Query 015588
Match_columns 404
No_of_seqs 209 out of 1197
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 15:13:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015588.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015588hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 3.3E-70 1.1E-74 561.2 21.4 367 2-396 163-565 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 2.6E-67 8.9E-72 540.6 25.6 358 2-399 183-580 (583)
3 3q9t_A Choline dehydrogenase a 100.0 1.4E-66 4.9E-71 535.4 27.7 361 3-398 168-573 (577)
4 1ju2_A HydroxynitrIle lyase; f 100.0 2.2E-64 7.6E-69 517.4 25.9 360 2-401 152-521 (536)
5 1gpe_A Protein (glucose oxidas 100.0 1.4E-62 4.8E-67 508.7 19.1 366 2-396 187-582 (587)
6 3t37_A Probable dehydrogenase; 100.0 4.2E-59 1.4E-63 478.1 23.6 336 2-394 167-521 (526)
7 2jbv_A Choline oxidase; alcoho 100.0 1.2E-58 3.9E-63 476.0 25.7 340 2-396 164-529 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 2.2E-53 7.6E-58 437.6 16.9 349 3-396 152-542 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 4.6E-49 1.6E-53 401.4 15.4 312 3-398 167-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 1.2E-47 4.2E-52 391.0 13.5 312 2-398 171-506 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 4.4E-41 1.5E-45 349.8 22.4 296 40-397 248-613 (623)
12 4at0_A 3-ketosteroid-delta4-5a 96.8 0.0019 6.5E-08 65.0 7.0 63 52-123 210-273 (510)
13 1d4d_A Flavocytochrome C fumar 94.8 0.044 1.5E-06 55.9 7.1 61 54-123 265-326 (572)
14 1y0p_A Fumarate reductase flav 94.1 0.076 2.6E-06 54.0 6.9 60 53-121 264-324 (571)
15 1qo8_A Flavocytochrome C3 fuma 93.9 0.078 2.7E-06 53.9 6.6 58 54-120 260-318 (566)
16 2h88_A Succinate dehydrogenase 93.7 0.12 4E-06 53.2 7.4 54 53-116 164-218 (621)
17 2wdq_A Succinate dehydrogenase 93.1 0.1 3.5E-06 53.3 5.8 53 55-116 154-207 (588)
18 2rgh_A Alpha-glycerophosphate 92.8 0.16 5.6E-06 51.6 6.8 59 55-124 199-258 (571)
19 1kf6_A Fumarate reductase flav 92.3 0.33 1.1E-05 49.6 8.4 53 55-117 146-199 (602)
20 2bs2_A Quinol-fumarate reducta 92.0 0.32 1.1E-05 50.4 8.0 52 55-116 169-221 (660)
21 4dgk_A Phytoene dehydrogenase; 91.4 0.19 6.3E-06 49.9 5.3 53 55-121 232-284 (501)
22 1chu_A Protein (L-aspartate ox 91.3 0.36 1.2E-05 48.7 7.2 55 56-115 151-208 (540)
23 3da1_A Glycerol-3-phosphate de 91.0 0.44 1.5E-05 48.3 7.7 59 55-124 181-240 (561)
24 3gyx_A Adenylylsulfate reducta 89.8 0.3 1E-05 50.6 5.2 51 58-115 182-233 (662)
25 3dme_A Conserved exported prot 89.7 0.22 7.5E-06 46.8 3.8 58 53-123 159-216 (369)
26 1jnr_A Adenylylsulfate reducta 88.9 0.57 1.9E-05 48.3 6.5 52 58-116 166-219 (643)
27 3dje_A Fructosyl amine: oxygen 87.8 0.42 1.4E-05 46.4 4.5 53 54-121 171-226 (438)
28 3ka7_A Oxidoreductase; structu 85.9 0.69 2.4E-05 44.5 4.8 52 55-121 207-258 (425)
29 3e1t_A Halogenase; flavoprotei 85.1 1.5 5.1E-05 43.6 6.9 50 55-114 122-171 (512)
30 2qcu_A Aerobic glycerol-3-phos 84.5 1.4 4.9E-05 43.7 6.4 55 55-121 160-215 (501)
31 1rp0_A ARA6, thiazole biosynth 83.8 2.3 7.8E-05 38.6 7.1 49 55-113 131-189 (284)
32 1y56_B Sarcosine oxidase; dehy 82.9 1.5 5E-05 41.4 5.6 55 54-124 159-213 (382)
33 2i0z_A NAD(FAD)-utilizing dehy 82.5 1.7 6E-05 42.3 6.1 52 53-118 143-194 (447)
34 3atr_A Conserved archaeal prot 82.3 2.7 9.3E-05 40.9 7.4 51 55-115 111-162 (453)
35 3f8d_A Thioredoxin reductase ( 80.0 5.4 0.00018 36.1 8.2 60 54-124 200-260 (323)
36 3cty_A Thioredoxin reductase; 79.5 2.4 8.3E-05 38.8 5.6 59 56-124 202-261 (319)
37 3r9u_A Thioredoxin reductase; 78.9 3.6 0.00012 37.2 6.7 58 55-122 194-251 (315)
38 3axb_A Putative oxidoreductase 78.8 1.9 6.3E-05 41.9 4.8 56 54-124 191-262 (448)
39 2gag_B Heterotetrameric sarcos 77.1 2.5 8.6E-05 40.0 5.2 55 54-124 184-238 (405)
40 1fl2_A Alkyl hydroperoxide red 76.7 3.6 0.00012 37.3 5.9 56 56-121 192-248 (310)
41 3ab1_A Ferredoxin--NADP reduct 76.4 5.8 0.0002 36.9 7.4 59 56-124 214-272 (360)
42 3cgv_A Geranylgeranyl reductas 75.7 4.1 0.00014 38.3 6.2 50 55-115 113-162 (397)
43 3nyc_A D-arginine dehydrogenas 75.2 1.6 5.5E-05 40.9 3.1 54 54-124 164-217 (381)
44 3itj_A Thioredoxin reductase 1 71.8 5.4 0.00018 36.5 5.8 56 56-121 221-277 (338)
45 2oln_A NIKD protein; flavoprot 70.1 5.3 0.00018 37.7 5.5 53 55-124 164-216 (397)
46 1trb_A Thioredoxin reductase; 69.9 6.6 0.00023 35.6 5.9 58 54-121 194-253 (320)
47 3lxd_A FAD-dependent pyridine 69.1 6.6 0.00023 37.6 6.0 57 54-124 204-260 (415)
48 3jsk_A Cypbp37 protein; octame 68.5 13 0.00046 34.8 7.7 57 55-116 172-252 (344)
49 3fg2_P Putative rubredoxin red 67.7 6.8 0.00023 37.3 5.7 58 53-124 193-250 (404)
50 3ps9_A TRNA 5-methylaminomethy 67.2 4.1 0.00014 42.0 4.3 53 55-123 428-480 (676)
51 2gmh_A Electron transfer flavo 66.7 8 0.00027 39.1 6.2 53 55-116 155-218 (584)
52 2q7v_A Thioredoxin reductase; 66.7 9.2 0.00032 34.9 6.2 55 55-120 199-254 (325)
53 1pj5_A N,N-dimethylglycine oxi 66.7 6.4 0.00022 41.6 5.7 55 54-124 161-215 (830)
54 2q0l_A TRXR, thioredoxin reduc 66.7 9.4 0.00032 34.5 6.2 59 55-123 190-249 (311)
55 1hyu_A AHPF, alkyl hydroperoxi 66.1 7.8 0.00027 38.5 5.9 55 57-121 404-459 (521)
56 3nix_A Flavoprotein/dehydrogen 64.9 12 0.00042 35.4 6.9 48 56-114 118-165 (421)
57 1mo9_A ORF3; nucleotide bindin 64.0 11 0.00038 37.4 6.6 61 54-124 265-326 (523)
58 2e5v_A L-aspartate oxidase; ar 64.0 4.7 0.00016 39.6 3.8 47 55-115 130-176 (472)
59 1vdc_A NTR, NADPH dependent th 63.0 12 0.00042 34.0 6.3 60 54-121 205-265 (333)
60 3pvc_A TRNA 5-methylaminomethy 62.9 4.7 0.00016 41.7 3.7 54 55-123 423-476 (689)
61 3p1w_A Rabgdi protein; GDI RAB 62.4 8 0.00027 38.1 5.1 50 52-114 264-313 (475)
62 3nlc_A Uncharacterized protein 61.4 10 0.00035 38.1 5.7 47 56-116 232-278 (549)
63 3nrn_A Uncharacterized protein 61.0 6.2 0.00021 37.7 4.0 51 54-121 199-249 (421)
64 2zxi_A TRNA uridine 5-carboxym 60.2 8.9 0.0003 39.2 5.1 46 56-116 136-181 (637)
65 3v76_A Flavoprotein; structura 58.9 13 0.00043 35.9 5.8 49 54-118 142-190 (417)
66 3lzw_A Ferredoxin--NADP reduct 58.9 9.6 0.00033 34.6 4.7 59 55-124 200-259 (332)
