGGGCCCSCSSC---HHHHHHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhhccCCc---cccHHHHHHHHHHHHH-----hCcCCCCHHHhcCCCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998 4688889999999864 357899999999999999999999999999999999
Q ss_pred CccCCccccchhhhhHHHHHHHHHhcCcCcCC
Q 015577 362 CVGCEKCRLWGKLQVLGLGTALKILFSVEGQN 393 (404)
Q Consensus 362 CVgCeKCRLWGKLQt~GLgTALKILFs~~~~~ 393 (404)
||||+||||||||||+||||||||||+.++.+
T Consensus 310 CVgCeKCRLWGKLQt~GlgTALKILF~~~~~~ 341 (388)
T 3m31_A 310 CVQCDRCRLWGKIQTTGYATALKILFEINDAD 341 (388)
T ss_dssp GCCSHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccCcchheeehhhhHHHHHHHHHHHhcCcccc
Confidence 99999999999999999999999999987654
No 3
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=27.83 E-value=18 Score=23.01 Aligned_cols=11 Identities=45% Similarity=0.918 Sum_probs=9.3
Q ss_pred HHHHHHHHhcC
Q 015577 378 GLGTALKILFS 388 (404)
Q Consensus 378 GLgTALKILFs 388 (404)
|+|.|||+|-.
T Consensus 1 giGa~LKVLa~ 11 (26)
T 3qrx_B 1 GIGAVLKVLTT 11 (26)
T ss_pred CchHHHHHHHc
Confidence 78999999854
No 4
>2rng_A BIG defensin; alpha-helices & beta-sheets, three disulfide bridges, antibiotic, antimicrobial, fungicide, secreted; NMR {Tachypleus tridentatus} PDB: 2rq2_A
Probab=24.07 E-value=13 Score=29.61 Aligned_cols=55 Identities=20% Similarity=0.225 Sum_probs=33.7
Q ss_pred cCCcchHHHHHHHHHHHHHhhhhcccCcccccccCCCCcccccCCCCCCccccccccCcccchhhhhhhhhc
Q 015577 19 GLGRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGE 90 (404)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~G~vdDc~c~~etId~~N~~ 90 (404)
++..|.|+|++.-+..|+.+.++..+ +++.+|-= --|--..-|++.|.+|..|+.
T Consensus 14 sp~V~~~Lv~~yGaaAVt~~~i~~~~--------~DshsCan---------nrGWCR~~Cfs~Ey~D~~~s~ 68 (79)
T 2rng_A 14 GPSVWAYLVALVGAAAVTAANIRRAS--------SDNHSCAG---------NRGWCRSKCFRHEYVDTYYSA 68 (79)
T ss_dssp CHHHHHHHHHHSCHHHHHHTTEEECS--------SSCCEETT---------TTEEEESSCCTTCEECTTTHH
T ss_pred CHHHHHHHHHHHhHHHHHHhheeecc--------CCcccccc---------cCCcccchhcceeeecccCCc
Confidence 34568888876666555555554442 34444432 255555667888888888764
No 5
>2wfu_A Probable insulin-like peptide 5 A chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster}
Probab=22.47 E-value=17 Score=23.31 Aligned_cols=15 Identities=40% Similarity=1.336 Sum_probs=10.9
Q ss_pred ccccCcc---cchhhhhh
Q 015577 72 GMVEDCC---CDYETVDS 86 (404)
Q Consensus 72 G~vdDc~---c~~etId~ 86 (404)
|+||.|| |++..+.+
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 2wfu_A 1 GVVDSCCRNSCSFSTLRA 18 (26)
T ss_dssp CHHHHHTSSCBCHHHHHH
T ss_pred CcchhhcCCcCCHHHHHH
Confidence 7889988 66666554
No 6
>1pid_A Despentapeptide insulin; hormone, glucose metabolism; 1.30A {Bos taurus} SCOP: g.1.1.1 PDB: 1bph_A 1aph_A 1dph_A 1cph_A 2a3g_A 2bn1_A 2ins_A 2zp6_A 4e7t_A 4e7u_A 4e7v_A 2bn3_A 2qiu_A 2r34_A 2r35_A 2r36_A 1a7f_A 1ai0_A* 1aiy_A* 1b17_A ...
