Query 015585
Match_columns 404
No_of_seqs 219 out of 2762
Neff 10.8
Searched_HMMs 13730
Date Mon Mar 25 15:10:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015585.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015585hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2astb2 c.10.1.3 (B:2136-2419) 99.9 1.6E-23 1.2E-27 182.3 24.0 250 112-385 3-255 (284)
2 d2astb2 c.10.1.3 (B:2136-2419) 99.9 8.3E-24 6E-28 184.1 21.2 209 13-239 42-252 (284)
3 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.9 5.5E-22 4E-26 184.9 27.5 345 17-391 2-439 (460)
4 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 2.2E-17 1.6E-21 153.4 30.8 219 155-383 220-458 (460)
5 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.8 1.7E-16 1.3E-20 141.6 26.9 253 106-366 28-317 (344)
6 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.7 4.4E-16 3.2E-20 138.9 22.7 255 128-395 24-319 (344)
7 d2omza2 c.10.2.1 (A:33-416) In 99.5 1.6E-14 1.1E-18 130.7 12.5 303 14-388 41-383 (384)
8 d2omza2 c.10.2.1 (A:33-416) In 99.4 4.6E-13 3.3E-17 120.9 13.2 293 10-361 59-383 (384)
9 d1xkua_ c.10.2.7 (A:) Decorin 99.2 3.2E-12 2.3E-16 111.5 5.0 59 17-85 31-89 (305)
10 d1h6ua2 c.10.2.1 (A:36-262) In 99.2 3.3E-11 2.4E-15 100.0 8.9 204 21-275 23-226 (227)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.1 2.7E-11 1.9E-15 104.3 7.1 133 132-275 102-234 (284)
12 d1ozna_ c.10.2.7 (A:) Reticulo 99.1 2.5E-12 1.8E-16 110.9 -0.9 208 135-365 32-239 (284)
13 d1p9ag_ c.10.2.7 (G:) von Will 99.1 5.3E-12 3.8E-16 107.7 0.9 58 162-223 32-89 (266)
14 d2omxa2 c.10.2.1 (A:37-235) In 99.0 5.7E-10 4.2E-14 90.3 10.3 161 41-241 39-199 (199)
15 d2omxa2 c.10.2.1 (A:37-235) In 99.0 5E-10 3.6E-14 90.6 9.7 162 73-271 38-199 (199)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.0 1.6E-09 1.2E-13 89.5 11.9 191 12-245 36-226 (227)
17 d1xkua_ c.10.2.7 (A:) Decorin 99.0 1.9E-10 1.4E-14 100.0 6.4 204 12-247 50-253 (305)
18 d1p9ag_ c.10.2.7 (G:) von Will 99.0 6.8E-11 4.9E-15 100.6 3.2 201 13-247 6-206 (266)
19 d1pgva_ c.10.1.1 (A:) Tropomod 99.0 3.9E-09 2.8E-13 82.5 12.8 132 226-363 5-143 (167)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.0 1.4E-09 1.1E-13 88.6 9.9 164 41-244 45-208 (210)
21 d1h6ta2 c.10.2.1 (A:31-240) In 98.9 3.7E-09 2.7E-13 86.1 10.0 164 74-274 45-208 (210)
22 d1pgva_ c.10.1.1 (A:) Tropomod 98.9 2.1E-08 1.5E-12 78.2 13.8 119 209-333 13-140 (167)
23 d1ogqa_ c.10.2.8 (A:) Polygala 98.9 5.4E-13 3.9E-17 116.9 -14.7 63 323-393 243-306 (313)
24 d1ogqa_ c.10.2.8 (A:) Polygala 98.9 5.2E-11 3.8E-15 104.0 -2.1 59 18-85 51-111 (313)
25 d1io0a_ c.10.1.1 (A:) Tropomod 98.8 2.1E-08 1.5E-12 78.2 11.2 132 226-363 7-144 (166)
26 d1io0a_ c.10.1.1 (A:) Tropomod 98.8 8.3E-08 6E-12 74.7 14.8 121 208-334 14-142 (166)
27 d1a9na_ c.10.2.4 (A:) Spliceso 98.7 6.4E-09 4.7E-13 80.7 4.0 109 13-146 14-123 (162)
28 d1jl5a_ c.10.2.6 (A:) Leucine 98.6 1.4E-08 9.8E-13 89.6 4.3 134 17-195 38-171 (353)
29 d1a9na_ c.10.2.4 (A:) Spliceso 98.5 2E-08 1.4E-12 77.8 3.4 40 184-224 85-125 (162)
30 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.4 8.7E-10 6.4E-14 92.2 -7.8 41 184-224 76-116 (242)
31 d1jl5a_ c.10.2.6 (A:) Leucine 98.4 1.1E-07 7.9E-12 83.6 4.5 271 16-366 57-339 (353)
32 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.4 4E-09 2.9E-13 88.1 -4.8 34 18-52 30-63 (242)
33 d1m9la_ c.10.3.1 (A:) Outer ar 98.3 3E-08 2.2E-12 79.6 -1.1 57 266-334 93-150 (198)
34 d1m9la_ c.10.3.1 (A:) Outer ar 98.3 4E-08 2.9E-12 78.8 -0.8 104 41-171 47-150 (198)
35 d1dcea3 c.10.2.2 (A:444-567) R 98.3 2.5E-07 1.8E-11 67.9 3.6 42 182-224 61-103 (124)
36 d1dcea3 c.10.2.2 (A:444-567) R 98.2 2.7E-07 2E-11 67.6 3.4 37 107-145 63-100 (124)
37 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.1 6.2E-08 4.5E-12 77.5 -3.6 112 236-365 29-140 (192)
38 d1w8aa_ c.10.2.7 (A:) Slit {Fr 97.9 8E-07 5.8E-11 70.7 0.4 36 109-145 29-64 (192)
39 d2ifga3 c.10.2.7 (A:36-191) Hi 97.8 3.2E-06 2.4E-10 64.5 1.8 41 323-366 55-95 (156)
40 d2ifga3 c.10.2.7 (A:36-191) Hi 97.2 7E-05 5.1E-09 56.8 2.3 40 183-223 53-92 (156)
41 d1koha1 c.10.2.3 (A:201-362) m 97.0 0.00019 1.4E-08 54.6 3.2 86 286-382 59-149 (162)
42 d1koha1 c.10.2.3 (A:201-362) m 96.5 0.00067 4.8E-08 51.5 3.2 11 185-195 90-100 (162)
No 1
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.6e-23 Score=182.28 Aligned_cols=250 Identities=16% Similarity=0.233 Sum_probs=203.1
Q ss_pred cEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCCCCCHHHHHHhh-CCCCCCE
Q 015585 112 ESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCRLITSETVKKLA-SSRNLEV 190 (404)
Q Consensus 112 ~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~-~~~~L~~ 190 (404)
+.+|+++ ..+....+..+... ....+++..... ... . ........|++|++++|. +.+..+..+. +|++|++
T Consensus 3 ~~lDLs~-~~l~~~~l~~l~~~--~~~~lrl~~~~~-~~~-~-~~~~~~~~L~~LdLs~~~-i~~~~l~~l~~~c~~L~~ 75 (284)
T d2astb2 3 QTLDLTG-KNLHPDVTGRLLSQ--GVIAFRCPRSFM-DQP-L-AEHFSPFRVQHMDLSNSV-IEVSTLHGILSQCSKLQN 75 (284)
T ss_dssp SEEECTT-CBCCHHHHHHHHHT--TCSEEECTTCEE-CSC-C-CSCCCCBCCCEEECTTCE-ECHHHHHHHHTTBCCCSE
T ss_pred CEEECCC-CCCCchHHHHHHhc--cceEeecccccc-ccc-h-hhhccCCCCCEEECCCCc-cCHHHHHHHHHhCCCccc
Confidence 5789988 46666666666553 455666654421 000 0 001134689999999875 7777776654 7999999
Q ss_pred EeccCCCCCChHHHHhhhCCCCCCEEEccCC-ccCHHHHHHHHhcCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCcc
Q 015585 191 LDLGGCKSIADTCLRSISCLRKLTALNLTGA-DITDSGLSILAQGNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLT 269 (404)
Q Consensus 191 L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~l~~~~l~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~ 269 (404)
|++.+| .+++..+..++.+++|++|++++| .+++.++..++..+++|++|++++|..+++.++..... ..++.|+
T Consensus 76 L~L~~~-~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~---~~~~~L~ 151 (284)
T d2astb2 76 LSLEGL-RLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA---HVSETIT 151 (284)
T ss_dssp EECTTC-BCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHH---HSCTTCC
T ss_pred cccccc-CCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhc---ccccccc
Confidence 999997 688888899999999999999996 89999999999999999999999998899888765442 3567999
Q ss_pred EEecCCC-CCCCHHHHHHHHHhCCCCceEeecCCCCCCHHHHHHHHhhCCCcccCCCCcEEeccCCCCCCHHHHHhhhcC
Q 015585 270 TLDLGYM-PGISDDGILTIAAAGIGIIDLCVRSCFYVTDASVEALARKQPDQEKSKQLRRLDLCNCIGLSVDSLRWVKRP 348 (404)
Q Consensus 270 ~L~l~~~-~~l~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~~~i~~~~~~~l~~~ 348 (404)
.|++++| ..+++.++..+...||+|++|++++|..+++.++..+++ +++|++|++++|+.+++.++..+.
T Consensus 152 ~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~-------~~~L~~L~L~~C~~i~~~~l~~L~-- 222 (284)
T d2astb2 152 QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ-------LNYLQHLSLSRCYDIIPETLLELG-- 222 (284)
T ss_dssp EEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGG-------CTTCCEEECTTCTTCCGGGGGGGG--
T ss_pred hhhhcccccccccccccccccccccccccccccccCCCchhhhhhcc-------cCcCCEEECCCCCCCChHHHHHHh--
Confidence 9999987 468999999998899999999999998899998888875 999999999999999999988876
Q ss_pred CCCcccEEecCCccccCCChHHHHHHHhcCCccEEEe
Q 015585 349 SFRGLHWLGIGQTRLASKGNPVITEIHNERPWLTFCL 385 (404)
Q Consensus 349 ~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~l~l~~ 385 (404)
.+|+|+.|+++++. .+..+..+++.+|.+++..
T Consensus 223 ~~~~L~~L~l~~~~----~d~~l~~l~~~lp~L~i~~ 255 (284)
T d2astb2 223 EIPTLKTLQVFGIV----PDGTLQLLKEALPHLQINC 255 (284)
T ss_dssp GCTTCCEEECTTSS----CTTCHHHHHHHSTTSEESC
T ss_pred cCCCCCEEeeeCCC----CHHHHHHHHHhCccccccC
Confidence 48999999999983 6778889999999998743
No 2
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=8.3e-24 Score=184.13 Aligned_cols=209 Identities=18% Similarity=0.271 Sum_probs=179.9
Q ss_pred ccCCCCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCCC
Q 015585 13 YYSSFNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQGT 92 (404)
Q Consensus 13 ~~~~~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~ 92 (404)
.....+|++|+++++.+++..+..+...|++|++|++.+| .+++..+..++.+++|++|++++|.