67 3i3l_A Alkylhalidase CMLS; fla 58.8 6.9 0.00024 39.7 4.0 49 54-113 138-186 (591)
68 2gjc_A Thiazole biosynthetic e 58.4 16 0.00056 33.9 6.2 35 54-88 157-192 (326)
69 2cul_A Glucose-inhibited divis 57.6 18 0.00061 31.4 6.1 47 56-117 81-127 (232)
70 2uzz_A N-methyl-L-tryptophan o 55.8 7.8 0.00027 36.1 3.6 48 55-119 160-207 (372)
71 2gf3_A MSOX, monomeric sarcosi 55.6 10 0.00036 35.4 4.5 51 54-121 160-210 (389)
72 1ryi_A Glycine oxidase; flavop 54.3 8.7 0.0003 35.9 3.7 53 55-124 175-227 (382)
73 2zbw_A Thioredoxin reductase; 52.8 19 0.00067 32.7 5.8 60 54-124 201-261 (335)
74 3s5w_A L-ornithine 5-monooxyge 52.7 18 0.00062 34.8 5.8 49 57-116 329-378 (463)
75 2bcg_G Secretory pathway GDP d 51.6 12 0.0004 36.4 4.2 46 55-114 253-299 (453)
76 3ces_A MNMG, tRNA uridine 5-ca 47.2 18 0.00061 37.1 4.8 45 57-116 138-182 (651)
77 3s5w_A L-ornithine 5-monooxyge 46.4 19 0.00063 34.8 4.7 52 54-113 137-190 (463)
78 3oz2_A Digeranylgeranylglycero 46.0 38 0.0013 31.2 6.8 51 55-117 113-163 (397)
79 2a87_A TRXR, TR, thioredoxin r 45.1 17 0.00058 33.3 4.0 56 55-121 202-258 (335)
80 4g6h_A Rotenone-insensitive NA 45.0 12 0.00042 36.9 3.2 42 349-393 354-396 (502)
81 2bry_A NEDD9 interacting prote 44.5 12 0.00039 37.0 2.9 56 55-118 177-233 (497)
82 3c4n_A Uncharacterized protein 42.3 8 0.00027 36.8 1.3 54 54-124 182-245 (405)
83 1vg0_A RAB proteins geranylger 41.7 32 0.0011 35.2 5.7 50 52-113 386-435 (650)
84 3ef6_A Toluene 1,2-dioxygenase 41.6 19 0.00064 34.3 3.8 56 54-124 195-250 (410)
85 2xve_A Flavin-containing monoo 41.1 19 0.00065 35.0 3.8 59 57-124 114-175 (464)
86 3cp8_A TRNA uridine 5-carboxym 40.7 35 0.0012 34.8 5.8 46 56-116 130-175 (641)
87 1yvv_A Amine oxidase, flavin-c 40.4 19 0.00064 32.7 3.5 49 58-120 119-167 (336)
88 2gqf_A Hypothetical protein HI 40.0 36 0.0012 32.3 5.6 54 53-118 118-171 (401)
89 4a9w_A Monooxygenase; baeyer-v 39.0 14 0.00048 33.7 2.4 56 54-124 86-141 (357)
90 1k0i_A P-hydroxybenzoate hydro 38.8 40 0.0014 31.4 5.7 50 56-116 115-164 (394)
91 4dgk_A Phytoene dehydrogenase; 38.5 13 0.00044 36.3 2.2 43 354-400 452-494 (501)
92 2vvm_A Monoamine oxidase N; FA 38.3 48 0.0016 32.1 6.3 43 56-113 268-310 (495)
93 1d5t_A Guanine nucleotide diss 36.9 22 0.00074 34.2 3.4 44 56-114 246-289 (433)
94 2qa2_A CABE, polyketide oxygen 36.6 63 0.0021 31.6 6.9 48 56-115 119-166 (499)
95 2v3a_A Rubredoxin reductase; a 35.6 60 0.0021 30.3 6.3 57 53-124 196-252 (384)
96 2e4g_A Tryptophan halogenase; 35.5 36 0.0012 33.8 4.9 43 57-113 208-250 (550)
97 3iwa_A FAD-dependent pyridine 35.1 50 0.0017 31.9 5.9 57 53-124 211-267 (472)
98 2x3n_A Probable FAD-dependent 35.0 39 0.0013 31.6 4.9 46 57-116 121-167 (399)
99 3qj4_A Renalase; FAD/NAD(P)-bi 34.5 22 0.00077 32.5 3.0 41 58-113 123-163 (342)
100 2gv8_A Monooxygenase; FMO, FAD 34.1 25 0.00085 33.8 3.4 56 58-124 129-186 (447)
101 2qa1_A PGAE, polyketide oxygen 33.6 58 0.002 31.9 6.1 49 56-116 118-166 (500)
102 1q1r_A Putidaredoxin reductase 33.1 43 0.0015 32.0 4.9 58 54-124 201-259 (431)
103 2qae_A Lipoamide, dihydrolipoy 32.9 44 0.0015 32.2 5.0 59 55-124 227-287 (468)
104 3uox_A Otemo; baeyer-villiger 32.9 21 0.00071 35.7 2.6 51 43-113 336-389 (545)
105 3ihg_A RDME; flavoenzyme, anth 32.6 37 0.0013 33.5 4.5 49 57-115 133-183 (535)
106 3gwf_A Cyclohexanone monooxyge 32.2 19 0.00064 36.0 2.2 52 43-113 328-382 (540)
107 3gwf_A Cyclohexanone monooxyge 31.8 17 0.00059 36.2 1.8 57 55-124 98-156 (540)
108 2ywl_A Thioredoxin reductase r 31.6 49 0.0017 26.8 4.5 52 54-124 66-117 (180)
109 3hyw_A Sulfide-quinone reducta 31.5 53 0.0018 31.3 5.3 49 348-396 275-331 (430)
110 3urh_A Dihydrolipoyl dehydroge 31.4 71 0.0024 31.0 6.3 59 55-124 250-311 (491)
111 2weu_A Tryptophan 5-halogenase 30.4 34 0.0012 33.4 3.7 45 55-113 184-228 (511)
112 1m6i_A Programmed cell death p 29.7 52 0.0018 32.1 4.9 57 53-124 235-291 (493)
113 3hyw_A Sulfide-quinone reducta 28.9 56 0.0019 31.2 4.9 55 54-124 210-264 (430)
114 3f8d_A Thioredoxin reductase ( 28.6 55 0.0019 29.1 4.6 45 349-396 270-315 (323)
115 3ic9_A Dihydrolipoamide dehydr 28.5 57 0.002 31.8 5.0 55 59-124 229-285 (492)
116 4at0_A 3-ketosteroid-delta4-5a 27.6 54 0.0019 32.1 4.6 52 344-395 447-508 (510)
117 4ap3_A Steroid monooxygenase; 27.5 18 0.00063 36.1 1.1 57 55-124 110-168 (549)
118 1sez_A Protoporphyrinogen oxid 27.4 16 0.00054 35.7 0.7 52 59-115 256-308 (504)
119 3i6d_A Protoporphyrinogen oxid 27.3 57 0.0019 31.0 4.7 46 59-119 248-293 (470)
120 2h88_A Succinate dehydrogenase 26.0 74 0.0025 32.3 5.4 51 345-395 366-430 (621)
121 2vqe_L 30S ribosomal protein S 26.0 32 0.0011 27.2 2.0 23 128-150 64-86 (135)
122 3h28_A Sulfide-quinone reducta 25.6 1.3E+02 0.0045 28.3 6.9 57 53-124 209-266 (430)
123 2gag_A Heterotetrameric sarcos 25.4 71 0.0024 34.3 5.3 59 57-124 329-392 (965)
124 3dgh_A TRXR-1, thioredoxin red 25.1 66 0.0023 31.1 4.7 57 54-120 237-294 (483)
125 2dkh_A 3-hydroxybenzoate hydro 25.0 75 0.0026 32.2 5.3 54 58-118 157-214 (639)
126 2aqj_A Tryptophan halogenase, 24.8 53 0.0018 32.4 4.0 44 56-113 177-220 (538)
127 1y0p_A Fumarate reductase flav 24.3 70 0.0024 31.8 4.8 51 345-395 506-566 (571)
128 3lad_A Dihydrolipoamide dehydr 24.1 92 0.0032 29.9 5.5 53 55-119 232-284 (476)
129 3nks_A Protoporphyrinogen oxid 24.1 32 0.0011 33.1 2.1 49 56-119 246-294 (477)
130 3k7m_X 6-hydroxy-L-nicotine ox 24.0 86 0.0029 29.4 5.2 43 55-113 215-257 (431)
131 2ivd_A PPO, PPOX, protoporphyr 24.0 44 0.0015 32.1 3.1 49 59-120 250-299 (478)
132 2jae_A L-amino acid oxidase; o 24.0 1.2E+02 0.0043 29.0 6.5 42 59-112 252-293 (489)
133 2r0c_A REBC; flavin adenine di 23.6 1.4E+02 0.0048 29.4 6.9 46 61-117 152-198 (549)
134 2eq6_A Pyruvate dehydrogenase 23.1 1E+02 0.0036 29.5 5.7 59 54-124 220-282 (464)
135 3fmw_A Oxygenase; mithramycin, 22.6 66 0.0023 32.2 4.2 48 56-115 160-207 (570)
136 3d1c_A Flavin-containing putat 22.5 71 0.0024 29.2 4.2 52 50-117 93-145 (369)
137 2bs2_A Quinol-fumarate reducta 22.3 84 0.0029 32.1 5.0 49 345-394 371-425 (660)
138 3lov_A Protoporphyrinogen oxid 22.0 34 0.0012 32.9 1.9 45 59-119 249-293 (475)
