Query 015578
Match_columns 404
No_of_seqs 127 out of 361
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 15:03:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015578.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015578hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 98.7 1.4E-08 4.7E-13 97.0 7.1 199 2-269 56-265 (279)
2 3hve_A Gigaxonin; ubiquitin, c 98.5 8.3E-08 2.8E-12 90.3 6.2 151 2-185 52-207 (256)
3 2vkp_A BTB/POZ domain-containi 98.5 2.3E-07 7.7E-12 76.0 6.2 76 2-86 33-108 (109)
4 1buo_A POZ domain, protein (pr 98.4 2.7E-07 9.2E-12 77.5 6.2 73 2-87 49-121 (121)
5 2if5_A Zinc finger and BTB dom 98.4 3.7E-07 1.3E-11 76.2 5.7 75 2-84 46-120 (120)
6 3b84_A Zinc finger and BTB dom 98.4 3.1E-07 1.1E-11 77.0 4.9 73 2-86 45-117 (119)
7 3htm_A Speckle-type POZ protei 98.3 7.8E-07 2.7E-11 78.1 7.4 105 2-123 55-162 (172)
8 2vpk_A Myoneurin; transcriptio 98.3 8.6E-07 3E-11 73.6 6.2 72 2-85 43-116 (116)
9 1r29_A B-cell lymphoma 6 prote 98.3 1.2E-06 4.2E-11 73.8 6.7 75 2-85 50-125 (127)
10 2ppi_A Gigaxonin; BTB domain, 98.2 1.1E-06 3.7E-11 76.5 5.7 75 2-84 68-144 (144)
11 2yy9_A Zinc finger and BTB dom 98.2 5.7E-07 1.9E-11 77.2 3.5 74 2-87 46-119 (135)
12 2z8h_A Transcription regulator 98.2 2.1E-06 7.1E-11 73.8 6.8 76 2-87 57-133 (138)
13 3ga1_A Nucleus accumbens-assoc 98.2 5.2E-07 1.8E-11 76.6 2.8 73 2-86 54-127 (129)
14 2q81_A MIZ-1 protein; BTB/POZ 98.2 1E-06 3.4E-11 73.9 4.5 70 2-84 48-117 (119)
15 4eoz_A Speckle-type POZ protei 98.2 5.6E-07 1.9E-11 76.8 2.2 93 2-111 46-138 (145)
16 3ohu_A Transcription regulator 98.1 1.2E-06 4.2E-11 73.6 3.0 63 2-68 53-116 (125)
17 2ihc_A Transcription regulator 97.9 3.6E-06 1.2E-10 70.9 2.5 73 2-84 50-123 (124)
18 3m5b_A Zinc finger and BTB dom 97.8 1.1E-05 3.7E-10 68.1 4.1 57 21-85 61-117 (119)
19 3hqi_A Speckle-type POZ protei 97.8 2.1E-05 7.1E-10 75.9 6.1 106 2-124 195-303 (312)
20 3fkc_A Transcriptional regulat 97.8 1.7E-05 5.8E-10 66.3 4.6 60 2-68 52-112 (116)
21 4ajy_C Transcription elongatio 96.5 0.0042 1.4E-07 50.5 5.9 62 2-65 22-96 (97)
22 2ast_A S-phase kinase-associat 96.4 0.002 6.8E-08 57.0 3.9 79 2-88 21-127 (159)
23 1fs1_B SKP1, cyclin A/CDK2-ass 94.0 0.047 1.6E-06 47.3 4.4 74 2-87 22-121 (141)
24 2p1m_A SKP1-like protein 1A; F 93.9 0.017 6E-07 51.1 1.4 94 2-106 24-145 (160)
25 3v7d_A Suppressor of kinetocho 86.0 0.94 3.2E-05 40.3 5.3 78 2-87 27-133 (169)
26 2fnj_C Transcription elongatio 84.6 0.59 2E-05 37.7 3.0 63 2-66 21-96 (96)
27 1hv2_A Elongin C, ELC1; protei 78.7 1.1 3.8E-05 36.3 2.6 62 2-66 24-99 (99)
28 1vcb_B Protein (elongin C); tu 69.6 1.8 6.2E-05 36.0 1.7 63 2-66 37-112 (112)
29 1vjh_A BET V I allergen family 53.9 6.5 0.00022 32.7 2.4 41 334-387 82-122 (122)
30 1pd7_B MAD1; PAH2, SIN3, eukar 41.1 9.7 0.00033 23.9 1.1 17 52-68 3-19 (26)
31 3b0b_C CENP-X, centromere prot 37.0 14 0.00048 29.2 1.7 42 301-345 7-48 (81)
32 3ie5_A Phenolic oxidative coup 22.0 32 0.0011 30.2 1.5 36 345-388 128-163 (165)
33 3lvg_A Clathrin heavy chain 1; 21.1 34 0.0012 36.2 1.7 34 350-388 334-367 (624)
34 2eqx_A Kelch repeat and BTB do 20.5 71 0.0024 25.3 3.2 34 47-86 6-39 (105)
35 4a8u_A Major pollen allergen B 20.1 37 0.0013 29.4 1.5 16 373-388 142-157 (159)
36 4dra_E Centromere protein X; D 20.0 29 0.001 27.6 0.7 42 301-345 11-52 (84)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.72 E-value=1.4e-08 Score=97.03 Aligned_cols=199 Identities=11% Similarity=0.147 Sum_probs=132.3
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCC----CCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENF----PGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLIS 77 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~df----PGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ 77 (404)
++|.||+.++...-.+....+|.|+++ ...+++|+.+.+|+|++++.+++.||..+..||.+|+|.+ |..