T Consensus 42 ~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~---------~l~~~~~~~l~~~~~L~~L~Ls~c~------ 106 (284)
T d2astb2 42 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL---------RLSDPIVNTLAKNSNLVRLNLSGCS------ 106 (284)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTC---------BCCHHHHHHHTTCTTCSEEECTTCB------
T ss_pred hccCCCCCEEECCCCccCHHHHHHHHHhCCCccccccccc---------CCCcHHHHHHhcCCCCcCccccccc------
Confidence 3455689999999888998888888888999999999996 5677888888899999999998874
Q ss_pred ccccChhhHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHH-hCCCCcEEEecCC-CCCCHHHHHHHHcCCCCccEEEccC
Q 015585 93 FKRVNDMGMFLLSEGCKGLESVRLGGFSKVSDAGFAAILL-SCHSLKKFEVRSA-SFLSDLAFHDLTGVPCALVEVRLLW 170 (404)
Q Consensus 93 ~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~-~~~~L~~L~l~~~-~~~~~~~l~~~~~~~~~L~~L~l~~ 170 (404)
.+++.++..+...+++|++|++++|..+++.++...+. .+++|+.|+++++ ..+++..+..+...+|+|++|++++
T Consensus 107 --~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~ 184 (284)
T d2astb2 107 --GFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSD 184 (284)
T ss_dssp --SCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTT
T ss_pred --cccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccccccccccccccccccccccccc
Confidence 47888888888889999999999998898888765544 4579999999987 4578888888888899999999999
Q ss_pred CCCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCccCHHHHHHHHhcCCCcC
Q 015585 171 CRLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADITDSGLSILAQGNLPIM 239 (404)
Q Consensus 171 ~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~~~~~~L~ 239 (404)
|..+++..+..++++++|++|++++|..+++.++..++.+|+|+.|++.++ +++.++..+...+|+|+
T Consensus 185 ~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L~ 252 (284)
T d2astb2 185 SVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQ 252 (284)
T ss_dssp CTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSE
T ss_pred ccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCcccc
Confidence 888888888888899999999999998899988888889999999999887 78888888887788776
No 3
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=5.5e-22 Score=184.94 Aligned_cols=345 Identities=19% Similarity=0.225 Sum_probs=174.6
Q ss_pred CCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhh----cCCCCCceEEecccccCCCCC
Q 015585 17 FNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSL----GSCHHLTGLSLTRCRHNHQGT 92 (404)
Q Consensus 17 ~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l----~~~~~L~~L~l~~~~~~~~~~ 92 (404)
++|+.||++++.+++..+..+...++++++|+|.+| .+++.++..+ ..+++|+.|+++++
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~---------~i~~~~~~~l~~~L~~~~~L~~LdLs~N------- 65 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDC---------GLTEARCKDISSALRVNPALAELNLRSN------- 65 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESS---------CCCHHHHHHHHHHHHTCTTCCEEECTTC-------
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCC---------CCCHHHHHHHHHHHhcCCCCCEEECcCC-------
Confidence 357777777777777777776666777777777776 3555554443 46777777777664
Q ss_pred ccccChhhHHHHHhcC----CCCcEEEcCCCCCCCHHHHHHH---HHhCCCCcEEEecCCCCCCHHHHHHH---------
Q 015585 93 FKRVNDMGMFLLSEGC----KGLESVRLGGFSKVSDAGFAAI---LLSCHSLKKFEVRSASFLSDLAFHDL--------- 156 (404)
Q Consensus 93 ~~~~~~~~l~~l~~~~----~~L~~L~l~~~~~~~~~~~~~l---~~~~~~L~~L~l~~~~~~~~~~l~~~--------- 156 (404)
.+.+.++..+...+ ++|++|++++| .+++.++..+ +..+++|++|+++++. ++...+..+
T Consensus 66 --~i~~~~~~~l~~~l~~~~~~L~~L~L~~n-~it~~~~~~l~~~l~~~~~L~~L~L~~N~-i~~~~~~~l~~~l~~~~~ 141 (460)
T d1z7xw1 66 --ELGDVGVHCVLQGLQTPSCKIQKLSLQNC-CLTGAGCGVLSSTLRTLPTLQELHLSDNL-LGDAGLQLLCEGLLDPQC 141 (460)
T ss_dssp --CCHHHHHHHHHHTTCSTTCCCCEEECTTS-CCBGGGHHHHHHHTTSCTTCCEEECCSSB-CHHHHHHHHHHHHTSTTC
T ss_pred --cCChHHHHHHHHHHhcCCCCCCEEECCCC-Cccccccccccchhhcccccccccccccc-chhhhhhhhhhccccccc
Confidence 25555555554432 35777777775 4555444333 3345677777776653 222111111
Q ss_pred -----------------------HcCCCCccE-----------------------------EEccCCCCCCHH---HHHH
Q 015585 157 -----------------------TGVPCALVE-----------------------------VRLLWCRLITSE---TVKK 181 (404)
Q Consensus 157 -----------------------~~~~~~L~~-----------------------------L~l~~~~~~~~~---~~~~ 181 (404)
....+.++. +.+.++...... ....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (460)
T d1z7xw1 142 RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 221 (460)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhccccc
Confidence 111123333 333332211110 1111
Q ss_pred hhCCCCCCEEeccCCCCCChHHHHh-----hhCCCCCCEEEccCCccCHHHHHHHH---hcCCCcCEEeecCCCCCcHHH
Q 015585 182 LASSRNLEVLDLGGCKSIADTCLRS-----ISCLRKLTALNLTGADITDSGLSILA---QGNLPIMNLCLRGCKRVTDKG 253 (404)
Q Consensus 182 l~~~~~L~~L~l~~~~~~~~~~~~~-----l~~~~~L~~L~l~~~~l~~~~l~~l~---~~~~~L~~L~l~~~~~l~~~~ 253 (404)
+...+.++.+.+.++ ...+..... ......++.++++++.+.......+. ...+.++.++++++. +++.+
T Consensus 222 l~~~~~~~~l~~~~n-~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~-i~~~~ 299 (460)
T d1z7xw1 222 VASKASLRELALGSN-KLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE-LGDEG 299 (460)
T ss_dssp HHHCTTCCEEECCSS-BCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC-CHHHH
T ss_pred ccccccccccchhhc-cccccccchhhccccccccccccccccccccccccccccccccccccccccccccccc-ccccc
Confidence 223455566666552 333222211 12345666666666666554433222 235566666666654 55555
Q ss_pred HHHHHhhcCCCCCCccEEecCCCCCCCHHHHHH---HHHhCCCCceEeecCCCCCCHHHHHHHHhhCCCcccCCCCcEEe
Q 015585 254 ISHLLCVGGTISQSLTTLDLGYMPGISDDGILT---IAAAGIGIIDLCVRSCFYVTDASVEALARKQPDQEKSKQLRRLD 330 (404)
Q Consensus 254 ~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~~~---l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~ 330 (404)
+..+........+.|+.+.++++ .+++.+... ....+++|++|+|++|. ++++++..++..+.. ..+.|++|+
T Consensus 300 ~~~l~~~l~~~~~~L~~l~l~~~-~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~-i~~~g~~~l~~~l~~--~~~~L~~L~ 375 (460)
T d1z7xw1 300 ARLLCETLLEPGCQLESLWVKSC-SFTAACCSHFSSVLAQNRFLLELQISNNR-LEDAGVRELCQGLGQ--PGSVLRVLW 375 (460)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTS-CCBGGGHHHHHHHHHHCSSCCEEECCSSB-CHHHHHHHHHHHHTS--TTCCCCEEE
T ss_pred cchhhcccccccccccccccccc-chhhhhhhhcccccccccchhhhheeeec-ccCcccchhhhhhhc--ccCCCCEEE
Confidence 54443211123345666666665 444433322 22344566666666663 666665555543220 244566666
Q ss_pred ccCCCCCCHHHHHhhh--cCCCCcccEEecCCccccCCChHHHHHHHh----cCCccE-EEecccccc
Q 015585 331 LCNCIGLSVDSLRWVK--RPSFRGLHWLGIGQTRLASKGNPVITEIHN----ERPWLT-FCLDGCEIG 391 (404)
Q Consensus 331 l~~~~~i~~~~~~~l~--~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~----~~~~l~-l~~~~~~~~ 391 (404)
+++| .+++.++..+. ...+++|++|++++|.+ +++.+..+++ ....++ +.+.++.+.
T Consensus 376 Ls~n-~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i---~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 376 LADC-DVSDSSCSSLAATLLANHSLRELDLSNNCL---GDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp CTTS-CCCHHHHHHHHHHHHHCCCCCEEECCSSSC---CHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred CCCC-CCChHHHHHHHHHHhcCCCCCEEECCCCcC---CHHHHHHHHHHHHhCCCccCEEECCCCCCC
Confidence 6665 56655554432 11356666666666665 3333333322 222344 555555543
No 4
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=2.2e-17 Score=153.38 Aligned_cols=219 Identities=21% Similarity=0.263 Sum_probs=164.8
Q ss_pred HHHcCCCCccEEEccCCCCCCHHHHHH----hh-CCCCCCEEeccCCCCCChHHHH----hhhCCCCCCEEEccCCccCH
Q 015585 155 DLTGVPCALVEVRLLWCRLITSETVKK----LA-SSRNLEVLDLGGCKSIADTCLR----SISCLRKLTALNLTGADITD 225 (404)
Q Consensus 155 ~~~~~~~~L~~L~l~~~~~~~~~~~~~----l~-~~~~L~~L~l~~~~~~~~~~~~----~l~~~~~L~~L~l~~~~l~~ 225 (404)
......+.++.+.+.++. ..+..+.. .. ....++.++++++ .+...... .+...+.++.++++.+.+++
T Consensus 220 ~~l~~~~~~~~l~~~~n~-~~~~~~~~~~~~~~~~~~~l~~l~l~~n-~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~ 297 (460)
T d1z7xw1 220 GIVASKASLRELALGSNK-LGDVGMAELCPGLLHPSSRLRTLWIWEC-GITAKGCGDLCRVLRAKESLKELSLAGNELGD 297 (460)
T ss_dssp HHHHHCTTCCEEECCSSB-CHHHHHHHHHHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHHHHHCTTCCEEECTTCCCHH
T ss_pred ccccccccccccchhhcc-ccccccchhhcccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence 344467889999998865 33333222 12 4789999999985 55544332 34568899999999999999
Q ss_pred HHHHHHHh----cCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHHHHHHHHh----CCCCceE
Q 015585 226 SGLSILAQ----GNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDGILTIAAA----GIGIIDL 297 (404)
Q Consensus 226 ~~l~~l~~----~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~~----~~~L~~L 297 (404)
.++..++. ....|+.+.++++. +++.+...+.. .....++|++|+++++ .+++.++..+++. .+.|++|
T Consensus 298 ~~~~~l~~~l~~~~~~L~~l~l~~~~-l~~~~~~~l~~-~~~~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~L 374 (460)
T d1z7xw1 298 EGARLLCETLLEPGCQLESLWVKSCS-FTAACCSHFSS-VLAQNRFLLELQISNN-RLEDAGVRELCQGLGQPGSVLRVL 374 (460)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSC-CBGGGHHHHHH-HHHHCSSCCEEECCSS-BCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred cccchhhccccccccccccccccccc-hhhhhhhhccc-ccccccchhhhheeee-cccCcccchhhhhhhcccCCCCEE
Confidence 88877754 34679999999886 77666554431 0034678999999996 7888887776543 4679999
Q ss_pred eecCCCCCCHHHHHHHHhhCCCcccCCCCcEEeccCCCCCCHHHHHhhh---cCCCCcccEEecCCccccCCChHHHHHH
Q 015585 298 CVRSCFYVTDASVEALARKQPDQEKSKQLRRLDLCNCIGLSVDSLRWVK---RPSFRGLHWLGIGQTRLASKGNPVITEI 374 (404)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~~~i~~~~~~~l~---~~~~~~L~~L~l~~~~l~~~~~~~~~~~ 374 (404)
++++| .+++.++.+++..+. .+++|++|++++ +.+++.++..+. ......|+.|++.++.+.....+.+..+
T Consensus 375 ~Ls~n-~i~~~~~~~l~~~l~---~~~~L~~L~Ls~-N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~~~l~~l 449 (460)
T d1z7xw1 375 WLADC-DVSDSSCSSLAATLL---ANHSLRELDLSN-NCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQAL 449 (460)
T ss_dssp ECTTS-CCCHHHHHHHHHHHH---HCCCCCEEECCS-SSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHHHHH
T ss_pred ECCCC-CCChHHHHHHHHHHh---cCCCCCEEECCC-CcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHHHHHHHHHH
Confidence 99999 599999888877555 689999999999 589998887664 1234579999999999876667788888
Q ss_pred HhcCCccEE
Q 015585 375 HNERPWLTF 383 (404)
Q Consensus 375 ~~~~~~l~l 383 (404)
.+..|++++
T Consensus 450 ~~~~~~l~~ 458 (460)
T d1z7xw1 450 EKDKPSLRV 458 (460)
T ss_dssp HHHCTTSEE
T ss_pred HHhCCCCEE
Confidence 899999884
No 5
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.76 E-value=1.7e-16 Score=141.64 Aligned_cols=253 Identities=17% Similarity=0.156 Sum_probs=165.3
Q ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHh---CCCCcEEEecCCCC--CC---HHH---HHHHHcCCCCccEEEccCCCCC
Q 015585 106 EGCKGLESVRLGGFSKVSDAGFAAILLS---CHSLKKFEVRSASF--LS---DLA---FHDLTGVPCALVEVRLLWCRLI 174 (404)
Q Consensus 106 ~~~~~L~~L~l~~~~~~~~~~~~~l~~~---~~~L~~L~l~~~~~--~~---~~~---l~~~~~~~~~L~~L~l~~~~~~ 174 (404)
.....|++|+++++ .+++.++..+... .++|+.++++++.. .. ... +......+++|++|+++++. +
T Consensus 28 ~~~~~l~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~-i 105 (344)
T d2ca6a1 28 LEDDSVKEIVLSGN-TIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA-F 105 (344)
T ss_dssp HHCSCCCEEECTTS-EECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC-C
T ss_pred hhCCCCCEEECcCC-cCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc-c
Confidence 34556666766663 5666665555433 35666666665421 11 111 22333456677777777654 4
Q ss_pred CHHHHHHh----hCCCCCCEEeccCCCCCChHHHHhh-------------hCCCCCCEEEccCCccCHHHHHHHHh---c
Q 015585 175 TSETVKKL----ASSRNLEVLDLGGCKSIADTCLRSI-------------SCLRKLTALNLTGADITDSGLSILAQ---G 234 (404)
Q Consensus 175 ~~~~~~~l----~~~~~L~~L~l~~~~~~~~~~~~~l-------------~~~~~L~~L~l~~~~l~~~~l~~l~~---~ 234 (404)
++.++..+ ..+++|++|++++| .+++.+...+ ...+.|+.+.++.+.+++.+...++. .
T Consensus 106 ~~~~~~~l~~~l~~~~~L~~L~l~~n-~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~ 184 (344)
T d2ca6a1 106 GPTAQEPLIDFLSKHTPLEHLYLHNN-GLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 184 (344)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSS-CCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred ccccccchhhhhcccccchheecccc-cccccccccccccccccccccccccCcccceeecccccccccccccccchhhh
Confidence 44333333 25677777777774 4544333222 24678889999888888776655543 5
Q ss_pred CCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHHHHHHH---HhCCCCceEeecCCCCCCHHHHH
Q 015585 235 NLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDGILTIA---AAGIGIIDLCVRSCFYVTDASVE 311 (404)
Q Consensus 235 ~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~---~~~~~L~~L~l~~~~~~~~~~~~ 311 (404)
++.|+.|++++|. ++++++..+.......+++|+.|+++++ .+++.+...+. ..+++|++|++++|. +++.++.
T Consensus 185 ~~~L~~L~L~~n~-i~~~g~~~~l~~~l~~~~~L~~L~Ls~N-~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~-i~~~g~~ 261 (344)
T d2ca6a1 185 HRLLHTVKMVQNG-IRPEGIEHLLLEGLAYCQELKVLDLQDN-TFTHLGSSALAIALKSWPNLRELGLNDCL-LSARGAA 261 (344)
T ss_dssp CTTCCEEECCSSC-CCHHHHHHHHHTTGGGCTTCCEEECCSS-CCHHHHHHHHHHHGGGCTTCCEEECTTCC-CCHHHHH
T ss_pred hhhhccccccccc-ccccccccchhhhhcchhhhcccccccc-cccccccccccccccccccchhhhhhcCc-cCchhhH
Confidence 7889999998886 7777655433212246788999999885 67777766554 457889999999995 9998888
Q ss_pred HHHhhCCCcccCCCCcEEeccCCCCCCHHHHHhhhc---CCCCcccEEecCCccccCC
Q 015585 312 ALARKQPDQEKSKQLRRLDLCNCIGLSVDSLRWVKR---PSFRGLHWLGIGQTRLASK 366 (404)
Q Consensus 312 ~l~~~~~~~~~~~~L~~L~l~~~~~i~~~~~~~l~~---~~~~~L~~L~l~~~~l~~~ 366 (404)
.++..+... ..+.|+.|+++++ .++..++..+.. ..+++|+.|++++|.+...
T Consensus 262 ~l~~~l~~~-~~~~L~~L~ls~N-~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 262 AVVDAFSKL-ENIGLQTLRLQYN-EIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HHHHHHHTC-SSCCCCEEECCSS-CCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHhhhc-cCCCCCEEECCCC-cCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 887654310 2467999999994 788887766642 2478899999999998653
No 6
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.72 E-value=4.4e-16 Score=138.94 Aligned_cols=255 Identities=18% Similarity=0.162 Sum_probs=188.1
Q ss_pred HHHHHhCCCCcEEEecCCCCCCHHHHHHHH---cCCCCccEEEccCCCC--C---CHHHHHH----hhCCCCCCEEeccC
Q 015585 128 AAILLSCHSLKKFEVRSASFLSDLAFHDLT---GVPCALVEVRLLWCRL--I---TSETVKK----LASSRNLEVLDLGG 195 (404)
Q Consensus 128 ~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~---~~~~~L~~L~l~~~~~--~---~~~~~~~----l~~~~~L~~L~l~~ 195 (404)
...+.....|+.|+++++. ++...+..+. ...+.|+.++++++.. . ....+.. +..+++|++|++++
T Consensus 24 ~~~L~~~~~l~~L~Ls~n~-i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 24 FAVLLEDDSVKEIVLSGNT-IGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp SHHHHHCSCCCEEECTTSE-ECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHhhCCCCCEEECcCCc-CCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 3346677999999999984 7777766654 4468999999987632 1 1223333 44789999999998
Q ss_pred CCCCChHHHHhh----hCCCCCCEEEccCCccCHHHHHHHHh------------cCCCcCEEeecCCCCCcHHHHHHHHh
Q 015585 196 CKSIADTCLRSI----SCLRKLTALNLTGADITDSGLSILAQ------------GNLPIMNLCLRGCKRVTDKGISHLLC 259 (404)
Q Consensus 196 ~~~~~~~~~~~l----~~~~~L~~L~l~~~~l~~~~l~~l~~------------~~~~L~~L~l~~~~~l~~~~~~~l~~ 259 (404)
| .+++..+..+ ...++|++|++.+|.+++.+...++. ..+.|+.+.++++. +++.++..+..