139 2hqm_A GR, grase, glutathione 21.9 43 0.0015 32.5 2.6 59 54-124 236-295 (479)
140 3c66_C PRE-mRNA polyadenylatio 21.9 13 0.00043 20.4 -0.7 8 106-113 3-10 (26)
141 1qo8_A Flavocytochrome C3 fuma 21.8 86 0.0029 31.1 4.9 51 345-395 501-561 (566)
142 3l8k_A Dihydrolipoyl dehydroge 21.4 60 0.002 31.3 3.5 56 59-124 226-282 (466)
143 4b63_A L-ornithine N5 monooxyg 21.2 78 0.0027 30.9 4.4 59 50-113 150-212 (501)
144 1d4d_A Flavocytochrome C fumar 20.4 92 0.0032 31.0 4.8 51 345-395 506-567 (572)
145 3uox_A Otemo; baeyer-villiger 20.3 75 0.0026 31.5 4.0 52 60-124 105-156 (545)
146 3dgz_A Thioredoxin reductase 2 20.1 1E+02 0.0036 29.7 5.0 62 53-124 234-298 (488)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=3.3e-70 Score=561.22 Aligned_cols=367 Identities=22% Similarity=0.345 Sum_probs=267.8
Q ss_pred chhHHHHHHHHHHc--CCcCCCCCcccCCCceeeEEEEEC---CCCceecHHH-hhh-hcCCCCeEEecCcEEEEEEEec
Q 015588 2 RQWQSAVRDGLVEV--GVLPYNGFTYDHMYGTKIGGTIFD---QNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRI 74 (404)
Q Consensus 2 ~p~~~~~~~a~~~~--G~~~~~~~~~d~~~g~~~g~~~~~---~~g~R~s~~~-~l~-~~~r~nl~v~~~a~V~rv~~~~ 74 (404)
.|+...|.++++++ |+ +++ .|.+++...|.+.++ .+|+|++++. ||. ...|+||+|+++++|+||+|+.
T Consensus 163 ~~~~~~~~~a~~~~~~G~-~~~---~d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~ 238 (566)
T 3fim_B 163 TPLDDRVLATTQEQSEEF-FFN---PDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSG 238 (566)
T ss_dssp CTHHHHHHHHHHHTHHHH-CBC---SCGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCE
T ss_pred CHHHHHHHHHHHHHhcCC-Ccc---CCCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeec
Confidence 46788999999999 97 665 355566666665432 4899999987 875 6689999999999999999982
Q ss_pred CCCCCCeEEEEEEEeCCC-ceeEEEeecCCCceEEEecCCcCchHHHHhhc--------CCCceeeecCcccCCcCcCCC
Q 015588 75 KGKARPVAHGVVFRDATG-AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 145 (404)
Q Consensus 75 ~~~~~~~a~GV~~~~~~g-~~~~v~~~~~a~keVILsAGai~TP~LLl~SG--------~~gI~~~~d~p~VG~nl~DH~ 145 (404)
...+..+|+||+|.+.+| +.++++ |+||||||||+|+||||||+|| ++||++++|||+||+|||||+
T Consensus 239 ~~~g~~rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~ 314 (566)
T 3fim_B 239 TTNGLPAFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHL 314 (566)
T ss_dssp EETTEEECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCE
T ss_pred CCCCCCEEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCc
Confidence 100114899999987546 777775 7899999999999999999999 899999999999999999999
Q ss_pred CceeeeeCCCCccch-h-h-hhhccchhhhhHHhhccccccCCCCCCCcccccCcccC--ccccCC---CCCCChHHHHH
Q 015588 146 MNAIFVPSPVPVEVS-L-I-QVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIG--QLSKVP---PKQRTPEAIAE 217 (404)
Q Consensus 146 ~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~ 217 (404)
.+.+.+..+.+.... . . .........+|...+.|+ +.... ....+++..... .+.... .....+++. -
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-l~~~~--~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~-~ 390 (566)
T 3fim_B 315 LLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGP-LTALI--ANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWE-T 390 (566)
T ss_dssp EECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSG-GGCCS--CSEEEEECCCTTCGGGGTSCCCSSSTTSCSEE-E
T ss_pred cceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCC-cccCh--hhheeeeccccchhhhhhhccccccCCCCCEE-E
Confidence 887777665432211 0 0 000112234566667776 33110 011122211000 000000 000011100 0
Q ss_pred HHhhh--c-cC-CCCCCCcceeeeeecccccceEEEeccCCCCCCCeeeCCCCCChhhHHHHHHHHHHHHHHHccccccc
Q 015588 218 AIENM--K-AL-DDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSK 293 (404)
Q Consensus 218 ~~~~~--~-~~-~~~~~~~~~~~~~~~~P~srG~V~l~s~dp~~~P~I~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 293 (404)
++... . .. ........++...+++|+|||+|+|+|+||++.|+|++||+++|.|++.|++++|++++|+++++++.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~ 470 (566)
T 3fim_B 391 IFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWAD 470 (566)
T ss_dssp EEESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGTT
T ss_pred EecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccCC
Confidence 00000 0 00 00011123566788999999999999999999999999999999999999999999999999999988
Q ss_pred cccccCchhhhhccccCCCCCCCC--CCCCChHHHHHHHHhhcccccccccccCCC------ceecCCCeeeeccCceEe
Q 015588 294 FKYESMSVPILVNMTASAPVNLLP--RHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVI 365 (404)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVv 365 (404)
+...+. .| ....+|++|++|+|+...+.||++|||||| +|||++|||||++|||||
T Consensus 471 ~~~~~~----------------~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVv 534 (566)
T 3fim_B 471 FVIRPF----------------DPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIV 534 (566)
T ss_dssp TEEEES----------------SGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEEC
T ss_pred cccccc----------------CCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEc
Confidence 764321 12 135789999999999999999999999998 799999999999999999
Q ss_pred eccccCCCCCCChHHHHHHHHHHHHHHHHhh
Q 015588 366 DGSTFYYSPGTNPQATVMMLGRYMGVRILSE 396 (404)
Q Consensus 366 DaSv~P~~~~~np~~t~~aiaer~A~~ii~~ 396 (404)
||||||+++++||++|+||||||+|+.|+++
T Consensus 535 DaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 535 DGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp SGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999998877654
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=2.6e-67 Score=540.56 Aligned_cols=358 Identities=22% Similarity=0.257 Sum_probs=257.4
Q ss_pred chhHHHHHHHHHHcCCcCCCCCcccCCCceeeEEEEE----CCCCceecHHH-hhh-hcCCCCeEEecCcEEEEEEEecC
Q 015588 2 RQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIF----DQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIK 75 (404)
Q Consensus 2 ~p~~~~~~~a~~~~G~~~~~~~~~d~~~g~~~g~~~~----~~~g~R~s~~~-~l~-~~~r~nl~v~~~a~V~rv~~~~~ 75 (404)
.|+.+.|.++++++|+ +++ .|.+++...|.... ..+|.|++++. ||. ...|+||+|+++++|+||+|++.