T Consensus 56 a~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~ 129 (279)
T 3i3n_A 56 AATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIR------LKE 129 (279)
T ss_dssp HHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHH------HHH
T ss_pred HcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHH------HHH
Confidence 478999999875432224458889877 4578999999999999999999999999999999999985 999
Q ss_pred HHHHHhhhhhccChHHHHHHHhhhccccchhhhhh---hHHHHHHHHHHHhccCCCcccccccCCCceehhccccChHHH
Q 015578 78 KTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHF 154 (404)
Q Consensus 78 ~tE~fL~~~v~~sW~dsi~vL~sc~~llp~AE~l~---Iv~RCidsla~ka~~~~~~~~~~~~~~dWW~eDl~~L~~~~f 154 (404)
..+.||.+.+-. . .|-.++.+|+..+ +..+|.+-|...... + +--++...|+.+..
T Consensus 130 ~c~~~L~~~l~~--~-------n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~-------v-----~~~~~f~~L~~~~l 188 (279)
T 3i3n_A 130 FCGEFLKKKLHL--S-------NCVAIHSLAHMYTLSQLALKAADMIRRNFHK-------V-----IQDEEFYTLPFHLI 188 (279)
T ss_dssp HHHHHHHHHCCT--T-------THHHHHHHHHHTTCHHHHHHHHHHHHHTHHH-------H-----TTSSGGGGSCHHHH
T ss_pred HHHHHHHHcCCc--c-------hHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-------H-----hcCcChhcCCHHHH
Confidence 999999986532 2 3444445555543 677888777644310 0 01155668888777
Q ss_pred HHHHHHHHhcC--CC-chhHHHHHHHHHHhhcCCCccccccccCCCCCCcchhhhhhccCCcccccchhhhHHHHHHHHH
Q 015578 155 MRIITTIKVKG--TK-PEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVN 231 (404)
Q Consensus 155 ~rvi~am~~~g--~~-~~~i~~~L~~Ya~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qr~llE~iv~ 231 (404)
..++. +.. ++ +..|-.+++.|+ ..- ....+..+. .
T Consensus 189 ~~lL~---~d~L~v~sE~~vf~av~~W~----~~~--------------------------------~~~r~~~~~---~ 226 (279)
T 3i3n_A 189 RDWLS---DLEITVDSEEVLFETVLKWV----QRN--------------------------------AEERERYFE---E 226 (279)
T ss_dssp HHHHT---CSSCCCSCHHHHHHHHHHHH----HTT--------------------------------HHHHTTTHH---H
T ss_pred HHHhc---CcCCCCCCHHHHHHHHHHHH----HcC--------------------------------HHHHHHHHH---H
Confidence 66654 332 33 455777765544 320 001112222 3
Q ss_pred hCCCCC-CcccHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 015578 232 LLPHQD-EGVSCKFFLQMLKMAMVYNASPALISELEKRV 269 (404)
Q Consensus 232 LLP~e~-~~vsc~fLf~LLr~a~~l~as~~cr~~LE~rI 269 (404)
||..=| ..+|..+|..+++..-.+..++.|+.-+..-.
T Consensus 227 ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~ 265 (279)
T 3i3n_A 227 LFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAV 265 (279)
T ss_dssp HHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHH
Confidence 443333 34889999999888888888999998876543
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.53 E-value=8.3e-08 Score=90.32 Aligned_cols=151 Identities=15% Similarity=0.206 Sum_probs=98.4
Q ss_pred ccccHHHHHHcCCCC--CCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHH
Q 015578 2 SKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (404)
Q Consensus 2 SkSg~l~rl~~~~~~--~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~t 79 (404)
++|.||+.++..... +....+|.|+|++ +++|+.+.+|+|++++.+++.||..+..||.+|+|.+ |....
T Consensus 52 a~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~------l~~~c 123 (256)
T 3hve_A 52 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC 123 (256)
T ss_dssp TTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHH------HHHHH
T ss_pred HcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHH------HHHHH
Confidence 579999999875332 1134588888874 8999999999999999999999999999999999995 99999
Q ss_pred HHHhhhhhccChHHHHHHHhhhccccchhhhhh---hHHHHHHHHHHHhccCCCcccccccCCCceehhccccChHHHHH
Q 015578 80 EAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMR 156 (404)
Q Consensus 80 E~fL~~~v~~sW~dsi~vL~sc~~llp~AE~l~---Iv~RCidsla~ka~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~r 156 (404)
+.||.+.+-. .. |-.++.+|+..+ +...|.+-|+.....= +--++...|+.+....
T Consensus 124 ~~~L~~~l~~--~n-------~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v------------~~~~~f~~L~~~~l~~ 182 (256)
T 3hve_A 124 CEFLEGCIAA--EN-------CIGIRDFALHYCLHHVHYLATEYLETHFRDV------------SSTEEFLELSPQKLKE 182 (256)
T ss_dssp HHHHHHTCCS--ST-------THHHHHHHHHTTCHHHHHHHHHHHHHHHHHH------------TTCHHHHSSCHHHHHH
T ss_pred HHHHHhhCCH--hh-------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH------------hCCcchhcCCHHHHHH
Confidence 9999986532 23 333444455443 6677777765443100 0125667889888877
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHhhcCC
Q 015578 157 IITTIKVKGTKPEIIGKCIMHYAKKWLPG 185 (404)
Q Consensus 157 vi~am~~~g~~~~~i~~~L~~Ya~~~l~~ 185 (404)
++..=.=.-.++..|-.+ +.+|+..
T Consensus 183 lL~~d~L~v~~E~~v~~a----v~~W~~~ 207 (256)
T 3hve_A 183 VISLEKLNVGNERYVFEA----VIRWIAH 207 (256)
T ss_dssp HHHCC-------CTTHHH----HTTTCCC
T ss_pred HHccCCCCCCCHHHHHHH----HHHHHHc
Confidence 765311111134455555 4677763
No 3
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.45 E-value=2.3e-07 Score=75.95 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=63.5
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~ 81 (404)
++|.||++++...-.+.. .+|.|+|+ .+++|+...+|+|++++.+++.|+..+..+|++++|.+ |...++.