T Consensus 103 n-~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~-i~~~~~~~l~~ 180 (344)
T d2ca6a1 103 N-AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR-LENGSMKEWAK 180 (344)
T ss_dssp C-CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC-CTGGGHHHHHH
T ss_pred c-ccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccc-ccccccccccc
Confidence 5 6666555443 46899999999999887765444432 46789999998876 77666554431
Q ss_pred hcCCCCCCccEEecCCCCCCCHHHHHHH----HHhCCCCceEeecCCCCCCHHHHHHHHhhCCCcccCCCCcEEeccCCC
Q 015585 260 VGGTISQSLTTLDLGYMPGISDDGILTI----AAAGIGIIDLCVRSCFYVTDASVEALARKQPDQEKSKQLRRLDLCNCI 335 (404)
Q Consensus 260 ~~~~~~~~L~~L~l~~~~~l~~~~~~~l----~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~~ 335 (404)
.....+.|++|+++++ .+++.++..+ ...+++|+.|++++|. +++.+...++..+. .+++|+.|++++|
T Consensus 181 -~l~~~~~L~~L~L~~n-~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~-i~~~g~~~L~~~l~---~~~~L~~L~Ls~n- 253 (344)
T d2ca6a1 181 -TFQSHRLLHTVKMVQN-GIRPEGIEHLLLEGLAYCQELKVLDLQDNT-FTHLGSSALAIALK---SWPNLRELGLNDC- 253 (344)
T ss_dssp -HHHHCTTCCEEECCSS-CCCHHHHHHHHHTTGGGCTTCCEEECCSSC-CHHHHHHHHHHHGG---GCTTCCEEECTTC-
T ss_pred -hhhhhhhhcccccccc-cccccccccchhhhhcchhhhccccccccc-cccccccccccccc---ccccchhhhhhcC-
Confidence 0135678999999996 7888775543 2347899999999995 99999988887766 7999999999997
Q ss_pred CCCHHHHHhhh----cCCCCcccEEecCCccccCCChHHHHHH----HhcCCccE-EEeccccccccCC
Q 015585 336 GLSVDSLRWVK----RPSFRGLHWLGIGQTRLASKGNPVITEI----HNERPWLT-FCLDGCEIGCHDG 395 (404)
Q Consensus 336 ~i~~~~~~~l~----~~~~~~L~~L~l~~~~l~~~~~~~~~~~----~~~~~~l~-l~~~~~~~~~~~~ 395 (404)
.+++.+...+. ....++|++|++++|.+ +.+.+..+ ..+.+.++ +++.+|.+..+++
T Consensus 254 ~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i---~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~~~ 319 (344)
T d2ca6a1 254 LLSARGAAAVVDAFSKLENIGLQTLRLQYNEI---ELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 319 (344)
T ss_dssp CCCHHHHHHHHHHHHTCSSCCCCEEECCSSCC---BHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred ccCchhhHHHHHHhhhccCCCCCEEECCCCcC---ChHHHHHHHHHHHccCCCCCEEECCCCcCCCcch
Confidence 79988777664 22367899999999998 44444444 34688898 9999999976543
No 7
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.54 E-value=1.6e-14 Score=130.72 Aligned_cols=303 Identities=17% Similarity=0.218 Sum_probs=186.9
Q ss_pred cCCCCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCCCc
Q 015585 14 YSSFNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQGTF 93 (404)
Q Consensus 14 ~~~~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~ 93 (404)
..+.+|++|+++++.+++ +..+ +.+++|++|++++|. +++ +..++.+++|++|+++++. +
T Consensus 41 ~~l~~l~~L~l~~~~I~~--l~gl-~~L~nL~~L~Ls~N~---------l~~--l~~l~~L~~L~~L~L~~n~------i 100 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKS--IDGV-EYLNNLTQINFSNNQ---------LTD--ITPLKNLTKLVDILMNNNQ------I 100 (384)
T ss_dssp HHHTTCCEEECCSSCCCC--CTTG-GGCTTCCEEECCSSC---------CCC--CGGGTTCTTCCEEECCSSC------C
T ss_pred HHhCCCCEEECCCCCCCC--cccc-ccCCCCCEEeCcCCc---------CCC--CccccCCcccccccccccc------c
Confidence 345678888888877764 2333 348889999988863 332 2347788888899888764 1
Q ss_pred cccChhhHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCC-----------------------CCC-
Q 015585 94 KRVNDMGMFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSAS-----------------------FLS- 149 (404)
Q Consensus 94 ~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~-----------------------~~~- 149 (404)
..+.+ ...+++|+.|+++++ ..++... ......+.......+. ...
T Consensus 101 ~~i~~------l~~l~~L~~L~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (384)
T d2omza2 101 ADITP------LANLTNLTGLTLFNN-QITDIDP---LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKP 170 (384)
T ss_dssp CCCGG------GTTCTTCCEEECCSS-CCCCCGG---GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGG
T ss_pred ccccc------ccccccccccccccc-ccccccc---ccccccccccccccccccccccccccccccccccccccchhhh
Confidence 22221 246788888888764 2222111 0111222222111100 000
Q ss_pred ---------------HHHHHHHHcCCCCccEEEccCCCCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCC
Q 015585 150 ---------------DLAFHDLTGVPCALVEVRLLWCRLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLT 214 (404)
Q Consensus 150 ---------------~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~ 214 (404)
..........++.++.+.++++. +.. +.....+++|++|+++++ .+.+ +..+..+++|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~-i~~--~~~~~~~~~L~~L~l~~n-~l~~--~~~l~~l~~L~ 244 (384)
T d2omza2 171 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ-ISD--ITPLGILTNLDELSLNGN-QLKD--IGTLASLTNLT 244 (384)
T ss_dssp GTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSC-CCC--CGGGGGCTTCCEEECCSS-CCCC--CGGGGGCTTCS
T ss_pred hccccccccccccccccccccccccccccceeeccCCc-cCC--CCcccccCCCCEEECCCC-CCCC--cchhhcccccc
Confidence 00001122356788889888764 322 223456789999999885 4543 34566789999
Q ss_pred EEEccCCccCHHHHHHHHhcCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHHHHHHHHhCCCC
Q 015585 215 ALNLTGADITDSGLSILAQGNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDGILTIAAAGIGI 294 (404)
Q Consensus 215 ~L~l~~~~l~~~~l~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~L 294 (404)
.|++.++.+++.. . ...+++|++|.++++. +... ..+ ..++.++.+.+..+ .++.. .. ...++++
T Consensus 245 ~L~l~~n~l~~~~--~-~~~~~~L~~L~l~~~~-l~~~--~~~-----~~~~~l~~l~~~~n-~l~~~--~~-~~~~~~l 309 (384)
T d2omza2 245 DLDLANNQISNLA--P-LSGLTKLTELKLGANQ-ISNI--SPL-----AGLTALTNLELNEN-QLEDI--SP-ISNLKNL 309 (384)
T ss_dssp EEECCSSCCCCCG--G-GTTCTTCSEEECCSSC-CCCC--GGG-----TTCTTCSEEECCSS-CCSCC--GG-GGGCTTC
T ss_pred hhccccCccCCCC--c-ccccccCCEeeccCcc-cCCC--Ccc-----cccccccccccccc-ccccc--cc-cchhccc
Confidence 9999998776422 2 2357899999998776 3321 112 35678889988875 44331 11 2457899
Q ss_pred ceEeecCCCCCCHHHHHHHHhhCCCcccCCCCcEEeccCCCCCCHHHHHhhhcCCCCcccEEecCCccccCCChHHHHHH
Q 015585 295 IDLCVRSCFYVTDASVEALARKQPDQEKSKQLRRLDLCNCIGLSVDSLRWVKRPSFRGLHWLGIGQTRLASKGNPVITEI 374 (404)
Q Consensus 295 ~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~~~i~~~~~~~l~~~~~~~L~~L~l~~~~l~~~~~~~~~~~ 374 (404)
+.|++++|. +++. ..+. .+++|++|++++| .++.. ..+. .+++|++|++++|.+++.. .+
T Consensus 310 ~~L~ls~n~-l~~l--~~l~-------~l~~L~~L~L~~n-~l~~l--~~l~--~l~~L~~L~l~~N~l~~l~-----~l 369 (384)
T d2omza2 310 TYLTLYFNN-ISDI--SPVS-------SLTKLQRLFFANN-KVSDV--SSLA--NLTNINWLSAGHNQISDLT-----PL 369 (384)
T ss_dssp SEEECCSSC-CSCC--GGGG-------GCTTCCEEECCSS-CCCCC--GGGG--GCTTCCEEECCSSCCCBCG-----GG
T ss_pred CeEECCCCC-CCCC--cccc-------cCCCCCEEECCCC-CCCCC--hhHc--CCCCCCEEECCCCcCCCCh-----hh
Confidence 999999884 6542 1233 5889999999996 66642 2344 4889999999999987541 23
Q ss_pred HhcCCccE-EEeccc
Q 015585 375 HNERPWLT-FCLDGC 388 (404)
Q Consensus 375 ~~~~~~l~-l~~~~~ 388 (404)
..+++++ +++++|
T Consensus 370 -~~l~~L~~L~L~~N 383 (384)
T d2omza2 370 -ANLTRITQLGLNDQ 383 (384)
T ss_dssp -TTCTTCSEEECCCE
T ss_pred -ccCCCCCEeeCCCC
Confidence 5678887 888776
No 8
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.43 E-value=4.6e-13 Score=120.88 Aligned_cols=293 Identities=22% Similarity=0.258 Sum_probs=188.0
Q ss_pred cccccCCCCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCC
Q 015585 10 TSSYYSSFNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNH 89 (404)
Q Consensus 10 ~~~~~~~~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 89 (404)
+..+..+++|++|+++++.+++.. .+ ..+++|++|++++|.. . .+..++.+++|+.|+++++....
T Consensus 59 l~gl~~L~nL~~L~Ls~N~l~~l~--~l-~~L~~L~~L~L~~n~i---------~--~i~~l~~l~~L~~L~~~~~~~~~ 124 (384)
T d2omza2 59 IDGVEYLNNLTQINFSNNQLTDIT--PL-KNLTKLVDILMNNNQI---------A--DITPLANLTNLTGLTLFNNQITD 124 (384)
T ss_dssp CTTGGGCTTCCEEECCSSCCCCCG--GG-TTCTTCCEEECCSSCC---------C--CCGGGTTCTTCCEEECCSSCCCC
T ss_pred ccccccCCCCCEEeCcCCcCCCCc--cc-cCCccccccccccccc---------c--ccccccccccccccccccccccc
Confidence 456788999999999998887643 24 4599999999999743 2 23457889999999997754221
Q ss_pred CCCccc----------------cChh----------------hHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCC
Q 015585 90 QGTFKR----------------VNDM----------------GMFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSL 137 (404)
Q Consensus 90 ~~~~~~----------------~~~~----------------~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L 137 (404)
...... .... .... ....+.........+.... ......++++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~ 199 (384)
T d2omza2 125 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKP-LANLTTLERLDISSNKVSD----ISVLAKLTNL 199 (384)
T ss_dssp CGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGG-GTTCTTCCEEECCSSCCCC----CGGGGGCTTC
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhh-hcccccccccccccccccc----cccccccccc
Confidence 100000 0000 0000 0001111111111111110 1124567899
Q ss_pred cEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCCCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEE
Q 015585 138 KKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCRLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALN 217 (404)
Q Consensus 138 ~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ 217 (404)
+.++++++. ++.. .. ...+++|+.|+++++. +.+ +..+..+++|+.|++.++ .+.. +..+..+++|++|+
T Consensus 200 ~~l~l~~n~-i~~~--~~-~~~~~~L~~L~l~~n~-l~~--~~~l~~l~~L~~L~l~~n-~l~~--~~~~~~~~~L~~L~ 269 (384)
T d2omza2 200 ESLIATNNQ-ISDI--TP-LGILTNLDELSLNGNQ-LKD--IGTLASLTNLTDLDLANN-QISN--LAPLSGLTKLTELK 269 (384)
T ss_dssp SEEECCSSC-CCCC--GG-GGGCTTCCEEECCSSC-CCC--CGGGGGCTTCSEEECCSS-CCCC--CGGGTTCTTCSEEE
T ss_pred ceeeccCCc-cCCC--Cc-ccccCCCCEEECCCCC-CCC--cchhhcccccchhccccC-ccCC--CCcccccccCCEee
Confidence 999999875 2221 11 2357899999999875 332 335668899999999985 4543 33467889999999
Q ss_pred ccCCccCHHHHHHHHhcCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHHHHHHHHhCCCCceE
Q 015585 218 LTGADITDSGLSILAQGNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDGILTIAAAGIGIIDL 297 (404)
Q Consensus 218 l~~~~l~~~~l~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~L~~L 297 (404)
++++.++.. .. ...++.++.+.+..+. +... ..+ ..++.++.|+++++ .+++.. . ...+++|++|
T Consensus 270 l~~~~l~~~--~~-~~~~~~l~~l~~~~n~-l~~~--~~~-----~~~~~l~~L~ls~n-~l~~l~--~-l~~l~~L~~L 334 (384)
T d2omza2 270 LGANQISNI--SP-LAGLTALTNLELNENQ-LEDI--SPI-----SNLKNLTYLTLYFN-NISDIS--P-VSSLTKLQRL 334 (384)
T ss_dssp CCSSCCCCC--GG-GTTCTTCSEEECCSSC-CSCC--GGG-----GGCTTCSEEECCSS-CCSCCG--G-GGGCTTCCEE
T ss_pred ccCcccCCC--Cc-cccccccccccccccc-cccc--ccc-----chhcccCeEECCCC-CCCCCc--c-cccCCCCCEE
Confidence 999877642 11 2357889999998776 4332 122 36789999999986 665421 1 3468999999
Q ss_pred eecCCCCCCHHHHHHHHhhCCCcccCCCCcEEeccCCCCCCHHHHHhhhcCCCCcccEEecCCc
Q 015585 298 CVRSCFYVTDASVEALARKQPDQEKSKQLRRLDLCNCIGLSVDSLRWVKRPSFRGLHWLGIGQT 361 (404)
Q Consensus 298 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~~~i~~~~~~~l~~~~~~~L~~L~l~~~ 361 (404)
++++|. +++. ..+. .+++|+.|++++| .++... .+. .+++|++|++++|
T Consensus 335 ~L~~n~-l~~l--~~l~-------~l~~L~~L~l~~N-~l~~l~--~l~--~l~~L~~L~L~~N 383 (384)
T d2omza2 335 FFANNK-VSDV--SSLA-------NLTNINWLSAGHN-QISDLT--PLA--NLTRITQLGLNDQ 383 (384)
T ss_dssp ECCSSC-CCCC--GGGG-------GCTTCCEEECCSS-CCCBCG--GGT--TCTTCSEEECCCE
T ss_pred ECCCCC-CCCC--hhHc-------CCCCCCEEECCCC-cCCCCh--hhc--cCCCCCEeeCCCC
Confidence 999995 6642 2344 5999999999985 676432 243 5899999999986
No 9
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.21 E-value=3.2e-12 Score=111.46 Aligned_cols=59 Identities=19% Similarity=0.082 Sum_probs=27.6
Q ss_pred CCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEeccc
Q 015585 17 FNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRC 85 (404)
Q Consensus 17 ~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 85 (404)
+++++|+|+++.++......+ ..+++|++|++++|. +.......+..+++|+.|+++++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f-~~l~~L~~L~l~~n~---------~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDF-KNLKNLHTLILINNK---------ISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTT-TTCTTCCEEECCSSC---------CCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCCEEECcCCcCCCcChhHh-hcccccccccccccc---------ccccchhhhhCCCccCEecccCC
Confidence 456666666555543211112 235566666666542 22222223445556666666553
No 10
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.17 E-value=3.3e-11 Score=100.02 Aligned_cols=204 Identities=19% Similarity=0.259 Sum_probs=123.5
Q ss_pred EEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCCCccccChhh
Q 015585 21 SLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQGTFKRVNDMG 100 (404)
Q Consensus 21 ~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 100 (404)
.+++..+.+++.. ... .+.+|++|++.+|. +++ ++.+..+++|+.|+++++.. ..+.+
T Consensus 23 ~~~l~~~~~~d~~--~~~-~l~~L~~L~l~~~~---------i~~--l~~l~~l~~L~~L~ls~n~i------~~~~~-- 80 (227)
T d1h6ua2 23 KIAAGKSNVTDTV--TQA-DLDGITTLSAFGTG---------VTT--IEGVQYLNNLIGLELKDNQI------TDLAP-- 80 (227)
T ss_dssp HHHTTCSSTTSEE--CHH-HHHTCCEEECTTSC---------CCC--CTTGGGCTTCCEEECCSSCC------CCCGG--
T ss_pred HHHhCCCCcCCcC--CHH-HcCCcCEEECCCCC---------CCc--chhHhcCCCCcEeecCCcee------ecccc--
Confidence 3455545554432 122 25678888888762 332 34467788888888877531 11211
Q ss_pred HHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCCCCCHHHHH
Q 015585 101 MFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCRLITSETVK 180 (404)
Q Consensus 101 l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~ 180 (404)
...+++|+.++++++. ++. +.. +..+++|+.++++++....... ....+.++.+.+.++.... ..
