Query         015580
Match_columns 404
No_of_seqs    159 out of 1911
Neff          11.3
Searched_HMMs 46136
Date          Fri Mar 29 07:38:22 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015580.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015580hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.5E-68 3.2E-73  482.1  36.3  362   31-401    24-416 (489)
  2 PLN02500 cytochrome P450 90B1  100.0 6.7E-67 1.4E-71  485.7  38.6  373   27-400    32-412 (490)
  3 PLN02774 brassinosteroid-6-oxi 100.0 2.6E-65 5.6E-70  471.3  37.9  364   29-400    27-395 (463)
  4 PLN02196 abscisic acid 8'-hydr 100.0 3.3E-65 7.2E-70  470.2  38.3  381   12-400    14-395 (463)
  5 KOG0158 Cytochrome P450 CYP3/C 100.0 1.8E-64   4E-69  448.7  36.8  373   20-402    18-425 (499)
  6 PLN03141 3-epi-6-deoxocathaste 100.0 1.2E-63 2.5E-68  459.3  36.7  372   29-400     3-383 (452)
  7 PLN02987 Cytochrome P450, fami 100.0   6E-63 1.3E-67  453.6  39.5  386   14-400    11-398 (472)
  8 PLN02971 tryptophan N-hydroxyl 100.0 1.6E-63 3.5E-68  466.7  35.7  366   29-400    53-456 (543)
  9 PLN02183 ferulate 5-hydroxylas 100.0   2E-62 4.4E-67  457.8  35.8  368   23-400    26-432 (516)
 10 PLN02302 ent-kaurenoic acid ox 100.0 2.6E-61 5.7E-66  450.2  41.8  372   27-400    36-419 (490)
 11 PLN03234 cytochrome P450 83B1; 100.0 2.6E-61 5.7E-66  449.9  37.3  372   21-400    16-418 (499)
 12 PLN02687 flavonoid 3'-monooxyg 100.0 1.7E-61 3.8E-66  451.6  36.0  364   28-400    29-426 (517)
 13 PTZ00404 cytochrome P450; Prov 100.0 5.2E-62 1.1E-66  452.8  32.2  366   24-400    20-413 (482)
 14 PLN02290 cytokinin trans-hydro 100.0 3.9E-61 8.5E-66  450.3  36.5  363   31-400    40-444 (516)
 15 PLN00110 flavonoid 3',5'-hydro 100.0 3.8E-61 8.2E-66  446.7  35.6  386    6-400     4-418 (504)
 16 PLN00168 Cytochrome P450; Prov 100.0 1.4E-60   3E-65  445.7  39.1  392    4-400     4-436 (519)
 17 PLN02394 trans-cinnamate 4-mon 100.0 1.4E-60 2.9E-65  445.6  36.5  368   25-400    22-422 (503)
 18 PLN03112 cytochrome P450 famil 100.0 6.3E-60 1.4E-64  441.9  36.3  386    5-399     4-424 (514)
 19 PLN02966 cytochrome P450 83A1  100.0 1.1E-59 2.4E-64  438.2  34.6  371   24-400    20-421 (502)
 20 PF00067 p450:  Cytochrome P450 100.0 3.9E-60 8.4E-65  441.4  29.9  360   35-402     1-393 (463)
 21 KOG0157 Cytochrome P450 CYP4/C 100.0 4.5E-60 9.8E-65  435.9  27.0  364   31-400    33-422 (497)
 22 PLN02655 ent-kaurene oxidase   100.0 3.2E-58   7E-63  424.5  34.1  357   35-400     1-390 (466)
 23 PLN03018 homomethionine N-hydr 100.0 3.5E-57 7.6E-62  420.9  38.6  363   31-400    38-443 (534)
 24 KOG0684 Cytochrome P450 [Secon 100.0 1.7E-57 3.6E-62  385.5  30.9  359   33-401    31-407 (486)
 25 PLN03195 fatty acid omega-hydr 100.0 6.1E-57 1.3E-61  421.7  35.1  358   35-400    32-442 (516)
 26 PLN02169 fatty acid (omega-1)- 100.0 6.5E-57 1.4E-61  417.6  34.8  353   36-400    34-425 (500)
 27 PLN02738 carotene beta-ring hy 100.0 2.1E-57 4.7E-62  426.7  29.7  339   56-399   150-517 (633)
 28 KOG0159 Cytochrome P450 CYP11/ 100.0   3E-56 6.6E-61  387.3  29.7  365   31-401    48-446 (519)
 29 PLN02936 epsilon-ring hydroxyl 100.0 6.1E-56 1.3E-60  411.1  33.5  364   31-400    10-406 (489)
 30 PLN02426 cytochrome P450, fami 100.0   7E-53 1.5E-57  390.0  34.3  345   41-400    49-424 (502)
 31 PLN02648 allene oxide synthase 100.0 3.4E-54 7.4E-59  392.7  24.9  348   30-400    14-406 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.7E-44 3.7E-49  325.5  28.8  310   59-398    24-346 (411)
 33 PF12273 RCR:  Chitin synthesis  84.2     1.1 2.3E-05   33.5   2.8   27    4-30      2-28  (130)
 34 PF08492 SRP72:  SRP72 RNA-bind  69.1     3.7 7.9E-05   25.5   1.6    8  393-400    44-51  (59)
 35 PF12508 DUF3714:  Protein of u  68.2     1.5 3.3E-05   35.2  -0.2   44  330-374    51-94  (200)
 36 PHA03049 IMV membrane protein;  62.9      19 0.00042   22.7   3.8   24    1-24      1-24  (68)
 37 PF05952 ComX:  Bacillus compet  61.9     9.8 0.00021   23.4   2.5   21  290-310     3-23  (57)
 38 PF01102 Glycophorin_A:  Glycop  60.4     9.8 0.00021   27.9   2.7    8   21-28     85-92  (122)
 39 PF05961 Chordopox_A13L:  Chord  51.7      40 0.00086   21.5   3.9   25    1-25      1-25  (68)
 40 PF15330 SIT:  SHP2-interacting  49.3      33 0.00071   24.6   3.8   10   40-49     45-54  (107)
 41 PF12554 MOZART1:  Mitotic-spin  47.7      59  0.0013   19.3   4.4   42  269-310     6-47  (48)
 42 TIGR03779 Bac_Flav_CT_M Bacter  45.3     5.6 0.00012   35.9  -0.6   45  330-375   254-298 (410)
 43 PF09926 DUF2158:  Uncharacteri  41.0      30 0.00066   21.0   2.3   17   70-86      3-19  (53)
 44 KOG3653 Transforming growth fa  37.9 1.1E+02  0.0024   28.5   6.2   35   69-103   222-256 (534)
 45 PRK06789 flagellar motor switc  35.8      38 0.00083   22.3   2.3   38  338-375    22-62  (74)
 46 PRK01844 hypothetical protein;  35.8      42 0.00092   21.8   2.4   17   20-36     22-38  (72)
 47 PRK00523 hypothetical protein;  32.6      52  0.0011   21.4   2.4    7   30-36     33-39  (72)
 48 PF14991 MLANA:  Protein melan-  32.6      15 0.00032   26.2   0.0   25    8-32     32-56  (118)
 49 PF13625 Helicase_C_3:  Helicas  31.6      67  0.0015   23.8   3.4   40   59-100    76-115 (129)
 50 PF08776 VASP_tetra:  VASP tetr  31.0   1E+02  0.0023   17.3   3.9   15  300-314    10-24  (40)
 51 PF08780 NTase_sub_bind:  Nucle  30.2 1.6E+02  0.0035   21.7   5.1   28  118-146    72-102 (124)
 52 KOG3054 Uncharacterized conser  28.9      84  0.0018   26.0   3.6   26    1-26      1-26  (299)
 53 PF03672 UPF0154:  Uncharacteri  28.6      49  0.0011   21.0   1.8   21   16-36     11-31  (64)
 54 PRK09458 pspB phage shock prot  28.6 1.4E+02  0.0031   19.7   3.9    7    1-7       1-7   (75)
 55 PF14483 Cut8_M:  Cut8 dimerisa  27.3      86  0.0019   17.5   2.5   21  288-308    14-35  (38)
 56 COG3763 Uncharacterized protei  27.1      73  0.0016   20.6   2.4    6   31-36     33-38  (71)
 57 PRK11875 psbT photosystem II r  26.9 1.1E+02  0.0023   16.1   2.7   13    1-13      1-13  (31)
 58 PRK02302 hypothetical protein;  25.3 1.2E+02  0.0026   20.8   3.3   35   63-98     20-54  (89)
 59 PF08285 DPM3:  Dolichol-phosph  25.2 1.3E+02  0.0028   20.8   3.6   31  285-315    52-82  (91)
 60 PF11227 DUF3025:  Protein of u  25.1      41 0.00089   27.3   1.3   19  378-396   193-211 (212)
 61 PF05410 Peptidase_C31:  Porcin  24.8      71  0.0015   21.3   2.1   68  299-374    35-104 (105)
 62 CHL00031 psbT photosystem II p  24.5   1E+02  0.0022   16.5   2.2   13    1-13      1-13  (33)
 63 PF11138 DUF2911:  Protein of u  24.4      66  0.0014   24.5   2.2   38  356-394    53-97  (145)
 64 PF07620 SLEI_Leptospira:  SLEI  23.5      35 0.00077   14.8   0.4   10  394-403     1-10  (16)
 65 PRK13467 F0F1 ATP synthase sub  23.5 1.3E+02  0.0028   19.3   3.1   25  286-310    20-44  (66)
 66 PF04367 DUF502:  Protein of un  23.4 1.1E+02  0.0023   21.9   3.1   39   40-83     33-72  (108)
 67 PRK02886 hypothetical protein;  22.3 1.5E+02  0.0033   20.2   3.3   31   68-98     22-52  (87)
 68 PHA01327 hypothetical protein   22.3      54  0.0012   18.4   1.0   21  116-136    10-30  (49)
 69 PF07849 DUF1641:  Protein of u  22.1 1.2E+02  0.0026   17.3   2.5   19  290-308    13-31  (42)
 70 PF12273 RCR:  Chitin synthesis  21.9 1.4E+02   0.003   22.2   3.5   17   18-34     13-29  (130)
 71 PF13893 RRM_5:  RNA recognitio  21.4 1.9E+02  0.0042   17.1   4.1   34   64-97      2-39  (56)
 72 PF12606 RELT:  Tumour necrosis  21.2   2E+02  0.0044   17.3   4.3    7   24-30     24-30  (50)
 73 PF15080 DUF4547:  Domain of un  20.7 4.1E+02  0.0089   20.6   5.6   49  265-313   113-171 (196)
 74 PF14550 Peptidase_U35_2:  Puta  20.7      62  0.0013   23.8   1.4   31  353-386    71-101 (122)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-68  Score=482.15  Aligned_cols=362  Identities=23%  Similarity=0.327  Sum_probs=298.9

Q ss_pred             cccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccccccCc-c
Q 015580           31 RLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP-G  109 (404)
Q Consensus        31 ~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-~  109 (404)
                      ..++||||+++|++||++++..    ..++..+.++.++|||+|++|+|..++||++|+++++|++.+++..|++++. .
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~----~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~   99 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGS----LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPT   99 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCC----CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCch
Confidence            3889999999999999999865    2599999999999999999999999999999999999999999999998886 2


Q ss_pred             hh-hhhh-ccCccccc-cchhhHHHHHHhhhhc-ChhhhhhhhhHHHHHHHHHHHhcccc----ceehHhhh-hhHHHHH
Q 015580          110 SI-SNLL-GKHSLLLM-KGSLHKRMHSLTMSFA-NSSIIRDHLLVDIDRLVRLHMDSWTD----RVLLMEEA-KKITFEL  180 (404)
Q Consensus       110 ~~-~~~~-g~~~~~~~-~~~~~~~~R~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~----~~vdl~~~-~~~~~~~  180 (404)
                      .. ..+. |+.++..+ +|+.|+.+||+....+ +....++ ....-.+.++.+++.+..    .+||+... ..++.++
T Consensus       100 ~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~-~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen  100 ATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKS-FMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNV  178 (489)
T ss_pred             hhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhh-hHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHH
Confidence            23 3343 55777777 7999999999888755 5555555 444446777777777663    38999999 9999999


Q ss_pred             HHHHHccCCchH----HHHHHHHHHHHHHhhhcc------CC-c--ccch--hhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 015580          181 TVKQLMSFDPNE----WTESLRKEYVLVIEGFFT------VP-L--PIFS--TTYRRAIQARTKVAEALSLVVRQRRKES  245 (404)
Q Consensus       181 ~~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~------~~-~--~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~  245 (404)
                      +++.+||.+...    ...++.+.+.+.......      +| +  +++.  ...++......++..++++.++++++..
T Consensus       179 I~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  179 ICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999988774    223344444444433322      23 1  2221  1234455555668999999999988763


Q ss_pred             ccCCccchHHHHHHcC--CC---CCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCC
Q 015580          246 ESGERKNDMLEALLAG--DD---GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQ  320 (404)
Q Consensus       246 ~~~~~~~~~l~~l~~~--~~---~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~  320 (404)
                      +. ++..|+++.+++.  ++   .++++++...+.++++||+|||++|+.|++.+|++||++|+|+|+||++++|   .+
T Consensus       259 ~~-~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG---~~  334 (489)
T KOG0156|consen  259 GD-EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVG---KG  334 (489)
T ss_pred             cc-CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC---CC
Confidence            11 2338999999975  11   2899999999999999999999999999999999999999999999999998   56


Q ss_pred             CCCChhhhccCccHHHHHHhhhhccCCCc-cccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCc
Q 015580          321 EPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQV  399 (404)
Q Consensus       321 ~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~  399 (404)
                      +.++.+|+++||||+|+|+||+|++|++| .++|.+++|+.++||.|||||.|+++.+++||||++|+||++|+|||||+
T Consensus       335 r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~  414 (489)
T KOG0156|consen  335 RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLD  414 (489)
T ss_pred             CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcC
Confidence            66999999999999999999999999999 78999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q 015580          400 NL  401 (404)
Q Consensus       400 ~~  401 (404)
                      +.
T Consensus       415 ~~  416 (489)
T KOG0156|consen  415 SN  416 (489)
T ss_pred             Cc
Confidence            63


No 2  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=6.7e-67  Score=485.70  Aligned_cols=373  Identities=42%  Similarity=0.813  Sum_probs=306.9

Q ss_pred             ccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCcccccc
Q 015580           27 SRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECS  106 (404)
Q Consensus        27 ~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~  106 (404)
                      ..++..+.||||+++|++||+..+........++.++.+++++||++|+++++++++|+++||+++++++.+++..|+.+
T Consensus        32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            44556678999999999999876654222346778899999999999999999999999999999999999887777655


Q ss_pred             CcchhhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhccccc-eehHhhh-hhHHHHHHHHH
Q 015580          107 YPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQ  184 (404)
Q Consensus       107 ~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~vdl~~~-~~~~~~~~~~~  184 (404)
                      .+......+|..+++..+|+.|+++|+++.+.|++.++...+.+.+.+.+..+++.|... .+|+.+. ..+++++++++
T Consensus       112 ~~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~  191 (490)
T PLN02500        112 YPRSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKH  191 (490)
T ss_pred             CchHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHH
Confidence            544444556655788889999999999999999998887635678888888888888655 7999999 99999999999


Q ss_pred             HccCCchH-HHHHHHHHHHHHHhhhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccC---CccchHHHHHHc
Q 015580          185 LMSFDPNE-WTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQARTKVAEALSLVVRQRRKESESG---ERKNDMLEALLA  260 (404)
Q Consensus       185 ~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~l~~l~~  260 (404)
                      +||.+.+. ...++.+.+..+.......+..+|...+++..++++++.+.+.++++++++....+   ....|+++.+++
T Consensus       192 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  271 (490)
T PLN02500        192 IMSMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLK  271 (490)
T ss_pred             HhCCCCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHh
Confidence            99987643 33444444554444433333344444455666778888888888888876542111   235689999997


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc--CCCCCCChhhhccCccHHHHH
Q 015580          261 GDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKK--SKQEPLEWNDYKSMPFTQCVV  338 (404)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~--~~~~~~~~~~l~~lp~l~a~i  338 (404)
                      .. .++++++.+.+..+++||+|||+++++|++++|++||++|+|+|+|++++.+..  ..++.++.+++++||||+|||
T Consensus       272 ~~-~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avi  350 (490)
T PLN02500        272 HS-NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVI  350 (490)
T ss_pred             cc-CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHH
Confidence            64 489999999999999999999999999999999999999999999999987421  123468999999999999999


Q ss_pred             HhhhhccCCCccccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCcc
Q 015580          339 NETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVN  400 (404)
Q Consensus       339 ~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  400 (404)
                      +||+|++|+++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++
T Consensus       351 kEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~  412 (490)
T PLN02500        351 NETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQN  412 (490)
T ss_pred             HHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCC
Confidence            99999999999888999999999999999999999999999999999999999999999974


No 3  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.6e-65  Score=471.32  Aligned_cols=364  Identities=38%  Similarity=0.728  Sum_probs=310.6

Q ss_pred             CccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccccccCc
Q 015580           29 SRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP  108 (404)
Q Consensus        29 ~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  108 (404)
                      +...+.||||+++|++||+..+.+     ++..++.+++++||++|+++++++++++++||+++++++.++...+.....
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~  101 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEFLK-----QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYP  101 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHHHH-----hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCC
Confidence            455578899999999999988754     567789999999999999999999999999999999999877766654444


Q ss_pred             chhhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhccccc-eehHhhh-hhHHHHHHHHHHc
Q 015580          109 GSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQLM  186 (404)
Q Consensus       109 ~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~vdl~~~-~~~~~~~~~~~~f  186 (404)
                      ......+|..+++..+|+.|+++|+.+.+.|+...+...+.+.+.+.+++++++|... ++|+.+. ..++++++.+++|
T Consensus       102 ~~~~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~  181 (463)
T PLN02774        102 QSMLDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALLSALKQIA  181 (463)
T ss_pred             HHHHHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHHHHHHHHc
Confidence            4444567766788889999999999999999998887546788888899999988764 7999999 9999999999999


Q ss_pred             cCCchHHHHHHHHHHHHHHhhhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccchHHHHHHcCC---C
Q 015580          187 SFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQARTKVAEALSLVVRQRRKESESGERKNDMLEALLAGD---D  263 (404)
Q Consensus       187 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~l~~~~---~  263 (404)
                      |.+.+....++.+.+..+......+|.++|...+++..++++++.+.+.+.++++++.   +...+|+++.+++..   .
T Consensus       182 g~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~~~~~d~l~~ll~~~~~~~  258 (463)
T PLN02774        182 GTLSKPISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRAS---GETHTDMLGYLMRKEGNRY  258 (463)
T ss_pred             CCCChHHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhc---CCCcccHHHHHHhCccCCC
Confidence            9876544445556665555444455656665556677788999999999999888765   234579999998642   2


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhh
Q 015580          264 GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLR  343 (404)
Q Consensus       264 ~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  343 (404)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|++++.+....++.++++++++||||+|||+|++|
T Consensus       259 ~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lR  338 (463)
T PLN02774        259 KLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSR  338 (463)
T ss_pred             CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHh
Confidence            48999999999999999999999999999999999999999999999999763223457899999999999999999999


Q ss_pred             ccCCCccccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCcc
Q 015580          344 VANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVN  400 (404)
Q Consensus       344 l~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  400 (404)
                      ++|+++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+++
T Consensus       339 l~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~  395 (463)
T PLN02774        339 LATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDK  395 (463)
T ss_pred             cCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCC
Confidence            999999888999999999999999999999999999999999999999999999974


No 4  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.3e-65  Score=470.21  Aligned_cols=381  Identities=33%  Similarity=0.665  Sum_probs=319.1

Q ss_pred             HHHHHHHHHHHHHhhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHH
Q 015580           12 LYISISTVIFFIIKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPET   91 (404)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~   91 (404)
                      .++++++.++.+..+...+..+.||||+++|++|++..+..    .+++.++.+++++||++++++++++++|+++||++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~   89 (463)
T PLN02196         14 ALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYS----QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEA   89 (463)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHh----cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHH
Confidence            33333444444444555566778999999999999877643    47899999999999999999999999999999999