T Consensus 183 ~~~~~~~~~a~~~~G~-~~~---~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~ 258 (583)
T 3qvp_A 183 SPIVKALMSAVEDRGV-PTK---KDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLLSQN 258 (583)
T ss_dssp CTHHHHHHHHHHTTTC-CBC---CCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEEECS
T ss_pred CHHHHHHHHHHHHcCC-CcC---CCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEeccC
Confidence 4678899999999998 555 35566666665543 24789999987 875 66899999999999999999852
Q ss_pred CCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc--------CCCceeeecCcccCCcCcCCCCc
Q 015588 76 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMN 147 (404)
Q Consensus 76 ~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG--------~~gI~~~~d~p~VG~nl~DH~~~ 147 (404)
+ ++.+|+||++.+.+|+.++++ |+||||||||+|+||||||+|| ++||++++||| ||+|||||+.+
T Consensus 259 ~-~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~NLqDH~~~ 332 (583)
T 3qvp_A 259 G-TTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGLNLQDQTTA 332 (583)
T ss_dssp S-SSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTCCBBCCEEE
T ss_pred C-CCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cccchhhCccc
Confidence 1 124899999985578888876 7899999999999999999999 89999999999 99999999998
Q ss_pred eeeeeCCCCcc--------chhhhhhcc--chhhhhHHhhccccccCCCCCCCcccccCcccCccccCCCCCCChHHHHH
Q 015588 148 AIFVPSPVPVE--------VSLIQVVGI--TQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAE 217 (404)
Q Consensus 148 ~~~~~~~~~~~--------~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (404)
.+.+..+.+.. ..+....+. .....|+....+. |... .. +.+.+. ....+...
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~--~~~~~~------~~~~~~~~ 395 (583)
T 3qvp_A 333 TVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQ-WAEE--------AV--ARGGFH------NTTALLIQ 395 (583)
T ss_dssp EEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHH-HHHH--------HH--HTTSCS------CHHHHHHH
T ss_pred eEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcch-hhcc--------cc--cccCcc------ccHHHHhh
Confidence 88777653210 001011100 0000111111110 0000 00 000000 00011110
Q ss_pred HHh---hh--ccCCC--CC--CC-cceeeeeecccccceEEEeccCCCCCCCee-eCCCCCChhhHHHHHHHHHHHHHHH
Q 015588 218 AIE---NM--KALDD--PA--FR-GGFILEKVMGPVSTGHLELRTRNPNDNPSV-TFNYFKEPEDLQRCVQGISTIEKII 286 (404)
Q Consensus 218 ~~~---~~--~~~~~--~~--~~-~~~~~~~~~~P~srG~V~l~s~dp~~~P~I-~~~~~~~~~D~~~~~~~~~~~~~i~ 286 (404)
+.. .. ...+. .. .. ...+....++|+|||+|+|+|+||++.|.| ++||+++|.|++.|++++|++++|+
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~ 475 (583)
T 3qvp_A 396 YENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNIS 475 (583)
T ss_dssp HHHHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred hccchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 000 00 00000 00 01 122334458999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccCchhhhhccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccccCCC-----ceecCCCeeeeccC
Q 015588 287 ESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDA 361 (404)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG-----~VVD~~lrV~Gv~n 361 (404)
++++++.+...+. .|+|. . ....+|++|++|+|+...+.||++|||||| +|||++||||||+|
T Consensus 476 ~~~~~~~~~~~~~-~pg~~----------~-~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~Gv~~ 543 (583)
T 3qvp_A 476 NSGAMQTYFAGET-IPGDN----------L-AYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARVYGVQG 543 (583)
T ss_dssp TSTTHHHHEEEEE-ESGGG----------S-CTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBS
T ss_pred hCcchhhcccccc-CCCcc----------c-ccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCCCeEecCCC
Confidence 9999887763221 11110 0 123689999999999999999999999999 79999999999999
Q ss_pred ceEeeccccCCCCCCChHHHHHHHHHHHHHHHHhhhhc
Q 015588 362 LRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLA 399 (404)
Q Consensus 362 LrVvDaSv~P~~~~~np~~t~~aiaer~A~~ii~~~~~ 399 (404)
||||||||||+++++||++|+||||||+||.| +++|+
T Consensus 544 LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I-~~~~~ 580 (583)
T 3qvp_A 544 LRVIDGSIPPTQMSSHVMTVFYAMALKISDAI-LEDYA 580 (583)
T ss_dssp EEECSTTCCSSCCSSCSHHHHHHHHHHHHHHH-HHHHH
T ss_pred eEEeecccCCCCCCcCcHHHHHHHHHHHHHHH-HHhhh
Confidence 99999999999999999999999999988755 45554
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.4e-66 Score=535.36 Aligned_cols=361 Identities=20% Similarity=0.278 Sum_probs=263.0
Q ss_pred hhHHHHHHHHHHcCCcCCCCCcccCCCceeeEEEEE---CCCCceecHHHhhhhcCCCCeEEecCcEEEEEEEecCCCCC
Q 015588 3 QWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKAR 79 (404)
Q Consensus 3 p~~~~~~~a~~~~G~~~~~~~~~d~~~g~~~g~~~~---~~~g~R~s~~~~l~~~~r~nl~v~~~a~V~rv~~~~~~~~~ 79 (404)
|+.+.|.++++++|+ +++ .|.+++...|.... ..+|.|++++.|+ ..|+||+|+++++|+||++++.+
T Consensus 168 ~~~~~~~~a~~~~G~-~~~---~d~n~~~~~G~~~~~~~~~~g~R~s~~~~l--~~r~Nl~v~~~a~v~ri~~~~~~--- 238 (577)
T 3q9t_A 168 PFRENLTKAWKSMGQ-PLI---ENIYDGEMDGLTHCCDTIYRGQRSGSFLFV--KNKPNITIVPEVHSKRLIINEAD--- 238 (577)
T ss_dssp HHHHHHHHHHHHTTC-CBC---SCCSSSCCCEEEECEESEETTEECCGGGGS--SSCTTEEEECSEEEEEEEEETTT---
T ss_pred hHHHHHHHHHHHcCC-CcC---CCCCCCCcCeEEeecceecCCeEeeHHHHH--hcCCCeEEEcCcEEEEEEEeCCC---
Confidence 577889999999998 555 35556666665432 2578999876553 56899999999999999998532
Q ss_pred CeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc--------CCCceeeecCcccCCcCcCCCCceeee
Q 015588 80 PVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFV 151 (404)
Q Consensus 80 ~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG--------~~gI~~~~d~p~VG~nl~DH~~~~~~~ 151 (404)
.+|+||++.+.+|+.++++ |+||||||||+|+||||||+|| ++||++++|||+||+|||||+...+.+
T Consensus 239 ~~a~GV~~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~~~~~ 314 (577)
T 3q9t_A 239 RTCKGVTVVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGVPFVL 314 (577)
T ss_dssp TEEEEEEEEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEEEEEE
T ss_pred CEEEEEEEEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCcceeEEE
Confidence 4899999987558777775 7899999999999999999999 999999999999999999999988887
Q ss_pred eCCCCccch-h-h--hhhccchhhhhHHhhccccccCCCCCCCcccccCccc--C-------------ccc-cCCCCCCC
Q 015588 152 PSPVPVEVS-L-I--QVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI--G-------------QLS-KVPPKQRT 211 (404)
Q Consensus 152 ~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~-------------~~~-~~~~~~~~ 211 (404)
.++.+.... . . ..........|...+.|+ +... .....++..... . ... ..+.. .