T Consensus 33 ~~S~~F~~~f~~~~~e~~-~~i~l~~~--~~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------L~~~c~~ 103 (109)
T 2vkp_A 33 VGSSVFYAMFYGDLAEVK-SEIHIPDV--EPAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPA------LAKACVN 103 (109)
T ss_dssp HHCHHHHHHHC------C-CEEEETTS--CHHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHhcCCcccCC-CeEEeCCC--CHHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 489999999986433223 67888876 48999999999999999999999999999999999995 9999999
Q ss_pred Hhhhh
Q 015578 82 FLTLV 86 (404)
Q Consensus 82 fL~~~ 86 (404)
||.+.
T Consensus 104 ~l~~~ 108 (109)
T 2vkp_A 104 FLETS 108 (109)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99864
No 4
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.43 E-value=2.7e-07 Score=77.52 Aligned_cols=73 Identities=18% Similarity=0.266 Sum_probs=65.2
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~ 81 (404)
++|.||++++.. +..+|.|+|++ +++|+.+.+|+|++++.+++.|+..+..||++++|.+ |....+.
T Consensus 49 a~S~yF~~~f~~-----~~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~ 115 (121)
T 1buo_A 49 CTSKMFEILFHR-----NSQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEY------LEEQCLK 115 (121)
T ss_dssp HHCHHHHHHTTS-----CCSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHH------HHHHHHH
T ss_pred hcCHHHHHHHcC-----CCcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHH------HHHHHHH
Confidence 589999999975 23478888876 8999999999999999999999999999999999995 9999999
Q ss_pred Hhhhhh
Q 015578 82 FLTLVI 87 (404)
Q Consensus 82 fL~~~v 87 (404)
||.+.+
T Consensus 116 ~l~~~I 121 (121)
T 1buo_A 116 MLETIQ 121 (121)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998753
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.37 E-value=3.7e-07 Score=76.18 Aligned_cols=75 Identities=12% Similarity=0.288 Sum_probs=62.6
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~ 81 (404)
++|.||+.++...-.+....+|.|++++ +++|+.+.+|+|++++.+++.|+..+..||++++|.+ |....+.
T Consensus 46 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~------L~~~C~~ 117 (120)
T 2if5_A 46 ACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVSTANVGDILSAARLLEIPA------VSHVCAD 117 (120)
T ss_dssp HHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence 4799999999864332244578888764 8999999999999999999999999999999999995 9999999
Q ss_pred Hhh
Q 015578 82 FLT 84 (404)
Q Consensus 82 fL~ 84 (404)
||+
T Consensus 118 ~L~ 120 (120)
T 2if5_A 118 LLD 120 (120)
T ss_dssp HHC
T ss_pred HhC
Confidence 984
No 6
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.36 E-value=3.1e-07 Score=77.03 Aligned_cols=73 Identities=21% Similarity=0.218 Sum_probs=63.2
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~ 81 (404)
++|.||+.++.... ..+|.|+|++ +++|+.+.+|+|++++.+++.|+..+..||++++|.+ |....+.
T Consensus 45 a~S~yF~~~f~~~~----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~ 112 (119)
T 3b84_A 45 CCSHFFQSLYGDGS----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPE------AVELCQS 112 (119)
T ss_dssp HHCHHHHHHHTTTT----CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred hcCHHHHHHHCCCC----CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 47999999998643 3578888877 8999999999999999999999999999999999995 9999999
Q ss_pred Hhhhh
Q 015578 82 FLTLV 86 (404)
Q Consensus 82 fL~~~ 86 (404)
||.+.
T Consensus 113 ~l~~~ 117 (119)
T 3b84_A 113 FKPKT 117 (119)
T ss_dssp CC---
T ss_pred HHHHc
Confidence 99764
No 7
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.34 E-value=7.8e-07 Score=78.07 Aligned_cols=105 Identities=13% Similarity=0.110 Sum_probs=81.3
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~ 81 (404)
++|.||++++.....+....+|.|+|++ +++|+.+.+|+|++++.+++.|+..+..+|++++|.+ |...++.
T Consensus 55 ~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 126 (172)
T 3htm_A 55 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 126 (172)
T ss_dssp HHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 5799999999864332244688898874 8999999999999999999999999999999999995 9999999
Q ss_pred HhhhhhccChHHHHHHHhhhccccchhhhh---hhHHHHHHHHHH
Q 015578 82 FLTLVILSSWKETITVLKSCKNLSPWAENL---QIVRRCCDSIAW 123 (404)
Q Consensus 82 fL~~~v~~sW~dsi~vL~sc~~llp~AE~l---~Iv~RCidsla~ 123 (404)
||.+.+ +-..++.+ +.+|+.. .+...|.+-|+.
T Consensus 127 ~l~~~l--~~~n~~~~-------~~~A~~~~~~~L~~~~~~~i~~ 162 (172)
T 3htm_A 127 ALCSNL--SVENAAEI-------LILADLHSADQLKTQAVDFINY 162 (172)
T ss_dssp HHHHTC--CTTTHHHH-------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhC--CHHHHHHH-------HHHHHHhCcHHHHHHHHHHHHH
Confidence 999754 22333333 3444443 366778777764
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.30 E-value=8.6e-07 Score=73.60 Aligned_cols=72 Identities=18% Similarity=0.346 Sum_probs=61.4
Q ss_pred ccccHHHHHHcCCCCCCCccceeec--CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLE--NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~--dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~t 79 (404)
++|.||+.++...+ ...|.|+ |+ .+++|+.+.+|+|++++.+++.||..+..||++++|.+ |....