Q ss_pred             HHHhhhcCCccccccCcchhhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhccccceehHh
Q 015580           92 NRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLME  171 (404)
Q Consensus        92 ~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vdl~  171 (404)
                      +++++.++...+...........+|..+++..+|+.|+++|+++++.|+++++.. +.+.+.+.++++++.|.+..+|+.
T Consensus        90 ~~~vl~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~-~~~~i~~~~~~~~~~~~~~~v~~~  168 (463)
T PLN02196         90 AKFVLVTKSHLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRN-MVPDIESIAQESLNSWEGTQINTY  168 (463)
T ss_pred             HHHHHhCCCCcccccCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHH-HHHHHHHHHHHHHHcCCCCeEEeH
Confidence            9999988777665443333344566568888999999999999999999999988 899999999999999976689999


Q ss_pred             hh-hhHHHHHHHHHHccCCchHHHHHHHHHHHHHHhhhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCc
Q 015580          172 EA-KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQARTKVAEALSLVVRQRRKESESGER  250 (404)
Q Consensus       172 ~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  250 (404)
                      +. ..+++++++.++||.+.......+.+.+..+...+..+|..+|....++..++++++.+.+.+.++++++.   ...
T Consensus       169 ~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~---~~~  245 (463)
T PLN02196        169 QEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQN---GSS  245 (463)
T ss_pred             HHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhc---CCC
Confidence            99 99999999999999886433344444444444333345555554445677788889999999999887665   234


Q ss_pred             cchHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChhhhcc
Q 015580          251 KNDMLEALLAGDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKS  330 (404)
Q Consensus       251 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~  330 (404)
                      ..|+++.++++++.++++++.+.+..+++||+|||+++++|++++|++||++|+++++|++++.+..+.++.++.+++++
T Consensus       246 ~~d~l~~ll~~~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~  325 (463)
T PLN02196        246 HNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKK  325 (463)
T ss_pred             cccHHHHHHhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhc
Confidence            57899999877667999999999999999999999999999999999999999999999999886443456789999999


Q ss_pred             CccHHHHHHhhhhccCCCccccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCcc
Q 015580          331 MPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVN  400 (404)
Q Consensus       331 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  400 (404)
                      ||||+|||+||+|++|+++...|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++
T Consensus       326 l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~  395 (463)
T PLN02196        326 MPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVA  395 (463)
T ss_pred             ChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCC
Confidence            9999999999999999999878999999999999999999999999999999999999999999999964


No 5  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.8e-64  Score=448.72  Aligned_cols=373  Identities=21%  Similarity=0.276  Sum_probs=295.1

Q ss_pred             HHHHHhhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcC
Q 015580           20 IFFIIKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNE   99 (404)
Q Consensus        20 ~~~~~~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~   99 (404)
                      ++++.+...+..++-.|+|+++|++||+..+.+   ...+..+..+.+.++|+++.++.+.++.++|+||+.+++|+.++
T Consensus        18 y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~---~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~   94 (499)
T KOG0158|consen   18 YLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLK---RERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKD   94 (499)
T ss_pred             HHHHHhhhhhhccCCCCCCCCCCcEecHHHHHh---ccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHh
Confidence            333334333333334578888999999999876   22335555555666699999999999999999999999999999


Q ss_pred             Cccccc--cCcchhhh-hhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhccccc-----eehHh
Q 015580          100 GKLFEC--SYPGSISN-LLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-----VLLME  171 (404)
Q Consensus       100 ~~~~~~--~~~~~~~~-~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~vdl~  171 (404)
                      .+.|.+  +....... -++..+++..+|+.|+++|..+.|.|++.++++ +.+.+++.+.++++.+.+.     .+++.
T Consensus        95 F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~-m~~t~~~~~~~l~~~l~~~~~~~~~~~~~  173 (499)
T KOG0158|consen   95 FDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKK-MFPTMEEVGDELVRHLRRKSEGGQEGEIK  173 (499)
T ss_pred             CccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHH-HHHHHHHHHHHHHHHHHHhhcccCCccHH
Confidence            888887  33222222 234478999999999999999999999999998 9999999999999988764     68999


Q ss_pred             hh-hhHHHHHHHHHHccCCchHH---HHHHHHHHHHHHhh-hccCCc------ccchh-----hHHHHHHHHHHHHHHHH
Q 015580          172 EA-KKITFELTVKQLMSFDPNEW---TESLRKEYVLVIEG-FFTVPL------PIFST-----TYRRAIQARTKVAEALS  235 (404)
Q Consensus       172 ~~-~~~~~~~~~~~~fG~~~~~~---~~~~~~~~~~~~~~-~~~~~~------~~~~~-----~~~~~~~~~~~~~~~~~  235 (404)
                      +. .+++.++|+++.||.+.+..   ..++...-...... ....+.      ..|..     .........+.+.+.+.
T Consensus       174 dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~  253 (499)
T KOG0158|consen  174 DLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVN  253 (499)
T ss_pred             HHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHH
Confidence            99 99999999999999987752   12222211111111 111111      00100     00112334455666666


Q ss_pred             HHHHHHhhhhccCCccchHHHHHHcCCC----------CCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHH
Q 015580          236 LVVRQRRKESESGERKNDMLEALLAGDD----------GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQ  305 (404)
Q Consensus       236 ~~i~~~~~~~~~~~~~~~~l~~l~~~~~----------~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~  305 (404)
                      +.++.+..+   +....|+++.+++...          .++.+++++++..+++||.||||+++++++|+|++||++|+|
T Consensus       254 ~~v~~R~~~---~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~k  330 (499)
T KOG0158|consen  254 SRVEQREKE---NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDK  330 (499)
T ss_pred             HHHHHHHhc---CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHH
Confidence            777776443   4678999999997643          499999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCcccccccccccccc-CeeeCCCCEEeecchhhhcCCc
Q 015580          306 LKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIK-GYTIPKGWRVFASFRAVHLDHD  384 (404)
Q Consensus       306 lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~-g~~ip~g~~v~~~~~~~~~d~~  384 (404)
                      ||+||+++..   ....+++|.+.+|+||++||+||||+||+++.+.|.|++|++++ ++.||||+.|.++++++||||+
T Consensus       331 LreEI~~~~~---~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~  407 (499)
T KOG0158|consen  331 LREEIDEVLE---EKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPE  407 (499)
T ss_pred             HHHHHHHHhc---ccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcc
Confidence            9999999976   23339999999999999999999999999999899999999999 9999999999999999999999


Q ss_pred             cCCCCCCCCCCCcCccCC
Q 015580          385 HFKDARSFNPWRWQVNLS  402 (404)
Q Consensus       385 ~~~~p~~F~PeRfl~~~~  402 (404)
                      +||||++|+||||.++++
T Consensus       408 ~~p~Pe~F~PERF~~~~~  425 (499)
T KOG0158|consen  408 YWPEPEKFKPERFEEENN  425 (499)
T ss_pred             cCCCcccCCCccCCCCcc
Confidence            999999999999998753


No 6  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.2e-63  Score=459.33  Aligned_cols=372  Identities=42%  Similarity=0.803  Sum_probs=315.0

Q ss_pred             CccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccccccCc
Q 015580           29 SRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP  108 (404)
Q Consensus        29 ~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  108 (404)
                      +++.++||||.++|++||++.+.......+++.++.+++++||+||+++++++++||++||+++++++.++...++.++.
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            45677899999999999998875422234688999999999999999999999999999999999999988877766554


Q ss_pred             chhhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhccccc-eehHhhh-hhHHHHHHHHHHc
Q 015580          109 GSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQLM  186 (404)
Q Consensus       109 ~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~vdl~~~-~~~~~~~~~~~~f  186 (404)
                      .....++|..+++..+|+.|+++|+++.+.|+..++...+.+.+.+.++++++.|..+ .+|+.+. ..++++++++++|
T Consensus        83 ~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~  162 (452)
T PLN03141         83 KSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKALI  162 (452)
T ss_pred             hhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHHHHc
Confidence            4455667766788899999999999999999887777645678888888888887644 7899999 9999999999999


Q ss_pred             cCCchHHHHHHHHHHHHHHhhhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccCC-----ccchHHHHHHcC
Q 015580          187 SFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQARTKVAEALSLVVRQRRKESESGE-----RKNDMLEALLAG  261 (404)
Q Consensus       187 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~l~~l~~~  261 (404)
                      |.+......++.+.+..+......+|.++|...+.+..++++++.+.+.+++++++...+.+.     ...|+++.++++
T Consensus       163 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~  242 (452)
T PLN03141        163 SLEPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRD  242 (452)
T ss_pred             CCCchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhc
Confidence            987765556666677766666556666666555566667889999999999988876522111     246899999876


Q ss_pred             C-CCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc-CCCCCCChhhhccCccHHHHHH
Q 015580          262 D-DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKK-SKQEPLEWNDYKSMPFTQCVVN  339 (404)
Q Consensus       262 ~-~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~~~~l~~lp~l~a~i~  339 (404)
                      . ..++++++...+..+++||+|||+.+++|++++|++||++|+++++|++++.+.. ..++.++.+++.+||||+|||+
T Consensus       243 ~~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~  322 (452)
T PLN03141        243 GSDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVIT  322 (452)
T ss_pred             CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHH
Confidence            3 4589999999999999999999999999999999999999999999999886522 1345689999999999999999


Q ss_pred             hhhhccCCCccccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCcc
Q 015580          340 ETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVN  400 (404)
Q Consensus       340 E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  400 (404)
                      |++|++|+++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+++
T Consensus       323 E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~  383 (452)
T PLN03141        323 ETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEK  383 (452)
T ss_pred             HHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCC
Confidence            9999999998889999999999999999999999999999999999999999999999975


No 7  
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=6e-63  Score=453.60  Aligned_cols=386  Identities=83%  Similarity=1.307  Sum_probs=310.8

Q ss_pred             HHHHHHHHHHHhhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHH
Q 015580           14 ISISTVIFFIIKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNR   93 (404)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~   93 (404)
                      +++..+..++..+....+.++||||.++|++|++..+.+.....+++.++.+++++||++|++++++.++++++||++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~   90 (472)
T PLN02987         11 SSLAAIFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNR   90 (472)
T ss_pred             HHHHHHHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHH
Confidence            33444444455555566677899999999999998875322224688899999999999999999999999999999999


Q ss_pred             HhhhcCCccccccCcchhhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhccccceehHhhh
Q 015580           94 FILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLMEEA  173 (404)
Q Consensus        94 ~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vdl~~~  173 (404)
                      +++.++...|+.++.......+|+++++..+|+.|+++|+++.+.++...+.......+.+.++..++.|.+ ++++.+.
T Consensus        91 ~il~~~~~~f~~~~~~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~  169 (472)
T PLN02987         91 FILQNEGKLFECSYPGSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWSS-RVLLMEE  169 (472)
T ss_pred             HHHhCCCceEEecCcHHHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhcc-ceehHHH
Confidence            999988877765555555677776788889999999999998764444455442223455666666777753 7899999


Q ss_pred             -hhHHHHHHHHHHccCCchHHHHHHHHHHHHHHhhhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccC-Ccc
Q 015580          174 -KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQARTKVAEALSLVVRQRRKESESG-ERK  251 (404)
Q Consensus       174 -~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~  251 (404)
                       .+++++++++++||.+.....+.+.+.+......+...+..+....+++..+.++++.+.+.++++++++....+ ...
T Consensus       170 ~~~~t~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~  249 (472)
T PLN02987        170 AKKITFELTVKQLMSFDPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKK  249 (472)
T ss_pred             HHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccc
Confidence             999999999999998765433444444444444333322222233567788889999999999999987652222 235


Q ss_pred             chHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChhhhccC
Q 015580          252 NDMLEALLAGDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSM  331 (404)
Q Consensus       252 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l  331 (404)
                      .|+++.+++...+++++++.+.+..+++||+|||+.+++|++++|++||++|+++++|++++.+..+.+..++.+++.+|
T Consensus       250 ~d~l~~ll~~~~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~l  329 (472)
T PLN02987        250 KDMLAALLASDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSM  329 (472)
T ss_pred             ccHHHHHHhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcC
Confidence            79999999876679999999999999999999999999999999999999999999999998764334566899999999


Q ss_pred             ccHHHHHHhhhhccCCCccccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCcc
Q 015580          332 PFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVN  400 (404)
Q Consensus       332 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  400 (404)
                      ||++||++|++|++|+++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+++
T Consensus       330 pyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  398 (472)
T PLN02987        330 PFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSN  398 (472)
T ss_pred             hHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCC
Confidence            999999999999999999888999999999999999999999999999999999999999999999974


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.6e-63  Score=466.69  Aligned_cols=366  Identities=16%  Similarity=0.202  Sum_probs=283.9

Q ss_pred             CccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhcc-CeeeecccCccEEEecChHHHHHhhhcCCccccccC
Q 015580           29 SRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFG-SIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSY  107 (404)
Q Consensus        29 ~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  107 (404)
                      .++.++||||+++|++||+..+.+   ....+.++.++.++|| +++++++|+.++|+++||+.+++++.++...|.+++
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~---~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp  129 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLK---NRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRP  129 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhcc---CCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCC
Confidence            345678999999999999988743   1124678899999999 899999999999999999999999998888787776


Q ss_pred             cchhhhhhccC---ccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhccc----cc-eehHhhh-hhHHH
Q 015580          108 PGSISNLLGKH---SLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT----DR-VLLMEEA-KKITF  178 (404)
Q Consensus       108 ~~~~~~~~g~~---~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~-~vdl~~~-~~~~~  178 (404)
                      .......+|..   +++..+|+.|+++|+++.+.+........+.+.+++.++.+.+.+.    ++ ++|+.+. ..+++
T Consensus       130 ~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  209 (543)
T PLN02971        130 LTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCG  209 (543)
T ss_pred             cccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHH
Confidence            44444455532   3677889999999999976554443333266666666666665542    22 7999999 99999


Q ss_pred             HHHHHHHccCCchH--------HHHHHHHHHHHHHhhh---c--cCCcccch-------hhHHHHHHHHHHHHHHHHHHH
Q 015580          179 ELTVKQLMSFDPNE--------WTESLRKEYVLVIEGF---F--TVPLPIFS-------TTYRRAIQARTKVAEALSLVV  238 (404)
Q Consensus       179 ~~~~~~~fG~~~~~--------~~~~~~~~~~~~~~~~---~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i  238 (404)
                      +++++++||.+...        ...+..+.+..+....   .  .++.++|.       ...+...+..+.+.+++.+++
T Consensus       210 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  289 (543)
T PLN02971        210 NAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPII  289 (543)
T ss_pred             HHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence            99999999986521        0111222222222211   0  11111221       112334445667788888888


Q ss_pred             HHHhhhhccC--CccchHHHHHHcCC----C-CCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 015580          239 RQRRKESESG--ERKNDMLEALLAGD----D-GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHD  311 (404)
Q Consensus       239 ~~~~~~~~~~--~~~~~~l~~l~~~~----~-~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~  311 (404)
                      +++++..+.+  ....|+++.+++..    . .++++++.+++..+++||+|||+++++|++++|++||++|+|+|+||+
T Consensus       290 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~  369 (543)
T PLN02971        290 DERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEID  369 (543)
T ss_pred             HHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            8775532111  23469999999641    2 389999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCcc-ccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCC
Q 015580          312 EIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISG-VFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDAR  390 (404)
Q Consensus       312 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  390 (404)
                      ++++   .++.++.+++++||||+|||+|++|++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||+
T Consensus       370 ~v~g---~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~  446 (543)
T PLN02971        370 RVVG---KERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPL  446 (543)
T ss_pred             HHhC---CCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcc
Confidence            9987   46778999999999999999999999999984 7899999999999999999999999999999999999999


Q ss_pred             CCCCCCcCcc
Q 015580          391 SFNPWRWQVN  400 (404)
Q Consensus       391 ~F~PeRfl~~  400 (404)
                      +|+||||+++
T Consensus       447 ~F~PeRfl~~  456 (543)
T PLN02971        447 SFKPERHLNE  456 (543)
T ss_pred             ccCcccCCCC
Confidence            9999999974


No 9  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2e-62  Score=457.78  Aligned_cols=368  Identities=21%  Similarity=0.297  Sum_probs=292.9

Q ss_pred             HHhhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCcc
Q 015580           23 IIKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKL  102 (404)
Q Consensus        23 ~~~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~  102 (404)
                      +.+++..+..++||||+++|++|++..+..     ..+.++.+++++||++|++++++.++|+++||+++++++.++...
T Consensus        26 ~~~~~~~~~~~~ppgp~~~Pl~G~l~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~  100 (516)
T PLN02183         26 GLISRLRRRLPYPPGPKGLPIIGNMLMMDQ-----LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSV  100 (516)
T ss_pred             HHHhhccCCCCCCcCCCCCCeeccHHhcCC-----cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhh
Confidence            334555555678999999999999876632     456789999999999999999999999999999999999987766


Q ss_pred             ccccCcchh-hhhhc--cCccccccchhhHHHHHH-hhhhcChhhhhhhhhHHHHHHHHHHHhcccc--c-eehHhhh-h
Q 015580          103 FECSYPGSI-SNLLG--KHSLLLMKGSLHKRMHSL-TMSFANSSIIRDHLLVDIDRLVRLHMDSWTD--R-VLLMEEA-K  174 (404)
Q Consensus       103 ~~~~~~~~~-~~~~g--~~~~~~~~~~~~~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~-~vdl~~~-~  174 (404)
                      |+.+..... ....+  ..+++..+|+.|+++|+. +.+.|+.+.+.. +.+. .+.++.+++.+..  + ++|+.+. .
T Consensus       101 f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~-~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~  178 (516)
T PLN02183        101 FSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAES-WASV-RDEVDSMVRSVSSNIGKPVNIGELIF  178 (516)
T ss_pred             hcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHH-HHHH-HHHHHHHHHHHHhcCCCcEeHHHHHH
Confidence            655433221 22222  356777889999999998 578999888876 6664 4577888888843  2 8999999 9


Q ss_pred             hHHHHHHHHHHccCCchHHHHHHHHHHHHHHhhhc------cCCcc--c-chhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 015580          175 KITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFF------TVPLP--I-FSTTYRRAIQARTKVAEALSLVVRQRRKES  245 (404)
Q Consensus       175 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  245 (404)
                      .++.+++++++||.+.+....++.+.+..+...+.      .+|+.  + +....++..+.++.+.+++.++++++.+..
T Consensus       179 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  258 (516)
T PLN02183        179 TLTRNITYRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKR  258 (516)
T ss_pred             HHHHHHHHhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999998765444445555544433221      12211  1 112244566667778888887777664431


Q ss_pred             cc-------CCccchHHHHHHcC---------------CCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHH
Q 015580          246 ES-------GERKNDMLEALLAG---------------DDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLAL  303 (404)
Q Consensus       246 ~~-------~~~~~~~l~~l~~~---------------~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~  303 (404)
                      ..       ++...|+++.+++.               +..++++++.+.+..+++||+|||+.+++|++++|++||++|
T Consensus       259 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq  338 (516)
T PLN02183        259 KNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDL  338 (516)
T ss_pred             cccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHH
Confidence            11       11345899998862               124899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCccccccccccccccCeeeCCCCEEeecchhhhcCC
Q 015580          304 AQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDH  383 (404)
Q Consensus       304 ~~lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~  383 (404)
                      +|+++|++++++   .++.++.+++++||||+|||+||+|++|+++...|.+.+|++++|+.|||||+|.++.+++||||
T Consensus       339 ~kl~~Ei~~v~~---~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~  415 (516)
T PLN02183        339 KRVQQELADVVG---LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDK  415 (516)
T ss_pred             HHHHHHHHHHcC---CCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCc
Confidence            999999999986   34678999999999999999999999999998789999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCcCcc
Q 015580          384 DHFKDARSFNPWRWQVN  400 (404)
Q Consensus       384 ~~~~~p~~F~PeRfl~~  400 (404)
                      ++|+||++|+||||+++
T Consensus       416 ~~~~dP~~F~PeRfl~~  432 (516)
T PLN02183        416 NSWEDPDTFKPSRFLKP  432 (516)
T ss_pred             cccCCccccCchhhCCC
Confidence            99999999999999974