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gp-l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 389 (577)
T 3q9t_A 315 RVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGP-VGSG--LLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLG--Q 389 (577)
T ss_dssp EECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSG-GGCC--SEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTTS--C
T ss_pred EeCCCCccchhhhcchhHHHHHHHHHHhcCCCC-cccc--hhheeEEeecChhhhcchhhhhhhhccccccccCCCC--C
Confidence 766543210 0 0 000112334566666675 3211 000011111000 0 000 00000 0
Q ss_pred hHHHHHHH----hhhc-cCC-CCCCCcceeeeeecccccce-EEEeccCCCCCCCeeeCCCCCChhhHHHHHHHHHHHHH
Q 015588 212 PEAIAEAI----ENMK-ALD-DPAFRGGFILEKVMGPVSTG-HLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEK 284 (404)
Q Consensus 212 ~~~~~~~~----~~~~-~~~-~~~~~~~~~~~~~~~P~srG-~V~l~s~dp~~~P~I~~~~~~~~~D~~~~~~~~~~~~~ 284 (404)
+++...+. .... ... ......+++...+++|+||| +|+|+|+||++.|.|++||+++|.|++.|+++++++++
T Consensus 390 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~~~~ 469 (577)
T 3q9t_A 390 PHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFSYD 469 (577)
T ss_dssp CSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHHHHH
Confidence 00000000 0000 000 00011234667789999999 99999999999999999999999999999999999999
Q ss_pred HH-ccccccccccccCchhhhhccccCCCCCCCC-CCCCChHHHHHHHHhhcccccccccccCCC-----ceecCCCeee
Q 015588 285 II-ESKSFSKFKYESMSVPILVNMTASAPVNLLP-RHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVL 357 (404)
Q Consensus 285 i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG-----~VVD~~lrV~ 357 (404)
|+ ++++++++...+ ..| ....+|++|++|+|+...+.||++|||||| +|||++||||
T Consensus 470 i~~~~~~~~~~~~~e----------------~~p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~ 533 (577)
T 3q9t_A 470 LLFKGEGFKDLVESE----------------YPWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVDPKLKVH 533 (577)
T ss_dssp HHHHSTTGGGTEEEE----------------ESSCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBCTTCBBT
T ss_pred HHHhChhhhhccccc----------------cCCCCCcCCHHHHHHHHHhccccccccccceecCCCCCCceECCCCeEe
Confidence 99 899998876432 112 245789999999999999999999999999 6999999999
Q ss_pred eccCceEeeccccCCCCCCChHHHHHHHHHHHHHHHHhhhh
Q 015588 358 GVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERL 398 (404)
Q Consensus 358 Gv~nLrVvDaSv~P~~~~~np~~t~~aiaer~A~~ii~~~~ 398 (404)
|++|||||||||||+++++||++|+||||||+|+.|+ ++|
T Consensus 534 Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~-~~~ 573 (577)
T 3q9t_A 534 GIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIK-AEH 573 (577)
T ss_dssp TCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHH-HHC
T ss_pred CCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHH-hhh
Confidence 9999999999999999999999999999999887554 444
No 4
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=2.2e-64 Score=517.39 Aligned_cols=360 Identities=41% Similarity=0.756 Sum_probs=266.7
Q ss_pred chhHHHHHHHHHHcCCcCCCCCcccCCCceeeEEEEECCCCceecHHHhhhhcCCCCeEEecCcEEEEEEEecCCCCCCe
Q 015588 2 RQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPV 81 (404)
Q Consensus 2 ~p~~~~~~~a~~~~G~~~~~~~~~d~~~g~~~g~~~~~~~g~R~s~~~~l~~~~r~nl~v~~~a~V~rv~~~~~~~~~~~ 81 (404)
.|+...|.++++++|+.+.++...+...|...|.+.++++|.|++++.|++.+.++|++|+++++|+||++++++ +.+
T Consensus 152 ~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~~--~~~ 229 (536)
T 1ju2_A 152 QSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNAP--GLT 229 (536)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCBCCSEEEECEESBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCSS--SCB
T ss_pred CcHHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEEECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCCC--CCE
Confidence 467888999999999866554333445555555555557899998877777667899999999999999998631 248
Q ss_pred EEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc--------CCCceeeecCcccCCcCcCCCCceeeeeC
Q 015588 82 AHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPS 153 (404)
Q Consensus 82 a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG--------~~gI~~~~d~p~VG~nl~DH~~~~~~~~~ 153 (404)
|+||++.+.+|+.++++++ ++|+||||||+|+||+|||+|| ++||++++|+|+||+|||||+...+.+.+
T Consensus 230 ~~GV~~~~~~g~~~~~~v~--a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~ 307 (536)
T 1ju2_A 230 ATGVIYRDSNGTPHQAFVR--SKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILP 307 (536)
T ss_dssp EEEEEEECTTSCEEEEEEE--EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECC
T ss_pred EEEEEEEeCCCceEEEEec--cCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEe
Confidence 9999998656776555321 5799999999999999999999 78999999999999999999988777766
Q ss_pred CCCccchhhhhhccchhhhhHHhhccccccCCCCCCCcccccCcccCccccCCCCCCChHHHHHHHhhhccCCCCCCCcc
Q 015588 154 PVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGG 233 (404)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (404)
+.+......+..+.. ..|.....|+ +... . ..+..++... ...+.. ...
T Consensus 308 ~~~~~~~~~~~~~~~--~~~~~~~~g~-~~~~------~-------~~~~~~~~~~-------------~~~~~~--~~~ 356 (536)
T 1ju2_A 308 PNPIEPTIVTVLGIS--NDFYQCSFSS-LPFT------T-------PPFGFFPSSS-------------YPLPNS--TFA 356 (536)
T ss_dssp SSCCCCCCCCEEEEC--SSEEEEEEEE-CCCS------S-------CCBTTBSSSC-------------CCCCSS--CEE
T ss_pred CCCcccccchhhhHH--HHHHHcCCCC-CCCC------h-------hhheeecCcc-------------cCCCCc--ceE
Confidence 543211100000000 0122222222 1100 0 0000111100 000101 112
Q ss_pred eeeeeecccccceEEEe-ccCCCCCCCeeeCCCCCChhhHHHHHHHHHHHHHHHccccccccccccC-chhhhhccccCC
Q 015588 234 FILEKVMGPVSTGHLEL-RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESM-SVPILVNMTASA 311 (404)
Q Consensus 234 ~~~~~~~~P~srG~V~l-~s~dp~~~P~I~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~ 311 (404)
++...+++|+|||+|+| +|+||++.|.|++||+.+|.|++.++++++++++++++++++.+...+. ..|++....
T Consensus 357 ~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~--- 433 (536)
T 1ju2_A 357 HFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILG--- 433 (536)
T ss_dssp EEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCCSTTCSCCBSS---
T ss_pred EEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhccccccCCCccccc---
Confidence 45567789999999999 8999999999999999999999999999999999999999888764321 111110000
Q ss_pred CCCCCCCCCCChHHHHHHHHhhcccccccccccCCCceecCCCeeeeccCceEeeccccCCCCCCChHHHHHHHHHHHHH
Q 015588 312 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGV 391 (404)
Q Consensus 312 ~~~~~p~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiaer~A~ 391 (404)
...|....+|++|++|+|+...+.||++||||||+|||++|||||++|||||||||||+++++||++|+||||||+|+
T Consensus 434 --~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~ 511 (536)
T 1ju2_A 434 --IPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGI 511 (536)
T ss_dssp --SCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBTTTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHH
T ss_pred --cCCCcccCCHHHHHHHHHhccCccccCcCccCCccEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHH
Confidence 002323468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhccc
Q 015588 392 RILSERLASN 401 (404)
Q Consensus 392 ~ii~~~~~~~ 401 (404)
+||+++|..+
T Consensus 512 ~ii~~~~~~~ 521 (536)
T 1ju2_A 512 KILQERSASD 521 (536)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHhhhhhc
Confidence 9999988754
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=1.4e-62 Score=508.66 Aligned_cols=366 Identities=20% Similarity=0.197 Sum_probs=256.3
Q ss_pred chhHHHHHHHHHHcCCcCCCCCcccCCCceeeEEEEE----CCCCceecHHH-hhh-hcCCCCeEEecCcEEEEEEEecC
Q 015588 2 RQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIF----DQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIK 75 (404)
Q Consensus 2 ~p~~~~~~~a~~~~G~~~~~~~~~d~~~g~~~g~~~~----~~~g~R~s~~~-~l~-~~~r~nl~v~~~a~V~rv~~~~~ 75 (404)
+|+.+.|.++++++|++ .+ .|.+.|...|.+.+ +.+|.|+|++. ||. .+.++|++|++++.|+||+++++
T Consensus 187 ~~~~~~~~~a~~~~G~~-~~---~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~~~~ 262 (587)
T 1gpe_A 187 SPIMKALMNTVSALGVP-VQ---QDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQT 262 (587)
T ss_dssp CTHHHHHHHHHHHTTCC-BS---CCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHcCCC-cC---CCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEECCC
Confidence 46789999999999984 43 24455555554332 24789999986 884 66789999999999999999853
Q ss_pred CCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc--------CCCceeeecCcccCCcCcCCCCc
Q 015588 76 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMN 147 (404)
Q Consensus 76 ~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG--------~~gI~~~~d~p~VG~nl~DH~~~ 147 (404)
+ ++.+|+||++.+.+|+.++++ |+|+||||||+|+||+|||+|| ++||++++||| ||+|||||+..
T Consensus 263 ~-~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH~~~ 336 (587)
T 1gpe_A 263 A-SGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQTTT 336 (587)
T ss_dssp T-TEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCCEEE
T ss_pred C-CCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcCccc
Confidence 1 113899999985467777775 6699999999999999999999 89999999999 99999999998
Q ss_pred eeeeeCCCCccchhhhhhc-cchhhhhHHhhccccccCCCCCCCcccccCcccCccccCCCCCC--ChHHHHHHHhhh--
Q 015588 148 AIFVPSPVPVEVSLIQVVG-ITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQR--TPEAIAEAIENM-- 222 (404)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-- 222 (404)
.+.+.++.+... ...... ......|.....|+ +... ......+....... .. ..... .+++. ..+...