T Consensus 43 a~S~yF~~~f~~~~----~~~i~l~~~~~--~~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~------L~~~C 110 (116)
T 2vpk_A 43 SFSEYFGAIYRSTS----ENNVFLDQSQV--KADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEE------VVTKC 110 (116)
T ss_dssp HHCHHHHHHHTTCC----CSCEECCTTTC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred hcCHHHHHHHcCCC----CCeEEeecCCC--CHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHH
Confidence 57999999998652 2355555 54 58999999999999999999999999999999999985 99999
Q ss_pred HHHhhh
Q 015578 80 EAFLTL 85 (404)
Q Consensus 80 E~fL~~ 85 (404)
+.||.+
T Consensus 111 ~~~l~~ 116 (116)
T 2vpk_A 111 KIKMED 116 (116)
T ss_dssp HHHHC-
T ss_pred HHHHhC
Confidence 999863
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.27 E-value=1.2e-06 Score=73.83 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=65.3
Q ss_pred ccccHHHHHHcCCCCCCCccceee-cCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKL-ENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l-~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE 80 (404)
++|.||++++.....+ ....|.| +++ .+++|+.+.+|+|.+++.+++.|+..|..+|++++|.+ |....+
T Consensus 50 a~S~~F~~~f~~~~~e-~~~~i~l~~~~--~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~ 120 (127)
T 1r29_A 50 ACSGLFYSIFTDQLKR-NLSVINLDPEI--NPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEH------VVDTCR 120 (127)
T ss_dssp HHCHHHHHHHTSTTTT-TCSEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHH
T ss_pred HhCHHHHHHhcCCccC-CCCEEEeCCCC--CHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 5799999999865433 4567888 665 58999999999999999999999999999999999995 999999
Q ss_pred HHhhh
Q 015578 81 AFLTL 85 (404)
Q Consensus 81 ~fL~~ 85 (404)
.||.+
T Consensus 121 ~~l~~ 125 (127)
T 1r29_A 121 KFIKA 125 (127)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99875
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.23 E-value=1.1e-06 Score=76.48 Aligned_cols=75 Identities=20% Similarity=0.277 Sum_probs=62.7
Q ss_pred ccccHHHHHHcCCCCC--CCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHH
Q 015578 2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~--~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~t 79 (404)
++|.||+.++...... ....+|.|+|++ +++|+.+.+|+|.+++.+++.||..|..||++++|.+ |....
T Consensus 68 a~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C 139 (144)
T 2ppi_A 68 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC 139 (144)
T ss_dssp HHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred HcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHH
Confidence 4799999999753211 134578888876 9999999999999999999999999999999999995 89998
Q ss_pred HHHhh
Q 015578 80 EAFLT 84 (404)
Q Consensus 80 E~fL~ 84 (404)
+.||.
T Consensus 140 ~~~L~ 144 (144)
T 2ppi_A 140 CEFLE 144 (144)
T ss_dssp HTTC-
T ss_pred HHHhC
Confidence 88873
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.22 E-value=5.7e-07 Score=77.24 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=62.0
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~ 81 (404)
++|.||+.++.... ..+|.|+|++ +++|+.+.+|+|.+++.+++.||..|..||++|+|.+ |.+..+.
T Consensus 46 a~S~yF~~mf~~~~----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~ 113 (135)
T 2yy9_A 46 CCSHFFQRIYGDGT----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPE------AVELCQS 113 (135)
T ss_dssp HHCHHHHHTCC--------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HhCHHHHHHHcCCC----CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 47899999988633 3478888877 8999999999999999999999999999999999995 9999999
Q ss_pred Hhhhhh
Q 015578 82 FLTLVI 87 (404)
Q Consensus 82 fL~~~v 87 (404)
||.+..
T Consensus 114 ~l~~~l 119 (135)
T 2yy9_A 114 FQPQTS 119 (135)
T ss_dssp CCC---
T ss_pred HHHHhc
Confidence 998754
No 12
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.21 E-value=2.1e-06 Score=73.77 Aligned_cols=76 Identities=16% Similarity=0.287 Sum_probs=65.2
Q ss_pred ccccHHHHHHcCCCCCCCccceeec-CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~-dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE 80 (404)
++|.||+.++..... +...|.++ ++ .+++|+.+.+|+|++++.+++.||..|..||++|+|.+ |....+
T Consensus 57 a~S~yF~~~f~~~~~--e~~~i~l~~~v--~~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~ 126 (138)
T 2z8h_A 57 ACSSYFHSRIVGQTD--AELTVTLPEEV--TVKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHN------IEESCF 126 (138)
T ss_dssp HHCHHHHHHHTTCCC--TTEEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGG------GHHHHH
T ss_pred HcCHHHHHHHhcCCC--CCceEEeCCCC--CHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 589999999986542 23467774 55 48999999999999999999999999999999999996 999999
Q ss_pred HHhhhhh
Q 015578 81 AFLTLVI 87 (404)
Q Consensus 81 ~fL~~~v 87 (404)
.||.+.+
T Consensus 127 ~~l~~~l 133 (138)
T 2z8h_A 127 QFLKFKF 133 (138)
T ss_dssp HHTTCCC
T ss_pred HHHHHhc
Confidence 9998755
No 13
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.20 E-value=5.2e-07 Score=76.56 Aligned_cols=73 Identities=23% Similarity=0.405 Sum_probs=57.0
Q ss_pred ccccHHHHHHcCCCCCCCccceeec-CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~-dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE 80 (404)
++|.||+.++... ...+|.|+ +++ +++|+.+.+|+|.+++++++.|+..+..||++|+|.+ |.+..+
T Consensus 54 a~S~~F~~~f~~~----~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~------l~~~C~ 121 (129)
T 3ga1_A 54 ASSSYFRDLFNNS----RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQE------IMEKGT 121 (129)
T ss_dssp HHBHHHHHHHHHC----CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTT------SSCC--
T ss_pred HcCHHHHHHHcCC----CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 4799999999865 23477785 665 8999999999999999999999999999999999996 888888
Q ss_pred HHhhhh
Q 015578 81 AFLTLV 86 (404)
Q Consensus 81 ~fL~~~ 86 (404)
.||.++
T Consensus 122 ~~L~~~ 127 (129)
T 3ga1_A 122 EFFLKV 127 (129)
T ss_dssp ------
T ss_pred HHHHHh
Confidence 888764
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.19 E-value=1e-06 Score=73.88 Aligned_cols=70 Identities=19% Similarity=0.362 Sum_probs=61.0
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~ 81 (404)
++|.||+.++... ...|.++++ .+++|+.+.+|+|++++.+++.|+..+..+|++|+|.+ |.+..+.