No 10 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.6e-61  Score=450.19  Aligned_cols=372  Identities=33%  Similarity=0.617  Sum_probs=305.4

Q ss_pred             ccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccC--eeeecccCccEEEecChHHHHHhhhcCCcccc
Q 015580           27 SRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGS--IFTTHIFGEPTVFSADPETNRFILQNEGKLFE  104 (404)
Q Consensus        27 ~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~--v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~  104 (404)
                      ......++||||+++|++|++..+......++++.++.++++|||+  +|++++++.++|+++||+++++++.++ ..|.
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~  114 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFE  114 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Cccc
Confidence            3445567899999999999998886543345789999999999997  799999999999999999999999865 4455


Q ss_pred             ccCcchhhhhhccCccccccchhhHHHHHHhhhhcC-hhhhhhhhhHHHHHHHHHHHhccccc-eehHhhh-hhHHHHHH
Q 015580          105 CSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFAN-SSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELT  181 (404)
Q Consensus       105 ~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~vdl~~~-~~~~~~~~  181 (404)
                      ++.+......+|..++...+|+.|+++|+.+.+.|+ .+++.. +.+.+.+.++++++.+... .+|+.+. ..++++++
T Consensus       115 ~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~-~~~~i~~~v~~~~~~~~~~~~v~~~~~~~~~~~~vi  193 (490)
T PLN02302        115 PGWPESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALST-YIPYIEENVKSCLEKWSKMGEIEFLTELRKLTFKII  193 (490)
T ss_pred             cCCchhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHH-HHHHHHHHHHHHHHHhcCCCCEehHHHHHHHHHHHH
Confidence            554443334566556677899999999999999995 567777 8899999999999988655 7999999 99999999


Q ss_pred             HHHHccCCchHHHHHHHHHHHHHHhhhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccC--CccchHHHHHH
Q 015580          182 VKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQARTKVAEALSLVVRQRRKESESG--ERKNDMLEALL  259 (404)
Q Consensus       182 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~l~  259 (404)
                      ++++||.+.+....++.+.+..+...+..++..+|...+++..++++++.+.+.+.++++++....+  ....|+++.++
T Consensus       194 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll  273 (490)
T PLN02302        194 MYIFLSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLL  273 (490)
T ss_pred             HHHHcCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHH
Confidence            9999998876544445444443333333333334444455666777888899999988876552211  24578999998


Q ss_pred             cC----CCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCC-CCCCChhhhccCccH
Q 015580          260 AG----DDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSK-QEPLEWNDYKSMPFT  334 (404)
Q Consensus       260 ~~----~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~-~~~~~~~~l~~lp~l  334 (404)
                      +.    +..++++++.+.+..+++||+|||+.+++|++++|++||++|+|+|+|++++.+.... ...++++++++||||
T Consensus       274 ~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl  353 (490)
T PLN02302        274 DAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYL  353 (490)
T ss_pred             hhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHH
Confidence            64    2348999999999999999999999999999999999999999999999999863222 223799999999999


Q ss_pred             HHHHHhhhhccCCCccccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCcc
Q 015580          335 QCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVN  400 (404)
Q Consensus       335 ~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  400 (404)
                      +|||+|++|++|+++..+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||+++
T Consensus       354 ~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~  419 (490)
T PLN02302        354 SQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNY  419 (490)
T ss_pred             HHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCC
Confidence            999999999999999888999999999999999999999999999999999999999999999964


No 11 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.6e-61  Score=449.93  Aligned_cols=372  Identities=19%  Similarity=0.286  Sum_probs=295.3

Q ss_pred             HHHHhhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCC
Q 015580           21 FFIIKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEG  100 (404)
Q Consensus        21 ~~~~~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~  100 (404)
                      ++...+..+++.+.||||+++|++||+..+..    .+++.++.+++++||++|++++++.++|+++||+++++++.++.
T Consensus        16 ~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~   91 (499)
T PLN03234         16 FFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEK----FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQD   91 (499)
T ss_pred             HHHHHHhcCCCCCCCcCCCCCCeeccHHhcCC----CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCC
Confidence            33344455566678999999999999887632    36788999999999999999999999999999999999999877


Q ss_pred             ccccccCcchhhh---hhccCccccccchhhHHHHHHh-hhhcChhhhhhhhhHHHHHHHHHHHhcccc----c-eehHh
Q 015580          101 KLFECSYPGSISN---LLGKHSLLLMKGSLHKRMHSLT-MSFANSSIIRDHLLVDIDRLVRLHMDSWTD----R-VLLME  171 (404)
Q Consensus       101 ~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~-~vdl~  171 (404)
                      ..|..+.......   ..|....+...++.|+++|+.+ .+.|+++++.. +.+.+++.++++++.+.+    + ++|+.
T Consensus        92 ~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~~~vd~~  170 (499)
T PLN03234         92 LNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVAS-FRPVREEECQRMMDKIYKAADQSGTVDLS  170 (499)
T ss_pred             ccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHH-hHHHHHHHHHHHHHHHHHhccCCCeEEHH
Confidence            6676554322111   1222222445578999999974 68999998888 899999999999998852    2 79999


Q ss_pred             hh-hhHHHHHHHHHHccCCchHH---HHHHHHHHHHHHhhhc------cCCcc--cc--hhhHHHHHHHHHHHHHHHHHH
Q 015580          172 EA-KKITFELTVKQLMSFDPNEW---TESLRKEYVLVIEGFF------TVPLP--IF--STTYRRAIQARTKVAEALSLV  237 (404)
Q Consensus       172 ~~-~~~~~~~~~~~~fG~~~~~~---~~~~~~~~~~~~~~~~------~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~  237 (404)
                      +. ..++++++++++||.+.+..   ..++.+.+........      .+|++  ++  ....++..++.+++.+.+.++
T Consensus       171 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  250 (499)
T PLN03234        171 ELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQEL  250 (499)
T ss_pred             HHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            99 99999999999999886642   2333333332221111      11211  00  112356677888889999999


Q ss_pred             HHHHhhhhccCCccchHHHHHHcC---C---CCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 015580          238 VRQRRKESESGERKNDMLEALLAG---D---DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHD  311 (404)
Q Consensus       238 i~~~~~~~~~~~~~~~~l~~l~~~---~---~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~  311 (404)
                      ++++++....+....|+++.+++.   +   ..++++++.+++..+++||+|||+++++|++++|++||++|+++|+|++
T Consensus       251 i~~~~~~~~~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~  330 (499)
T PLN03234        251 LDETLDPNRPKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVR  330 (499)
T ss_pred             HHHHHhhcccCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            988765422223456888888753   1   2489999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCcc-ccccccccccccCeeeCCCCEEeecchhhhcCCccC-CCC
Q 015580          312 EIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISG-VFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHF-KDA  389 (404)
Q Consensus       312 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~-~~p  389 (404)
                      ++.+   ..+.++.+++++||||+|||+|++|++|+++. ++|.+.+|++++|+.|||||.|+++.+++||||++| +||
T Consensus       331 ~~~~---~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P  407 (499)
T PLN03234        331 NVIG---DKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNP  407 (499)
T ss_pred             HHhC---CCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCCh
Confidence            9986   45678999999999999999999999999996 479999999999999999999999999999999999 899


Q ss_pred             CCCCCCCcCcc
Q 015580          390 RSFNPWRWQVN  400 (404)
Q Consensus       390 ~~F~PeRfl~~  400 (404)
                      ++|+||||+++
T Consensus       408 ~~F~PeR~l~~  418 (499)
T PLN03234        408 NEFIPERFMKE  418 (499)
T ss_pred             hhcCchhhcCC
Confidence            99999999974


No 12 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.7e-61  Score=451.62  Aligned_cols=364  Identities=20%  Similarity=0.273  Sum_probs=296.6

Q ss_pred             cCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccccccC
Q 015580           28 RSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSY  107 (404)
Q Consensus        28 ~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  107 (404)
                      +++..+.||||.++|++|++..+..     +++.++.+++++||++|++++++.++++++||+++++++.++...|.++.
T Consensus        29 ~~~~~~~pPgp~~~P~iG~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~  103 (517)
T PLN02687         29 GKHKRPLPPGPRGWPVLGNLPQLGP-----KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRP  103 (517)
T ss_pred             CCCCCCCCccCCCCCccccHHhcCC-----chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCC
Confidence            3445568999999999999877743     68899999999999999999999999999999999999998777776654


Q ss_pred             cchhhhhh---ccCccccccchhhHHHHHHhh-hhcChhhhhhhhhHHHHHHHHHHHhcccc---c-eehHhhh-hhHHH
Q 015580          108 PGSISNLL---GKHSLLLMKGSLHKRMHSLTM-SFANSSIIRDHLLVDIDRLVRLHMDSWTD---R-VLLMEEA-KKITF  178 (404)
Q Consensus       108 ~~~~~~~~---g~~~~~~~~~~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~-~vdl~~~-~~~~~  178 (404)
                      .......+   +..+++..+|+.|+++|+.+. +.|+.+++.+ +.+.+.+.+.++++.+..   + ++|+.+. ..+++
T Consensus       104 ~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~  182 (517)
T PLN02687        104 PNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDD-FRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTT  182 (517)
T ss_pred             CccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHH-hHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHH
Confidence            43322222   234566677999999999998 7999988888 899999999999988853   2 7999999 99999


Q ss_pred             HHHHHHHccCCchH-----HHHHHHHHHHHHHhhhc------cCCc--ccch-hhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015580          179 ELTVKQLMSFDPNE-----WTESLRKEYVLVIEGFF------TVPL--PIFS-TTYRRAIQARTKVAEALSLVVRQRRKE  244 (404)
Q Consensus       179 ~~~~~~~fG~~~~~-----~~~~~~~~~~~~~~~~~------~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~  244 (404)
                      ++++.++||.+...     ....+.+.+..+.....      .+|.  +++. ...++..+..+++.+.+.++++++++.
T Consensus       183 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~  262 (517)
T PLN02687        183 NALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAA  262 (517)
T ss_pred             HHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999976421     23344444444433211      1221  1111 123455566777888888888888765


Q ss_pred             hcc-CCccchHHHHHHcC---------CCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 015580          245 SES-GERKNDMLEALLAG---------DDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIR  314 (404)
Q Consensus       245 ~~~-~~~~~~~l~~l~~~---------~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~  314 (404)
                      .+. ++...|+++.+++.         +..++++++.+.+..+++||+|||+++++|++++|++||++|+++++|++++.
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  342 (517)
T PLN02687        263 GQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVV  342 (517)
T ss_pred             ccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence            221 23456899999864         12489999999999999999999999999999999999999999999999987


Q ss_pred             hhcCCCCCCChhhhccCccHHHHHHhhhhccCCCc-cccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCC
Q 015580          315 AKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFN  393 (404)
Q Consensus       315 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  393 (404)
                      +   .++.++.+++++||||+|||+||+|++|+++ .++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+
T Consensus       343 ~---~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~  419 (517)
T PLN02687        343 G---RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFR  419 (517)
T ss_pred             C---CCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCC
Confidence            6   4567899999999999999999999999999 47999999999999999999999999999999999999999999


Q ss_pred             CCCcCcc
Q 015580          394 PWRWQVN  400 (404)
Q Consensus       394 PeRfl~~  400 (404)
                      ||||+++
T Consensus       420 PeRfl~~  426 (517)
T PLN02687        420 PDRFLPG  426 (517)
T ss_pred             chhcCCC
Confidence            9999974


No 13 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=5.2e-62  Score=452.75  Aligned_cols=366  Identities=19%  Similarity=0.216  Sum_probs=289.3

Q ss_pred             HhhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccc
Q 015580           24 IKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLF  103 (404)
Q Consensus        24 ~~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~  103 (404)
                      .++..+.....+|||+++|++|++..+..     +++..+.+++++||++|+++++++++|+++||+++++++.++...|
T Consensus        20 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~   94 (482)
T PTZ00404         20 YKKYKKIHKNELKGPIPIPILGNLHQLGN-----LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNF   94 (482)
T ss_pred             HHHhhhccCCCCCCCCCCCeeccHhhhcc-----cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhh
Confidence            33444455677899999999999988743     6889999999999999999999999999999999999998766555


Q ss_pred             cccCcch--hhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhcccc----c-eehHhhh-hh
Q 015580          104 ECSYPGS--ISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD----R-VLLMEEA-KK  175 (404)
Q Consensus       104 ~~~~~~~--~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~-~vdl~~~-~~  175 (404)
                      ..+....  ....+ +.+++..+|+.|+++|+++.+.|+...+.+ +.+.+.+.++++++.+.+    + .+|+.+. ..
T Consensus        95 ~~r~~~~~~~~~~~-~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~  172 (482)
T PTZ00404         95 SDRPKIPSIKHGTF-YHGIVTSSGEYWKRNREIVGKAMRKTNLKH-IYDLLDDQVDVLIESMKKIESSGETFEPRYYLTK  172 (482)
T ss_pred             cCCCCcceeeeecc-CCceeccChHHHHHHHHHHHHHHhhhcccc-HHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHH
Confidence            4432211  11223 367888999999999999999999999988 899999999999998753    2 6999999 99


Q ss_pred             HHHHHHHHHHccCCchHH-------HHHHHHHHHHHHhhhcc----CCcccchh----hHHHHHHHHHHHHHHHHHHHHH
Q 015580          176 ITFELTVKQLMSFDPNEW-------TESLRKEYVLVIEGFFT----VPLPIFST----TYRRAIQARTKVAEALSLVVRQ  240 (404)
Q Consensus       176 ~~~~~~~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~  240 (404)
                      ++++++++++||.+.+..       ...+.+.+..+......    .+..+..+    ......+..+++.+.+.+.+++
T Consensus       173 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  252 (482)
T PTZ00404        173 FTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHE  252 (482)
T ss_pred             HHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999875421       13344444333322211    00001011    1122334456667777777766


Q ss_pred             HhhhhccCCccchHHHHHHcCCCCCCHH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 015580          241 RRKESESGERKNDMLEALLAGDDGFSDE---EIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKK  317 (404)
Q Consensus       241 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~---~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~  317 (404)
                      +++..+. ....|+++.++++.++.+++   ++++++..+++||+|||+.+++|++++|++||++|+|+++|++++.+  
T Consensus       253 ~~~~~~~-~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~--  329 (482)
T PTZ00404        253 HLKTIDP-EVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN--  329 (482)
T ss_pred             HHHccCC-CCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhc--
Confidence            5543111 23578999999763333333   48889999999999999999999999999999999999999999987  


Q ss_pred             CCCCCCChhhhccCccHHHHHHhhhhccCCCcc-ccccccccccc-cCeeeCCCCEEeecchhhhcCCccCCCCCCCCCC
Q 015580          318 SKQEPLEWNDYKSMPFTQCVVNETLRVANIISG-VFRRAMTDINI-KGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPW  395 (404)
Q Consensus       318 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~Pe  395 (404)
                       ..+.++.+++++||||+|||+||||++|+++. ++|.+.+|+++ +|+.|||||.|.++.+++||||++|+||++|+||
T Consensus       330 -~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~Pe  408 (482)
T PTZ00404        330 -GRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPS  408 (482)
T ss_pred             -CCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcc
Confidence             34568999999999999999999999999994 79999999999 9999999999999999999999999999999999


Q ss_pred             CcCcc
Q 015580          396 RWQVN  400 (404)
Q Consensus       396 Rfl~~  400 (404)
                      ||+++
T Consensus       409 Rwl~~  413 (482)
T PTZ00404        409 RFLNP  413 (482)
T ss_pred             ccCCC
Confidence            99974


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.9e-61  Score=450.28  Aligned_cols=363  Identities=19%  Similarity=0.216  Sum_probs=288.4

Q ss_pred             cccCCCCCcCCcccchhHHHHHHhh--------------cCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhh
Q 015580           31 RLRLPPGSLGLPFLGETLQLIAAYK--------------TENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFIL   96 (404)
Q Consensus        31 ~~~~pp~p~~~P~~G~~~~~~~~~~--------------~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~   96 (404)
                      ....||||+++|++||+..+.....              ..+....+.+|+++||++|++++++.++|+++||+.+++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            5557899999999999988753100              12334467889999999999999999999999999999999


Q ss_pred             hcCCccccccCcc---hhhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhcccc-----c-e
Q 015580           97 QNEGKLFECSYPG---SISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD-----R-V  167 (404)
Q Consensus        97 ~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~-~  167 (404)
                      .++.. +.++...   .....+| .+++..+|+.|+++|+.+.+.|+.+++.. +.+.+.+.++++++.+..     + +
T Consensus       120 ~~~~~-~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKYNT-VTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAPAFMGDRLKG-YAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcCCC-CCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhcccccCHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            87643 3233211   1233455 67888999999999999999999999988 889999999999988852     2 7


Q ss_pred             ehHhhh-hhHHHHHHHHHHccCCchHH--HHHHHHHHHHHHhhh---ccCCc--ccchhhHHHHHHHHHHHHHHHHHHHH
Q 015580          168 LLMEEA-KKITFELTVKQLMSFDPNEW--TESLRKEYVLVIEGF---FTVPL--PIFSTTYRRAIQARTKVAEALSLVVR  239 (404)
Q Consensus       168 vdl~~~-~~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~  239 (404)
                      +|+.+. ..++++++++++||.+....  ..+..+.+.......   ..+|.  ++|....++..+..+++.+++.+.++
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~  276 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQ  276 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHH
Confidence            899999 99999999999999876431  111112222211111   11221  22332334455567788888888888


Q ss_pred             HHhhhhccC---CccchHHHHHHcCC-------CCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHH
Q 015580          240 QRRKESESG---ERKNDMLEALLAGD-------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEE  309 (404)
Q Consensus       240 ~~~~~~~~~---~~~~~~l~~l~~~~-------~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E  309 (404)
                      ++++..+.+   ....|+++.++++.       ..++++++.+.+..+++||+|||+++++|++++|++||++|+|+|+|
T Consensus       277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~E  356 (516)
T PLN02290        277 SRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAE  356 (516)
T ss_pred             HHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            876542111   23568999998641       13788999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCccccccccccccccCeeeCCCCEEeecchhhhcCCccC-CC
Q 015580          310 HDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHF-KD  388 (404)
Q Consensus       310 i~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~-~~  388 (404)
                      ++++++    ++.++.+++++||||+|||+||+|++|+++.++|.+.+|++++|+.|||||.|+++.+++||||++| +|
T Consensus       357 i~~v~~----~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~d  432 (516)
T PLN02290        357 VAEVCG----GETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKD  432 (516)
T ss_pred             HHHHhC----CCCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCC
Confidence            999986    2478999999999999999999999999998899999999999999999999999999999999999 89


Q ss_pred             CCCCCCCCcCcc
Q 015580          389 ARSFNPWRWQVN  400 (404)
Q Consensus       389 p~~F~PeRfl~~  400 (404)
                      |++|+||||+++
T Consensus       433 P~~F~PeRfl~~  444 (516)
T PLN02290        433 ANEFNPDRFAGR  444 (516)
T ss_pred             hhhcCccccCCC
Confidence            999999999964


No 15 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.8e-61  Score=446.69  Aligned_cols=386  Identities=18%  Similarity=0.243  Sum_probs=303.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEE
Q 015580            6 LVYDLVLYISISTVIFFIIKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVF   85 (404)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vv   85 (404)
                      ++.+.+..++.++..|++.+...+...+.||||+++|++|++..+.     .+++.++.+++++||++|+++++++++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~vv   78 (504)
T PLN00110          4 LLELAAATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLG-----NMPHVALAKMAKRYGPVMFLKMGTNSMVV   78 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhcC-----CchHHHHHHHHHHhCCeEEEEcCCccEEE
Confidence            3344444455555555555556667788999999999999986663     35789999999999999999999999999