T Consensus 337 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~-~~~~--~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~~~~~~~ 409 (587)
T 1gpe_A 337 TVSSRASSAGAG-QGQAVFFANFTETFGDYAPQA-RDLL--NTKLDQWAEETVAR-GG-FHNVTALKVQYE-NYRNWLLD 409 (587)
T ss_dssp EEEEEECGGGCS-BCEEEEEEEHHHHHGGGHHHH-HHHH--HHSHHHHHHHHHHT-TS-CSCHHHHHHHHH-HHHHHHHH
T ss_pred ceEEEeCCCccc-ccchHHHHHHHHHHHhCCCCC-cccc--ccceeeEeeccccc-cc-ccccccccccHH-HHhhhccC
Confidence 877766543210 000000 00111222222222 1000 00000011000000 00 00000 01111 111110
Q ss_pred ccCCC-C----CCCcceeeeeecccccceEEEeccCCCCCCC-eeeCCCCCChhhHHHHHHHHHHHHHHHcccccccccc
Q 015588 223 KALDD-P----AFRGGFILEKVMGPVSTGHLELRTRNPNDNP-SVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKY 296 (404)
Q Consensus 223 ~~~~~-~----~~~~~~~~~~~~~P~srG~V~l~s~dp~~~P-~I~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~ 296 (404)
...+. . ......+...+++|.|||+|+|+|+||++.| +|+++|+.+|.|++.++++++++++|+++++++.+..
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~ 489 (587)
T 1gpe_A 410 EDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFA 489 (587)
T ss_dssp SCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEE
T ss_pred CCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhcc
Confidence 00000 0 0112345567889999999999999999999 9999999999999999999999999999998887763
Q ss_pred ccCchhhhhccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccccCCC-----ceecCCCeeeeccCceEeeccccC
Q 015588 297 ESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVIDGSTFY 371 (404)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG-----~VVD~~lrV~Gv~nLrVvDaSv~P 371 (404)
.+. . |+...+ ...+|++|++|+|+...+.+|++|||||| +|||++|||||++|||||||||||
T Consensus 490 ~~~-~----------pg~~~~-~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLrVvDaSv~P 557 (587)
T 1gpe_A 490 GET-L----------PGYNLV-QNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSIPP 557 (587)
T ss_dssp EEE-E----------SGGGSC-TTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCS
T ss_pred ccc-C----------CCcccc-CCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcEEeeeccCC
Confidence 221 0 110000 12689999999999999999999999999 599999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhh
Q 015588 372 YSPGTNPQATVMMLGRYMGVRILSE 396 (404)
Q Consensus 372 ~~~~~np~~t~~aiaer~A~~ii~~ 396 (404)
+++++||++|+||||||+|+.|+++
T Consensus 558 ~~~~~Np~~ti~aiAeraAd~I~~~ 582 (587)
T 1gpe_A 558 TQVSSHVMTIFYGMALKVADAILDD 582 (587)
T ss_dssp SCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988776654
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=4.2e-59 Score=478.10 Aligned_cols=336 Identities=23% Similarity=0.305 Sum_probs=242.8
Q ss_pred chhHHHHHHHHHHcCCcCCCCCcccCCCceeeEEEE---ECCCCceecHHH-hh-h-hcCCCCeEEecCcEEEEEEEecC
Q 015588 2 RQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTI---FDQNGQRHTAAD-LL-E-YANPSGLTLLLHASVHKVLFRIK 75 (404)
Q Consensus 2 ~p~~~~~~~a~~~~G~~~~~~~~~d~~~g~~~g~~~---~~~~g~R~s~~~-~l-~-~~~r~nl~v~~~a~V~rv~~~~~ 75 (404)
.|+.+.|.++++++|+. .+. +.+.+...+.+. .+..|.|+++.. |+ + ...|+||+|+++++|+||+++++
T Consensus 167 ~p~~~~~~~~~~~~G~~-~~~---~~~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~ 242 (526)
T 3t37_A 167 SPLARAFIEAGASLGLP-RLE---GHNSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN 242 (526)
T ss_dssp CHHHHHHHHHHHHTTCC-BCS---SSCSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT
T ss_pred CHHHHHHHHHHHHcCCC-ccc---CCCCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC
Confidence 47889999999999984 332 223332222111 125788888876 55 3 45799999999999999999875
Q ss_pred CCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc--------CCCceeeecCcccCCcCcCCCCc
Q 015588 76 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMN 147 (404)
Q Consensus 76 ~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG--------~~gI~~~~d~p~VG~nl~DH~~~ 147 (404)
+|+||++... +..+++ .+||||||||+|+||||||+|| ++||+++.|+|+||+|||||+..
T Consensus 243 -----~a~gv~~~~~-~~~~~~-----~a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~ 311 (526)
T 3t37_A 243 -----QVRSLEVVGR-QGSAEV-----FADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLG 311 (526)
T ss_dssp -----EEEEEEEEET-TEEEEE-----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEE
T ss_pred -----eEEEEEEEec-CceEEE-----eecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCcccccccccccc
Confidence 7999999873 445555 4699999999999999999999 78999999999999999999865
Q ss_pred eee-eeCCCCccchhhhhhccchhhhhHHhhccccccCCCCCCCcccccCcccCccccCCCCCCChHHHHHHHhhhccCC
Q 015588 148 AIF-VPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALD 226 (404)
Q Consensus 148 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (404)
... +....+....... .. ....|.. .+. +... ....+.+. +...+... + ....
T Consensus 312 ~~~~~~~~~~~~~~~~~--~~-~~~~~~~--~~~-~~~~--~~~~~~~~------~~~~~~~~---~-------~~~~-- 365 (526)
T 3t37_A 312 AGNLYAARKPVPPSRLQ--HS-ESMAYMR--ADS-FTAA--GQPEIVVG------CGVAPIVS---E-------SFPA-- 365 (526)
T ss_dssp EEEEEEESSCCCCCSSC--SE-EEEEEEC--SSC-SSCC--SSCCEEEE------EESSCCCC---T-------TSCC--
T ss_pred ceeEEeccCCcchHhhc--ch-hhhhhhh--ccc-cccc--CCcceeee------cccccccc---c-------cccc--
Confidence 443 2322221110000 00 0000100 000 0000 00000000 00000000 0 0000
Q ss_pred CCCCCcceeeeeecccccceEEEeccCCCCCCCeeeCCCCCChhhHHHHHHHHHHHHHHHccccccccccccCchhhhhc
Q 015588 227 DPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVN 306 (404)
Q Consensus 227 ~~~~~~~~~~~~~~~P~srG~V~l~s~dp~~~P~I~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 306 (404)
........+...+++|.|||+|+++++||.+.|.|+++|+.++.|++.++++++.+++++++++++.+...+
T Consensus 366 ~~~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~-------- 437 (526)
T 3t37_A 366 PAAGSAYSLLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE-------- 437 (526)
T ss_dssp CCTTSEEEEEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE--------
T ss_pred ccCCcceeeeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc--------
Confidence 001122345667899999999999999999999999999999999999999999999999998888776432
Q ss_pred cccCCCCCCCCCCCCChHHHHHHHHhhcccccccccccCCC----ceecCCCeeeeccCceEeeccccCCCCCCChHHHH
Q 015588 307 MTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATV 382 (404)
Q Consensus 307 ~~~~~~~~~~p~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG----~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~ 382 (404)
..|....+++++++|+|+...+.||++|||||| +|||++|||||++|||||||||||+++++||++|+
T Consensus 438 --------~~pg~~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti 509 (526)
T 3t37_A 438 --------LLPGTPNSAAEMDDFIARSVITHHHPCGTCRMGKDPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAV 509 (526)
T ss_dssp --------CSSCCCCSHHHHHHHHHHHEEECSCCBCTTCBCSSTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHH
T ss_pred --------cCCCCCCCHHHHHHHHHhcCccCcccCccccCCCCCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHH
Confidence 234445789999999999999999999999999 69999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 015588 383 MMLGRYMGVRIL 394 (404)
Q Consensus 383 ~aiaer~A~~ii 394 (404)
||||||+||+.-
T Consensus 510 ~aiAEkaAd~~~ 521 (526)
T 3t37_A 510 LAIAETFARQYH 521 (526)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999998653
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.2e-58 Score=476.01 Aligned_cols=340 Identities=27% Similarity=0.413 Sum_probs=247.4
Q ss_pred chhHHHHHHHHHHcCCcCCCCCcccCCCce--eeEEEE---ECC-CCceecHHH-hhh-hcCCCCeEEecCcEEEEEEEe
Q 015588 2 RQWQSAVRDGLVEVGVLPYNGFTYDHMYGT--KIGGTI---FDQ-NGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFR 73 (404)
Q Consensus 2 ~p~~~~~~~a~~~~G~~~~~~~~~d~~~g~--~~g~~~---~~~-~g~R~s~~~-~l~-~~~r~nl~v~~~a~V~rv~~~ 73 (404)
.|..+.|.++++++|+ +.++ .+.+. ..|... .+. +|.|+++.. ||. +..++|++|++++.|+||+++
T Consensus 164 ~~~~~~~~~a~~~~G~-~~~d----~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~ 238 (546)
T 2jbv_A 164 DPTGVALLDACEQAGI-PRAK----FNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFD 238 (546)
T ss_dssp CHHHHHHHHHHHHTTC-CBCC----SSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEEC
T ss_pred CHHHHHHHHHHHHCCC-CccC----CCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEEC
Confidence 4678899999999998 4432 22222 223322 235 899999876 877 446899999999999999998
Q ss_pred cCCCCCCeEEEEEEEeCC-CceeEEEeecCCCceEEEecCCcCchHHHHhhc--------CCCceeeecCcccCCcCcCC
Q 015588 74 IKGKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDN 144 (404)
Q Consensus 74 ~~~~~~~~a~GV~~~~~~-g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG--------~~gI~~~~d~p~VG~nl~DH 144 (404)
+++ +++||++.+.. |+.++++ ++|+||||||+|+||+|||+|| ++||++++|+|+||+|||||
T Consensus 239 ~~~----~~~GV~~~~~~~g~~~~i~----A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH 310 (546)
T 2jbv_A 239 ADR----RCTGVDIVDSAFGHTHRLT----ARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDH 310 (546)
T ss_dssp TTS----BEEEEEEESSTTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCC
T ss_pred CCC----eEEEEEEEECCCCcEEEEE----eCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhC
Confidence 632 79999998621 7767775 6679999999999999999999 78999999999999999999
Q ss_pred CCceeeeeCCCCccchhhhhhccchhhhhHHhhccccccCCCCCCCcccccCcccCccccCCCCCCChHHHHHHHhhhcc
Q 015588 145 PMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKA 224 (404)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (404)
+...+.+.++.+..... ........|.....+ . . ...+.+. ..+.... .. +. ...