T Consensus 48 a~S~yF~~~f~~~-----~~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~------L~~~C~~ 114 (119)
T 2q81_A 48 ACSEYFKMLFVDQ-----KDVVHLDIS--NAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQD------IITACHA 114 (119)
T ss_dssp HHCHHHHHHHHHC-----CSGGGGGGC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHHcCC-----CCEEEeCCC--CHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence 5799999999862 235666654 58999999999999999999999999999999999995 9999999
Q ss_pred Hhh
Q 015578 82 FLT 84 (404)
Q Consensus 82 fL~ 84 (404)
||.
T Consensus 115 ~l~ 117 (119)
T 2q81_A 115 LKS 117 (119)
T ss_dssp HHT
T ss_pred HHh
Confidence 985
No 15
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.16 E-value=5.6e-07 Score=76.84 Aligned_cols=93 Identities=11% Similarity=0.073 Sum_probs=63.0
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~ 81 (404)
++|.||++++.....+....+|.|+|+ .+++|+.+.+|+|++++.+++.|+..+..+|++++|.+ |...++.
T Consensus 46 ~~S~~F~~~f~~~~~e~~~~~i~l~~~--~~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 117 (145)
T 4eoz_A 46 ARSPVFSAMFEHEMEESKKNRVEINDV--EPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 117 (145)
T ss_dssp HHCHHHHHHHHSSSHHHHHTEEEECSS--CHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHC
T ss_pred HcCHHHHHHHcCCCcCCCCceEEecCC--CHHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence 579999999986432213357888886 48999999999999999999999999999999999995 9999999
Q ss_pred HhhhhhccChHHHHHHHhhhccccchhhhh
Q 015578 82 FLTLVILSSWKETITVLKSCKNLSPWAENL 111 (404)
Q Consensus 82 fL~~~v~~sW~dsi~vL~sc~~llp~AE~l 111 (404)
||.+.+- ...|-.++.+|+..
T Consensus 118 ~l~~~l~---------~~n~~~~l~~A~~~ 138 (145)
T 4eoz_A 118 ALCSNLS---------VENAAEILILADLH 138 (145)
T ss_dssp C-----------------------------
T ss_pred HHHHhCC---------HHHHHHHHHHHHHh
Confidence 9987541 12444555555544
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.10 E-value=1.2e-06 Score=73.62 Aligned_cols=63 Identities=19% Similarity=0.286 Sum_probs=54.2
Q ss_pred ccccHHHHHHcCCCCCCCccceeecC-CCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCcc
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLEN-FPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSE 68 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~d-fPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE 68 (404)
++|.||+.++..... +..+|.++| + .+++|+.+.+|+|.+++.+++.||..+..||++|+|.+
T Consensus 53 a~S~yF~~~f~~~~~--e~~~i~l~~~~--~~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~ 116 (125)
T 3ohu_A 53 ACSEYFWQALVGQTK--NDLVVSLPEEV--TARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHN 116 (125)
T ss_dssp HHBHHHHHHHTTCCC--SSCEEECCTTC--CHHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSS
T ss_pred HcCHHHHHHhcCCCC--CCcEEEeCCCC--CHHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHH
Confidence 479999999986543 245677765 4 58999999999999999999999999999999999986
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.91 E-value=3.6e-06 Score=70.94 Aligned_cols=73 Identities=16% Similarity=0.282 Sum_probs=58.9
Q ss_pred ccccHHHHHHcCCCCCCCccceeec-CCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~-dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE 80 (404)
++|.||+.++..... +..+|.++ ++ .+++|+.+.+|+|++++.+++.||..+..||++++|.+ |....+
T Consensus 50 a~S~yF~~mf~~~~~--e~~~i~l~~~v--~~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~------L~~~C~ 119 (124)
T 2ihc_A 50 ACSSYFHSRIVGQAD--GELNITLPEEV--TVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHN------IEESCF 119 (124)
T ss_dssp HHBHHHHHHHTTC-----CEEEECCTTS--CHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSS------CCGGGG
T ss_pred HcCHHHHHHHcCCCC--CCceEeecCCc--CHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHH------HHHHHH
Confidence 589999999986442 23467774 44 58999999999999999999999999999999999995 777777
Q ss_pred HHhh
Q 015578 81 AFLT 84 (404)
Q Consensus 81 ~fL~ 84 (404)
.||.
T Consensus 120 ~~l~ 123 (124)
T 2ihc_A 120 QFLK 123 (124)
T ss_dssp GTC-
T ss_pred HHHh
Confidence 7663
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.83 E-value=1.1e-05 Score=68.13 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=50.6
Q ss_pred cceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHHHhhh
Q 015578 21 YDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTL 85 (404)
Q Consensus 21 ~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~ 85 (404)
..|.|+|++ +++|+.+.+|+|.++++++..||..+..||++|+|.+ |....+.++.+
T Consensus 61 ~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 61 QWALGEGIS--PSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp EEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred CEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 467888876 8999999999999999999999999999999999995 88989888765
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.80 E-value=2.1e-05 Score=75.86 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=82.0
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCccccCCcchHHHHhhHhhhcCccccCCCchHHHHHH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~ 81 (404)
++|.||+.++...-.+....+|.|+|++ +++|+...+|+|+.++.++..|+..|-.||++++|.. |...+|.