Q ss_pred             ecChHHHHHhhhcCCccccccCcchh--hhhhc-cCccccccchhhHHHHHHhhh-hcChhhhhhhhhHHHHHHHHHHHh
Q 015580           86 SADPETNRFILQNEGKLFECSYPGSI--SNLLG-KHSLLLMKGSLHKRMHSLTMS-FANSSIIRDHLLVDIDRLVRLHMD  161 (404)
Q Consensus        86 v~~p~~~~~i~~~~~~~~~~~~~~~~--~~~~g-~~~~~~~~~~~~~~~R~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~  161 (404)
                      ++||+++++++.++...|..+.....  ....| ..+++..+|+.|+++|+.+++ .|+.+.+.. +.+.+.+.+..+++
T Consensus        79 v~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~-~~~~i~~~~~~~~~  157 (504)
T PLN00110         79 ASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALED-WSQVRTVELGHMLR  157 (504)
T ss_pred             ECCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHH-hhHHHHHHHHHHHH
Confidence            99999999999987767766543221  12233 346777789999999999985 788888887 77777777777776


Q ss_pred             cccc----c-eehHhhh-hhHHHHHHHHHHccCCch----HHHHHHHHHHHHHHhhh------ccCCc--ccch-hhHHH
Q 015580          162 SWTD----R-VLLMEEA-KKITFELTVKQLMSFDPN----EWTESLRKEYVLVIEGF------FTVPL--PIFS-TTYRR  222 (404)
Q Consensus       162 ~~~~----~-~vdl~~~-~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~~~~~~~------~~~~~--~~~~-~~~~~  222 (404)
                      .+.+    + ++|+.+. ..++.+++++++||.+..    ....++.+.+.......      ..+|.  +++. ...++
T Consensus       158 ~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~  237 (504)
T PLN00110        158 AMLELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERG  237 (504)
T ss_pred             HHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHH
Confidence            6632    2 7899999 999999999999998651    12334555444433221      11221  1111 11234


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhccCCccchHHHHHHcC-----CCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 015580          223 AIQARTKVAEALSLVVRQRRKESESGERKNDMLEALLAG-----DDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLT  297 (404)
Q Consensus       223 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~l~~~-----~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~  297 (404)
                      ..+.++.+.+++.+.++++++.........|+++.+++.     +..++++++.+.+..+++||+|||+++++|++++|+
T Consensus       238 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~  317 (504)
T PLN00110        238 MKHLHKKFDKLLTRMIEEHTASAHERKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEML  317 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHH
Confidence            455677777788888887765422222346899999854     235899999999999999999999999999999999


Q ss_pred             cCHHHHHHHHHHHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCcc-ccccccccccccCeeeCCCCEEeecc
Q 015580          298 ETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISG-VFRRAMTDINIKGYTIPKGWRVFASF  376 (404)
Q Consensus       298 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~g~~v~~~~  376 (404)
                      +||++|+|+++|++++.+   .++.++.+++++||||+|||+||+|++|+++. ++|.+.+|++++||.|||||.|+++.
T Consensus       318 ~~P~~~~kl~~Ei~~~~~---~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~  394 (504)
T PLN00110        318 KNPSILKRAHEEMDQVIG---RNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNI  394 (504)
T ss_pred             hCHHHHHHHHHHHHHHhC---CCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeH
Confidence            999999999999999986   45678999999999999999999999999995 78999999999999999999999999


Q ss_pred             hhhhcCCccCCCCCCCCCCCcCcc
Q 015580          377 RAVHLDHDHFKDARSFNPWRWQVN  400 (404)
Q Consensus       377 ~~~~~d~~~~~~p~~F~PeRfl~~  400 (404)
                      +++||||++|+||++|+||||+++
T Consensus       395 ~~~h~d~~~~~dP~~F~PeRfl~~  418 (504)
T PLN00110        395 WAIGRDPDVWENPEEFRPERFLSE  418 (504)
T ss_pred             HHhcCChhhcCCcccCCcccccCC
Confidence            999999999999999999999964


No 16 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.4e-60  Score=445.73  Aligned_cols=392  Identities=22%  Similarity=0.289  Sum_probs=301.5

Q ss_pred             hHhHHHHHHHHHHHHHHHHHHh--hccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCc
Q 015580            4 LTLVYDLVLYISISTVIFFIIK--RSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGE   81 (404)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~   81 (404)
                      +.++.+.+++++.+++++++..  +..+...++||||+++|++|++..+..  ...+++..+.+++++||++|++++++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpPgp~~~pl~G~l~~~~~--~~~~~~~~~~~~~~~yG~i~~~~~g~~   81 (519)
T PLN00168          4 TQLLLLAALLLLPLLLLLLGKHGGRGGKKGRRLPPGPPAVPLLGSLVWLTN--SSADVEPLLRRLIARYGPVVSLRVGSR   81 (519)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcCCCCCcccccHHhhcc--ccccHHHHHHHHHHHhCCeEEEEcCCc
Confidence            4444444443443333333332  333446678999999999999876532  123578899999999999999999999


Q ss_pred             cEEEecChHHHHHhhhcCCccccccCcchhhhhhccC-cccc--ccchhhHHHHH-HhhhhcChhhhhhhhhHHHHHHHH
Q 015580           82 PTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKH-SLLL--MKGSLHKRMHS-LTMSFANSSIIRDHLLVDIDRLVR  157 (404)
Q Consensus        82 ~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~g~~-~~~~--~~~~~~~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~  157 (404)
                      ++|+++||+++++++.++...|+.+........+|.+ +++.  .+|+.|+++|+ ++.+.|+.+++.. +.+.+.+.++
T Consensus        82 ~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~-~~~~~~~~~~  160 (519)
T PLN00168         82 LSVFVADRRLAHAALVERGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRL-FAPARAWVRR  160 (519)
T ss_pred             cEEEECCHHHHHHHHHhcCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHH-HHHHHHHHHH
Confidence            9999999999999999887777665543333445532 3443  67999999986 7899999999998 9999999999


Q ss_pred             HHHhccccc-----eehHhhh-hhHHHHHHHHHHccCCchHH-HHHHHHHHHHHHh---hh----ccCCccc---chhhH
Q 015580          158 LHMDSWTDR-----VLLMEEA-KKITFELTVKQLMSFDPNEW-TESLRKEYVLVIE---GF----FTVPLPI---FSTTY  220 (404)
Q Consensus       158 ~l~~~~~~~-----~vdl~~~-~~~~~~~~~~~~fG~~~~~~-~~~~~~~~~~~~~---~~----~~~~~~~---~~~~~  220 (404)
                      .+++.+...     .+|+.+. ..++.++++.++||.+.+.. ...+...+..+..   ..    ..+|.+.   ....+
T Consensus       161 ~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~  240 (519)
T PLN00168        161 VLVDKLRREAEDAAAPRVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRL  240 (519)
T ss_pred             HHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHH
Confidence            998888542     5789999 99999999999999887532 2222222222211   11    1123211   11123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhc---c-C-------CccchHHHHHHcC------CCCCCHHHHHHHHHHHHHHHHH
Q 015580          221 RRAIQARTKVAEALSLVVRQRRKESE---S-G-------ERKNDMLEALLAG------DDGFSDEEIVDFLVALLVAGYE  283 (404)
Q Consensus       221 ~~~~~~~~~~~~~~~~~i~~~~~~~~---~-~-------~~~~~~l~~l~~~------~~~~~~~~~~~~~~~~~~ag~~  283 (404)
                      ++..+.++++.+++.++++++++...   . +       ....|+++.+++.      +..++++++.+.+..+++||+|
T Consensus       241 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~d  320 (519)
T PLN00168        241 QKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTD  320 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcch
Confidence            44556778888888888887765411   0 0       0145899998853      2358999999999999999999


Q ss_pred             hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCc-ccccccccccccc
Q 015580          284 TTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIK  362 (404)
Q Consensus       284 tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~  362 (404)
                      ||+++++|++++|++||++|+|+++|++++++.  ..+.++.+++++||||+|||+||+|++|+++ ..+|.+.+|++++
T Consensus       321 TTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~--~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~  398 (519)
T PLN00168        321 TTSTALQWIMAELVKNPSIQSKLHDEIKAKTGD--DQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVG  398 (519)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCC
Confidence            999999999999999999999999999999862  2366899999999999999999999999998 4589999999999


Q ss_pred             CeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCcc
Q 015580          363 GYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVN  400 (404)
Q Consensus       363 g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  400 (404)
                      ||.|||||.|.++.+++||||++|+||++|+||||+++
T Consensus       399 g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~  436 (519)
T PLN00168        399 GYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAG  436 (519)
T ss_pred             CEEECCCCEEEEChHHHhcCccccCCccccCcccCCCC
Confidence            99999999999999999999999999999999999964


No 17 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.4e-60  Score=445.61  Aligned_cols=368  Identities=17%  Similarity=0.274  Sum_probs=279.5

Q ss_pred             hhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCcccc
Q 015580           25 KRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFE  104 (404)
Q Consensus        25 ~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~  104 (404)
                      .+...++.+.||||+++|++|++..+.+    ...+..+.+++++||++|+++++++++|+++||+.+++++.++...+.
T Consensus        22 ~~~~~~~~~~pPgp~~~p~~g~l~~~~~----~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~   97 (503)
T PLN02394         22 SKLRGKKLKLPPGPAAVPIFGNWLQVGD----DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFG   97 (503)
T ss_pred             HHHhcCcCCCCcCCCCCCeeeeHHhcCC----CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCcccc
Confidence            3344556778999999999999877643    235789999999999999999999999999999999999987776665


Q ss_pred             ccCcchhhhhh-c--cCccccccchhhHHHHHHhh-hhcChhhhhhhhhHHHHHHHHHHHhccccc------eehHhhh-
Q 015580          105 CSYPGSISNLL-G--KHSLLLMKGSLHKRMHSLTM-SFANSSIIRDHLLVDIDRLVRLHMDSWTDR------VLLMEEA-  173 (404)
Q Consensus       105 ~~~~~~~~~~~-g--~~~~~~~~~~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~vdl~~~-  173 (404)
                      .+........+ |  ..+++..+|+.|+++|+.+. +.|+++.+.. +.+.+++.++++++.+...      .+|+.+. 
T Consensus        98 ~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~  176 (503)
T PLN02394         98 SRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQ-YRYGWEEEADLVVEDVRANPEAATEGVVIRRRL  176 (503)
T ss_pred             CCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHH-hhHHHHHHHHHHHHHHHHhhhccCCcEecHHHH
Confidence            54433332222 3  23477788999999999986 8899888877 7888888888888887532      5899999 


Q ss_pred             hhHHHHHHHHHHccCCchHH----HHHHHHHHHHHHhhhc--------cCCcccch-hhH-HHHHHHHHHHHH-HHHHHH
Q 015580          174 KKITFELTVKQLMSFDPNEW----TESLRKEYVLVIEGFF--------TVPLPIFS-TTY-RRAIQARTKVAE-ALSLVV  238 (404)
Q Consensus       174 ~~~~~~~~~~~~fG~~~~~~----~~~~~~~~~~~~~~~~--------~~~~~~~~-~~~-~~~~~~~~~~~~-~~~~~i  238 (404)
                      ..++++++++++||.+.+..    ..++............        .+|...+. ..+ +........... ....++
T Consensus       177 ~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  256 (503)
T PLN02394        177 QLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFV  256 (503)
T ss_pred             HHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999876531    1112121111111110        01111110 011 111111122222 223345


Q ss_pred             HHHhhhhc----cCCccchHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 015580          239 RQRRKESE----SGERKNDMLEALLAG--DDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDE  312 (404)
Q Consensus       239 ~~~~~~~~----~~~~~~~~l~~l~~~--~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~  312 (404)
                      +++++..+    ..+...|+++.++++  ++.++++++...+..+++||+|||+++++|++++|++||++|+++|+|+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~  336 (503)
T PLN02394        257 DERKKLMSAKGMDKEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDT  336 (503)
T ss_pred             HHHHHHhhhccCCcchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            55543211    112346899999975  345899999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCcc-ccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCC
Q 015580          313 IRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISG-VFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARS  391 (404)
Q Consensus       313 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  391 (404)
                      +.+   .++.++.+++++||||+|||+||+|++|+++. .+|.+.+|++++||.|||||.|.++.+++||||++|+||++
T Consensus       337 v~~---~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~  413 (503)
T PLN02394        337 VLG---PGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEE  413 (503)
T ss_pred             HhC---CCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccc
Confidence            986   34568899999999999999999999999995 57999999999999999999999999999999999999999


Q ss_pred             CCCCCcCcc
Q 015580          392 FNPWRWQVN  400 (404)
Q Consensus       392 F~PeRfl~~  400 (404)
                      |+||||+++
T Consensus       414 F~PeRwl~~  422 (503)
T PLN02394        414 FRPERFLEE  422 (503)
T ss_pred             cCccccCCC
Confidence            999999974


No 18 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=6.3e-60  Score=441.93  Aligned_cols=386  Identities=19%  Similarity=0.264  Sum_probs=304.0

Q ss_pred             HhHHHHHHHHHHHHHHHHHHhhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEE
Q 015580            5 TLVYDLVLYISISTVIFFIIKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTV   84 (404)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~v   84 (404)
                      .++.++++++++..+++.+.+++..++.+.||||.++|++||+..+.     .+++.++.++++|||++|++++++.+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~g~~~~v   78 (514)
T PLN03112          4 FLLSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLG-----PLPHRDLASLCKKYGPLVYLRLGSVDAI   78 (514)
T ss_pred             hHHHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcC-----CchHHHHHHHHHHhCCeEEEEecCccEE
Confidence            34444444455555555566667777778999999999999998773     3688999999999999999999999999


Q ss_pred             EecChHHHHHhhhcCCccccccCcch--hhhhhcc-CccccccchhhHHHHHHhh-hhcChhhhhhhhhHHHHHHHHHHH
Q 015580           85 FSADPETNRFILQNEGKLFECSYPGS--ISNLLGK-HSLLLMKGSLHKRMHSLTM-SFANSSIIRDHLLVDIDRLVRLHM  160 (404)
Q Consensus        85 vv~~p~~~~~i~~~~~~~~~~~~~~~--~~~~~g~-~~~~~~~~~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~l~  160 (404)
                      +++||+++++++.++...|+.+....  ....+|. .+++..+|+.|+++|+.+. +.|+.+++.. +.+.+.+.++.++
T Consensus        79 ~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~-~~~~~~~~~~~lv  157 (514)
T PLN03112         79 TTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLES-FAKHRAEEARHLI  157 (514)
T ss_pred             EECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHH-hhHHHHHHHHHHH
Confidence            99999999999987777776543321  1222332 3455678999999999954 6899999988 8888888888888


Q ss_pred             hcccc----c-eehHhhh-hhHHHHHHHHHHccCCchH-------HHHHHHHHHHHHHhhh--c----cCCc--cc-chh
Q 015580          161 DSWTD----R-VLLMEEA-KKITFELTVKQLMSFDPNE-------WTESLRKEYVLVIEGF--F----TVPL--PI-FST  218 (404)
Q Consensus       161 ~~~~~----~-~vdl~~~-~~~~~~~~~~~~fG~~~~~-------~~~~~~~~~~~~~~~~--~----~~~~--~~-~~~  218 (404)
                      +.+.+    + ++|+.+. ..++++++++++||.+...       ...++.+.+..+....  .    .+|.  ++ +..
T Consensus       158 ~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  237 (514)
T PLN03112        158 QDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYG  237 (514)
T ss_pred             HHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCccc
Confidence            76432    2 7999999 9999999999999987521       2233444443332211  1    1221  11 112


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhcc---CCccchHHHHHHcC----C-CCCCHHHHHHHHHHHHHHHHHhhHHHHH
Q 015580          219 TYRRAIQARTKVAEALSLVVRQRRKESES---GERKNDMLEALLAG----D-DGFSDEEIVDFLVALLVAGYETTSTIMT  290 (404)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~l~~l~~~----~-~~~~~~~~~~~~~~~~~ag~~tt~~~l~  290 (404)
                      ..++..+..+.+.+++.+.++++++..+.   .....|+++.++++    + +.++++++.+.+..+++||+|||+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~  317 (514)
T PLN03112        238 CEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNE  317 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHH
Confidence            23556667778888888888877664211   13346899999864    1 2489999999999999999999999999


Q ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCcc-ccccccccccccCeeeCCC
Q 015580          291 LAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISG-VFRRAMTDINIKGYTIPKG  369 (404)
Q Consensus       291 ~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~g  369 (404)
                      |++++|++||++|+++|+|++++.+   .++.++.+++++||||+|||+||+|++|+++. ++|.+.+|+.++|+.||||
T Consensus       318 ~~l~~L~~~P~vq~kl~~Ei~~~~~---~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkG  394 (514)
T PLN03112        318 WAMAEVIKNPRVLRKIQEELDSVVG---RNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAK  394 (514)
T ss_pred             HHHHHHHhChHHHHHHHHHHHHhcC---CCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCC
Confidence            9999999999999999999999976   45678999999999999999999999999994 6899999999999999999


Q ss_pred             CEEeecchhhhcCCccCCCCCCCCCCCcCc
Q 015580          370 WRVFASFRAVHLDHDHFKDARSFNPWRWQV  399 (404)
Q Consensus       370 ~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~  399 (404)
                      |.|.++.+++||||++|+||++|+||||++
T Consensus       395 t~v~~~~~~~h~d~~~~~dP~~F~PeRf~~  424 (514)
T PLN03112        395 TRVFINTHGLGRNTKIWDDVEEFRPERHWP  424 (514)
T ss_pred             CEEEEehHHhhCCcccCCChhhcCCcccCC
Confidence            999999999999999999999999999875


No 19 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.1e-59  Score=438.24  Aligned_cols=371  Identities=20%  Similarity=0.294  Sum_probs=287.2

Q ss_pred             HhhccCccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccc
Q 015580           24 IKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLF  103 (404)
Q Consensus        24 ~~~~~~~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~  103 (404)
                      .....++..+.||||+++|++||+..+..    .+++..+.+++++||++|++++++.++|+++||+.+++++.++...|
T Consensus        20 ~~~~~~~~~~~ppgp~~~p~~G~l~~l~~----~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~   95 (502)
T PLN02966         20 YQKPKTKRYKLPPGPSPLPVIGNLLQLQK----LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNF   95 (502)
T ss_pred             HhccccCCCCCCcCCCCCCeeccHHhcCC----CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccc
Confidence            33444455678999999999999988732    36889999999999999999999999999999999999998777666


Q ss_pred             cccCcchhhhh--hccCcc-ccccchhhHHHHHH-hhhhcChhhhhhhhhHHHHHHHHHHHhcccc----c-eehHhhh-
Q 015580          104 ECSYPGSISNL--LGKHSL-LLMKGSLHKRMHSL-TMSFANSSIIRDHLLVDIDRLVRLHMDSWTD----R-VLLMEEA-  173 (404)
Q Consensus       104 ~~~~~~~~~~~--~g~~~~-~~~~~~~~~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~-~vdl~~~-  173 (404)
                      .++........  .|...+ +..+|+.|+.+|+. +.+.|+..++.. +.+.+.+.++++++.|.+    + ++|+.+. 
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~  174 (502)
T PLN02966         96 ADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVAT-FKHVREEEARRMMDKINKAADKSEVVDISELM  174 (502)
T ss_pred             cCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHHHHhccCCCceeHHHHH
Confidence            54443222222  222223 44568999999998 788999999987 999999999999998853    2 7999999 


Q ss_pred             hhHHHHHHHHHHccCCchH---HHHHHHHHHHHHHhhhc------cCCcc--cc-hhhH-HHHHHHHHHHHHHHHHHHHH
Q 015580          174 KKITFELTVKQLMSFDPNE---WTESLRKEYVLVIEGFF------TVPLP--IF-STTY-RRAIQARTKVAEALSLVVRQ  240 (404)
Q Consensus       174 ~~~~~~~~~~~~fG~~~~~---~~~~~~~~~~~~~~~~~------~~~~~--~~-~~~~-~~~~~~~~~~~~~~~~~i~~  240 (404)
                      ..++++++++++||.+.+.   ...++.+.+........      .+|..  ++ ...+ +......++..+.+.+.+++
T Consensus       175 ~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  254 (502)
T PLN02966        175 LTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNE  254 (502)
T ss_pred             HHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987653   22233333322221111      12210  11 0111 12233455566667776666