T Consensus 81 ----l~~l~~l~~l~~~~n~-~~~--i~~-l~~l~~L~~l~l~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~---~~ 145 (227)
T d1h6ua2 81 ----LKNLTKITELELSGNP-LKN--VSA-IAGLQSIKTLDLTSTQITDVTP----LAGLSNLQVLYLDLNQITN---IS 145 (227)
T ss_dssp ----GTTCCSCCEEECCSCC-CSC--CGG-GTTCTTCCEEECTTSCCCCCGG----GTTCTTCCEEECCSSCCCC---CG
T ss_pred ----cccccccccccccccc-ccc--ccc-ccccccccccccccccccccch----hccccchhhhhchhhhhch---hh
Confidence 2567788888887752 322 112 3456888888888775332221 2356778888887754322 12
Q ss_pred HhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCccCHHHHHHHHhcCCCcCEEeecCCCCCcHHHHHHHHhh
Q 015585 181 KLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADITDSGLSILAQGNLPIMNLCLRGCKRVTDKGISHLLCV 260 (404)
Q Consensus 181 ~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~ 260 (404)
.+..+++|+.|++.++ .+.+ ...+..+++|+.|++++|.+++. .. ...+++|++|++++|. +++.. .+
T Consensus 146 ~~~~~~~L~~L~l~~n-~~~~--~~~l~~l~~L~~L~Ls~n~l~~l--~~-l~~l~~L~~L~Ls~N~-lt~i~--~l--- 213 (227)
T d1h6ua2 146 PLAGLTNLQYLSIGNA-QVSD--LTPLANLSKLTTLKADDNKISDI--SP-LASLPNLIEVHLKNNQ-ISDVS--PL--- 213 (227)
T ss_dssp GGGGCTTCCEEECCSS-CCCC--CGGGTTCTTCCEEECCSSCCCCC--GG-GGGCTTCCEEECTTSC-CCBCG--GG---
T ss_pred hhcccccccccccccc-cccc--chhhcccccceecccCCCccCCC--hh-hcCCCCCCEEECcCCc-CCCCc--cc---
Confidence 3456788888888775 3332 23366788888888888877652 22 2357888899988885 65432 22
Q ss_pred cCCCCCCccEEecCC
Q 015585 261 GGTISQSLTTLDLGY 275 (404)
Q Consensus 261 ~~~~~~~L~~L~l~~ 275 (404)
..+++|+.|++++
T Consensus 214 --~~l~~L~~L~lsn 226 (227)
T d1h6ua2 214 --ANTSNLFIVTLTN 226 (227)
T ss_dssp --TTCTTCCEEEEEE
T ss_pred --ccCCCCCEEEeeC
Confidence 3678888888753
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=2.7e-11 Score=104.32 Aligned_cols=133 Identities=17% Similarity=0.060 Sum_probs=63.9
Q ss_pred HhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCCCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCC
Q 015585 132 LSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCRLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLR 211 (404)
Q Consensus 132 ~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~ 211 (404)
..+++|+.|+++++...... .......++|+.++++++. +.......++.+++|++|+++++ .+......++..++
T Consensus 102 ~~l~~L~~L~l~~n~~~~~~--~~~~~~~~~L~~l~l~~N~-l~~i~~~~f~~~~~L~~L~l~~N-~l~~l~~~~f~~l~ 177 (284)
T d1ozna_ 102 HGLGRLHTLHLDRCGLQELG--PGLFRGLAALQYLYLQDNA-LQALPDDTFRDLGNLTHLFLHGN-RISSVPERAFRGLH 177 (284)
T ss_dssp TTCTTCCEEECTTSCCCCCC--TTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSS-CCCEECTTTTTTCT
T ss_pred cccccCCEEecCCccccccc--ccccchhcccchhhhcccc-ccccChhHhccccchhhcccccC-cccccchhhhcccc
Confidence 34456666666555311000 0112244556666665543 22211122345566666666663 44433334445566
Q ss_pred CCCEEEccCCccCHHHHHHHHhcCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCC
Q 015585 212 KLTALNLTGADITDSGLSILAQGNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGY 275 (404)
Q Consensus 212 ~L~~L~l~~~~l~~~~l~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~ 275 (404)
+|+.+++.+|.++...... ...+++|++|+++++. +.......+ ..+++|++|++++
T Consensus 178 ~L~~l~l~~N~l~~i~~~~-f~~l~~L~~L~l~~N~-i~~~~~~~~-----~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 178 SLDRLLLHQNRVAHVHPHA-FRDLGRLMTLYLFANN-LSALPTEAL-----APLRALQYLRLND 234 (284)
T ss_dssp TCCEEECCSSCCCEECTTT-TTTCTTCCEEECCSSC-CSCCCHHHH-----TTCTTCCEEECCS
T ss_pred ccchhhhhhccccccChhH-hhhhhhcccccccccc-ccccccccc-----ccccccCEEEecC
Confidence 6666666666554322111 2245666666666655 333222222 2456667777665
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=2.5e-12 Score=110.91 Aligned_cols=208 Identities=16% Similarity=0.092 Sum_probs=118.5
Q ss_pred CCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCCCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCC
Q 015585 135 HSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCRLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLT 214 (404)
Q Consensus 135 ~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~ 214 (404)
+++++|+++++. ++.-.- ..+..++.|+.|+++++. +..........+..++.+.+.....+.......++.+++|+
T Consensus 32 ~~~~~L~Ls~N~-i~~i~~-~~f~~l~~L~~L~ls~n~-l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~ 108 (284)
T d1ozna_ 32 AASQRIFLHGNR-ISHVPA-ASFRACRNLTILWLHSNV-LARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLH 108 (284)
T ss_dssp TTCSEEECTTSC-CCEECT-TTTTTCTTCCEEECCSSC-CCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCC
T ss_pred CCCCEEECcCCc-CCCCCH-HHhhcccccccccccccc-ccccccccccccccccccccccccccccccchhhcccccCC
Confidence 467888888875 332111 123466788888887754 33222223345677777776654555554455567778888
Q ss_pred EEEccCCccCHHHHHHHHhcCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHHHHHHHHhCCCC
Q 015585 215 ALNLTGADITDSGLSILAQGNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDGILTIAAAGIGI 294 (404)
Q Consensus 215 ~L~l~~~~l~~~~l~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~L 294 (404)
+|+++.+.+...... .....++|+.+++.++. ++......+ ..+++|++|+++++ .++...... ...+++|
T Consensus 109 ~L~l~~n~~~~~~~~-~~~~~~~L~~l~l~~N~-l~~i~~~~f-----~~~~~L~~L~l~~N-~l~~l~~~~-f~~l~~L 179 (284)
T d1ozna_ 109 TLHLDRCGLQELGPG-LFRGLAALQYLYLQDNA-LQALPDDTF-----RDLGNLTHLFLHGN-RISSVPERA-FRGLHSL 179 (284)
T ss_dssp EEECTTSCCCCCCTT-TTTTCTTCCEEECCSSC-CCCCCTTTT-----TTCTTCCEEECCSS-CCCEECTTT-TTTCTTC
T ss_pred EEecCCccccccccc-ccchhcccchhhhcccc-ccccChhHh-----ccccchhhcccccC-cccccchhh-hcccccc
Confidence 888888765432211 12245678888887765 332211111 34567788887775 443211111 1245777
Q ss_pred ceEeecCCCCCCHHHHHHHHhhCCCcccCCCCcEEeccCCCCCCHHHHHhhhcCCCCcccEEecCCccccC
Q 015585 295 IDLCVRSCFYVTDASVEALARKQPDQEKSKQLRRLDLCNCIGLSVDSLRWVKRPSFRGLHWLGIGQTRLAS 365 (404)
Q Consensus 295 ~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~~~i~~~~~~~l~~~~~~~L~~L~l~~~~l~~ 365 (404)
+.+.+.+|. ++...-..+. ++++|+.|+++++ .++......+. .+++|+.|++++|+++-
T Consensus 180 ~~l~l~~N~-l~~i~~~~f~-------~l~~L~~L~l~~N-~i~~~~~~~~~--~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 180 DRLLLHQNR-VAHVHPHAFR-------DLGRLMTLYLFAN-NLSALPTEALA--PLRALQYLRLNDNPWVC 239 (284)
T ss_dssp CEEECCSSC-CCEECTTTTT-------TCTTCCEEECCSS-CCSCCCHHHHT--TCTTCCEEECCSSCEEC
T ss_pred chhhhhhcc-ccccChhHhh-------hhhhccccccccc-ccccccccccc--cccccCEEEecCCCCCC
Confidence 777777764 4322112222 4677777777773 55544444443 36777777777777653
No 13
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=5.3e-12 Score=107.68 Aligned_cols=58 Identities=17% Similarity=0.178 Sum_probs=26.9
Q ss_pred CccEEEccCCCCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCcc
Q 015585 162 ALVEVRLLWCRLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADI 223 (404)
Q Consensus 162 ~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l 223 (404)
+++.|+++++. +.......+..+++|++|+++++ .++. +..++.+++|+.|++++|.+
T Consensus 32 ~l~~L~Ls~N~-i~~l~~~~f~~l~~L~~L~L~~N-~l~~--l~~~~~l~~L~~L~Ls~N~l 89 (266)
T d1p9ag_ 32 DTTILHLSENL-LYTFSLATLMPYTRLTQLNLDRA-ELTK--LQVDGTLPVLGTLDLSHNQL 89 (266)
T ss_dssp TCCEEECTTSC-CSEEEGGGGTTCTTCCEEECTTS-CCCE--EECCSCCTTCCEEECCSSCC
T ss_pred CCCEEECcCCc-CCCcCHHHhhccccccccccccc-cccc--cccccccccccccccccccc
Confidence 45566665543 32212223345555566655553 3332 22233455555555555544
No 14
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.03 E-value=5.7e-10 Score=90.28 Aligned_cols=161 Identities=14% Similarity=0.200 Sum_probs=100.8
Q ss_pred CCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCCCccccChhhHHHHHhcCCCCcEEEcCCCC
Q 015585 41 LPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQGTFKRVNDMGMFLLSEGCKGLESVRLGGFS 120 (404)
Q Consensus 41 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~ 120 (404)
++++++|++.++. +++ +..+..+++|++|+++++. +..+.+ ...+++|+.|+++++.
T Consensus 39 l~~l~~L~l~~~~---------i~~--l~~l~~l~nL~~L~Ls~N~------l~~~~~------l~~l~~L~~L~l~~n~ 95 (199)
T d2omxa2 39 LDQVTTLQADRLG---------IKS--IDGVEYLNNLTQINFSNNQ------LTDITP------LKNLTKLVDILMNNNQ 95 (199)
T ss_dssp HTTCCEEECTTSC---------CCC--CTTGGGCTTCCEEECCSSC------CCCCGG------GTTCTTCCEEECCSSC
T ss_pred hcCCCEEECCCCC---------CCC--ccccccCCCcCcCcccccc------ccCccc------ccCCcccccccccccc
Confidence 5678888888753 222 2345677788888887753 111211 2467788888887753
Q ss_pred CCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCCCCCHHHHHHhhCCCCCCEEeccCCCCCC
Q 015585 121 KVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCRLITSETVKKLASSRNLEVLDLGGCKSIA 200 (404)
Q Consensus 121 ~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 200 (404)
.....+ +..+++|+.|+++++....... ...+++|+.|+++++. +.. +..+..+++|++|++.++ .++
T Consensus 96 ~~~~~~----l~~l~~L~~L~l~~~~~~~~~~----~~~l~~L~~L~l~~n~-l~~--~~~l~~~~~L~~L~l~~n-~l~ 163 (199)
T d2omxa2 96 IADITP----LANLTNLTGLTLFNNQITDIDP----LKNLTNLNRLELSSNT-ISD--ISALSGLTSLQQLNFSSN-QVT 163 (199)
T ss_dssp CCCCGG----GTTCTTCSEEECCSSCCCCCGG----GTTCTTCSEEECCSSC-CCC--CGGGTTCTTCSEEECCSS-CCC
T ss_pred cccccc----cccccccccccccccccccccc----cchhhhhHHhhhhhhh-hcc--cccccccccccccccccc-ccc
Confidence 322221 4566888888888775433222 3467888888888764 322 334667888888888874 444
Q ss_pred hHHHHhhhCCCCCCEEEccCCccCHHHHHHHHhcCCCcCEE
Q 015585 201 DTCLRSISCLRKLTALNLTGADITDSGLSILAQGNLPIMNL 241 (404)
Q Consensus 201 ~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~~~~~~L~~L 241 (404)
+ +..+..+++|++|++++|++++- ..+ ..+++|++|
T Consensus 164 ~--l~~l~~l~~L~~L~ls~N~i~~i--~~l-~~L~~L~~L 199 (199)
T d2omxa2 164 D--LKPLANLTTLERLDISSNKVSDI--SVL-AKLTNLESL 199 (199)
T ss_dssp C--CGGGTTCTTCCEEECCSSCCCCC--GGG-GGCTTCSEE
T ss_pred C--CccccCCCCCCEEECCCCCCCCC--ccc-cCCCCCCcC
Confidence 3 34467788888888888877752 222 246777765
No 15
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.02 E-value=5e-10 Score=90.64 Aligned_cols=162 Identities=20% Similarity=0.254 Sum_probs=94.3
Q ss_pred CCCCCceEEecccccCCCCCccccChhhHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCHHH
Q 015585 73 SCHHLTGLSLTRCRHNHQGTFKRVNDMGMFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSASFLSDLA 152 (404)
Q Consensus 73 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~ 152 (404)
.++++++|+++++. +..+.. + ..+++|+.|+++++ .+++. .. +..+++|+.|+++++.......