T Consensus 311 ~~~~~~~~~~~~~~~~~---~~~~~~~~f~~~~~~--~----~-~p~~~~~--------~~~~~~~-~~----~~-~~g- 365 (546)
T 2jbv_A 311 PEGVVQFEAKQPMVAES---TQWWEIGIFTPTEDG--L----D-RPDLMMH--------YGSVPFD-MN----TL-RHG- 365 (546)
T ss_dssp EECCEEEEESSCCCSCC---SSSCCEEEEECSSTT--C----S-SCSEEEE--------EESSCCC-TT----TG-GGT-
T ss_pred ccceEEEEecCCCcccc---cchhheEEEEecCCC--C----C-CCceEEE--------ecccccc-cc----cc-ccC-
Confidence 98877776654321000 000000011100000 0 0 0000000 0000000 00 00 000
Q ss_pred CCCCCCCcceeeeeecccccceEEEeccCCCCCCCeeeCCCCCChh--hHHHHHHHHHHHHHHHccccccccccccCchh
Q 015588 225 LDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPE--DLQRCVQGISTIEKIIESKSFSKFKYESMSVP 302 (404)
Q Consensus 225 ~~~~~~~~~~~~~~~~~P~srG~V~l~s~dp~~~P~I~~~~~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 302 (404)
.. .......+...+++|.|||+|+|+|+||++.|.|+++|+.+|. |++.++++++++++++++++++.+...+
T Consensus 366 ~~-~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~---- 440 (546)
T 2jbv_A 366 YP-TTENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRE---- 440 (546)
T ss_dssp CC-CCSSEEEEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEE----
T ss_pred cc-CCCCeEEEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhccccc----
Confidence 00 0111234556789999999999999999999999999999999 9999999999999999999888765322
Q ss_pred hhhccccCCCCCCCCC-CCCChHHHHHHHHhhcccccccccccCCC------ceecCCCeeeeccCceEeeccccCCCCC
Q 015588 303 ILVNMTASAPVNLLPR-HSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVIDGSTFYYSPG 375 (404)
Q Consensus 303 ~~~~~~~~~~~~~~p~-~~~~d~~~~~~i~~~~~~~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~ 375 (404)
..|. ...+|++|++|+|+...+.+|++|||||| +|||++|||||++|||||||||||++++
T Consensus 441 ------------~~p~~~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~ 508 (546)
T 2jbv_A 441 ------------LSPGVEAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVT 508 (546)
T ss_dssp ------------EESCTTCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCS
T ss_pred ------------ccCCCCCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCC
Confidence 1121 35789999999999999999999999999 7999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHhh
Q 015588 376 TNPQATVMMLGRYMGVRILSE 396 (404)
Q Consensus 376 ~np~~t~~aiaer~A~~ii~~ 396 (404)
+||++|+||||||+|+.|+++
T Consensus 509 ~np~~ti~aiAeraAd~I~~~ 529 (546)
T 2jbv_A 509 VNPNITVMMIGERCADLIRSA 529 (546)
T ss_dssp SCCHHHHHHHHHHHHHHC---
T ss_pred cchHHHHHHHHHHHHHHHHhh
Confidence 999999999999988766554
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=2.2e-53 Score=437.59 Aligned_cols=349 Identities=21% Similarity=0.227 Sum_probs=234.6
Q ss_pred hhHHHHHHHHHHcCCcCCCCCcccCCCceeeEEEE---ECCCCceecHHH-hhh-hcCCCCeEEecCcEEEEEEEecCCC
Q 015588 3 QWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTI---FDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGK 77 (404)
Q Consensus 3 p~~~~~~~a~~~~G~~~~~~~~~d~~~g~~~g~~~---~~~~g~R~s~~~-~l~-~~~r~nl~v~~~a~V~rv~~~~~~~ 77 (404)
+....|.++++++|+... ....+.+. ...|... .+++|.|+++.. |+. +.+++|++|++++.|++|+++++
T Consensus 152 ~~~~~~~~a~~~~G~~~~-~~~~~~~~-~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-- 227 (546)
T 1kdg_A 152 QSFNVVSQLLKGQGYNQA-TINDNPNY-KDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-- 227 (546)
T ss_dssp HHHHHHHHHHHTTTCEEC-CGGGSTTC-CTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT--
T ss_pred HHHHHHHHHHHHCCCCcC-CccCCcCC-CCcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC--
Confidence 456778999999998422 11111111 1112221 126899999876 776 55678999999999999999853
Q ss_pred CCCeEEEEEEEeC-CCcee--EEEeecCCCceEEEecCCcCchHHHHhhc--------CC------Cceee-----ecCc
Q 015588 78 ARPVAHGVVFRDA-TGAKH--RAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AH------NITVV-----LDQP 135 (404)
Q Consensus 78 ~~~~a~GV~~~~~-~g~~~--~v~~~~~a~keVILsAGai~TP~LLl~SG--------~~------gI~~~-----~d~p 135 (404)
+++||++.+. +|+.+ +++ ++|+||||||+++||+|||+|| ++ ||+++ +|+|
T Consensus 228 ---~~~gV~~~~~~~g~~~~~~v~----~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp 300 (546)
T 1kdg_A 228 ---QILGVQTNDPTLGPNGFIPVT----PKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP 300 (546)
T ss_dssp ---EEEEEEESCTTSSGGGEEEEE----EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC
T ss_pred ---EEEEEEEEecCCCceeEEEEE----eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC
Confidence 7999999753 36533 343 6899999999999999999999 23 68874 8999
Q ss_pred ccCCcCcCCCCceeeeeCCCC-ccchhhhhh-c--cchhhhhHHhhccccccCCCCCCCcccccCcccCccccCCCCCCC
Q 015588 136 LVGQGMSDNPMNAIFVPSPVP-VEVSLIQVV-G--ITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRT 211 (404)
Q Consensus 136 ~VG~nl~DH~~~~~~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (404)
||+|||||+...+.+..+.. ......... . ......|.....|+ +... ....+++..... .... .