Q ss_pred             HhhhhccCCccchHHHHHHcC------CCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 015580          241 RRKESESGERKNDMLEALLAG------DDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIR  314 (404)
Q Consensus       241 ~~~~~~~~~~~~~~l~~l~~~------~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~  314 (404)
                      ..+.........++++.+++.      +..++++++.+.+..+++||+|||+++++|++++|++||++|+|+++|++++.
T Consensus       255 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~  334 (502)
T PLN02966        255 TLDPKRVKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYM  334 (502)
T ss_pred             HHhccccccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            543211112346888888853      23489999999999999999999999999999999999999999999999998


Q ss_pred             hhcCCCCCCChhhhccCccHHHHHHhhhhccCCCcc-ccccccccccccCeeeCCCCEEeecchhhhcCCccC-CCCCCC
Q 015580          315 AKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISG-VFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHF-KDARSF  392 (404)
Q Consensus       315 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F  392 (404)
                      +.. .++.++.+++++||||+|||+|++|++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++| +||++|
T Consensus       335 ~~~-~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F  413 (502)
T PLN02966        335 KEK-GSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEF  413 (502)
T ss_pred             ccc-CCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhC
Confidence            631 23467999999999999999999999999995 689999999999999999999999999999999999 999999


Q ss_pred             CCCCcCcc
Q 015580          393 NPWRWQVN  400 (404)
Q Consensus       393 ~PeRfl~~  400 (404)
                      +||||+++
T Consensus       414 ~PeRwl~~  421 (502)
T PLN02966        414 RPERFLEK  421 (502)
T ss_pred             ChhhhcCC
Confidence            99999974


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=3.9e-60  Score=441.35  Aligned_cols=360  Identities=28%  Similarity=0.441  Sum_probs=303.3

Q ss_pred             CCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccccccCcchhh--
Q 015580           35 PPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSIS--  112 (404)
Q Consensus        35 pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~--  112 (404)
                      ||||+++|++||+..+.+   .++++.++.++++|||+||+++++++++++|+||+.+++++..+...++........  
T Consensus         1 Ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~   77 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR---KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEI   77 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT---THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC---CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccc
Confidence            899999999999999974   347899999999999999999999999999999999999999888777655332222  


Q ss_pred             --hhhccCccccccchhhHHHHHHhhhhcChh-hhhhhhhHHHHHHHHHHHhccccc-----eehHhhh-hhHHHHHHHH
Q 015580          113 --NLLGKHSLLLMKGSLHKRMHSLTMSFANSS-IIRDHLLVDIDRLVRLHMDSWTDR-----VLLMEEA-KKITFELTVK  183 (404)
Q Consensus       113 --~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-----~vdl~~~-~~~~~~~~~~  183 (404)
                        ...++.+++..+|+.|+.+|+.+.+.|+.. .. . +.+.+.+.++++++.+...     .+|+.++ ..++++++++
T Consensus        78 ~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~-~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~  155 (463)
T PF00067_consen   78 FRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-K-LEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGR  155 (463)
T ss_dssp             HHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-H-HHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccc-c-cccccccccccccccccccccccceeeeeccccccccccccc
Confidence              234458899999999999999999999988 44 5 8888888888888888654     5999999 9999999999


Q ss_pred             HHccCCchH----HHHHHHHHHHHHHhhh--------ccCC--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccC-
Q 015580          184 QLMSFDPNE----WTESLRKEYVLVIEGF--------FTVP--LPIFSTTYRRAIQARTKVAEALSLVVRQRRKESESG-  248 (404)
Q Consensus       184 ~~fG~~~~~----~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  248 (404)
                      ++||.+.+.    ...++.+.+..+...+        ..+|  .+++...+++..++++.+.+.+.++++++++..+.+ 
T Consensus       156 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  235 (463)
T PF00067_consen  156 VLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGD  235 (463)
T ss_dssp             HHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSS
T ss_pred             ccccceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999987552    2233444444443221        1122  234555667777788999999999999988874443 


Q ss_pred             CccchHHHHHHcCC------CCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCC
Q 015580          249 ERKNDMLEALLAGD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEP  322 (404)
Q Consensus       249 ~~~~~~l~~l~~~~------~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~  322 (404)
                      ....|+++.+++..      .+++++++.+.+..+++||++||+.+++|++++|++||++|+++|+|++++.+   .++.
T Consensus       236 ~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---~~~~  312 (463)
T PF00067_consen  236 ESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLG---DGRE  312 (463)
T ss_dssp             SSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTT---TSSS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccc
Confidence            46789999998652      26899999999999999999999999999999999999999999999999975   4558


Q ss_pred             CChhhhccCccHHHHHHhhhhccCCCc-cccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCccC
Q 015580          323 LEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVNL  401 (404)
Q Consensus       323 ~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~  401 (404)
                      ++.+++++||||+|||+||+|++|+++ .++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||+++.
T Consensus       313 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~  392 (463)
T PF00067_consen  313 ITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDER  392 (463)
T ss_dssp             HHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            899999999999999999999999999 8899999999999999999999999999999999999999999999999975


Q ss_pred             C
Q 015580          402 S  402 (404)
Q Consensus       402 ~  402 (404)
                      .
T Consensus       393 ~  393 (463)
T PF00067_consen  393 G  393 (463)
T ss_dssp             S
T ss_pred             c
Confidence            3


No 21 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.5e-60  Score=435.87  Aligned_cols=364  Identities=27%  Similarity=0.438  Sum_probs=292.6

Q ss_pred             cccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCcc--ccccCc
Q 015580           31 RLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKL--FECSYP  108 (404)
Q Consensus        31 ~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~--~~~~~~  108 (404)
                      ....||||.++|++|++.++....  .+...+..++..+||++|+.|++|.++++++||+.+++|+.++...  +...+.
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~  110 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPL--EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYP  110 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcch--hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHH
Confidence            667889999999999999997633  4678899999999999999999999999999999999999744333  445566


Q ss_pred             chhhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhccccc----eehHhhh-hhHHHHHHHH
Q 015580          109 GSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR----VLLMEEA-KKITFELTVK  183 (404)
Q Consensus       109 ~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~vdl~~~-~~~~~~~~~~  183 (404)
                      ..+..++|. |+++.+|+.|+.+|+++.+.|+...+.. +...+.+....+...+...    .+|+.+. .++++++++.
T Consensus       111 ~~~~~~lG~-gll~~~g~~W~~~Rk~~~~~f~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  111 ESLKPWLGD-GLLFSDGEKWHKHRKLLTPAFHFEILKS-FVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHHHHhcC-ccccCCchHHHHHHhhccHhhhHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence            688899995 8999999999999999999999999998 6666666665555444332    4999999 9999999999


Q ss_pred             HHccCCc-hH---HHHHHHHHHHHHHh---hhccCCc---ccch-hhHHHHHHHHHHHHHHHHHHHHHHhhhhccC----
Q 015580          184 QLMSFDP-NE---WTESLRKEYVLVIE---GFFTVPL---PIFS-TTYRRAIQARTKVAEALSLVVRQRRKESESG----  248 (404)
Q Consensus       184 ~~fG~~~-~~---~~~~~~~~~~~~~~---~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----  248 (404)
                      +++|... +.   ...++.+.+.....   .....|.   ++.. ...++..++++.+.+.++++|+++++.....    
T Consensus       189 ~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~  268 (497)
T KOG0157|consen  189 TAMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGE  268 (497)
T ss_pred             HhcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            9999332 21   23334444443222   2223331   1111 1346677889999999999999988752211    


Q ss_pred             -CccchHHHH-HHcCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChh
Q 015580          249 -ERKNDMLEA-LLAGDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWN  326 (404)
Q Consensus       249 -~~~~~~l~~-l~~~~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~  326 (404)
                       ....++++. +.+.+..++++++.+.+..+++||+|||+++++|+++.|+.||++|+++++|++++++.....  .+..
T Consensus       269 ~~~~~d~L~~~~~~~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~--~~~~  346 (497)
T KOG0157|consen  269 EKKRLDFLDTLLLEEDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK--WEVE  346 (497)
T ss_pred             cchhhhHHHHHHHhccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC--CChh
Confidence             345788884 344456799999999999999999999999999999999999999999999999998732222  3333


Q ss_pred             hhccCccHHHHHHhhhhccCCCccccccccccccc-cCeeeCCCCEEeecchhhhcCCccCC-CCCCCCCCCcCcc
Q 015580          327 DYKSMPFTQCVVNETLRVANIISGVFRRAMTDINI-KGYTIPKGWRVFASFRAVHLDHDHFK-DARSFNPWRWQVN  400 (404)
Q Consensus       327 ~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F~PeRfl~~  400 (404)
                      +.++|+||++||+||||||||+|.+.|.+.+|+.+ +||.||||+.|+++++++|||+++|+ ||++||||||+++
T Consensus       347 ~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~  422 (497)
T KOG0157|consen  347 KLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDG  422 (497)
T ss_pred             hhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCC
Confidence            44479999999999999999999999999999999 58999999999999999999999995 9999999999964


No 22 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=3.2e-58  Score=424.52  Aligned_cols=357  Identities=18%  Similarity=0.257  Sum_probs=274.4

Q ss_pred             CCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccccccCcch-hhh
Q 015580           35 PPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGS-ISN  113 (404)
Q Consensus        35 pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~-~~~  113 (404)
                      ||||+++|++||+..+..    .+++..+.+++++||++|++++++.++|+|+||+++++++.++...|+.+.... ...
T Consensus         1 ppgp~~lP~iG~l~~~~~----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~   76 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE----KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTV   76 (466)
T ss_pred             CcCCCCCCccccHHHcCC----CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHH
Confidence            789999999999988753    358899999999999999999999999999999999999998777776654322 232


Q ss_pred             hhccC-cccccc-chhhHHHHHHhhh-hcChhhhhhhhhHHHHHHHHHHHhccc-------cceehHhhh-hhHHHHHHH
Q 015580          114 LLGKH-SLLLMK-GSLHKRMHSLTMS-FANSSIIRDHLLVDIDRLVRLHMDSWT-------DRVLLMEEA-KKITFELTV  182 (404)
Q Consensus       114 ~~g~~-~~~~~~-~~~~~~~R~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~vdl~~~-~~~~~~~~~  182 (404)
                      +.|.. .++..+ |+.|+++|+.+.+ .++...... +.+.+++.++.+++.+.       ++++|+.+. ..+++++++
T Consensus        77 ~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~  155 (466)
T PLN02655         77 LTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKR-FRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSL  155 (466)
T ss_pred             HhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHH-hHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHH
Confidence            34423 344544 8999999986665 566555554 55555555444444432       127999999 999999999


Q ss_pred             HHHccCCchHHH-----------HHHHHHHHHHHhhhc------cCCc--ccchhhHHH-HHHHHHHHHHHHHHHHHHHh
Q 015580          183 KQLMSFDPNEWT-----------ESLRKEYVLVIEGFF------TVPL--PIFSTTYRR-AIQARTKVAEALSLVVRQRR  242 (404)
Q Consensus       183 ~~~fG~~~~~~~-----------~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~  242 (404)
                      .++||.+.+...           ..+...+..+.....      .+|.  +++...+.+ ..+....+.+.+.+++++++
T Consensus       156 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  235 (466)
T PLN02655        156 IQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQK  235 (466)
T ss_pred             HHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998754311           112222222222211      1221  222222222 22233444567777777666


Q ss_pred             hhhccCCccchHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCC
Q 015580          243 KESESGERKNDMLEALLAGDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEP  322 (404)
Q Consensus       243 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~  322 (404)
                      +....+....|+++.+++....++++++.+.+..+++||+|||+++++|++++|++||++|+++|+|++++.+   . ..
T Consensus       236 ~~~~~~~~~~d~l~~ll~~~~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~---~-~~  311 (466)
T PLN02655        236 KRIARGEERDCYLDFLLSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG---D-ER  311 (466)
T ss_pred             HhhcCCCCcccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC---C-CC
Confidence            5422223356899999988777999999999999999999999999999999999999999999999999986   2 33


Q ss_pred             CChhhhccCccHHHHHHhhhhccCCCcc-ccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCcc
Q 015580          323 LEWNDYKSMPFTQCVVNETLRVANIISG-VFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVN  400 (404)
Q Consensus       323 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  400 (404)
                      ++.+++++||||+|||+||||++|+++. .+|.+.+|++++|+.|||||.|+++.+++||||++|+||++|+||||+++
T Consensus       312 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~  390 (466)
T PLN02655        312 VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGE  390 (466)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCC
Confidence            8999999999999999999999999985 57999999999999999999999999999999999999999999999975


No 23 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=3.5e-57  Score=420.86  Aligned_cols=363  Identities=18%  Similarity=0.203  Sum_probs=274.0

Q ss_pred             cccCCCCCcCCcccchhHHHHHHhhcCCCh-hHHHHHHHhc-cCeeeecccCccEEEecChHHHHHhhhcCCccccccCc
Q 015580           31 RLRLPPGSLGLPFLGETLQLIAAYKTENPE-PFIDVRVKRF-GSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP  108 (404)
Q Consensus        31 ~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~-~~~~~~~~ky-G~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  108 (404)
                      ..++||||+++|++||++.+..    .++. .++.++.++| |+||++++++.++|+++||+.+++++.++...|++++.
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~----~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~  113 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIM----TRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQ  113 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhcc----CCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCC
Confidence            3447999999999999988743    1222 3455666666 79999999999999999999999999988777877654


Q ss_pred             chhhhhhccC--cccccc-chhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhcccc----c-eehHhhh-hhHHHH
Q 015580          109 GSISNLLGKH--SLLLMK-GSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD----R-VLLMEEA-KKITFE  179 (404)
Q Consensus       109 ~~~~~~~g~~--~~~~~~-~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~-~vdl~~~-~~~~~~  179 (404)
                      ......++..  +++..+ |+.|+++|+++.+.|........+.......++++++.+..    + ++|+.+. ..++++
T Consensus       114 ~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  193 (534)
T PLN03018        114 LSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYA  193 (534)
T ss_pred             chhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHH
Confidence            4443334432  466554 99999999999998766555542444444445566655542    2 7999999 999999


Q ss_pred             HHHHHHccCCchH---------H-HHHHHHHHHHHHhhhccCCc---------ccc-h---hhHHHHHHHHHHHHHHHHH
Q 015580          180 LTVKQLMSFDPNE---------W-TESLRKEYVLVIEGFFTVPL---------PIF-S---TTYRRAIQARTKVAEALSL  236 (404)
Q Consensus       180 ~~~~~~fG~~~~~---------~-~~~~~~~~~~~~~~~~~~~~---------~~~-~---~~~~~~~~~~~~~~~~~~~  236 (404)
                      ++++++||.+...         . ...+...+.........+|.         ++. .   ....+.......+.+++.+
T Consensus       194 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  273 (534)
T PLN03018        194 VTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNP  273 (534)
T ss_pred             HHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHH
Confidence            9999999987531         0 11121112222121111111         111 0   1112333345567777888


Q ss_pred             HHHHHhhhh--ccC-CccchHHHHHHcC---CC--CCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHH
Q 015580          237 VVRQRRKES--ESG-ERKNDMLEALLAG---DD--GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKE  308 (404)
Q Consensus       237 ~i~~~~~~~--~~~-~~~~~~l~~l~~~---~~--~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~  308 (404)
                      +++++++..  +.+ ....|+++.+++.   .+  .++++++++.+..+++||+|||+.+++|++++|++||++|+++++
T Consensus       274 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~  353 (534)
T PLN03018        274 IIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALK  353 (534)
T ss_pred             HHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            887775531  111 1246899999864   22  389999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCccc-cccccccccccCeeeCCCCEEeecchhhhcCCccCC
Q 015580          309 EHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGV-FRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFK  387 (404)
Q Consensus       309 Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~  387 (404)
                      |++++++   .++.++.+++.+||||+|||+||+|++|+++.. +|.+.+|++++||.|||||.|+++.+++||||++|+
T Consensus       354 Ei~~v~~---~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~  430 (534)
T PLN03018        354 ELDEVVG---KDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWK  430 (534)
T ss_pred             HHHHHhC---CCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCC
Confidence            9999986   456789999999999999999999999999954 799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcCcc
Q 015580          388 DARSFNPWRWQVN  400 (404)
Q Consensus       388 ~p~~F~PeRfl~~  400 (404)
                      ||++|+||||+++
T Consensus       431 ~p~~F~PeRfl~~  443 (534)
T PLN03018        431 DPLVYEPERHLQG  443 (534)
T ss_pred             CccccCCccCCCC
Confidence            9999999999964


No 24 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.7e-57  Score=385.52  Aligned_cols=359  Identities=24%  Similarity=0.357  Sum_probs=302.4

Q ss_pred             cCCCCCc-CCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCcc--ccccCcc
Q 015580           33 RLPPGSL-GLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKL--FECSYPG  109 (404)
Q Consensus        33 ~~pp~p~-~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~--~~~~~~~  109 (404)
                      ..||.-. ++||+|+...|.+     +|..+++++++|||+||++.++|+.+.++.+|+....++++....  +...+..
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk-----~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~  105 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGK-----DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSK  105 (486)
T ss_pred             CCCcccccCcchhhHHHHhcc-----CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHH
Confidence            4555554 5899999999965     999999999999999999999999999999999999999977433  3333344


Q ss_pred             hhhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhc-cccc--eehHhhh-hhHHHHHHHHHH
Q 015580          110 SISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDS-WTDR--VLLMEEA-KKITFELTVKQL  185 (404)
Q Consensus       110 ~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~--~vdl~~~-~~~~~~~~~~~~  185 (404)
                      ...+.||..-....+......+.+.+...+...++++ +.+.|.+.+++.++. |.+.  +..+... ..+++.+...++
T Consensus       106 l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~-~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~ll  184 (486)
T KOG0684|consen  106 LTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKS-LVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLLL  184 (486)
T ss_pred             hhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHH-HHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHhh
Confidence            5567777444555667788888889999999999999 999999999999988 5544  4455556 778888877777


Q ss_pred             ccCCchHHHHHHHHHHHHHHhhhc----cCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccchHHHHHHc-
Q 015580          186 MSFDPNEWTESLRKEYVLVIEGFF----TVPLPIFSTTYRRAIQARTKVAEALSLVVRQRRKESESGERKNDMLEALLA-  260 (404)
Q Consensus       186 fG~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~l~~-  260 (404)
                      +|......+......+.++..++.    .+|.++|.+..++..++++++.+.+.+.+.++++.  ......|+++.+++ 
T Consensus       185 ~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s--~s~~~~dmlq~l~~~  262 (486)
T KOG0684|consen  185 GGEVRDQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRAS--ISKWDNDMLQSLMEK  262 (486)
T ss_pred             hhhhhhhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhc--cccccHHHHHHHHHH
Confidence            776655534455555555555553    36667777888888899999999999999999988  33456789999988 


Q ss_pred             -C-CCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChhhhccCccHHHHH
Q 015580          261 -G-DDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVV  338 (404)
Q Consensus       261 -~-~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i  338 (404)
                       . +.+.+++|++..++.++|||+.|++.|.+|++++|++|||+++++++|++++++.  ....++.+++++||+|++||
T Consensus       263 y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~--~~~~l~~d~L~~lplL~~~I  340 (486)
T KOG0684|consen  263 YKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE--KKEKLTYDQLKDLPLLDSCI  340 (486)
T ss_pred             hhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc--cCCCCCHHHHhcchHHHHHH
Confidence             3 5578999999999999999999999999999999999999999999999999973  34459999999999999999


Q ss_pred             HhhhhccCCCccccccccccccccC----eeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCccC
Q 015580          339 NETLRVANIISGVFRRAMTDINIKG----YTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQVNL  401 (404)
Q Consensus       339 ~E~lRl~p~~~~~~r~~~~d~~l~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~  401 (404)
                      +|||||+||.+.+.|.+.+|.++.+    |.||+|..|.+++..+|+||++|+||+.|+|+||++++
T Consensus       341 kEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~  407 (486)
T KOG0684|consen  341 KETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDN  407 (486)
T ss_pred             HHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCC
Confidence            9999999999988899999999955    99999999999999999999999999999999999764