T Consensus 195 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 266 (312)
T 3hqi_A 195 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 266 (312)
T ss_dssp HHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence 5799999999864332245689999874 8999999999999999999999999999999999984 9999999
Q ss_pred HhhhhhccChHHHHHHHhhhccccchhhhh---hhHHHHHHHHHHH
Q 015578 82 FLTLVILSSWKETITVLKSCKNLSPWAENL---QIVRRCCDSIAWK 124 (404)
Q Consensus 82 fL~~~v~~sW~dsi~vL~sc~~llp~AE~l---~Iv~RCidsla~k 124 (404)
||.+.+-. .+|-.++.+|+.. .+..+|++-|+..
T Consensus 267 ~l~~~~~~---------~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 267 ALCSNLSV---------ENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp HHHTTCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHccCCH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99875421 2344445556654 4778898888753
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.79 E-value=1.7e-05 Score=66.28 Aligned_cols=60 Identities=20% Similarity=0.283 Sum_probs=53.4
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCcc-ccCCcchHHHHhhHhhhcCcc
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPI-AFNPNNIAPLRCASEFLDMSE 68 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~i-~lt~~NVa~LrCAAeyLeMtE 68 (404)
++|.||+.++... ..+|.|++++ +++|+.+.+|+|++++ ++++.|+..+..||++++|..
T Consensus 52 a~S~~F~~~f~~~-----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 52 ASSTYFHQLFSVA-----GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp HHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHH
T ss_pred HcCHHHHHHHcCC-----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccc
Confidence 5799999999863 3478888876 8999999999999999 799999999999999999974
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=96.49 E-value=0.0042 Score=50.51 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=47.3
Q ss_pred ccccHHHHHHcCCCCC--CCccceeecCCCCChHHHHHHHHhhc-----C---Cccc---cCCcchHHHHhhHhhhc
Q 015578 2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCY-----G---LPIA---FNPNNIAPLRCASEFLD 65 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~--~~~~~i~l~dfPGGaeaFEl~akFCY-----g---~~i~---lt~~NVa~LrCAAeyLe 65 (404)
..|++||.++....+. .....|.|++++ +.+++.+..||| . ..+. |++.|+--|-.||.||+
T Consensus 22 ~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 22 LTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLD 96 (97)
T ss_dssp TTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhC
Confidence 4699999999864321 124467777654 789999999999 3 4555 99999999999999997
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=96.42 E-value=0.002 Score=57.00 Aligned_cols=79 Identities=14% Similarity=0.207 Sum_probs=62.3
Q ss_pred ccccHHHHHHcCCCC--CCCccceeecCCCCChHHHHHHHHhhcCCc--------------------------cccCCcc
Q 015578 2 SKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCYGLP--------------------------IAFNPNN 53 (404)
Q Consensus 2 SkSg~l~rl~~~~~~--~~~~~~i~l~dfPGGaeaFEl~akFCYg~~--------------------------i~lt~~N 53 (404)
+.|++|+.++...+- +.....|.|++++ +.+++.+..|||-.+ +.++..|
T Consensus 21 ~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~~~ 98 (159)
T 2ast_A 21 KQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGT 98 (159)
T ss_dssp HTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCHHH
T ss_pred HHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCHHH
Confidence 469999999986321 1123467788765 579999999999544 7899999
Q ss_pred hHHHHhhHhhhcCccccCCCchHHHHHHHhhhhhc
Q 015578 54 IAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVIL 88 (404)
Q Consensus 54 Va~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~~v~ 88 (404)
+--|-.||.||+|.. |+.-+-.|+...+-
T Consensus 99 l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 99 LFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp HHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 999999999999994 99999999987664
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=93.98 E-value=0.047 Score=47.27 Aligned_cols=74 Identities=15% Similarity=0.224 Sum_probs=61.0
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCc--------------------------cccCCcchH
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP--------------------------IAFNPNNIA 55 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~--------------------------i~lt~~NVa 55 (404)
..|++||.++.... ...|.|++++ +.+++.+..|||--. +.++..++-
T Consensus 22 ~~S~~ik~ml~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~ 95 (141)
T 1fs1_B 22 KQSVTIKTMLEDLG----MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLF 95 (141)
T ss_dssp GTCHHHHHHHHHTC----CSSEECTTCC--HHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHH
T ss_pred HHhHHHHHHHHhcC----CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHH
Confidence 57999999998643 2367788765 579999999999422 678999999
Q ss_pred HHHhhHhhhcCccccCCCchHHHHHHHhhhhh
Q 015578 56 PLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (404)
Q Consensus 56 ~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~~v 87 (404)
-|-.||.||++. .|+.-+-.|+...+
T Consensus 96 eLi~AAnyL~I~------~Lldl~c~~vA~~i 121 (141)
T 1fs1_B 96 ELILAANYLDIK------GLLDVTCKTVANMI 121 (141)
T ss_dssp HHHHHHHHHTCH------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh------HHHHHHHHHHHHHH
Confidence 999999999999 49999999988765
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=93.86 E-value=0.017 Score=51.07 Aligned_cols=94 Identities=16% Similarity=0.263 Sum_probs=49.2
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCCc---------------------------cccCCcch
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP---------------------------IAFNPNNI 54 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~~---------------------------i~lt~~NV 54 (404)
..|++|+.++.... ....|.|++++| .+++.+..|||--. +.+++.++
T Consensus 24 ~~S~~ik~ml~~~~---~~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l 98 (160)
T 2p1m_A 24 LESQTIAHMVEDDC---VDNGVPLPNVTS--KILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATL 98 (160)
T ss_dssp HTCTTTC---------------CCTTSCH--HHHHHHHHC----------------------------------------
T ss_pred HHhHHHHHHHHccC---CCCceeCCcCcH--HHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHH
Confidence 46889999987643 223677777665 89999999999533 47899999
Q ss_pred HHHHhhHhhhcCccccCCCchHHHHHHHhhhhhc-cChHHHHHHHhhhccccc
Q 015578 55 APLRCASEFLDMSEEYEDGNLISKTEAFLTLVIL-SSWKETITVLKSCKNLSP 106 (404)
Q Consensus 55 a~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~~v~-~sW~dsi~vL~sc~~llp 106 (404)
--|-.||.||+|. .|+.-+-.|+...+- .+-.+.-..+.=-..+-|
T Consensus 99 ~eLi~AAnyL~I~------~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~ 145 (160)
T 2p1m_A 99 FELILAANYLNIK------NLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTP 145 (160)
T ss_dssp --CHHHHHHTTCH------HHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCH
T ss_pred HHHHHHHHHHhHH------HHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCH
Confidence 9999999999999 499999999987663 344444443332233444
No 25
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=86.01 E-value=0.94 Score=40.32 Aligned_cols=78 Identities=8% Similarity=0.117 Sum_probs=55.5
Q ss_pred ccccHHHHHHcCCCCC----CCccceeecCCCCChHHHHHHHHhhcCCc-------------------------cccCCc
Q 015578 2 SKCGYIARLELQPSIS----NLGYDLKLENFPGGSETFEIILKFCYGLP-------------------------IAFNPN 52 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~----~~~~~i~l~dfPGGaeaFEl~akFCYg~~-------------------------i~lt~~ 52 (404)
..|+.|+.++...... .+...|.|++++ +.+++.|..|||--+ +.+.+.