T Consensus 38 ~l~~l~~L~l~~~~------i~~l~~--l----~~l~nL~~L~Ls~N-~l~~~--~~-l~~l~~L~~L~l~~n~~~~~~~ 101 (199)
T d2omxa2 38 DLDQVTTLQADRLG------IKSIDG--V----EYLNNLTQINFSNN-QLTDI--TP-LKNLTKLVDILMNNNQIADITP 101 (199)
T ss_dssp HHTTCCEEECTTSC------CCCCTT--G----GGCTTCCEEECCSS-CCCCC--GG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred HhcCCCEEECCCCC------CCCccc--c----ccCCCcCcCccccc-cccCc--cc-ccCCcccccccccccccccccc
Confidence 45677777777653 122211 1 45677888888775 44332 11 4566778888887775322221
Q ss_pred HHHHHcCCCCccEEEccCCCCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCccCHHHHHHHH
Q 015585 153 FHDLTGVPCALVEVRLLWCRLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADITDSGLSILA 232 (404)
Q Consensus 153 l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~ 232 (404)
...++.|+.|+++++.... +..+..+++|+.|+++++ .+.. +..+..+++|+.|++.+|.+++- .. .
T Consensus 102 ----l~~l~~L~~L~l~~~~~~~---~~~~~~l~~L~~L~l~~n-~l~~--~~~l~~~~~L~~L~l~~n~l~~l--~~-l 168 (199)
T d2omxa2 102 ----LANLTNLTGLTLFNNQITD---IDPLKNLTNLNRLELSSN-TISD--ISALSGLTSLQQLNFSSNQVTDL--KP-L 168 (199)
T ss_dssp ----GTTCTTCSEEECCSSCCCC---CGGGTTCTTCSEEECCSS-CCCC--CGGGTTCTTCSEEECCSSCCCCC--GG-G
T ss_pred ----ccccccccccccccccccc---ccccchhhhhHHhhhhhh-hhcc--cccccccccccccccccccccCC--cc-c
Confidence 3466777888777765332 223456777888887774 3432 33456677788888877766542 12 2
Q ss_pred hcCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEE
Q 015585 233 QGNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTL 271 (404)
Q Consensus 233 ~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L 271 (404)
..+++|++|++++|. +++. ..+. .+++|++|
T Consensus 169 ~~l~~L~~L~ls~N~-i~~i--~~l~-----~L~~L~~L 199 (199)
T d2omxa2 169 ANLTTLERLDISSNK-VSDI--SVLA-----KLTNLESL 199 (199)
T ss_dssp TTCTTCCEEECCSSC-CCCC--GGGG-----GCTTCSEE
T ss_pred cCCCCCCEEECCCCC-CCCC--cccc-----CCCCCCcC
Confidence 356778888887775 5542 2222 45566654
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.99 E-value=1.6e-09 Score=89.54 Aligned_cols=191 Identities=17% Similarity=0.185 Sum_probs=136.0
Q ss_pred cccCCCCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCC
Q 015585 12 SYYSSFNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQG 91 (404)
Q Consensus 12 ~~~~~~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~ 91 (404)
....+.+|++|++.++.+++ +..+ ..+++|++|++++|. ++ .+..+..+++|+.++++++..
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~--l~~l-~~l~~L~~L~ls~n~---------i~--~~~~l~~l~~l~~l~~~~n~~---- 97 (227)
T d1h6ua2 36 TQADLDGITTLSAFGTGVTT--IEGV-QYLNNLIGLELKDNQ---------IT--DLAPLKNLTKITELELSGNPL---- 97 (227)
T ss_dssp CHHHHHTCCEEECTTSCCCC--CTTG-GGCTTCCEEECCSSC---------CC--CCGGGTTCCSCCEEECCSCCC----
T ss_pred CHHHcCCcCEEECCCCCCCc--chhH-hcCCCCcEeecCCce---------ee--ccccccccccccccccccccc----
Confidence 35667899999999988874 2444 459999999999973 32 233478899999999987631
Q ss_pred CccccChhhHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCC
Q 015585 92 TFKRVNDMGMFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWC 171 (404)
Q Consensus 92 ~~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~ 171 (404)
..+.. ...+++|+.+.++++....... ....+.++.+.+..+....... ...+++|+.|.+.++
T Consensus 98 --~~i~~------l~~l~~L~~l~l~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~----~~~~~~L~~L~l~~n 161 (227)
T d1h6ua2 98 --KNVSA------IAGLQSIKTLDLTSTQITDVTP----LAGLSNLQVLYLDLNQITNISP----LAGLTNLQYLSIGNA 161 (227)
T ss_dssp --SCCGG------GTTCTTCCEEECTTSCCCCCGG----GTTCTTCCEEECCSSCCCCCGG----GGGCTTCCEEECCSS
T ss_pred --ccccc------ccccccccccccccccccccch----hccccchhhhhchhhhhchhhh----hcccccccccccccc
Confidence 22221 1468899999998864433222 3345888999998875322222 236789999999987
Q ss_pred CCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCccCHHHHHHHHhcCCCcCEEeecC
Q 015585 172 RLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADITDSGLSILAQGNLPIMNLCLRG 245 (404)
Q Consensus 172 ~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~~~~~~L~~L~l~~ 245 (404)
.... ...+.++++|++|+++++ .+.+ +..++.+++|++|++++|++++-. . ...+++|+.|++++
T Consensus 162 ~~~~---~~~l~~l~~L~~L~Ls~n-~l~~--l~~l~~l~~L~~L~Ls~N~lt~i~--~-l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 162 QVSD---LTPLANLSKLTTLKADDN-KISD--ISPLASLPNLIEVHLKNNQISDVS--P-LANTSNLFIVTLTN 226 (227)
T ss_dssp CCCC---CGGGTTCTTCCEEECCSS-CCCC--CGGGGGCTTCCEEECTTSCCCBCG--G-GTTCTTCCEEEEEE
T ss_pred cccc---chhhcccccceecccCCC-ccCC--ChhhcCCCCCCEEECcCCcCCCCc--c-cccCCCCCEEEeeC
Confidence 5322 224678999999999985 5654 445788999999999999887532 2 34689999999863
No 17
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.99 E-value=1.9e-10 Score=100.01 Aligned_cols=204 Identities=19% Similarity=0.151 Sum_probs=115.3
Q ss_pred cccCCCCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCC
Q 015585 12 SYYSSFNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQG 91 (404)
Q Consensus 12 ~~~~~~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~ 91 (404)
.+..+++|++|+++++.+.......+ ..+++|++|++++|... .+. -...+.++.|++.++.
T Consensus 50 ~f~~l~~L~~L~l~~n~~~~i~~~~f-~~l~~L~~L~l~~n~l~------~l~------~~~~~~l~~L~~~~n~----- 111 (305)
T d1xkua_ 50 DFKNLKNLHTLILINNKISKISPGAF-APLVKLERLYLSKNQLK------ELP------EKMPKTLQELRVHENE----- 111 (305)
T ss_dssp TTTTCTTCCEEECCSSCCCCBCTTTT-TTCTTCCEEECCSSCCS------BCC------SSCCTTCCEEECCSSC-----
T ss_pred Hhhccccccccccccccccccchhhh-hCCCccCEecccCCccC------cCc------cchhhhhhhhhccccc-----
Confidence 57889999999999877764433333 35899999999997321 111 1234577888876632
Q ss_pred CccccChhhHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCC
Q 015585 92 TFKRVNDMGMFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWC 171 (404)
Q Consensus 92 ~~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~ 171 (404)
+..+.... ......+..+....+...........+..+++|+.+++.++.. .... ...+++|+.|++.++
T Consensus 112 -l~~l~~~~----~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l-~~l~----~~~~~~L~~L~l~~n 181 (305)
T d1xkua_ 112 -ITKVRKSV----FNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI-TTIP----QGLPPSLTELHLDGN 181 (305)
T ss_dssp -CCBBCHHH----HTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC-CSCC----SSCCTTCSEEECTTS
T ss_pred -hhhhhhhh----hhccccccccccccccccccCCCccccccccccCccccccCCc-cccC----cccCCccCEEECCCC
Confidence 22233222 2345667777776532221111122245567788888877642 1100 113467777777765
Q ss_pred CCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCccCHHHHHHHHhcCCCcCEEeecCCC
Q 015585 172 RLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADITDSGLSILAQGNLPIMNLCLRGCK 247 (404)
Q Consensus 172 ~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~~~~~~L~~L~l~~~~ 247 (404)
.. .......+..++.+++|+++++ .+.......+..+++|++|++++|.++.- ..-...+++|++|+++++.
T Consensus 182 ~~-~~~~~~~~~~~~~l~~L~~s~n-~l~~~~~~~~~~l~~L~~L~L~~N~L~~l--p~~l~~l~~L~~L~Ls~N~ 253 (305)
T d1xkua_ 182 KI-TKVDAASLKGLNNLAKLGLSFN-SISAVDNGSLANTPHLRELHLNNNKLVKV--PGGLADHKYIQVVYLHNNN 253 (305)
T ss_dssp CC-CEECTGGGTTCTTCCEEECCSS-CCCEECTTTGGGSTTCCEEECCSSCCSSC--CTTTTTCSSCCEEECCSSC
T ss_pred cC-CCCChhHhhccccccccccccc-cccccccccccccccceeeeccccccccc--ccccccccCCCEEECCCCc
Confidence 42 2222234456677777777763 55544444556667777777777655421 1111235666666666654
No 18
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99 E-value=6.8e-11 Score=100.63 Aligned_cols=201 Identities=16% Similarity=0.064 Sum_probs=100.8
Q ss_pred ccCCCCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCCC
Q 015585 13 YYSSFNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQGT 92 (404)
Q Consensus 13 ~~~~~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~ 92 (404)
......+.+++.+++.++. .+..+ -+++++|+|++| .++......+..+++|++|+++++.
T Consensus 6 ~~~~~~~~~v~C~~~~L~~-iP~~l---p~~l~~L~Ls~N---------~i~~l~~~~f~~l~~L~~L~L~~N~------ 66 (266)
T d1p9ag_ 6 VSKVASHLEVNCDKRNLTA-LPPDL---PKDTTILHLSEN---------LLYTFSLATLMPYTRLTQLNLDRAE------ 66 (266)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCC---CTTCCEEECTTS---------CCSEEEGGGGTTCTTCCEEECTTSC------
T ss_pred EcccCCCeEEEccCCCCCe-eCcCc---CcCCCEEECcCC---------cCCCcCHHHhhcccccccccccccc------
Confidence 3444555666776666552 12111 147888888886 3443333456778888888887753
Q ss_pred ccccChhhHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCC
Q 015585 93 FKRVNDMGMFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCR 172 (404)
Q Consensus 93 ~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 172 (404)
+..+... ..+++|+.|+++++ .++.. ...+..+++|+.|+++++...... ......++.++.|.+.++.
T Consensus 67 l~~l~~~------~~l~~L~~L~Ls~N-~l~~~--~~~~~~l~~L~~L~l~~~~~~~~~--~~~~~~l~~l~~L~l~~n~ 135 (266)
T d1p9ag_ 67 LTKLQVD------GTLPVLGTLDLSHN-QLQSL--PLLGQTLPALTVLDVSFNRLTSLP--LGALRGLGELQELYLKGNE 135 (266)
T ss_dssp CCEEECC------SCCTTCCEEECCSS-CCSSC--CCCTTTCTTCCEEECCSSCCCCCC--SSTTTTCTTCCEEECTTSC
T ss_pred ccccccc------cccccccccccccc-ccccc--ccccccccccccccccccccceee--ccccccccccccccccccc
Confidence 1122111 34677788887774 33211 112345567777777666321100 0112244566666666543
Q ss_pred CCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCccCHHHHHHHHhcCCCcCEEeecCCC
Q 015585 173 LITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADITDSGLSILAQGNLPIMNLCLRGCK 247 (404)
Q Consensus 173 ~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~~~~~~L~~L~l~~~~ 247 (404)
+.......+..++.|+.++++++ .+.......+..+++|++|++++|+++.- ...+. ..++|+.|.+++++
T Consensus 136 -l~~l~~~~~~~l~~l~~l~l~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~L~~l-p~~~~-~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 136 -LKTLPPGLLTPTPKLEKLSLANN-NLTELPAGLLNGLENLDTLLLQENSLYTI-PKGFF-GSHLLPFAFLHGNP 206 (266)
T ss_dssp -CCCCCTTTTTTCTTCCEEECTTS-CCSCCCTTTTTTCTTCCEEECCSSCCCCC-CTTTT-TTCCCSEEECCSCC
T ss_pred -cceeccccccccccchhcccccc-cccccCccccccccccceeecccCCCccc-ChhHC-CCCCCCEEEecCCC
Confidence 22111112234566666666663 44443334445566666666666654421 00011 24455555555544
No 19
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.97 E-value=3.9e-09 Score=82.47 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=98.0
Q ss_pred HHHHHHHhcCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHHHHHHH---HhCCCCceEeecCC
Q 015585 226 SGLSILAQGNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDGILTIA---AAGIGIIDLCVRSC 302 (404)
Q Consensus 226 ~~l~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~---~~~~~L~~L~l~~~ 302 (404)
..+..+....++|++|+++++..++++++..++... ...+.|++|+++++ .+++.+...++ ...+.|++|++++|
T Consensus 5 ~~l~~l~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L-~~n~~L~~L~Ls~n-~l~~~~~~~la~~L~~n~~L~~L~L~~n 82 (167)
T d1pgva_ 5 SCINRLREDDTDLKEVNINNMKRVSKERIRSLIEAA-CNSKHIEKFSLANT-AISDSEARGLIELIETSPSLRVLNVESN 82 (167)
T ss_dssp HHHHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHH-TTCSCCCEEECTTS-CCBHHHHTTHHHHHHHCSSCCEEECCSS
T ss_pred HHHHHHHhCCCCCcEEEeCCCCCCCHHHHHHHHHHH-hhCCccceeecccc-ccchhHHHHHhhhhhhcccccceeeehh
Confidence 346666667899999999887668888776654211 34578999999986 78887655443 34688999999999
Q ss_pred CCCCHHHHHHHHhhCCCcccCCCCcEEeccCC--CCCCHHHHHhhh--cCCCCcccEEecCCccc
Q 015585 303 FYVTDASVEALARKQPDQEKSKQLRRLDLCNC--IGLSVDSLRWVK--RPSFRGLHWLGIGQTRL 363 (404)
Q Consensus 303 ~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~--~~i~~~~~~~l~--~~~~~~L~~L~l~~~~l 363 (404)
.+++.++..++..+. .+++|+.|++.++ ..++..+...+. ....++|+.|+++.+..