No 25 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=6.1e-57  Score=421.68  Aligned_cols=358  Identities=17%  Similarity=0.231  Sum_probs=270.8

Q ss_pred             CCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhc---cCeeeecccCccEEEecChHHHHHhhhcCCccccccCcc--
Q 015580           35 PPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRF---GSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG--  109 (404)
Q Consensus        35 pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~ky---G~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~--  109 (404)
                      +|||+++|++||++.+.+     + +..+.++.++|   |++|++++++.++++++||+.+++|+.++...+......  
T Consensus        32 ~pgp~~~p~~G~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~  105 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK-----N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHS  105 (516)
T ss_pred             cCCCCCCCeecchHHHHh-----c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHH
Confidence            689999999999877654     1 23345555566   899999999999999999999999998654444332211  


Q ss_pred             hhhhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhHHH-HHHHHHHHhccc----cc-eehHhhh-hhHHHHHHH
Q 015580          110 SISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDI-DRLVRLHMDSWT----DR-VLLMEEA-KKITFELTV  182 (404)
Q Consensus       110 ~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~----~~-~vdl~~~-~~~~~~~~~  182 (404)
                      .....+| .+++..+|+.|+++|+++++.|+..++.. +.+.+ .+.++.+.+.+.    .+ ++|+.+. ..+++++++
T Consensus       106 ~~~~~~g-~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~-~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  183 (516)
T PLN03195        106 YMEVLLG-DGIFNVDGELWRKQRKTASFEFASKNLRD-FSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSIC  183 (516)
T ss_pred             HHHHHhc-CeeeccCcHHHHHHHHhcchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHH
Confidence            1223345 67888899999999999999999988887 66655 444555544442    12 7999999 999999999


Q ss_pred             HHHccCCchHH-----HHHHHHHHHHHHhhh---ccCCcc-----cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhcc--
Q 015580          183 KQLMSFDPNEW-----TESLRKEYVLVIEGF---FTVPLP-----IFSTTYRRAIQARTKVAEALSLVVRQRRKESES--  247 (404)
Q Consensus       183 ~~~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--  247 (404)
                      +++||.+.+..     ...+.+.+.......   ...|.+     ++....++..+..+.+.+++.+.++++++....  
T Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  263 (516)
T PLN03195        184 KVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEAR  263 (516)
T ss_pred             HHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99999876431     122333333222111   111211     111112334456677777888888776554111  


Q ss_pred             ---CCccchHHHHHHcC----CCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc---
Q 015580          248 ---GERKNDMLEALLAG----DDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKK---  317 (404)
Q Consensus       248 ---~~~~~~~l~~l~~~----~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~---  317 (404)
                         +....|+++.+++.    ++.++++++.+.+..+++||+|||+++++|++++|++||++|+|+|+|++++.+..   
T Consensus       264 ~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  343 (516)
T PLN03195        264 KSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKE  343 (516)
T ss_pred             cccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccc
Confidence               12356899999864    23589999999999999999999999999999999999999999999999886521   


Q ss_pred             --------------CCCCCCChhhhccCccHHHHHHhhhhccCCCccccccccccccc-cCeeeCCCCEEeecchhhhcC
Q 015580          318 --------------SKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINI-KGYTIPKGWRVFASFRAVHLD  382 (404)
Q Consensus       318 --------------~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~g~~v~~~~~~~~~d  382 (404)
                                    +.++.++.+++++||||+|||+||||++|+++..+|.+.+|.++ +|+.|||||.|+++.+++|||
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        344 EDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             ccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence                          01345899999999999999999999999999888888887776 999999999999999999999


Q ss_pred             CccC-CCCCCCCCCCcCcc
Q 015580          383 HDHF-KDARSFNPWRWQVN  400 (404)
Q Consensus       383 ~~~~-~~p~~F~PeRfl~~  400 (404)
                      |++| +||++|+||||+++
T Consensus       424 p~~~g~dP~~F~PeRwl~~  442 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKD  442 (516)
T ss_pred             hhhhccChhhcCCcccCCC
Confidence            9999 99999999999963


No 26 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=6.5e-57  Score=417.56  Aligned_cols=353  Identities=17%  Similarity=0.226  Sum_probs=269.9

Q ss_pred             CCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeee---ecccCccEEEecChHHHHHhhhcCCccccccCc-chh
Q 015580           36 PGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFT---THIFGEPTVFSADPETNRFILQNEGKLFECSYP-GSI  111 (404)
Q Consensus        36 p~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~---~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-~~~  111 (404)
                      |||.++|++|++..+...  ....++++.+...+||..++   .++++.++++++||+.+++|+.++...|..... ...
T Consensus        34 p~p~~~pl~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         34 PILKNWPFLGMLPGMLHQ--IPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCcccchHHHHHc--cCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            688899999999877642  12345566666566886665   678899999999999999999887666654432 223


Q ss_pred             hhhhccCccccccchhhHHHHHHhhhhcChhhhhhh-hhHHHHHHHHHHHhcccc----c-eehHhhh-hhHHHHHHHHH
Q 015580          112 SNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDH-LLVDIDRLVRLHMDSWTD----R-VLLMEEA-KKITFELTVKQ  184 (404)
Q Consensus       112 ~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~----~-~vdl~~~-~~~~~~~~~~~  184 (404)
                      ...+| .+++..+|+.|+++|+++.+.|+..++... ....+.+.++.+++.+..    + ++|+.+. .++++++++++
T Consensus       112 ~~~~g-~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  190 (500)
T PLN02169        112 FDVLG-EGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSIL  190 (500)
T ss_pred             HHhhc-CcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhh
Confidence            34455 789999999999999999999998876541 124444555555544432    2 7999999 99999999999


Q ss_pred             HccCCchHH-----HHHHHHHHHHHHhh---hccCCc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhc-c-
Q 015580          185 LMSFDPNEW-----TESLRKEYVLVIEG---FFTVPL-------PIFSTTYRRAIQARTKVAEALSLVVRQRRKESE-S-  247 (404)
Q Consensus       185 ~fG~~~~~~-----~~~~~~~~~~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-  247 (404)
                      +||.+.+..     ..++.+.+......   ....|+       +++....++..++.+.+.+.+.++|+++++... . 
T Consensus       191 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~  270 (500)
T PLN02169        191 MTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRA  270 (500)
T ss_pred             eeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            999875421     12333333222111   111221       112223455677888899999999988876411 1 


Q ss_pred             --CCccchHHHHHHcCC-------CCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcC
Q 015580          248 --GERKNDMLEALLAGD-------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKS  318 (404)
Q Consensus       248 --~~~~~~~l~~l~~~~-------~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~  318 (404)
                        +....|+++.+++..       ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++++    
T Consensus       271 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~----  346 (500)
T PLN02169        271 ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF----  346 (500)
T ss_pred             cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC----
Confidence              112368999888642       1368889999999999999999999999999999999999999999998763    


Q ss_pred             CCCCCChhhhccCccHHHHHHhhhhccCCCccccccccccccc-cCeeeCCCCEEeecchhhhcCCccC-CCCCCCCCCC
Q 015580          319 KQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINI-KGYTIPKGWRVFASFRAVHLDHDHF-KDARSFNPWR  396 (404)
Q Consensus       319 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~PeR  396 (404)
                           +.+++++||||+|||+||||++|+++...|.+.+|.++ +|+.|||||.|.++.+++||||++| +||++|+|||
T Consensus       347 -----~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeR  421 (500)
T PLN02169        347 -----DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPER  421 (500)
T ss_pred             -----CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccc
Confidence                 47899999999999999999999999888888877665 9999999999999999999999999 8999999999


Q ss_pred             cCcc
Q 015580          397 WQVN  400 (404)
Q Consensus       397 fl~~  400 (404)
                      |+++
T Consensus       422 fl~~  425 (500)
T PLN02169        422 WISD  425 (500)
T ss_pred             cCCC
Confidence            9964


No 27 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.1e-57  Score=426.74  Aligned_cols=339  Identities=21%  Similarity=0.329  Sum_probs=268.5

Q ss_pred             cCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccccccCcchhhhhhccCccccccchhhHHHHHHh
Q 015580           56 TENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLT  135 (404)
Q Consensus        56 ~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~  135 (404)
                      +++++..+.++++||||||++++++.++++++||+.+++|+..+...+.............+.+++..+|+.|+.+|+.+
T Consensus       150 ~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l  229 (633)
T PLN02738        150 GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAI  229 (633)
T ss_pred             CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhc
Confidence            46788999999999999999999888999999999999999877665654432222222233678888999999999999


Q ss_pred             hhhcChhhhhhhhhHHHHHHHHHHHhcccc----c-eehHhhh-hhHHHHHHHHHHccCCchH--HHHHHHHHHHHHHhh
Q 015580          136 MSFANSSIIRDHLLVDIDRLVRLHMDSWTD----R-VLLMEEA-KKITFELTVKQLMSFDPNE--WTESLRKEYVLVIEG  207 (404)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~-~vdl~~~-~~~~~~~~~~~~fG~~~~~--~~~~~~~~~~~~~~~  207 (404)
                      ++.|+...+.. +.+.+.+.++++++++.+    + ++|+.+. ..++++++++++||.+.+.  ..+.+.+.+......
T Consensus       230 ~p~Fs~~~v~~-l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~  308 (633)
T PLN02738        230 VPALHQKYVAA-MISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLRE  308 (633)
T ss_pred             cHhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHH
Confidence            99999998887 899999999999888853    2 8999999 9999999999999987653  111222222222211


Q ss_pred             -----hccCC-cccch-----hhHHHHHHHHHHHHHHHHHHHHHHhhh---h------c-cCCccchHHHHHHcCCCCCC
Q 015580          208 -----FFTVP-LPIFS-----TTYRRAIQARTKVAEALSLVVRQRRKE---S------E-SGERKNDMLEALLAGDDGFS  266 (404)
Q Consensus       208 -----~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~---~------~-~~~~~~~~l~~l~~~~~~~~  266 (404)
                           ...++ +.+|.     +..++..+..+.+...+.++++.++..   .      + ......++++.+++.+..++
T Consensus       309 ~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~~~ls  388 (633)
T PLN02738        309 AEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASGDDVS  388 (633)
T ss_pred             HHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcCCCCC
Confidence                 11111 11111     112333344445555555555433221   0      0 01234689999998776799


Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccC
Q 015580          267 DEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVAN  346 (404)
Q Consensus       267 ~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p  346 (404)
                      ++++.+.+..+++||+|||+.+++|++++|++||++|+|+|+|++++.+    ++.++++++++||||+|||+|+||++|
T Consensus       389 ~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~----~~~~t~edL~kLPYL~AVIkEtLRL~p  464 (633)
T PLN02738        389 SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG----DRFPTIEDMKKLKYTTRVINESLRLYP  464 (633)
T ss_pred             HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC----CCCCCHHHHccCHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999999999999976    356899999999999999999999999


Q ss_pred             CCccccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCcCc
Q 015580          347 IISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQV  399 (404)
Q Consensus       347 ~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~  399 (404)
                      +++..+|++.+|++++||.|||||.|+++.+.+||||++|+||++|+||||++
T Consensus       465 ~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~  517 (633)
T PLN02738        465 QPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPL  517 (633)
T ss_pred             CccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCC
Confidence            99988899999999999999999999999999999999999999999999984


No 28 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3e-56  Score=387.31  Aligned_cols=365  Identities=21%  Similarity=0.283  Sum_probs=294.0

Q ss_pred             cccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeec-ccCccEEEecChHHHHHhhhcCCcc-ccc-c-
Q 015580           31 RLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTH-IFGEPTVFSADPETNRFILQNEGKL-FEC-S-  106 (404)
Q Consensus        31 ~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~-l~~~~~vvv~~p~~~~~i~~~~~~~-~~~-~-  106 (404)
                      +....|||..+|++|.+..+.. ....+.|+....+++|||+||+.. +|+.+.|.+.||++++.++..++.. +.. . 
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~-~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRA-GGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHh-hhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCccccc
Confidence            3445689999999998776433 334588999999999999999999 7888999999999999999987754 321 1 


Q ss_pred             Ccch-hhhhhc-cCccccccchhhHHHHHHhhhhc-ChhhhhhhhhHHHHHHHHHHHhccccc--------eehHhhh-h
Q 015580          107 YPGS-ISNLLG-KHSLLLMKGSLHKRMHSLTMSFA-NSSIIRDHLLVDIDRLVRLHMDSWTDR--------VLLMEEA-K  174 (404)
Q Consensus       107 ~~~~-~~~~~g-~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~vdl~~~-~  174 (404)
                      .+.. -...++ ..|++..+|+.|++.|..+++.+ .++.... +.+.+++..++++..+...        +.|+.+. .
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~-yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~  205 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRR-YLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELY  205 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHH-HhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence            1111 133333 57899999999999999999865 4555555 8888888888888776432        7899999 9


Q ss_pred             hHHHHHHHHHHccCCchH-------HHHHHHHHHHHHHhhh----ccCCc--ccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 015580          175 KITFELTVKQLMSFDPNE-------WTESLRKEYVLVIEGF----FTVPL--PIFSTTYRRAIQARTKVAEALSLVVRQR  241 (404)
Q Consensus       175 ~~~~~~~~~~~fG~~~~~-------~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (404)
                      +++++.++.++||.+.+.       +...+.+.+..+....    ...++  +++.+.|++..++.+.+.+...++|+..
T Consensus       206 ~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~  285 (519)
T KOG0159|consen  206 RWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNA  285 (519)
T ss_pred             HHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999977543       3444444444443322    22222  4567789999999999999999988887


Q ss_pred             hhhhccCC----c-cchHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Q 015580          242 RKESESGE----R-KNDMLEALLAGDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAK  316 (404)
Q Consensus       242 ~~~~~~~~----~-~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~  316 (404)
                      .+..+...    + ...++..+.++  .++.+++...+++++.||.|||++++.|+||+|++||++|++|++|+.++...
T Consensus       286 l~~l~~~~~~~~~~~~~l~~~L~~~--~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~  363 (519)
T KOG0159|consen  286 LEELEKQDSAGSEYTGSLLELLLRK--ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPS  363 (519)
T ss_pred             HHHHHhccccccchhHHHHHHHHHc--cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCC
Confidence            66522111    1 22344444443  37999999999999999999999999999999999999999999999998762


Q ss_pred             cCCCCCCChhhhccCccHHHHHHhhhhccCCCccccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCC
Q 015580          317 KSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWR  396 (404)
Q Consensus       317 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeR  396 (404)
                        ++..++.+++.+||||+||||||+||||.+++..|...+|.+++||.|||||.|.+..+.+.+||++|++|++|+|||
T Consensus       364 --~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeR  441 (519)
T KOG0159|consen  364 --GNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPER  441 (519)
T ss_pred             --cccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhh
Confidence              368899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccC
Q 015580          397 WQVNL  401 (404)
Q Consensus       397 fl~~~  401 (404)
                      ||++.
T Consensus       442 WL~~~  446 (519)
T KOG0159|consen  442 WLKPS  446 (519)
T ss_pred             hcccc
Confidence            99876


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=6.1e-56  Score=411.12  Aligned_cols=364  Identities=18%  Similarity=0.261  Sum_probs=288.6

Q ss_pred             cccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCCccccccCcch
Q 015580           31 RLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGS  110 (404)
Q Consensus        31 ~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~  110 (404)
                      .+++-.|-.|||++|..+.+.....++.++..+.+++++||++|++++++.++++++||+++++|+.+....|.......
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~   89 (489)
T PLN02936         10 LNRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE   89 (489)
T ss_pred             hhccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhh
Confidence            45566888999999999999988888899999999999999999999999999999999999999987655565443322


Q ss_pred             h-hhhhccCccccccchhhHHHHHHhhhhcChhhhhhhhhH-HHHHHHHHHHhcccc----c-eehHhhh-hhHHHHHHH
Q 015580          111 I-SNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLV-DIDRLVRLHMDSWTD----R-VLLMEEA-KKITFELTV  182 (404)
Q Consensus       111 ~-~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~----~-~vdl~~~-~~~~~~~~~  182 (404)
                      . ...+| .+++..+|+.|+++|+.+++.|+..++.+ +.+ .+.+.++++++.+..    + ++|+.+. +.+++++++
T Consensus        90 ~~~~~~~-~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~-~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~  167 (489)
T PLN02936         90 VSEFLFG-SGFAIAEGELWTARRRAVVPSLHRRYLSV-MVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG  167 (489)
T ss_pred             hhHHHhc-CccccCCchHHHHHHHhhcCccCHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence            2 22345 67888999999999999999999888776 433 566677777766532    2 8999999 999999999


Q ss_pred             HHHccCCchHH--HHHHHHHHHHHHhh-----hccCCccc-c-----hhhHHHHHHHHHHHHHHHHHHHHHHhhhhc--c
Q 015580          183 KQLMSFDPNEW--TESLRKEYVLVIEG-----FFTVPLPI-F-----STTYRRAIQARTKVAEALSLVVRQRRKESE--S  247 (404)
Q Consensus       183 ~~~fG~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~  247 (404)
                      .++||.+.+..  ..++.+.+......     ...+|.+. +     .+..++..++.+.+.+.+.+.++++++..+  .
T Consensus       168 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~  247 (489)
T PLN02936        168 LSVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEG  247 (489)
T ss_pred             HHHcCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99999887531  11222222221111     11122110 0     112345666777778888888876654210  0


Q ss_pred             ---------CCccchHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcC
Q 015580          248 ---------GERKNDMLEALLAGDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKS  318 (404)
Q Consensus       248 ---------~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~  318 (404)
                               .+...++++.+++..+.++++++.+.+..+++||+|||+++++|++++|++||++|+++|+|++++++   
T Consensus       248 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~---  324 (489)
T PLN02936        248 EVIEGEEYVNDSDPSVLRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQ---  324 (489)
T ss_pred             cccccccccccCchHHHHHHHhccccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc---
Confidence                     12346899999987667899999999999999999999999999999999999999999999999876   


Q ss_pred             CCCCCChhhhccCccHHHHHHhhhhccCCCcc-ccccccccccccCeeeCCCCEEeecchhhhcCCccCCCCCCCCCCCc
Q 015580          319 KQEPLEWNDYKSMPFTQCVVNETLRVANIISG-VFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW  397 (404)
Q Consensus       319 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRf  397 (404)
                       ++.++++++++||||+|||+||+|++|+++. .+|.+.+|+.++|+.||||++|+++.+++||||++|+||++|+||||
T Consensus       325 -~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRw  403 (489)
T PLN02936        325 -GRPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERF  403 (489)
T ss_pred             -CCCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcccc
Confidence             2457899999999999999999999999984 44555677778999999999999999999999999999999999999


Q ss_pred             Ccc
Q 015580          398 QVN  400 (404)
Q Consensus       398 l~~  400 (404)
                      +++
T Consensus       404 l~~  406 (489)
T PLN02936        404 DLD  406 (489)
T ss_pred             CCC
Confidence            964


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=7e-53  Score=390.04  Aligned_cols=345  Identities=20%  Similarity=0.277  Sum_probs=268.4

Q ss_pred             CcccchhHHHHHHhhcCCChhHHHHHHHhcc-CeeeecccCccEEEecChHHHHHhhhcCCccccccCc--chhhhhhcc
Q 015580           41 LPFLGETLQLIAAYKTENPEPFIDVRVKRFG-SIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP--GSISNLLGK  117 (404)
Q Consensus        41 ~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~--~~~~~~~g~  117 (404)
                      .++.|+....+.     +..+++..+.++++ .+++++.+|.  ++++||+.+++++..+...|.....  ......+| 
T Consensus        49 ~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g-  120 (502)
T PLN02426         49 AYLTASWAKDFD-----NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG-  120 (502)
T ss_pred             CCccHHHHHhcc-----cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC-
Confidence            446788766433     45777777777876 6788877665  8999999999999877655543322  22334566 