T Consensus 27 ~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~ 104 (169)
T 3v7d_A 27 ERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQE 104 (169)
T ss_dssp TTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCHH
T ss_pred HHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCHH
Confidence 4699999999865431 122567788765 689999999998311 356667
Q ss_pred chHHHHhhHhhhcCccccCCCchHHHHHHHhhhhh
Q 015578 53 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (404)
Q Consensus 53 NVa~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~~v 87 (404)
.+--|-.||.||+|. .|+.-+=+++...+
T Consensus 105 ~LfeLi~AAnyLdIk------~Lldl~c~~vA~~i 133 (169)
T 3v7d_A 105 MLYEIILAANYLNIK------PLLDAGCKVVAEMI 133 (169)
T ss_dssp HHHHHHHHHHHTTCH------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcH------HHHHHHHHHHHHHH
Confidence 778899999999999 48888777776554
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=84.60 E-value=0.59 Score=37.74 Aligned_cols=63 Identities=19% Similarity=0.264 Sum_probs=45.1
Q ss_pred ccccHHHHHHcCCCC-C-CCccceeecCCCCChHHHHHHHHhhcCC-----------ccccCCcchHHHHhhHhhhcC
Q 015578 2 SKCGYIARLELQPSI-S-NLGYDLKLENFPGGSETFEIILKFCYGL-----------PIAFNPNNIAPLRCASEFLDM 66 (404)
Q Consensus 2 SkSg~l~rl~~~~~~-~-~~~~~i~l~dfPGGaeaFEl~akFCYg~-----------~i~lt~~NVa~LrCAAeyLeM 66 (404)
..|++||.++...+. . .....|.|++++ +.+++.+..|||-- .+.+.+..+--|--||.||++
T Consensus 21 ~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 21 LTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp TTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence 479999999987543 1 122467777655 57999999999831 246788888889999999974
No 27
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=78.70 E-value=1.1 Score=36.34 Aligned_cols=62 Identities=11% Similarity=0.106 Sum_probs=44.9
Q ss_pred ccccHHHHHHcCCCCCCCccceeecCCCCChHHHHHHHHhhcCC--------------ccccCCcchHHHHhhHhhhcC
Q 015578 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGL--------------PIAFNPNNIAPLRCASEFLDM 66 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~~~~~~i~l~dfPGGaeaFEl~akFCYg~--------------~i~lt~~NVa~LrCAAeyLeM 66 (404)
..|+.||.++.. ...+....|-|++++ +.+++.+..|||-- .+.+.+..+--|--||.||++
T Consensus 24 ~~S~~ik~ml~~-~~e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 24 MISPTLKAMIEG-PFRESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp TTCHHHHHHHHS-STTTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHhHHHHHHHhc-ccccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 479999999986 222123478888765 57999999999931 135666777788889999874
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=69.59 E-value=1.8 Score=36.00 Aligned_cols=63 Identities=19% Similarity=0.243 Sum_probs=43.7
Q ss_pred ccccHHHHHHcCCCCC--CCccceeecCCCCChHHHHHHHHhhcCC-----------ccccCCcchHHHHhhHhhhcC
Q 015578 2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCYGL-----------PIAFNPNNIAPLRCASEFLDM 66 (404)
Q Consensus 2 SkSg~l~rl~~~~~~~--~~~~~i~l~dfPGGaeaFEl~akFCYg~-----------~i~lt~~NVa~LrCAAeyLeM 66 (404)
..|+.|+.++...... .....|-|++++ +.+++.|..|||-- .+.+.+..+--|--||.||++
T Consensus 37 ~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 37 LTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp HTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHhCc
Confidence 3689999999865431 122467777665 57999999999821 145677778888899999975
No 29
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=53.89 E-value=6.5 Score=32.72 Aligned_cols=41 Identities=5% Similarity=-0.114 Sum_probs=31.8
Q ss_pred hhhchhhHhhhhcCCCCCChhHHHHHHHhcCCcccccCcchhHHHHHhhhcCCC
Q 015578 334 VSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVF 387 (404)
Q Consensus 334 VakLvD~YLaEiA~D~nL~~~kF~~Lae~lP~~aR~~hDgLYRAIDiYLKaHp~ 387 (404)
+.|..=.| |...|.+.+|.++.+.+ .++++|||-||-+||.