T Consensus 83 -~i~~~g~~~l~~aL~---~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 83 -FLTPELLARLLRSTL---VTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp -BCCHHHHHHHHHHTT---TTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred -hcchHHHHHHHHHHH---hCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 499999999998888 7899999999874 245565554443 12478999999887653
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.95 E-value=1.4e-09 Score=88.62 Aligned_cols=164 Identities=22% Similarity=0.202 Sum_probs=103.8
Q ss_pred CCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCCCccccChhhHHHHHhcCCCCcEEEcCCCC
Q 015585 41 LPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQGTFKRVNDMGMFLLSEGCKGLESVRLGGFS 120 (404)
Q Consensus 41 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~ 120 (404)
+.+|++|++.+|. ++. +..+..+++|++|+++++. +..+.. ...+++|+.|+++++
T Consensus 45 L~~L~~L~l~~~~---------i~~--l~~l~~l~~L~~L~L~~n~------i~~l~~------~~~l~~L~~L~l~~n- 100 (210)
T d1h6ta2 45 LNSIDQIIANNSD---------IKS--VQGIQYLPNVTKLFLNGNK------LTDIKP------LANLKNLGWLFLDEN- 100 (210)
T ss_dssp HHTCCEEECTTSC---------CCC--CTTGGGCTTCCEEECCSSC------CCCCGG------GTTCTTCCEEECCSS-
T ss_pred hcCccEEECcCCC---------CCC--chhHhhCCCCCEEeCCCcc------ccCccc------cccCccccccccccc-
Confidence 4477888888763 221 2335677888888887753 122221 145778888888874
Q ss_pred CCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCCCCCHHHHHHhhCCCCCCEEeccCCCCCC
Q 015585 121 KVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCRLITSETVKKLASSRNLEVLDLGGCKSIA 200 (404)
Q Consensus 121 ~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 200 (404)
.+++ +.. +..+++|+.|++.++....... ...++.++.+.++++. +.+ ......+++|++++++++ .+.
T Consensus 101 ~i~~--l~~-l~~l~~L~~L~l~~~~~~~~~~----l~~l~~l~~l~~~~n~-l~~--~~~~~~l~~L~~l~l~~n-~l~ 169 (210)
T d1h6ta2 101 KVKD--LSS-LKDLKKLKSLSLEHNGISDING----LVHLPQLESLYLGNNK-ITD--ITVLSRLTKLDTLSLEDN-QIS 169 (210)
T ss_dssp CCCC--GGG-GTTCTTCCEEECTTSCCCCCGG----GGGCTTCCEEECCSSC-CCC--CGGGGGCTTCSEEECCSS-CCC
T ss_pred cccc--ccc-cccccccccccccccccccccc----cccccccccccccccc-ccc--cccccccccccccccccc-ccc
Confidence 4443 222 4556888888888775322221 3366788888887764 332 223556788888888874 454
Q ss_pred hHHHHhhhCCCCCCEEEccCCccCHHHHHHHHhcCCCcCEEeec
Q 015585 201 DTCLRSISCLRKLTALNLTGADITDSGLSILAQGNLPIMNLCLR 244 (404)
Q Consensus 201 ~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~~~~~~L~~L~l~ 244 (404)
+ +..++.+++|+.|++++|.+++- ..+ ..+++|++|+++
T Consensus 170 ~--i~~l~~l~~L~~L~Ls~N~i~~l--~~l-~~l~~L~~L~Ls 208 (210)
T d1h6ta2 170 D--IVPLAGLTKLQNLYLSKNHISDL--RAL-AGLKNLDVLELF 208 (210)
T ss_dssp C--CGGGTTCTTCCEEECCSSCCCBC--GGG-TTCTTCSEEEEE
T ss_pred c--cccccCCCCCCEEECCCCCCCCC--hhh-cCCCCCCEEEcc
Confidence 3 34467788888888888877652 222 357888888875
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.89 E-value=3.7e-09 Score=86.11 Aligned_cols=164 Identities=23% Similarity=0.241 Sum_probs=101.2
Q ss_pred CCCCceEEecccccCCCCCccccChhhHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHH
Q 015585 74 CHHLTGLSLTRCRHNHQGTFKRVNDMGMFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSASFLSDLAF 153 (404)
Q Consensus 74 ~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l 153 (404)
+.+|+.|+++++.. ..+. + ...+++|++|+++++ .+++. .. +..+++|+.|+++++. ++. +
T Consensus 45 L~~L~~L~l~~~~i------~~l~--~----l~~l~~L~~L~L~~n-~i~~l--~~-~~~l~~L~~L~l~~n~-i~~--l 105 (210)
T d1h6ta2 45 LNSIDQIIANNSDI------KSVQ--G----IQYLPNVTKLFLNGN-KLTDI--KP-LANLKNLGWLFLDENK-VKD--L 105 (210)
T ss_dssp HHTCCEEECTTSCC------CCCT--T----GGGCTTCCEEECCSS-CCCCC--GG-GTTCTTCCEEECCSSC-CCC--G
T ss_pred hcCccEEECcCCCC------CCch--h----HhhCCCCCEEeCCCc-cccCc--cc-cccCcccccccccccc-ccc--c
Confidence 45677888877531 1221 1 146788888888875 44432 12 3457788888888775 332 2
Q ss_pred HHHHcCCCCccEEEccCCCCCCHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCccCHHHHHHHHh
Q 015585 154 HDLTGVPCALVEVRLLWCRLITSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADITDSGLSILAQ 233 (404)
Q Consensus 154 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~~ 233 (404)
.. ...+++|+.|++.++.... +..+..++.++.+.+.++ .+.+ ...+..+++|+.++++++.+++. .. ..
T Consensus 106 ~~-l~~l~~L~~L~l~~~~~~~---~~~l~~l~~l~~l~~~~n-~l~~--~~~~~~l~~L~~l~l~~n~l~~i--~~-l~ 175 (210)
T d1h6ta2 106 SS-LKDLKKLKSLSLEHNGISD---INGLVHLPQLESLYLGNN-KITD--ITVLSRLTKLDTLSLEDNQISDI--VP-LA 175 (210)
T ss_dssp GG-GTTCTTCCEEECTTSCCCC---CGGGGGCTTCCEEECCSS-CCCC--CGGGGGCTTCSEEECCSSCCCCC--GG-GT
T ss_pred cc-ccccccccccccccccccc---cccccccccccccccccc-cccc--ccccccccccccccccccccccc--cc-cc
Confidence 22 3457788888887765322 234567778888888774 4443 23345678888888888876642 22 23
Q ss_pred cCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecC
Q 015585 234 GNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLG 274 (404)
Q Consensus 234 ~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~ 274 (404)
.+++|++|++++|. +++. ..+ ..+++|++|+++
T Consensus 176 ~l~~L~~L~Ls~N~-i~~l--~~l-----~~l~~L~~L~Ls 208 (210)
T d1h6ta2 176 GLTKLQNLYLSKNH-ISDL--RAL-----AGLKNLDVLELF 208 (210)
T ss_dssp TCTTCCEEECCSSC-CCBC--GGG-----TTCTTCSEEEEE
T ss_pred CCCCCCEEECCCCC-CCCC--hhh-----cCCCCCCEEEcc
Confidence 57788888888775 5542 223 357788888875
No 22
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.88 E-value=2.1e-08 Score=78.18 Aligned_cols=119 Identities=12% Similarity=0.132 Sum_probs=72.6
Q ss_pred CCCCCCEEEccCC-ccCHHHHHHHHh---cCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHHH
Q 015585 209 CLRKLTALNLTGA-DITDSGLSILAQ---GNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDGI 284 (404)
Q Consensus 209 ~~~~L~~L~l~~~-~l~~~~l~~l~~---~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~ 284 (404)
..++|++|+++++ .++++++..++. ..++|++|++++|. +++.+...++.. -...+.|++|+++++ .+++.++
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~-l~~~~~~~la~~-L~~n~~L~~L~L~~n-~i~~~g~ 89 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTA-ISDSEARGLIEL-IETSPSLRVLNVESN-FLTPELL 89 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSC-CBHHHHTTHHHH-HHHCSSCCEEECCSS-BCCHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccc-cchhHHHHHhhh-hhhcccccceeeehh-hcchHHH
Confidence 4567777777753 577766665554 34567777777765 666554433210 023456777777775 6777776
Q ss_pred HHHHHhC---CCCceEeecCCC--CCCHHHHHHHHhhCCCcccCCCCcEEeccC
Q 015585 285 LTIAAAG---IGIIDLCVRSCF--YVTDASVEALARKQPDQEKSKQLRRLDLCN 333 (404)
Q Consensus 285 ~~l~~~~---~~L~~L~l~~~~--~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~ 333 (404)
..+++.+ +.|++|+++++. .+++.+...++..+. .+++|+.|+++.
T Consensus 90 ~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~---~n~sL~~l~l~~ 140 (167)
T d1pgva_ 90 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIE---ENESLLRVGISF 140 (167)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHH---HCSSCCEEECCC
T ss_pred HHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHH---hCCCccEeeCcC
Confidence 6665443 557777776552 355666555555444 567777777755
No 23
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.88 E-value=5.4e-13 Score=116.94 Aligned_cols=63 Identities=19% Similarity=0.134 Sum_probs=31.1
Q ss_pred CCCCcEEeccCCCCCCHHHHHhhhcCCCCcccEEecCCccccCCChHHHHHHHhcCCccE-EEecccccccc
Q 015585 323 SKQLRRLDLCNCIGLSVDSLRWVKRPSFRGLHWLGIGQTRLASKGNPVITEIHNERPWLT-FCLDGCEIGCH 393 (404)
Q Consensus 323 ~~~L~~L~l~~~~~i~~~~~~~l~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~l~-l~~~~~~~~~~ 393 (404)
+++|+.|+++++ +++......+. .+++|++|++++|.+++.-. .+ ..+..++ +++.+|.+=|.
T Consensus 243 ~~~L~~L~Ls~N-~l~g~iP~~l~--~L~~L~~L~Ls~N~l~g~iP----~~-~~L~~L~~l~l~~N~~l~g 306 (313)
T d1ogqa_ 243 SKNLNGLDLRNN-RIYGTLPQGLT--QLKFLHSLNVSFNNLCGEIP----QG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CTTCCEEECCSS-CCEECCCGGGG--GCTTCCEEECCSSEEEEECC----CS-TTGGGSCGGGTCSSSEEES
T ss_pred ccccccccCccC-eecccCChHHh--CCCCCCEEECcCCcccccCC----Cc-ccCCCCCHHHhCCCccccC
Confidence 566666666663 44422222333 35667777777666652101 01 2334454 55555554443
No 24
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.87 E-value=5.2e-11 Score=104.01 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=27.8
Q ss_pred CCcEEeccCCCCChH--HHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEeccc
Q 015585 18 NLRSLSLVLDVITDE--LLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRC 85 (404)
Q Consensus 18 ~L~~L~L~~~~~~~~--~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 85 (404)
++++|+|+++.+... .+..+. .+++|++|+++++. .++......++++++|++|+++++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~-~L~~L~~L~Ls~~N--------~l~g~iP~~i~~L~~L~~L~Ls~N 111 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLA-NLPYLNFLYIGGIN--------NLVGPIPPAIAKLTQLHYLYITHT 111 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGG-GCTTCSEEEEEEET--------TEESCCCGGGGGCTTCSEEEEEEE
T ss_pred EEEEEECCCCCCCCCCCCChHHh-cCcccccccccccc--------ccccccccccccccccchhhhccc
Confidence 456666665444321 122232 36666666665421 122222234555666666666554
No 25
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.80 E-value=2.1e-08 Score=78.25 Aligned_cols=132 Identities=13% Similarity=0.063 Sum_probs=101.2
Q ss_pred HHHHHHHhcCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHHHHHHH---HhCCCCceEeecCC
Q 015585 226 SGLSILAQGNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDGILTIA---AAGIGIIDLCVRSC 302 (404)
Q Consensus 226 ~~l~~l~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~---~~~~~L~~L~l~~~ 302 (404)
..+..+....++|++|+++++..+++.++..++... ...++|++|+++++ .+++.++..++ ...+.++.+++++|
T Consensus 7 ~~l~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al-~~n~~L~~L~Ls~n-~l~~~~~~~L~~~l~~~~~l~~l~l~~~ 84 (166)
T d1io0a_ 7 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEAL-KTNTYVKKFSIVGT-RSNDPVAFALAEMLKVNNTLKSLNVESN 84 (166)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHH-TTCCSCCEEECTTS-CCCHHHHHHHHHHHHHCSSCCEEECCSS
T ss_pred HHHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHH-hcCCccCeeeccCC-cccHHHHHHHHHHHhhcccchhhhhccc
Confidence 345666667899999999987678888877666321 25678999999997 88887766654 34689999999998
Q ss_pred CCCCHHHHHHHHhhCCCcccCCCCcEEeccCC-CCCCHHHHHhhh--cCCCCcccEEecCCccc
Q 015585 303 FYVTDASVEALARKQPDQEKSKQLRRLDLCNC-IGLSVDSLRWVK--RPSFRGLHWLGIGQTRL 363 (404)
Q Consensus 303 ~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~-~~i~~~~~~~l~--~~~~~~L~~L~l~~~~l 363 (404)
. +++.++..++..+. .+++|+.+++..+ +.+++.+...++ ...+++|+.|+++.+..