Q ss_pred             CccccccchhhHHHHHHhhhhcChhhhhhhhh--HHHHHHHHHHHhcccc-------ceehHhhh-hhHHHHHHHHHHcc
Q 015580          118 HSLLLMKGSLHKRMHSLTMSFANSSIIRDHLL--VDIDRLVRLHMDSWTD-------RVLLMEEA-KKITFELTVKQLMS  187 (404)
Q Consensus       118 ~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~-------~~vdl~~~-~~~~~~~~~~~~fG  187 (404)
                      .+++..+|+.|+++|+.+.+.|+.+.+.. +.  ..+.+.++.+++.+..       .++|+.++ ..+++++++++.||
T Consensus       121 ~gi~~~~g~~wk~~Rk~l~~~fs~~~l~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  199 (502)
T PLN02426        121 RGIFNVDGDSWRFQRKMASLELGSVSIRS-YAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFG  199 (502)
T ss_pred             CceeecCcHHHHHHHHHhHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999988876 32  4455555555544421       26999999 99999999999999


Q ss_pred             CCchH-----HHHHHHHHHHHHHhh-----hccCCc------ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCcc
Q 015580          188 FDPNE-----WTESLRKEYVLVIEG-----FFTVPL------PIFSTTYRRAIQARTKVAEALSLVVRQRRKESESGERK  251 (404)
Q Consensus       188 ~~~~~-----~~~~~~~~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  251 (404)
                      .+.+.     ...++.+.+..+...     ...+|+      +++.+..++..++.+.+.+.+.++++++++.  .....
T Consensus       200 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~--~~~~~  277 (502)
T PLN02426        200 LDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKL--GFSAS  277 (502)
T ss_pred             CCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhc--ccCCc
Confidence            87642     122344433332211     111121      1122233566777888999999999888765  22235


Q ss_pred             chHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChhhhccC
Q 015580          252 NDMLEALLAGDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSM  331 (404)
Q Consensus       252 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~l  331 (404)
                      .|+++.+++...  +++++.+.+..+++||+|||+++++|++++|++||++|+|+|+|++++.+.  ....++++++++|
T Consensus       278 ~dll~~ll~~~~--~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~--~~~~~t~~~l~~L  353 (502)
T PLN02426        278 KDLLSRFMASIN--DDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP--NQEAASFEEMKEM  353 (502)
T ss_pred             chHHHHHHhcCC--CHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC--CCCCCCHHHHhcC
Confidence            799999997653  788999999999999999999999999999999999999999999998752  2346899999999


Q ss_pred             ccHHHHHHhhhhccCCCccccccccccccc-cCeeeCCCCEEeecchhhhcCCccC-CCCCCCCCCCcCcc
Q 015580          332 PFTQCVVNETLRVANIISGVFRRAMTDINI-KGYTIPKGWRVFASFRAVHLDHDHF-KDARSFNPWRWQVN  400 (404)
Q Consensus       332 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~  400 (404)
                      |||+|||+|+||++|+++...|.+.+|.++ +|+.|||||.|.++.+++||||++| +||++|+||||+++
T Consensus       354 pYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~  424 (502)
T PLN02426        354 HYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKN  424 (502)
T ss_pred             hHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCC
Confidence            999999999999999999777999999888 9999999999999999999999999 99999999999974


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.4e-54  Score=392.74  Aligned_cols=348  Identities=21%  Similarity=0.316  Sum_probs=268.9

Q ss_pred             ccccCCCCCcCCcccchhHHHHHHhhcCCChhHHHHHHHhccC-eeeecccCccE-------EEecChHHHHHhhhc---
Q 015580           30 RRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGS-IFTTHIFGEPT-------VFSADPETNRFILQN---   98 (404)
Q Consensus        30 ~~~~~pp~p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~kyG~-v~~~~l~~~~~-------vvv~~p~~~~~i~~~---   98 (404)
                      .+.+.|||+.++|++|+..++.+.....++..++.+.++|||+ ||+++++|.++       |+++||+.++.+++.   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            4556799999999999999888766667889999999999998 99999999665       999999999999985   


Q ss_pred             -CCccccccCcchhhhhhccC---ccccccchhhHHHHHHhhhhcChhhhhhhhhHHHHHHHHHHHhcccc----c-eeh
Q 015580           99 -EGKLFECSYPGSISNLLGKH---SLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD----R-VLL  169 (404)
Q Consensus        99 -~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~-~vd  169 (404)
                       +...+...++.... ++|.+   +++..+|+.|+++|+++.+.|+ ..+.. +.+.|.+.+++++++|..    + ++|
T Consensus        94 ~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~-~~~~m~~~~~~~~~~w~~~~~~~~~vd  170 (480)
T PLN02648         94 DKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRR-FIPEFRAAFAELFDTWEAELAKKGKAE  170 (480)
T ss_pred             cccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhh-hhhHHHHHHHHHHHHHHHHHhhCCCcc
Confidence             44445555665555 88866   7888899999999999999998 56776 999999999999999953    1 799


Q ss_pred             Hhhh-hhHHHHHHHHHHccCCchHHHHHHHHHHHHHHhhhcc---CCc---ccchhhHHHH------------HHHHHHH
Q 015580          170 MEEA-KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFT---VPL---PIFSTTYRRA------------IQARTKV  230 (404)
Q Consensus       170 l~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~------------~~~~~~~  230 (404)
                      +.+. ..++++++++++||.+.+.  ..+.+.+..+...+..   +|.   .++. ..++.            .+..+++
T Consensus       171 v~~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~~~p~~~~~l~~-~~~~~i~~~~~~~~~~~~~~~~~~  247 (480)
T PLN02648        171 FNDPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQLAPLASTGLPH-VLEELLLHTFPLPFFLVKSDYDKL  247 (480)
T ss_pred             ccchHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHHhhHHHHcCchH-HHHHHhhcccCCchhhhhccHHHH
Confidence            9999 9999999999999987664  2233333333222211   111   0000 00000            0011111


Q ss_pred             HHHHHHHHHHHhhhhccCCccchHHHHHHcCCCCCCHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHhcCHH-HHHHHHH
Q 015580          231 AEALSLVVRQRRKESESGERKNDMLEALLAGDDGFSDEEIVDFLVA-LLVAGYETTSTIMTLAVKFLTETPL-ALAQLKE  308 (404)
Q Consensus       231 ~~~~~~~i~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~-~~~ag~~tt~~~l~~~l~~l~~~p~-~~~~lr~  308 (404)
                      .+.+.+.+             .++++...+  .+++++++.++++. +.+++++|++.+++|++++|++||+ +|+++|+
T Consensus       248 ~~~~~~~~-------------~~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~  312 (480)
T PLN02648        248 YDFFRASA-------------TEALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAE  312 (480)
T ss_pred             HHHHHHHH-------------HHHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence            11111111             122222222  34899999998875 4466777778899999999999995 9999999


Q ss_pred             HHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCcccccccccccccc----CeeeCCCCEEeecchhhhcCCc
Q 015580          309 EHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIK----GYTIPKGWRVFASFRAVHLDHD  384 (404)
Q Consensus       309 Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~----g~~ip~g~~v~~~~~~~~~d~~  384 (404)
                      |++++.+.  .++.++.+++++||||++||+|++|++|+++...|++.+|++++    ||.||||+.|+++.+.+||||+
T Consensus       313 Ei~~~~~~--~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~  390 (480)
T PLN02648        313 EVRSAVKA--GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPK  390 (480)
T ss_pred             HHHHHhcc--CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcc
Confidence            99998752  24568999999999999999999999999998889999999995    7999999999999999999999


Q ss_pred             cCCCCCCCCCCCcCcc
Q 015580          385 HFKDARSFNPWRWQVN  400 (404)
Q Consensus       385 ~~~~p~~F~PeRfl~~  400 (404)
                      +|+||++|+|+||+++
T Consensus       391 ~~~dP~~F~PeRf~~~  406 (480)
T PLN02648        391 VFDRPEEFVPDRFMGE  406 (480)
T ss_pred             cCCCcceeCCCCCCCC
Confidence            9999999999999964


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.7e-44  Score=325.49  Aligned_cols=310  Identities=27%  Similarity=0.384  Sum_probs=256.3

Q ss_pred             ChhHHHHHHHhccCeeeecccCcc--EEEecChHHHHHhhhcCCccccccCc----c-hhhhhhccCccccccchhhHHH
Q 015580           59 PEPFIDVRVKRFGSIFTTHIFGEP--TVFSADPETNRFILQNEGKLFECSYP----G-SISNLLGKHSLLLMKGSLHKRM  131 (404)
Q Consensus        59 ~~~~~~~~~~kyG~v~~~~l~~~~--~vvv~~p~~~~~i~~~~~~~~~~~~~----~-~~~~~~g~~~~~~~~~~~~~~~  131 (404)
                      +......+.+.||.+++++..++.  .+++++++.++++++++. .+++...    . .....+|...++..||+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            345566677788888888876665  899999999999999774 1211111    1 1345666555889999999999


Q ss_pred             HHHhhhhcChhhhhhhhhHHHHHHHHHHHhccccc-eehHhhh-hhHHHHHHHHHHccCCchHHHHHHHHHHHHHHhhhc
Q 015580          132 HSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFF  209 (404)
Q Consensus       132 R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~vdl~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~  209 (404)
                      |+++++.|+++.+.+ +.+.+.+.++++++.+... ..++.+. ..+++.+++ .+||.+..+.... ........... 
T Consensus       103 Rkl~~~~F~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~-~~~~~~~~~~~-  178 (411)
T COG2124         103 RKLLAPAFTPRALRG-YRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQL-LRWSDALLLRL-  178 (411)
T ss_pred             HHHhccccCHHHHHH-HHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHH-HHHHHHHHhcc-
Confidence            999999999999999 9999999999999998222 6677777 999999999 8999998853222 22222222221 


Q ss_pred             cCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccchHHHHHHcC---CC-CCCHHHHHHHHHHHHHHHHHhh
Q 015580          210 TVPLPIFSTTYRRAIQARTKVAEALSLVVRQRRKESESGERKNDMLEALLAG---DD-GFSDEEIVDFLVALLVAGYETT  285 (404)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~l~~~---~~-~~~~~~~~~~~~~~~~ag~~tt  285 (404)
                       .+...+...+.+..++..++.+++.++|++++.     +..+|+++.++..   ++ .++++|+.++++.+++||+|||
T Consensus       179 -~~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~-----~~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTT  252 (411)
T COG2124         179 -DPDLGPEEPWRRARAARRELDAYLRALIAERRA-----APRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETT  252 (411)
T ss_pred             -CcccCCcccHHHHHHHHHHHHHHHHHHHHHhcc-----CCcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHH
Confidence             133344445778889999999999999999983     3478899999854   33 4999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCccccccccccccccCee
Q 015580          286 STIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYT  365 (404)
Q Consensus       286 ~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~  365 (404)
                      +++++|+++.|++||+.++++++|.+.                   ||+.++++|+||++||++...|.+.+|++++|+.
T Consensus       253 a~~l~~a~~~L~~~P~~~~~l~~e~~~-------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~  313 (411)
T COG2124         253 ANALAWALYALLRHPDQLAKLRAEPDR-------------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYR  313 (411)
T ss_pred             HHHHHHHHHHHHHCchHHHHHHhCcch-------------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEE
Confidence            999999999999999999999999753                   7889999999999999999889999999999999


Q ss_pred             eCCCCEEeecchhhhcCCccCCCCCCCCCCCcC
Q 015580          366 IPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQ  398 (404)
Q Consensus       366 ip~g~~v~~~~~~~~~d~~~~~~p~~F~PeRfl  398 (404)
                      ||||+.|+++.+++||||++|+||++|+|+||.
T Consensus       314 Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~  346 (411)
T COG2124         314 IPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN  346 (411)
T ss_pred             eCCCCEEEecHhhhcCChhhCCChhhcCCCCCC
Confidence            999999999999999999999999999999997


No 33 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=84.22  E-value=1.1  Score=33.54  Aligned_cols=27  Identities=22%  Similarity=0.368  Sum_probs=12.2

Q ss_pred             hHhHHHHHHHHHHHHHHHHHHhhccCc
Q 015580            4 LTLVYDLVLYISISTVIFFIIKRSRSR   30 (404)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~   30 (404)
                      |+++.++|+++++++++++++.+++++
T Consensus         2 W~l~~iii~~i~l~~~~~~~~~rRR~r   28 (130)
T PF12273_consen    2 WVLFAIIIVAILLFLFLFYCHNRRRRR   28 (130)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            344544454444444444444333333


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=69.14  E-value=3.7  Score=25.50  Aligned_cols=8  Identities=38%  Similarity=0.908  Sum_probs=6.4

Q ss_pred             CCCCcCcc
Q 015580          393 NPWRWQVN  400 (404)
Q Consensus       393 ~PeRfl~~  400 (404)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            88999863


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=68.20  E-value=1.5  Score=35.19  Aligned_cols=44  Identities=34%  Similarity=0.403  Sum_probs=32.6

Q ss_pred             cCccHHHHHHhhhhccCCCccccccccccccccCeeeCCCCEEee
Q 015580          330 SMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFA  374 (404)
Q Consensus       330 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~  374 (404)
                      .-....|||.|+.-... ...+.=+-.+|+.++|..|||||.+.-
T Consensus        51 ~~n~I~A~V~~~qtv~~-Gs~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVD-GSRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeC-CCEEEEEEcCceEECCEEeCCCCEEEE
Confidence            45567789999987753 333433345899999999999998775


No 36 
>PHA03049 IMV membrane protein; Provisional
Probab=62.88  E-value=19  Score=22.65  Aligned_cols=24  Identities=17%  Similarity=-0.016  Sum_probs=11.9

Q ss_pred             CcchHhHHHHHHHHHHHHHHHHHH
Q 015580            1 MAGLTLVYDLVLYISISTVIFFII   24 (404)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~   24 (404)
                      |-+..++.++.++++++++..++.
T Consensus         1 MI~d~~l~iICVaIi~lIvYgiYn   24 (68)
T PHA03049          1 MIGDIILVIICVVIIGLIVYGIYN   24 (68)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHh
Confidence            444445545555555555554443


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=61.87  E-value=9.8  Score=23.41  Aligned_cols=21  Identities=33%  Similarity=0.520  Sum_probs=17.2

Q ss_pred             HHHHHHHhcCHHHHHHHHHHH
Q 015580          290 TLAVKFLTETPLALAQLKEEH  310 (404)
Q Consensus       290 ~~~l~~l~~~p~~~~~lr~Ei  310 (404)
                      .-++.+|.+||++.+++.+.=
T Consensus         3 Q~iV~YLv~nPevl~kl~~g~   23 (57)
T PF05952_consen    3 QEIVNYLVQNPEVLEKLKEGE   23 (57)
T ss_pred             HHHHHHHHHChHHHHHHHcCC
Confidence            346789999999999998753


No 38 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=60.41  E-value=9.8  Score=27.86  Aligned_cols=8  Identities=38%  Similarity=0.634  Sum_probs=3.0

Q ss_pred             HHHHhhcc
Q 015580           21 FFIIKRSR   28 (404)
Q Consensus        21 ~~~~~~~~   28 (404)
                      +|+++|+.
T Consensus        85 ~y~irR~~   92 (122)
T PF01102_consen   85 SYCIRRLR   92 (122)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHHh
Confidence            33333333


No 39 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=51.67  E-value=40  Score=21.47  Aligned_cols=25  Identities=12%  Similarity=-0.031  Sum_probs=12.9

Q ss_pred             CcchHhHHHHHHHHHHHHHHHHHHh
Q 015580            1 MAGLTLVYDLVLYISISTVIFFIIK   25 (404)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~   25 (404)
                      |-+..++..+.++++++++..++.+
T Consensus         1 MI~d~iLi~ICVaii~lIlY~iYnr   25 (68)
T PF05961_consen    1 MIGDFILIIICVAIIGLILYGIYNR   25 (68)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4444555555555555555555533


No 40 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=49.33  E-value=33  Score=24.56  Aligned_cols=10  Identities=20%  Similarity=0.159  Sum_probs=6.4

Q ss_pred             CCcccchhHH
Q 015580           40 GLPFLGETLQ   49 (404)
Q Consensus        40 ~~P~~G~~~~   49 (404)
                      .-|+-||+..
T Consensus        45 ~~p~YgNL~~   54 (107)
T PF15330_consen   45 DDPCYGNLEL   54 (107)
T ss_pred             CCcccccccc
Confidence            4677787544


No 41 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=47.72  E-value=59  Score=19.30  Aligned_cols=42  Identities=19%  Similarity=0.238  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCHHHHHHHHHHH
Q 015580          269 EIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEH  310 (404)
Q Consensus       269 ~~~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei  310 (404)
                      ++...+..++-.|.|-.+..+.--+.+.--||+...++-+|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566667777888877888888888888999998887775


No 42 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=45.26  E-value=5.6  Score=35.92  Aligned_cols=45  Identities=27%  Similarity=0.303  Sum_probs=33.3

Q ss_pred             cCccHHHHHHhhhhccCCCccccccccccccccCeeeCCCCEEeec
Q 015580          330 SMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFAS  375 (404)
Q Consensus       330 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~g~~v~~~  375 (404)
                      .-..+.|||.|+.-+.- ...+.=+-.+|+.++|..|||||.|...
T Consensus       254 ~~n~I~A~V~~~qtv~~-G~~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVD-GSAVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEec-CCEEEEEEcCceeeCCEEecCCCEEEEE
Confidence            45567789999988863 3344334458999999999999987654


No 43 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=41.04  E-value=30  Score=21.01  Aligned_cols=17  Identities=12%  Similarity=0.194  Sum_probs=15.5

Q ss_pred             ccCeeeecccCccEEEe
Q 015580           70 FGSIFTTHIFGEPTVFS   86 (404)
Q Consensus        70 yG~v~~~~l~~~~~vvv   86 (404)
                      -|++++++-||+.|+|.
T Consensus         3 ~GDvV~LKSGGp~MTV~   19 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVT   19 (53)
T ss_pred             CCCEEEEccCCCCeEEE
Confidence            48999999999999887


No 44 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=37.93  E-value=1.1e+02  Score=28.48  Aligned_cols=35  Identities=23%  Similarity=0.467  Sum_probs=19.3

Q ss_pred             hccCeeeecccCccEEEecChHHHHHhhhcCCccc
Q 015580           69 RFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLF  103 (404)
Q Consensus        69 kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~~~~  103 (404)
                      +||.|++-.+-++.+-|=.=|..-++=+.+....|
T Consensus       222 rfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy  256 (534)
T KOG3653|consen  222 RFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIY  256 (534)
T ss_pred             ccceeehhhccCceeEEEecCHHHHHHHHhHHHHH
Confidence            68899998776665544333333333333344444


No 45 
>PRK06789 flagellar motor switch protein; Validated
Probab=35.83  E-value=38  Score=22.27  Aligned_cols=38  Identities=8%  Similarity=0.086  Sum_probs=30.2

Q ss_pred             HHhhhhccCCCc-ccccccccc--ccccCeeeCCCCEEeec
Q 015580          338 VNETLRVANIIS-GVFRRAMTD--INIKGYTIPKGWRVFAS  375 (404)
Q Consensus       338 i~E~lRl~p~~~-~~~r~~~~d--~~l~g~~ip~g~~v~~~  375 (404)
                      ++|-+.+.+.+. .+-|.+-++  +.++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            789999988766 566777664  55699999999988875


No 46 
>PRK01844 hypothetical protein; Provisional
Probab=35.77  E-value=42  Score=21.79  Aligned_cols=17  Identities=24%  Similarity=0.282  Sum_probs=6.6

Q ss_pred             HHHHHhhccCccccCCC
Q 015580           20 IFFIIKRSRSRRLRLPP   36 (404)
Q Consensus        20 ~~~~~~~~~~~~~~~pp   36 (404)
                      +++..+...+.....||
T Consensus        22 ff~ark~~~k~lk~NPp   38 (72)
T PRK01844         22 FFIARKYMMNYLQKNPP   38 (72)
T ss_pred             HHHHHHHHHHHHHHCCC
Confidence            33333333334444444