Probab=22.10 E-value=17 Score=23.32 Aligned_cols=15 Identities=40% Similarity=1.214 Sum_probs=10.8
Q ss_pred ccccCcc---cchhhhhh
Q 015577 72 GMVEDCC---CDYETVDS 86 (404)
Q Consensus 72 G~vdDc~---c~~etId~ 86 (404)
|+||.|| |++..+.+
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 1pid_A 1 GIVEQCCASVCSLYQLEN 18 (26)
T ss_dssp CHHHHHTTSCCCHHHHHT
T ss_pred CcchhhCCCcCCHHHHHH
Confidence 7889988 66666554
No 7
>2k72_A Matrix metalloproteinase-23; toxin, metalloprotease, MMP23, potassium channel, cleavage on PAIR of basic residues, glycoprotein, hydrolase; NMR {Synthetic}
Probab=19.42 E-value=14 Score=24.76 Aligned_cols=18 Identities=22% Similarity=0.672 Sum_probs=15.0
Q ss_pred ccCCCCCCCCCCCCCCCC
Q 015577 110 AKLWCDCPFWPDDGMCRL 127 (404)
Q Consensus 110 VNL~~~CPFW~dd~~C~~ 127 (404)
+|....|+||...|.|..
T Consensus 4 ~D~~~~C~~Wa~~G~C~~ 21 (37)
T 2k72_A 4 LDRIFVCTSWARKGFCDV 21 (37)
T ss_dssp CCCCSCHHHHHTTTTTTT
T ss_pred cCcchhhHHHHhCCccCC
Confidence 466789999999999974
No 8
>2wfv_A Probable insulin-like peptide 5 A chain; signaling protein, cleavage on PAIR of basic residues; 1.85A {Drosophila melanogaster}
Probab=17.83 E-value=22 Score=22.81 Aligned_cols=16 Identities=38% Similarity=1.248 Sum_probs=11.5
Q ss_pred cccccCcc---cchhhhhh
Q 015577 71 TGMVEDCC---CDYETVDS 86 (404)
Q Consensus 71 ~G~vdDc~---c~~etId~ 86 (404)
.|+||.|| |++..+.+
T Consensus 3 rGIvdECC~~~Ct~~~L~~ 21 (26)
T 2wfv_A 3 RGVVDSCCRNSCSFSTLRA 21 (26)
T ss_dssp CHHHHHHTSSCBCHHHHHH
T ss_pred CcchhhhcCCcCCHHHHHH
Confidence 49999998 66665543
No 9
>3vmt_A Monofunctional glycosyltransferase; transmembrane, bacterial cell WALL SYNT membrane; HET: LHI; 2.30A {Staphylococcus aureus} PDB: 3vmr_A* 3vms_A 3vmq_A*
Probab=16.22 E-value=77 Score=30.40 Aligned_cols=25 Identities=20% Similarity=0.159 Sum_probs=11.4
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHH
Q 015577 13 KEKKKKGLGRGLWSVWAVIVVLFAT 37 (404)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (404)
.++||++.+-|+|++++++++++++
T Consensus 27 ~~kk~~~~~~~~~~~~~~l~~~~~~ 51 (263)
T 3vmt_A 27 PPKKKKSKRILLKILLTILIIIALF 51 (263)
T ss_dssp --------CCTTHHHHHHHHHHHHH
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4556677777899777665555544
No 10
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=15.14 E-value=1.1e+02 Score=27.12 Aligned_cols=19 Identities=26% Similarity=0.104 Sum_probs=13.5
Q ss_pred cchHHHHHHHHHHHHHhhh
Q 015577 22 RGLWSVWAVIVVLFATAAV 40 (404)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~ 40 (404)
+|.++++++|++++++.+.
T Consensus 17 ~w~~~~~~~~~~f~~~~~~ 35 (168)
T 3s8f_B 17 GWLAFSLAMLFVFIALIAY 35 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4888888888877776433
Done!