T Consensus 82 ~vkwt~~y--e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 82 HVVWTFHF--EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EEEEEEEE--EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EEEEEEEE--EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 45555567 77888999999987665 6789999999999984
No 30
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=41.10 E-value=9.7 Score=23.92 Aligned_cols=17 Identities=35% Similarity=0.423 Sum_probs=14.5
Q ss_pred cchHHHHhhHhhhcCcc
Q 015578 52 NNIAPLRCASEFLDMSE 68 (404)
Q Consensus 52 ~NVa~LrCAAeyLeMtE 68 (404)
.||..|--||+|||=.|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 48999999999998554
No 31
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=37.05 E-value=14 Score=29.20 Aligned_cols=42 Identities=10% Similarity=0.200 Sum_probs=32.6
Q ss_pred cccchHHHHHHHHHHHhhHhhhhhhhcchhhhhhhhchhhHhhhh
Q 015578 301 TMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEV 345 (404)
Q Consensus 301 tlyDVd~V~riv~~Fl~~~~~~~~~~~~~~~~~VakLvD~YLaEi 345 (404)
..++.+++.||+..+...... ..+..++.-+++++|-|..|.
T Consensus 7 ~~~~~~lI~ril~~~f~~~kt---rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 7 GGFRKETVERLLRLHFRDGRT---RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp CCCCHHHHHHHHHHHCCSTTC---EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhccCcc---cccHHHHHHHHHHHHHHHHHH
Confidence 578999999999986654321 134678899999999999883
No 32
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=22.03 E-value=32 Score=30.16 Aligned_cols=36 Identities=8% Similarity=0.105 Sum_probs=23.4
Q ss_pred hcCCCCCChhHHHHHHHhcCCcccccCcchhHHHHHhhhcCCCC
Q 015578 345 VARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFF 388 (404)
Q Consensus 345 iA~D~nL~~~kF~~Lae~lP~~aR~~hDgLYRAIDiYLKaHp~l 388 (404)
--.|..+++.+..+.-+ .-.+++++||-||-+||+.
T Consensus 128 ~~~~~~~~~e~~k~~~~--------~~~~~~K~ie~yllanp~~ 163 (165)
T 3ie5_A 128 PKPGCTVNEEEVKIGEK--------KAYEFYKQVEEYLAANPEV 163 (165)
T ss_dssp ECTTCCCCHHHHHHHHH--------HHHHHHHHHHHHHHHCTTT
T ss_pred ECCCCCCCHHHHHHHHH--------HHHHHHHHHHHHHHhChhh
Confidence 34555566666543222 2246899999999999974
No 33
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=21.10 E-value=34 Score=36.19 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=26.9
Q ss_pred CCChhHHHHHHHhcCCcccccCcchhHHHHHhhhcCCCC
Q 015578 350 NLSITKFQVLAESLPENARTCHDGLYRAIDTYLKPIVFF 388 (404)
Q Consensus 350 nL~~~kF~~Lae~lP~~aR~~hDgLYRAIDiYLKaHp~l 388 (404)
...-..|.+++--|+. -|=.||||.-||+.||.+
T Consensus 334 Aw~h~~Fkdii~KVaN-----~EiyYKAi~FYL~e~P~l 367 (624)
T 3lvg_A 334 AWKEGQFKDIITKVAN-----VELYYRAIQFYLEFKPLL 367 (624)
T ss_dssp HCCGGGGTTTGGGCSC-----SHHHHHHHHHHTTSCCTT
T ss_pred hccHHHHHHHHHHcch-----HHHHHHHHHHHHHhChHH
Confidence 4555667777776653 578999999999999987
No 34
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.46 E-value=71 Score=25.30 Aligned_cols=34 Identities=9% Similarity=-0.020 Sum_probs=28.8
Q ss_pred cccCCcchHHHHhhHhhhcCccccCCCchHHHHHHHhhhh
Q 015578 47 IAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLV 86 (404)
Q Consensus 47 i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~~tE~fL~~~ 86 (404)
=.|+|.|...++-.|+..+.++ |..++..|+.+.
T Consensus 6 ~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~n 39 (105)
T 2eqx_A 6 SGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTH 39 (105)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHH
Confidence 3589999999999999888774 999999998753
No 35
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=20.13 E-value=37 Score=29.35 Aligned_cols=16 Identities=31% Similarity=0.362 Sum_probs=13.9
Q ss_pred chhHHHHHhhhcCCCC
Q 015578 373 GLYRAIDTYLKPIVFF 388 (404)
Q Consensus 373 gLYRAIDiYLKaHp~l 388 (404)
+++++||-||-+||+.
T Consensus 142 ~~~k~ie~yll~np~~ 157 (159)
T 4a8u_A 142 TLLRAVESYLLAHSDA 157 (159)
T ss_dssp HHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHhhChhh
Confidence 7899999999999964
No 36
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=20.02 E-value=29 Score=27.60 Aligned_cols=42 Identities=12% Similarity=0.258 Sum_probs=32.1
Q ss_pred cccchHHHHHHHHHHHhhHhhhhhhhcchhhhhhhhchhhHhhhh
Q 015578 301 TMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEV 345 (404)
Q Consensus 301 tlyDVd~V~riv~~Fl~~~~~~~~~~~~~~~~~VakLvD~YLaEi 345 (404)
..+..+++.||+..+...... ..+..++.-|++++|-|..|.
T Consensus 11 ~~i~~~li~ril~~~F~~~kT---kIs~dAl~l~aeyl~iFV~EA 52 (84)
T 4dra_E 11 SGFRKELVSRLLHLHFKDDKT---KVSGDALQLMVELLKVFVVEA 52 (84)
T ss_dssp CCCCHHHHHHHHHTTCSSTTC---EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCCCc---cccHHHHHHHHHHHHHHHHHH
Confidence 568899999999976653322 134678899999999999883
Done!