T Consensus 85 ~-~~~~g~~~l~~~l~---~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 85 F-ISGSGILALVEALQ---SNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp C-CCHHHHHHHHHGGG---GCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred c-ccchhHHHHHHHHH---hCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 5 99999999998777 7899998887654 478887776664 12488999999987654
No 26
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.80 E-value=8.3e-08 Score=74.68 Aligned_cols=121 Identities=19% Similarity=0.200 Sum_probs=88.1
Q ss_pred hCCCCCCEEEccC-CccCHHHHHHHHh---cCCCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHH
Q 015585 208 SCLRKLTALNLTG-ADITDSGLSILAQ---GNLPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDG 283 (404)
Q Consensus 208 ~~~~~L~~L~l~~-~~l~~~~l~~l~~---~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~ 283 (404)
...|+|++|++.+ +.+++.++..++. ..++|++|++++|. +++.+...++... ...+.++.++++++ .+++.+
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~-l~~~~~~~L~~~l-~~~~~l~~l~l~~~-~~~~~g 90 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTR-SNDPVAFALAEML-KVNNTLKSLNVESN-FISGSG 90 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSC-CCHHHHHHHHHHH-HHCSSCCEEECCSS-CCCHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCc-ccHHHHHHHHHHH-hhcccchhhhhccc-cccchh
Confidence 3568899999987 4788888877775 56788899998885 7777766554211 24578888888886 778887
Q ss_pred HHHHHHh---CCCCceEeecCCC-CCCHHHHHHHHhhCCCcccCCCCcEEeccCC
Q 015585 284 ILTIAAA---GIGIIDLCVRSCF-YVTDASVEALARKQPDQEKSKQLRRLDLCNC 334 (404)
Q Consensus 284 ~~~l~~~---~~~L~~L~l~~~~-~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~ 334 (404)
+..+.+. .+.|+.++|..+. .+++.+...++..+. .+++|+.|++...
T Consensus 91 ~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~---~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 91 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLE---KNTTLLKFGYHFT 142 (166)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHH---HCSSCCEEECCCS
T ss_pred HHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHH---hCCCcCEEeCcCC
Confidence 7766644 4778876665332 588888877777665 6888999988763
No 27
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.65 E-value=6.4e-09 Score=80.67 Aligned_cols=109 Identities=19% Similarity=0.203 Sum_probs=66.7
Q ss_pred ccCCCCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCCC
Q 015585 13 YYSSFNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQGT 92 (404)
Q Consensus 13 ~~~~~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~ 92 (404)
+....++++|+|+++.++.. +.+...+++|++|++++|. +.. ++.+..+++|+.|+++++.
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i--~~~~~~l~~L~~L~Ls~N~---------i~~--l~~~~~l~~L~~L~ls~N~------ 74 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVI--ENLGATLDQFDAIDFSDNE---------IRK--LDGFPLLRRLKTLLVNNNR------ 74 (162)
T ss_dssp EECTTSCEEEECTTSCCCSC--CCGGGGTTCCSEEECCSSC---------CCE--ECCCCCCSSCCEEECCSSC------
T ss_pred ccCcCcCcEEECCCCCCCcc--CccccccccCCEEECCCCC---------CCc--cCCcccCcchhhhhccccc------
Confidence 55677888899998777643 2344557889999998873 222 2346678888888888753
Q ss_pred ccccChhhHHHHHhcCCCCcEEEcCCCCCCCHH-HHHHHHHhCCCCcEEEecCCC
Q 015585 93 FKRVNDMGMFLLSEGCKGLESVRLGGFSKVSDA-GFAAILLSCHSLKKFEVRSAS 146 (404)
Q Consensus 93 ~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~-~~~~l~~~~~~L~~L~l~~~~ 146 (404)
+..+.+. +...+++|+.|+++++ .+.+. .+.. +..+++|++|++++++
T Consensus 75 i~~l~~~----~~~~l~~L~~L~L~~N-~i~~~~~l~~-l~~l~~L~~L~l~~N~ 123 (162)
T d1a9na_ 75 ICRIGEG----LDQALPDLTELILTNN-SLVELGDLDP-LASLKSLTYLCILRNP 123 (162)
T ss_dssp CCEECSC----HHHHCTTCCEEECCSC-CCCCGGGGGG-GGGCTTCCEEECCSSG
T ss_pred ccCCCcc----ccccccccccceeccc-cccccccccc-cccccccchhhcCCCc
Confidence 2223222 1235677777777774 33321 2222 3456666666666664
No 28
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.58 E-value=1.4e-08 Score=89.62 Aligned_cols=134 Identities=19% Similarity=0.107 Sum_probs=74.9
Q ss_pred CCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCCCcccc
Q 015585 17 FNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQGTFKRV 96 (404)
Q Consensus 17 ~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~ 96 (404)
.++++|+|+++.++. ++ ...++|++|++++|... .++ ....+|+.|+++++. ...+
T Consensus 38 ~~l~~LdLs~~~L~~--lp---~~~~~L~~L~Ls~N~l~------~lp-------~~~~~L~~L~l~~n~------l~~l 93 (353)
T d1jl5a_ 38 RQAHELELNNLGLSS--LP---ELPPHLESLVASCNSLT------ELP-------ELPQSLKSLLVDNNN------LKAL 93 (353)
T ss_dssp HTCSEEECTTSCCSC--CC---SCCTTCSEEECCSSCCS------SCC-------CCCTTCCEEECCSSC------CSCC
T ss_pred cCCCEEEeCCCCCCC--CC---CCCCCCCEEECCCCCCc------ccc-------cchhhhhhhhhhhcc------cchh
Confidence 468889998777653 11 23578999999886321 111 124678888887753 1222
Q ss_pred ChhhHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCCCCCH
Q 015585 97 NDMGMFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCRLITS 176 (404)
Q Consensus 97 ~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~ 176 (404)
.+ ..+.|++|+++++ .+... .. ...+++|+.|++.++.... .....+.+..+.+..+....
T Consensus 94 ~~--------lp~~L~~L~L~~n-~l~~l--p~-~~~l~~L~~L~l~~~~~~~------~~~~~~~l~~l~~~~~~~~~- 154 (353)
T d1jl5a_ 94 SD--------LPPLLEYLGVSNN-QLEKL--PE-LQNSSFLKIIDVDNNSLKK------LPDLPPSLEFIAAGNNQLEE- 154 (353)
T ss_dssp CS--------CCTTCCEEECCSS-CCSSC--CC-CTTCTTCCEEECCSSCCSC------CCCCCTTCCEEECCSSCCSS-
T ss_pred hh--------hcccccccccccc-ccccc--cc-hhhhccceeeccccccccc------cccccccccchhhccccccc-
Confidence 21 1246888888875 33321 11 2456788888887774211 11133556666665543221
Q ss_pred HHHHHhhCCCCCCEEeccC
Q 015585 177 ETVKKLASSRNLEVLDLGG 195 (404)
Q Consensus 177 ~~~~~l~~~~~L~~L~l~~ 195 (404)
...+..++.++.+.+..
T Consensus 155 --~~~l~~l~~l~~L~l~~ 171 (353)
T d1jl5a_ 155 --LPELQNLPFLTAIYADN 171 (353)
T ss_dssp --CCCCTTCTTCCEEECCS
T ss_pred --cccccccccceeccccc
Confidence 11233556667776655
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.52 E-value=2e-08 Score=77.81 Aligned_cols=40 Identities=25% Similarity=0.285 Sum_probs=20.4
Q ss_pred CCCCCCEEeccCCCCCCh-HHHHhhhCCCCCCEEEccCCccC
Q 015585 184 SSRNLEVLDLGGCKSIAD-TCLRSISCLRKLTALNLTGADIT 224 (404)
Q Consensus 184 ~~~~L~~L~l~~~~~~~~-~~~~~l~~~~~L~~L~l~~~~l~ 224 (404)
.+++|++|+++++ .+.+ ..+..++.+++|++|++.+|.++
T Consensus 85 ~l~~L~~L~L~~N-~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 85 ALPDLTELILTNN-SLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp HCTTCCEEECCSC-CCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred cccccccceeccc-cccccccccccccccccchhhcCCCccc
Confidence 3555666666553 3322 23344455566666666665443
No 30
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=8.7e-10 Score=92.19 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=20.5
Q ss_pred CCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCccC
Q 015585 184 SSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADIT 224 (404)
Q Consensus 184 ~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~ 224 (404)
.++.++++.+..++.+.......+..+++|+++++.++.+.
T Consensus 76 ~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 76 NLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK 116 (242)
T ss_dssp SCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCC
T ss_pred cccccccccccccccccccccccccccccccccccchhhhc
Confidence 44555555554444444333344445555666666555443
No 31
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.36 E-value=1.1e-07 Score=83.60 Aligned_cols=271 Identities=15% Similarity=0.033 Sum_probs=135.4
Q ss_pred CCCCcEEeccCCCCChHHHHHHHhhCCCccEEeecCCCCCCcccccccchhhhhhhcCC-CCCceEEecccccCCCCCcc
Q 015585 16 SFNLRSLSLVLDVITDELLITITASLPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSC-HHLTGLSLTRCRHNHQGTFK 94 (404)
Q Consensus 16 ~~~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~-~~L~~L~l~~~~~~~~~~~~ 94 (404)
.++|++|+++++.++.. + ...++|++|++.++.. + .+..+ +.|++|+++++. +.
T Consensus 57 ~~~L~~L~Ls~N~l~~l-p----~~~~~L~~L~l~~n~l---------~-----~l~~lp~~L~~L~L~~n~------l~ 111 (353)
T d1jl5a_ 57 PPHLESLVASCNSLTEL-P----ELPQSLKSLLVDNNNL---------K-----ALSDLPPLLEYLGVSNNQ------LE 111 (353)
T ss_dssp CTTCSEEECCSSCCSSC-C----CCCTTCCEEECCSSCC---------S-----CCCSCCTTCCEEECCSSC------CS
T ss_pred CCCCCEEECCCCCCccc-c----cchhhhhhhhhhhccc---------c-----hhhhhccccccccccccc------cc
Confidence 47899999999888732 1 3367999999998732 1 12222 469999998753 22
Q ss_pred ccChhhHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCCCCC
Q 015585 95 RVNDMGMFLLSEGCKGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWCRLI 174 (404)
Q Consensus 95 ~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~ 174 (404)
.+... ..+++|+.|+++++..... ......+..+.+.......... ...++.++.+.+.++...
T Consensus 112 ~lp~~------~~l~~L~~L~l~~~~~~~~------~~~~~~l~~l~~~~~~~~~~~~----l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 112 KLPEL------QNSSFLKIIDVDNNSLKKL------PDLPPSLEFIAAGNNQLEELPE----LQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp SCCCC------TTCTTCCEEECCSSCCSCC------CCCCTTCCEEECCSSCCSSCCC----CTTCTTCCEEECCSSCCS
T ss_pred cccch------hhhccceeecccccccccc------ccccccccchhhcccccccccc----ccccccceeccccccccc
Confidence 23221 4578999999987532111 1123566777766553221111 124566777777665321
Q ss_pred CHHHHHHhhCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCccCHHHHHHHHhcCCCcCEEeecCCCCCcHHH-
Q 015585 175 TSETVKKLASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADITDSGLSILAQGNLPIMNLCLRGCKRVTDKG- 253 (404)
Q Consensus 175 ~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~l~~l~~~~~~L~~L~l~~~~~l~~~~- 253 (404)
.. .......+.+..... .+. .+.....++.|+.+++..+..... .....++..+.+.++. +....
T Consensus 176 ~~-----~~~~~~~~~l~~~~~-~~~--~~~~~~~l~~L~~l~l~~n~~~~~-----~~~~~~l~~~~~~~~~-~~~~~~ 241 (353)
T d1jl5a_ 176 KL-----PDLPLSLESIVAGNN-ILE--ELPELQNLPFLTTIYADNNLLKTL-----PDLPPSLEALNVRDNY-LTDLPE 241 (353)
T ss_dssp SC-----CCCCTTCCEEECCSS-CCS--SCCCCTTCTTCCEEECCSSCCSSC-----CSCCTTCCEEECCSSC-CSCCCC
T ss_pred cc-----ccccccccccccccc-ccc--cccccccccccccccccccccccc-----cccccccccccccccc-cccccc
Confidence 10 001122233333321 111 111223445566666555432210 1122334444443332 11000
Q ss_pred -HHHH---------HhhcCCCCCCccEEecCCCCCCCHHHHHHHHHhCCCCceEeecCCCCCCHHHHHHHHhhCCCcccC
Q 015585 254 -ISHL---------LCVGGTISQSLTTLDLGYMPGISDDGILTIAAAGIGIIDLCVRSCFYVTDASVEALARKQPDQEKS 323 (404)
Q Consensus 254 -~~~l---------~~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~ 323 (404)
...+ ..+...........++... .+. .+...+++|++|++++|. ++. +.. ..
T Consensus 242 ~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~-----~~~~~~~~L~~L~Ls~N~-l~~-----lp~------~~ 303 (353)
T d1jl5a_ 242 LPQSLTFLDVSENIFSGLSELPPNLYYLNASSN-EIR-----SLCDLPPSLEELNVSNNK-LIE-----LPA------LP 303 (353)
T ss_dssp CCTTCCEEECCSSCCSEESCCCTTCCEEECCSS-CCS-----EECCCCTTCCEEECCSSC-CSC-----CCC------CC
T ss_pred ccccccccccccccccccccccchhcccccccC-ccc-----cccccCCCCCEEECCCCc-cCc-----ccc------cc
Confidence 0000 0000000112222233221 111 111235789999999885 442 222 46
Q ss_pred CCCcEEeccCCCCCCHHHHHhhhcCCCCcccEEecCCccccCC
Q 015585 324 KQLRRLDLCNCIGLSVDSLRWVKRPSFRGLHWLGIGQTRLASK 366 (404)
Q Consensus 324 ~~L~~L~l~~~~~i~~~~~~~l~~~~~~~L~~L~l~~~~l~~~ 366 (404)
++|+.|++++| .++.. . ..+++|++|++++|+++..