No 47 
>PRK00523 hypothetical protein; Provisional
Probab=32.61  E-value=52  Score=21.40  Aligned_cols=7  Identities=29%  Similarity=0.453  Sum_probs=2.8

Q ss_pred             ccccCCC
Q 015580           30 RRLRLPP   36 (404)
Q Consensus        30 ~~~~~pp   36 (404)
                      .....||
T Consensus        33 ~l~~NPp   39 (72)
T PRK00523         33 QIRENPP   39 (72)
T ss_pred             HHHHCcC
Confidence            3343444


No 48 
>PF14991 MLANA:  Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P.
Probab=32.55  E-value=15  Score=26.16  Aligned_cols=25  Identities=20%  Similarity=0.234  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCccc
Q 015580            8 YDLVLYISISTVIFFIIKRSRSRRL   32 (404)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~   32 (404)
                      .++++.+++++.+|++.+|+.++..
T Consensus        32 L~VILgiLLliGCWYckRRSGYk~L   56 (118)
T PF14991_consen   32 LIVILGILLLIGCWYCKRRSGYKTL   56 (118)
T ss_dssp             -------------------------
T ss_pred             HHHHHHHHHHHhheeeeecchhhhh
Confidence            3455556666777777777777644


No 49 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=31.62  E-value=67  Score=23.82  Aligned_cols=40  Identities=23%  Similarity=0.269  Sum_probs=30.5

Q ss_pred             ChhHHHHHHHhccCeeeecccCccEEEecChHHHHHhhhcCC
Q 015580           59 PEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEG  100 (404)
Q Consensus        59 ~~~~~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~~~  100 (404)
                      ....+.+|.++||.+--..  +...+...|++.++++.+.+.
T Consensus        76 v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhChh
Confidence            3467889999999876642  466777899999999987543


No 50 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=31.00  E-value=1e+02  Score=17.33  Aligned_cols=15  Identities=13%  Similarity=0.384  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHHHHHH
Q 015580          300 PLALAQLKEEHDEIR  314 (404)
Q Consensus       300 p~~~~~lr~Ei~~~~  314 (404)
                      .++.+.+|.|++.+-
T Consensus        10 qEIL~EvrkEl~K~K   24 (40)
T PF08776_consen   10 QEILEEVRKELQKVK   24 (40)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            467788888887764


No 51 
>PF08780 NTase_sub_bind:  Nucleotidyltransferase substrate binding protein like;  InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=30.19  E-value=1.6e+02  Score=21.69  Aligned_cols=28  Identities=18%  Similarity=0.251  Sum_probs=17.6

Q ss_pred             CccccccchhhHHH---HHHhhhhcChhhhhh
Q 015580          118 HSLLLMKGSLHKRM---HSLTMSFANSSIIRD  146 (404)
Q Consensus       118 ~~~~~~~~~~~~~~---R~~~~~~~~~~~~~~  146 (404)
                      .|++ .|++.|..+   |..+.+........+
T Consensus        72 ~glI-~d~e~Wl~m~~~RN~tsHtYde~~a~~  102 (124)
T PF08780_consen   72 AGLI-DDGEIWLDMLEDRNLTSHTYDEETAEE  102 (124)
T ss_dssp             TTSS-SHHHHHHHHHHHHHHGGGTTSHHHHHH
T ss_pred             cCCC-CCHHHHHHHHHHhccccCCCCHHHHHH
Confidence            4555 778889875   566666665544443


No 52 
>KOG3054 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.95  E-value=84  Score=26.04  Aligned_cols=26  Identities=15%  Similarity=0.255  Sum_probs=14.0

Q ss_pred             CcchHhHHHHHHHHHHHHHHHHHHhh
Q 015580            1 MAGLTLVYDLVLYISISTVIFFIIKR   26 (404)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~   26 (404)
                      |..++...++++++++++.++++.+.
T Consensus         1 m~~~v~vlVaa~llV~~i~l~l~~r~   26 (299)
T KOG3054|consen    1 MEEIVAVLVAAALLVAVILLFLWKRR   26 (299)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhh
Confidence            55555555555555555555555443


No 53 
>PF03672 UPF0154:  Uncharacterised protein family (UPF0154);  InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=28.57  E-value=49  Score=21.00  Aligned_cols=21  Identities=19%  Similarity=0.167  Sum_probs=7.9

Q ss_pred             HHHHHHHHHhhccCccccCCC
Q 015580           16 ISTVIFFIIKRSRSRRLRLPP   36 (404)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~pp   36 (404)
                      +++.+++..+...+.....||
T Consensus        11 ~~~Gff~ar~~~~k~l~~NPp   31 (64)
T PF03672_consen   11 AVIGFFIARKYMEKQLKENPP   31 (64)
T ss_pred             HHHHHHHHHHHHHHHHHHCCC
Confidence            333344333333333333443


No 54 
>PRK09458 pspB phage shock protein B; Provisional
Probab=28.56  E-value=1.4e+02  Score=19.68  Aligned_cols=7  Identities=43%  Similarity=0.562  Sum_probs=2.6

Q ss_pred             CcchHhH
Q 015580            1 MAGLTLV    7 (404)
Q Consensus         1 m~~~~~~    7 (404)
                      |...++.
T Consensus         1 m~~~fl~    7 (75)
T PRK09458          1 MSALFLA    7 (75)
T ss_pred             CcchHHH
Confidence            4433333


No 55 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=27.34  E-value=86  Score=17.49  Aligned_cols=21  Identities=10%  Similarity=0.181  Sum_probs=13.6

Q ss_pred             HHHHHHHHHh-cCHHHHHHHHH
Q 015580          288 IMTLAVKFLT-ETPLALAQLKE  308 (404)
Q Consensus       288 ~l~~~l~~l~-~~p~~~~~lr~  308 (404)
                      .+...+..++ +||++++.++.
T Consensus        14 qL~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   14 QLQSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHHHhChhHHHHHHh
Confidence            3444555555 79998887764


No 56 
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.13  E-value=73  Score=20.57  Aligned_cols=6  Identities=33%  Similarity=0.423  Sum_probs=2.5

Q ss_pred             cccCCC
Q 015580           31 RLRLPP   36 (404)
Q Consensus        31 ~~~~pp   36 (404)
                      ....||
T Consensus        33 lk~NPp   38 (71)
T COG3763          33 LKDNPP   38 (71)
T ss_pred             HhhCCC
Confidence            344443


No 57 
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=26.88  E-value=1.1e+02  Score=16.09  Aligned_cols=13  Identities=23%  Similarity=0.319  Sum_probs=6.0

Q ss_pred             CcchHhHHHHHHH
Q 015580            1 MAGLTLVYDLVLY   13 (404)
Q Consensus         1 m~~~~~~~~~~~~   13 (404)
                      |++.....+++..
T Consensus         1 MEal~Ytfll~~t   13 (31)
T PRK11875          1 MESFAYILILTLA   13 (31)
T ss_pred             ChhHHHHHHHHHH
Confidence            5555444444433


No 58 
>PRK02302 hypothetical protein; Provisional
Probab=25.27  E-value=1.2e+02  Score=20.79  Aligned_cols=35  Identities=14%  Similarity=0.114  Sum_probs=25.1

Q ss_pred             HHHHHHhccCeeeecccCccEEEecChHHHHHhhhc
Q 015580           63 IDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQN   98 (404)
Q Consensus        63 ~~~~~~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~   98 (404)
                      .+.+ +|||+|..+-=-.+.+++-+|-+.+.++..+
T Consensus        20 ~r~L-rkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         20 ARKL-SKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHHH-hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3344 4999999975444556777899998888764


No 59 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=25.16  E-value=1.3e+02  Score=20.80  Aligned_cols=31  Identities=23%  Similarity=0.304  Sum_probs=24.4

Q ss_pred             hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 015580          285 TSTIMTLAVKFLTETPLALAQLKEEHDEIRA  315 (404)
Q Consensus       285 t~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~  315 (404)
                      ...++.|-+...-..||..+.+++||+++..
T Consensus        52 sl~~lgy~v~tFnDcpeA~~eL~~eI~eAK~   82 (91)
T PF08285_consen   52 SLFTLGYGVATFNDCPEAAKELQKEIKEAKA   82 (91)
T ss_pred             HHHHHHHhhhccCCCHHHHHHHHHHHHHHHH
Confidence            3456677777777789999999999998754


No 60 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=25.06  E-value=41  Score=27.34  Aligned_cols=19  Identities=26%  Similarity=0.426  Sum_probs=17.1

Q ss_pred             hhhcCCccCCCCCCCCCCC
Q 015580          378 AVHLDHDHFKDARSFNPWR  396 (404)
Q Consensus       378 ~~~~d~~~~~~p~~F~PeR  396 (404)
                      .-+-|+.+|.|.+.|+|-|
T Consensus       193 ~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  193 PDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCcccccCccccCCCC
Confidence            4488999999999999987


No 61 
>PF05410 Peptidase_C31:  Porcine arterivirus-type cysteine proteinase alpha;  InterPro: IPR008741 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold:  Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases.   In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding.  Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad [].  This group of cysteine peptidases corresponds to MEROPS peptidase family C31 (clan CA). Type example is porcine respiratory and reproductive syndrome arterivirus-type cysteine proteinase alpha (lactate-dehydrogenase-elevating virus), which is involved in viral polyprotein processing [].; GO: 0003968 RNA-directed RNA polymerase activity, 0004197 cysteine-type endopeptidase activity, 0004252 serine-type endopeptidase activity, 0005524 ATP binding, 0008270 zinc ion binding, 0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; PDB: 3IFU_A.
Probab=24.77  E-value=71  Score=21.31  Aligned_cols=68  Identities=13%  Similarity=0.077  Sum_probs=31.3

Q ss_pred             CHHHHHHHHHHHHHHHhhcCCCCCCChhhhccCccHHHHHHhhhhccCCCcccccccc--ccccccCeeeCCCCEEee
Q 015580          299 TPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAM--TDINIKGYTIPKGWRVFA  374 (404)
Q Consensus       299 ~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~--~d~~l~g~~ip~g~~v~~  374 (404)
                      |-..|+++-.-.+.+..    ++..+...++.+.    +..-..|+||....++-...  ..+.+.+..+|.-|.|..
T Consensus        35 n~nf~qrl~~va~~~yr----dg~lt~~~l~~~q----vyergcrwypitgpvpg~~lyans~hvsd~~fpgathvlt  104 (105)
T PF05410_consen   35 NHNFQQRLVRVASVIYR----DGCLTPKHLEDLQ----VYERGCRWYPITGPVPGMGLYANSMHVSDQPFPGATHVLT  104 (105)
T ss_dssp             GGGHHHHHHHHHHHHHH----HTSB-HHHHHHTT----TTTTT-EEEE--S---S--EEE-SS-EESS--TT--EEEE
T ss_pred             chHHHHHHHHHHHHHHH----cccccHHHHHHHH----HhhcCCceeeccCCCCCceeeecceeecCCCCCCceeecc
Confidence            44566666554444433    4556666666555    45568899998765555443  345566667776666653


No 62 
>CHL00031 psbT photosystem II protein T
Probab=24.47  E-value=1e+02  Score=16.46  Aligned_cols=13  Identities=31%  Similarity=0.342  Sum_probs=6.1

Q ss_pred             CcchHhHHHHHHH
Q 015580            1 MAGLTLVYDLVLY   13 (404)
Q Consensus         1 m~~~~~~~~~~~~   13 (404)
                      |++.....+++..
T Consensus         1 MEalvYtfll~~t   13 (33)
T CHL00031          1 MEALVYTFLLVST   13 (33)
T ss_pred             CchhHHHHHHHHH
Confidence            5555544444433


No 63 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=24.43  E-value=66  Score=24.52  Aligned_cols=38  Identities=18%  Similarity=0.367  Sum_probs=24.2

Q ss_pred             cccccccCeeeCCCCEEeecc-------hhhhcCCccCCCCCCCCC
Q 015580          356 MTDINIKGYTIPKGWRVFASF-------RAVHLDHDHFKDARSFNP  394 (404)
Q Consensus       356 ~~d~~l~g~~ip~g~~v~~~~-------~~~~~d~~~~~~p~~F~P  394 (404)
                      .+|+.++|..||+|+.-+...       .-++++...|-. ..++|
T Consensus        53 ~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~   97 (145)
T PF11138_consen   53 SKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDP   97 (145)
T ss_pred             CCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCc
Confidence            478999999999999665542       234555555633 33443


No 64 
>PF07620 SLEI_Leptospira:  SLEI;  InterPro: IPR011512  This entry represents a highly conserved sequence motif found at the C-terminal of some hypothetical proteins from Leptospira interrogans.
Probab=23.53  E-value=35  Score=14.83  Aligned_cols=10  Identities=50%  Similarity=0.853  Sum_probs=6.5

Q ss_pred             CCCcCccCCC
Q 015580          394 PWRWQVNLSL  403 (404)
Q Consensus       394 PeRfl~~~~~  403 (404)
                      |-||+.++++
T Consensus         1 ~~~~~rdNsL   10 (16)
T PF07620_consen    1 PQRWLRDNSL   10 (16)
T ss_pred             CcccccCCeE
Confidence            4577776654


No 65 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=23.45  E-value=1.3e+02  Score=19.31  Aligned_cols=25  Identities=20%  Similarity=0.200  Sum_probs=20.0

Q ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHH
Q 015580          286 STIMTLAVKFLTETPLALAQLKEEH  310 (404)
Q Consensus       286 ~~~l~~~l~~l~~~p~~~~~lr~Ei  310 (404)
                      .....-++--+++|||.+.+++.-.
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~m   44 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSLM   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            4455667888999999999998754


No 66 
>PF04367 DUF502:  Protein of unknown function (DUF502);  InterPro: IPR007462 This entry contains proteins that are predicted to be integral membrane proteins.
Probab=23.44  E-value=1.1e+02  Score=21.95  Aligned_cols=39  Identities=10%  Similarity=0.092  Sum_probs=23.5

Q ss_pred             CCcccchhHHHHHHhhcCCChhHHHHHHHh-ccCeeeecccCccE
Q 015580           40 GLPFLGETLQLIAAYKTENPEPFIDVRVKR-FGSIFTTHIFGEPT   83 (404)
Q Consensus        40 ~~P~~G~~~~~~~~~~~~~~~~~~~~~~~k-yG~v~~~~l~~~~~   83 (404)
                      .+|.+|.++...+     +..+.+..-.++ +..++-+.+++...
T Consensus        33 riP~v~~iY~~~k-----~~~~~~~~~~~~~f~~vVlV~~p~~g~   72 (108)
T PF04367_consen   33 RIPLVKSIYSSIK-----QLVESFSGDKKKSFKKVVLVEFPRPGM   72 (108)
T ss_pred             HCCchHHHHHHHH-----HHHHHHhhcccccCCeEEEEEecCCCc
Confidence            4788898877765     444555444433 45677777644443


No 67 
>PRK02886 hypothetical protein; Provisional
Probab=22.31  E-value=1.5e+02  Score=20.22  Aligned_cols=31  Identities=19%  Similarity=0.235  Sum_probs=23.4

Q ss_pred             HhccCeeeecccCccEEEecChHHHHHhhhc
Q 015580           68 KRFGSIFTTHIFGEPTVFSADPETNRFILQN   98 (404)
Q Consensus        68 ~kyG~v~~~~l~~~~~vvv~~p~~~~~i~~~   98 (404)
                      ++||+|..+.=-.+.+++-+|-+.+.++...
T Consensus        22 rkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         22 RKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            4999999974444556667899998888764


No 68 
>PHA01327 hypothetical protein
Probab=22.26  E-value=54  Score=18.37  Aligned_cols=21  Identities=5%  Similarity=0.069  Sum_probs=15.8

Q ss_pred             ccCccccccchhhHHHHHHhh
Q 015580          116 GKHSLLLMKGSLHKRMHSLTM  136 (404)
Q Consensus       116 g~~~~~~~~~~~~~~~R~~~~  136 (404)
                      ..+++++..|++|+..|..+.
T Consensus        10 kr~~vinehge~wqer~drmk   30 (49)
T PHA01327         10 KRNNVINEHGEEWQERKDRMK   30 (49)
T ss_pred             ccchHHHhhHHHHHHHHHHHH
Confidence            346788888999998876554


No 69 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=22.14  E-value=1.2e+02  Score=17.32  Aligned_cols=19  Identities=11%  Similarity=-0.083  Sum_probs=14.8

Q ss_pred             HHHHHHHhcCHHHHHHHHH
Q 015580          290 TLAVKFLTETPLALAQLKE  308 (404)
Q Consensus       290 ~~~l~~l~~~p~~~~~lr~  308 (404)
                      .|-+..++++||+|.-+.-
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4567788999999987754


No 70 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=21.85  E-value=1.4e+02  Score=22.25  Aligned_cols=17  Identities=24%  Similarity=0.385  Sum_probs=7.2

Q ss_pred             HHHHHHHhhccCccccC
Q 015580           18 TVIFFIIKRSRSRRLRL   34 (404)
Q Consensus        18 ~~~~~~~~~~~~~~~~~   34 (404)
                      ++++++.....+++++.
T Consensus        13 ~l~~~~~~~~~rRR~r~   29 (130)
T PF12273_consen   13 LLFLFLFYCHNRRRRRR   29 (130)
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            33333344444444443


No 71 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=21.37  E-value=1.9e+02  Score=17.14  Aligned_cols=34  Identities=21%  Similarity=0.218  Sum_probs=22.5

Q ss_pred             HHHHHhccCeeeecccCc----cEEEecChHHHHHhhh
Q 015580           64 DVRVKRFGSIFTTHIFGE----PTVFSADPETNRFILQ   97 (404)
Q Consensus        64 ~~~~~kyG~v~~~~l~~~----~~vvv~~p~~~~~i~~   97 (404)
                      .++-.+||+|-++.+...    -.|-..+++.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            345679999998887443    2344478888777765


No 72 
>PF12606 RELT:  Tumour necrosis factor receptor superfamily member 19;  InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis).  RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=21.19  E-value=2e+02  Score=17.27  Aligned_cols=7  Identities=14%  Similarity=0.159  Sum_probs=2.6

Q ss_pred             HhhccCc
Q 015580           24 IKRSRSR   30 (404)
Q Consensus        24 ~~~~~~~   30 (404)
                      .+...++
T Consensus        24 ~K~ygYk   30 (50)
T PF12606_consen   24 LKAYGYK   30 (50)
T ss_pred             hhccccc
Confidence            3333333


No 73 
>PF15080 DUF4547:  Domain of unknown function (DUF4547)
Probab=20.70  E-value=4.1e+02  Score=20.60  Aligned_cols=49  Identities=8%  Similarity=0.144  Sum_probs=35.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhh----------HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 015580          265 FSDEEIVDFLVALLVAGYETT----------STIMTLAVKFLTETPLALAQLKEEHDEI  313 (404)
Q Consensus       265 ~~~~~~~~~~~~~~~ag~~tt----------~~~l~~~l~~l~~~p~~~~~lr~Ei~~~  313 (404)
                      +.++++.+.|..++..|..+-          ..-++.++-.|.+|+..|+.+...+.-+
T Consensus       113 LqE~dv~aLCtFfiahgnkaehy~a~~R~~yi~dv~~mItnmVkNqalq~~llrAvqvi  171 (196)
T PF15080_consen  113 LQEGDVTALCTFFIAHGNKAEHYAAKVRQMYIRDVTFMITNMVKNQALQDGLLRAVQVI  171 (196)
T ss_pred             CCcccHHHHHHHHHHhcchHhHhHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            566677777776666665432          3345678889999999999988877644


No 74 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=20.69  E-value=62  Score=23.81  Aligned_cols=31  Identities=35%  Similarity=0.377  Sum_probs=21.4

Q ss_pred             ccccccccccCeeeCCCCEEeecchhhhcCCccC
Q 015580          353 RRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHF  386 (404)
Q Consensus       353 r~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~  386 (404)
                      -.+.+|..++|-.||+|+.|+.--.   .|+++|
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~~k~---~ddelW  101 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVGVKI---TDDELW  101 (122)
T ss_pred             EecCCCcccCCeeecceEEEEEEEe---cCHHHH
Confidence            3445688999999999998864221   345555


Done!