T Consensus 304 ~~L~~L~L~~N-~L~~l-----~-~~~~~L~~L~L~~N~L~~l 339 (353)
T d1jl5a_ 304 PRLERLIASFN-HLAEV-----P-ELPQNLKQLHVEYNPLREF 339 (353)
T ss_dssp TTCCEEECCSS-CCSCC-----C-CCCTTCCEEECCSSCCSSC
T ss_pred CCCCEEECCCC-cCCcc-----c-cccCCCCEEECcCCcCCCC
Confidence 78999999885 56532 1 2356899999999988644
No 32
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.36 E-value=4e-09 Score=88.06 Aligned_cols=34 Identities=15% Similarity=0.127 Sum_probs=15.0
Q ss_pred CCcEEeccCCCCChHHHHHHHhhCCCccEEeecCC
Q 015585 18 NLRSLSLVLDVITDELLITITASLPFLVELDLEDR 52 (404)
Q Consensus 18 ~L~~L~L~~~~~~~~~~~~i~~~~~~L~~L~l~~~ 52 (404)
++++|+++++.++......+ ..+++|++|++++|
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f-~~l~~L~~L~ls~n 63 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAF-SGFGDLEKIEISQN 63 (242)
T ss_dssp CCSEEEEESCCCCEECTTTT-TTCTTCCEEEEESC
T ss_pred CCCEEECcCCcCCccChhHh-hccchhhhhhhccc
Confidence 45555555544442111112 22555555555554
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.28 E-value=3e-08 Score=79.58 Aligned_cols=57 Identities=21% Similarity=0.221 Sum_probs=29.2
Q ss_pred CCccEEecCCCCCCCHHHHHHHHHhCCCCceEeecCCCCCCHH-HHHHHHhhCCCcccCCCCcEEeccCC
Q 015585 266 QSLTTLDLGYMPGISDDGILTIAAAGIGIIDLCVRSCFYVTDA-SVEALARKQPDQEKSKQLRRLDLCNC 334 (404)
Q Consensus 266 ~~L~~L~l~~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~~~~-~~~~l~~~~~~~~~~~~L~~L~l~~~ 334 (404)
+.|+.|+++++ .++... .+ ..+++|+.|++++|. +++. .+..+. .+++|+.|+++++
T Consensus 93 ~~L~~L~l~~N-~i~~l~--~~-~~l~~L~~L~L~~N~-i~~~~~~~~l~-------~l~~L~~L~L~~N 150 (198)
T d1m9la_ 93 DTLEELWISYN-QIASLS--GI-EKLVNLRVLYMSNNK-ITNWGEIDKLA-------ALDKLEDLLLAGN 150 (198)
T ss_dssp HHCCEEECSEE-ECCCHH--HH-HHHHHSSEEEESEEE-CCCHHHHHHHT-------TTTTCSEEEECSS
T ss_pred ccccccccccc-cccccc--cc-cccccccccccccch-hcccccccccc-------CCCccceeecCCC
Confidence 35666666654 444321 11 133566666666663 4432 233444 3666777776664
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.25 E-value=4e-08 Score=78.80 Aligned_cols=104 Identities=15% Similarity=0.130 Sum_probs=46.8
Q ss_pred CCCccEEeecCCCCCCcccccccchhhhhhhcCCCCCceEEecccccCCCCCccccChhhHHHHHhcCCCCcEEEcCCCC
Q 015585 41 LPFLVELDLEDRPNTEPLARLDLTSSGLQSLGSCHHLTGLSLTRCRHNHQGTFKRVNDMGMFLLSEGCKGLESVRLGGFS 120 (404)
Q Consensus 41 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~ 120 (404)
+++|++|++++| .++. ++.+..+++|+.|+++++. +..+. .+. ..+++|+.|+++++
T Consensus 47 L~~L~~L~Ls~n---------~I~~--i~~l~~l~~L~~L~Ls~N~------i~~i~--~~~---~~~~~L~~L~l~~N- 103 (198)
T d1m9la_ 47 LKACKHLALSTN---------NIEK--ISSLSGMENLRILSLGRNL------IKKIE--NLD---AVADTLEELWISYN- 103 (198)
T ss_dssp TTTCCEEECSEE---------EESC--CCCHHHHTTCCEEECCEEE------ECSCS--SHH---HHHHHCCEEECSEE-
T ss_pred ccccceeECccc---------CCCC--cccccCCccccChhhcccc------ccccc--ccc---cccccccccccccc-
Confidence 666777777664 2221 2234556666666666643 11121 111 11235666666553
Q ss_pred CCCHHHHHHHHHhCCCCcEEEecCCCCCCHHHHHHHHcCCCCccEEEccCC
Q 015585 121 KVSDAGFAAILLSCHSLKKFEVRSASFLSDLAFHDLTGVPCALVEVRLLWC 171 (404)
Q Consensus 121 ~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~ 171 (404)
.++.. .. +..+++|+.|+++++..-....+.. ...+++|+.|+++++
T Consensus 104 ~i~~l--~~-~~~l~~L~~L~L~~N~i~~~~~~~~-l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 104 QIASL--SG-IEKLVNLRVLYMSNNKITNWGEIDK-LAALDKLEDLLLAGN 150 (198)
T ss_dssp ECCCH--HH-HHHHHHSSEEEESEEECCCHHHHHH-HTTTTTCSEEEECSS
T ss_pred ccccc--cc-ccccccccccccccchhcccccccc-ccCCCccceeecCCC
Confidence 33321 11 2334556666665553111122222 234555555555543
No 35
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.25 E-value=2.5e-07 Score=67.87 Aligned_cols=42 Identities=21% Similarity=0.333 Sum_probs=21.3
Q ss_pred hhCCCCCCEEeccCCCCCCh-HHHHhhhCCCCCCEEEccCCccC
Q 015585 182 LASSRNLEVLDLGGCKSIAD-TCLRSISCLRKLTALNLTGADIT 224 (404)
Q Consensus 182 l~~~~~L~~L~l~~~~~~~~-~~~~~l~~~~~L~~L~l~~~~l~ 224 (404)
++.+++|++|+++++ .+.. ..+..+..+++|+.|++++|.++
T Consensus 61 ~~~l~~L~~L~l~~N-~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 61 VANLPRLQELLLCNN-RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp GTTCSSCCEEECCSS-CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cccccccCeEECCCC-ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 445555666666552 3332 22334455566666666655443
No 36
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.23 E-value=2.7e-07 Score=67.63 Aligned_cols=37 Identities=16% Similarity=0.318 Sum_probs=17.5
Q ss_pred cCCCCcEEEcCCCCCCCHH-HHHHHHHhCCCCcEEEecCC
Q 015585 107 GCKGLESVRLGGFSKVSDA-GFAAILLSCHSLKKFEVRSA 145 (404)
Q Consensus 107 ~~~~L~~L~l~~~~~~~~~-~~~~l~~~~~~L~~L~l~~~ 145 (404)
.+++|+.|+++++ .++.. .+.. +..+++|+.|+++++
T Consensus 63 ~l~~L~~L~l~~N-~i~~~~~~~~-l~~~~~L~~L~l~~N 100 (124)
T d1dcea3 63 NLPRLQELLLCNN-RLQQSAAIQP-LVSCPRLVLLNLQGN 100 (124)
T ss_dssp TCSSCCEEECCSS-CCCSSSTTGG-GGGCTTCCEEECTTS
T ss_pred cccccCeEECCCC-ccCCCCCchh-hcCCCCCCEEECCCC
Confidence 4555666666553 22221 1111 344556666666555
No 37
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.06 E-value=6.2e-08 Score=77.45 Aligned_cols=112 Identities=15% Similarity=0.102 Sum_probs=73.8
Q ss_pred CCcCEEeecCCCCCcHHHHHHHHhhcCCCCCCccEEecCCCCCCCHHHHHHHHHhCCCCceEeecCCCCCCHHHHHHHHh
Q 015585 236 LPIMNLCLRGCKRVTDKGISHLLCVGGTISQSLTTLDLGYMPGISDDGILTIAAAGIGIIDLCVRSCFYVTDASVEALAR 315 (404)
Q Consensus 236 ~~L~~L~l~~~~~l~~~~~~~l~~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~ 315 (404)
+++++|+++++. ++.......+ ..+++|+.|++++. .+...... ....+++|++|++++|. ++...-..+.
T Consensus 29 ~~l~~L~Ls~N~-i~~~~~~~~f----~~l~~L~~L~L~~N-~i~~~~~~-~~~~~~~L~~L~Ls~N~-l~~l~~~~F~- 99 (192)
T d1w8aa_ 29 LHTTELLLNDNE-LGRISSDGLF----GRLPHLVKLELKRN-QLTGIEPN-AFEGASHIQELQLGENK-IKEISNKMFL- 99 (192)
T ss_dssp TTCSEEECCSCC-CCSBCCSCSG----GGCTTCCEEECCSS-CCCCBCTT-TTTTCTTCCEEECCSCC-CCEECSSSST-
T ss_pred CCCCEEEeCCCC-Cccccccccc----CCCceEeeeecccc-cccccccc-ccccccccceeeecccc-ccccCHHHHh-
Confidence 579999999886 4321111111 35789999999885 44332211 22346899999999985 5432222222
Q ss_pred hCCCcccCCCCcEEeccCCCCCCHHHHHhhhcCCCCcccEEecCCccccC
Q 015585 316 KQPDQEKSKQLRRLDLCNCIGLSVDSLRWVKRPSFRGLHWLGIGQTRLAS 365 (404)
Q Consensus 316 ~~~~~~~~~~L~~L~l~~~~~i~~~~~~~l~~~~~~~L~~L~l~~~~l~~ 365 (404)
++++|+.|++++ +.++......+. .+++|++|++++|++..
T Consensus 100 ------~l~~L~~L~L~~-N~l~~i~~~~f~--~l~~L~~l~L~~N~~~~ 140 (192)
T d1w8aa_ 100 ------GLHQLKTLNLYD-NQISCVMPGSFE--HLNSLTSLNLASNPFNC 140 (192)
T ss_dssp ------TCTTCCEEECCS-SCCCEECTTSST--TCTTCCEEECTTCCBCC
T ss_pred ------CCCcccccccCC-ccccccCHHHhc--CCccccccccccccccc
Confidence 588999999999 477764444443 48899999999998864
No 38
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.91 E-value=8e-07 Score=70.75 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=15.6
Q ss_pred CCCcEEEcCCCCCCCHHHHHHHHHhCCCCcEEEecCC
Q 015585 109 KGLESVRLGGFSKVSDAGFAAILLSCHSLKKFEVRSA 145 (404)
Q Consensus 109 ~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~ 145 (404)
+++++|+++++ .++.......+..+++|+.|+++++
T Consensus 29 ~~l~~L~Ls~N-~i~~~~~~~~f~~l~~L~~L~L~~N 64 (192)
T d1w8aa_ 29 LHTTELLLNDN-ELGRISSDGLFGRLPHLVKLELKRN 64 (192)
T ss_dssp TTCSEEECCSC-CCCSBCCSCSGGGCTTCCEEECCSS
T ss_pred CCCCEEEeCCC-CCcccccccccCCCceEeeeecccc
Confidence 35666666663 3321100111233455555555554
No 39
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.78 E-value=3.2e-06 Score=64.48 Aligned_cols=41 Identities=22% Similarity=0.171 Sum_probs=18.9
Q ss_pred CCCCcEEeccCCCCCCHHHHHhhhcCCCCcccEEecCCccccCC
Q 015585 323 SKQLRRLDLCNCIGLSVDSLRWVKRPSFRGLHWLGIGQTRLASK 366 (404)
Q Consensus 323 ~~~L~~L~l~~~~~i~~~~~~~l~~~~~~~L~~L~l~~~~l~~~ 366 (404)
+++|+.|++++ +.++......+. .+++|++|++++|.++..
T Consensus 55 l~~L~~L~Ls~-N~l~~i~~~~f~--~l~~L~~L~Ls~N~l~~l 95 (156)
T d2ifga3 55 LGELRNLTIVK-SGLRFVAPDAFH--FTPRLSRLNLSFNALESL 95 (156)
T ss_dssp CCCCSEEECCS-SCCCEECTTGGG--SCSCCCEEECCSSCCSCC
T ss_pred ccccCcceeec-cccCCccccccc--ccccccceeccCCCCccc
Confidence 44555555555 244433222222 245555555555555443
No 40
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.17 E-value=7e-05 Score=56.78 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=17.9
Q ss_pred hCCCCCCEEeccCCCCCChHHHHhhhCCCCCCEEEccCCcc
Q 015585 183 ASSRNLEVLDLGGCKSIADTCLRSISCLRKLTALNLTGADI 223 (404)
Q Consensus 183 ~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~l 223 (404)
..+++|+.|++++ +.+......++..+++|+.|+|++|++
T Consensus 53 ~~l~~L~~L~Ls~-N~l~~i~~~~f~~l~~L~~L~Ls~N~l 92 (156)
T d2ifga3 53 RGLGELRNLTIVK-SGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (156)
T ss_dssp CSCCCCSEEECCS-SCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred ccccccCcceeec-cccCCcccccccccccccceeccCCCC
Confidence 3444555555544 233333333344444555555554443
No 41
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.97 E-value=0.00019 Score=54.62 Aligned_cols=86 Identities=19% Similarity=0.164 Sum_probs=50.6
Q ss_pred HHHHhCCCCceEeecCCCCCCHH-HHHHHHhhCCCcccCCCCcEEeccCCCCCCH-HHHHhhhcCCCCcccEEecCCccc
Q 015585 286 TIAAAGIGIIDLCVRSCFYVTDA-SVEALARKQPDQEKSKQLRRLDLCNCIGLSV-DSLRWVKRPSFRGLHWLGIGQTRL 363 (404)
Q Consensus 286 ~l~~~~~~L~~L~l~~~~~~~~~-~~~~l~~~~~~~~~~~~L~~L~l~~~~~i~~-~~~~~l~~~~~~~L~~L~l~~~~l 363 (404)
.+...+++|+.|++++|. +++. ++..... .+++|+.|++++ +.+++ ..+..+. ...|+.|++++|++
T Consensus 59 ~~~~~~~~L~~L~Ls~N~-i~~l~~~~~~~~------~l~~L~~L~Ls~-N~i~~l~~l~~l~---~~~L~~L~L~~Npl 127 (162)
T d1koha1 59 IIEENIPELLSLNLSNNR-LYRLDDMSSIVQ------KAPNLKILNLSG-NELKSERELDKIK---GLKLEELWLDGNSL 127 (162)
T ss_dssp HHHHHCTTCCCCCCCSSC-CCCCSGGGTHHH------HSTTCCCCCCTT-SCCCCGGGHHHHT---TCCCSSCCCTTSTT
T ss_pred HHHHhCCCCCEeeCCCcc-ccCCchhHHHHh------hCCccccccccc-Cccccchhhhhhh---ccccceeecCCCCc
Confidence 344557788888888774 5432 1222222 477788888887 45554 2233332 45688888888877
Q ss_pred cCCC---hHHHHHHHhcCCccE
Q 015585 364 ASKG---NPVITEIHNERPWLT 382 (404)
Q Consensus 364 ~~~~---~~~~~~~~~~~~~l~ 382 (404)
.... ......+.+.+|+++
T Consensus 128 ~~~~~~~~~y~~~i~~~~P~L~ 149 (162)
T d1koha1 128 SDTFRDQSTYISAIRERFPKLL 149 (162)
T ss_dssp SSSSSSHHHHHHHHHTTSTTCC
T ss_pred CcCcccchhHHHHHHHHCCCCC
Confidence 5431 223445567778776
No 42
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.52 E-value=0.00067 Score=51.48 Aligned_cols=11 Identities=45% Similarity=0.893 Sum_probs=4.6
Q ss_pred CCCCCEEeccC
Q 015585 185 SRNLEVLDLGG 195 (404)
Q Consensus 185 ~~~L~~L~l~~ 195 (404)
+++|+.|++++
T Consensus 90 l~~L~~L~Ls~ 100 (162)
T d1koha1 90 APNLKILNLSG 100 (162)
T ss_dssp STTCCCCCCTT
T ss_pred CCccccccccc
Confidence 34444444443
Done!