T Consensus 301 -VG~nL~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~~~~~~~~----~~~~--~ 369 (546)
T 1kdg_A 301 -VGMNAQDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGV-FAGA---SPKLNFWRAYSG----SDGF--T 369 (546)
T ss_dssp -TTTTBBCCCCEEEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSG-GGSC---SCCEEEEEEEEC----TTSC--E
T ss_pred -cccCcccCcceeEEEecCCcccccchhhhhcchhHHHHHHHHHcCCcc-cccC---CcceEEEEccCC----CCcc--h
Confidence 99999999998877663221 000100000 0 01123454444554 2110 000111111000 0000 0
Q ss_pred hHHHHHHHhh----hcc-CCCCCCCcceeeeeeccc-ccceEEEeccCCCCCCCeeeCCCCCChhhHHHHHHHHHHHHHH
Q 015588 212 PEAIAEAIEN----MKA-LDDPAFRGGFILEKVMGP-VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKI 285 (404)
Q Consensus 212 ~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~P-~srG~V~l~s~dp~~~P~I~~~~~~~~~D~~~~~~~~~~~~~i 285 (404)
..+. ..+.. ... .+........+...+++| .|||+|+|+|+| ..|.|+++|+.+|.|++.|++++++++++
T Consensus 370 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~ 446 (546)
T 1kdg_A 370 RYAQ-GTVRPGAASVNSSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSN 446 (546)
T ss_dssp EEEE-EEEEESCSCCCCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTT
T ss_pred hhhh-heecccccccccccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHH
Confidence 0000 00000 000 000000123455567888 999999999987 56789999999999999999999999999
Q ss_pred HccccccccccccCchhhhhccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccccCCC-----ceecCCCeeeecc
Q 015588 286 IESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVD 360 (404)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG-----~VVD~~lrV~Gv~ 360 (404)
+++.+...+. .|....+|+++++|++....+.+|++|||||| +|||++|||||++
T Consensus 447 ~~~~~~~~~~--------------------~p~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~ 506 (546)
T 1kdg_A 447 IGSIPGLTMI--------------------TPDVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTN 506 (546)
T ss_dssp GGGSTTCEEE--------------------ESCTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCS
T ss_pred hcCCCccccc--------------------CCCCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCC
Confidence 9876533211 11123578899999999889999999999999 6999999999999
Q ss_pred CceEeeccccCCCCCCChHHHHHHHHHHHHHHHHhh
Q 015588 361 ALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 396 (404)
Q Consensus 361 nLrVvDaSv~P~~~~~np~~t~~aiaer~A~~ii~~ 396 (404)
|||||||||||+++++||++|+||||||+|+.|+++
T Consensus 507 nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~ 542 (546)
T 1kdg_A 507 NLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILAL 542 (546)
T ss_dssp SEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHS
T ss_pred CcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999988766543
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=4.6e-49 Score=401.36 Aligned_cols=312 Identities=19% Similarity=0.207 Sum_probs=209.7
Q ss_pred hhHHHHHHHHHHcCCc----CCCCCcccCCC-----------ceeeEEEE-ECCCCceecHHH-hhh-hcCCCCeEEecC
Q 015588 3 QWQSAVRDGLVEVGVL----PYNGFTYDHMY-----------GTKIGGTI-FDQNGQRHTAAD-LLE-YANPSGLTLLLH 64 (404)
Q Consensus 3 p~~~~~~~a~~~~G~~----~~~~~~~d~~~-----------g~~~g~~~-~~~~g~R~s~~~-~l~-~~~r~nl~v~~~ 64 (404)
|..+.|.++++++|+. |.+ .|.+. +..+|.|. .|++| |+++.. |++ +.+++|++|+++
T Consensus 167 p~~~~~~~a~~~~G~~~~~~p~~---~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~ 242 (504)
T 1n4w_A 167 KFARVSREQAGKAGLGTVFVPNV---YDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTL 242 (504)
T ss_dssp HHHHHHHHHHHHTTCCEEECCBS---BCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEES
T ss_pred hHHHHHHHHHHHcCCCCccCCcc---cccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeC
Confidence 5678899999999984 232 12111 11112121 24789 999765 876 556889999999
Q ss_pred cEEEEEEEecCCCCCCeEEEEEEEeCCC---ceeEEEeecCCCceEEEecCCcCchHHHHhhc-CCCceeeecCcccCCc
Q 015588 65 ASVHKVLFRIKGKARPVAHGVVFRDATG---AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPLVGQG 140 (404)
Q Consensus 65 a~V~rv~~~~~~~~~~~a~GV~~~~~~g---~~~~v~~~~~a~keVILsAGai~TP~LLl~SG-~~gI~~~~d~p~VG~n 140 (404)
++|+||++++++ .+++||++.+.+| +.+++. +|+||||||+|+||+|||+|| .-||+++ +++||+|
T Consensus 243 ~~V~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~v~-----A~~VIlaaG~~~s~~lL~~Sg~ig~i~~~--~~~VG~n 312 (504)
T 1n4w_A 243 HQVKTIRQTKDG---GYALTVEQKDTDGKLLATKEIS-----CRYLFLGAGSLGSTELLVRARDTGTLPNL--NSEVGAG 312 (504)
T ss_dssp EEEEEEEECTTS---SEEEEEEEECTTCCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSSTTC--CTTTTCC
T ss_pred CEEEEEEECCCC---CEEEEEEEeCCCCccceeEEEe-----eCEEEEccCCCCCHHHHHhccccCCCCCC--Chhhccc
Confidence 999999998632 3899999986456 445553 579999999999999999999 6678866 4589999
Q ss_pred CcCCCCceeeeeCCCCccchhhhhhccchhhhhHHhhccccccCCCCCCCcccccCcccCccccCCCCCCChHHHHHHHh
Q 015588 141 MSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIE 220 (404)
Q Consensus 141 l~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (404)
||||+...+.+..... . ..+ .+ ..+.. ...+....... .| ... +
T Consensus 313 l~dh~~~~~~~~~~~~-~-----~~~-----~~---~~~~~---------~~~~~~~~~~~---~~------~~~---~- 356 (504)
T 1n4w_A 313 WGPNGNIMTARANHMW-N-----PTG-----AH---QSSIP---------ALGIDAWDNSD---SS------VFA---E- 356 (504)
T ss_dssp BBCTTCEEEEEECCTT-C-----CCC-----SC---CCSSC---------CEEEEECCSST---TC------EEE---E-
T ss_pred cccCCcceeeeccCCC-C-----ccc-----Cc---CCCcc---------EEEEeccCCCC---Cc------eEE---E-
Confidence 9999976654332110 0 000 00 00000 00000000000 00 000 0
Q ss_pred hhccCCCCCCCcceeeeeecccccceEEEeccCCCCCCCeeeCCCCCChhhHHHHHHHHH-HHHHHHccccccccccccC
Q 015588 221 NMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYESM 299 (404)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~P~srG~V~l~s~dp~~~P~I~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~ 299 (404)
.. ..+........+...+.+|.|||+|+|+|+|| .|+++|+.++ | +.|+++++ ++++|+++.+. +..
T Consensus 357 ~~-~~~~~~~~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~--- 424 (504)
T 1n4w_A 357 IA-PMPAGLETWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--IYR--- 424 (504)
T ss_dssp EE-CCCCSSCCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBC---
T ss_pred ec-cCChHHHhhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--CcC---
Confidence 00 00000001123455677899999999998765 6999999999 9 78999999 99999987653 110
Q ss_pred chhhhhccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccccCCCceecCCCeeeeccCceEeeccccCCCCCCChH
Q 015588 300 SVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQ 379 (404)
Q Consensus 300 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~ 379 (404)
.....++ +++| ...+.+|++||||||+|||++|||||++|||||||||||+++++||+
T Consensus 425 ------------------~~~~~~~-~~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~ 482 (504)
T 1n4w_A 425 ------------------YDLFGTQ-LKAF---ADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPF 482 (504)
T ss_dssp ------------------CSSSSSS-CCSE---ECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECSGGGSCSCCSSCSH
T ss_pred ------------------Cchhhhh-hhhh---ccCccccccCCceeeeEECCCCeEeccCCeEEeeccccCCCCCcChH
Confidence 0000000 1111 35678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 015588 380 ATVMMLGRYMGVRILSERL 398 (404)
Q Consensus 380 ~t~~aiaer~A~~ii~~~~ 398 (404)
+|+||||||+|++|+++..
T Consensus 483 ~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 483 VTITALAERNVERIIKQDV 501 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999988776644
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=1.2e-47 Score=391.02 Aligned_cols=312 Identities=17% Similarity=0.164 Sum_probs=207.1
Q ss_pred chhHHHHHHHHHHcCCc----CCCCCcccCCC-----------ceeeEEEE-ECCCCceecHHH-hhh-hcCCCCeEEec
Q 015588 2 RQWQSAVRDGLVEVGVL----PYNGFTYDHMY-----------GTKIGGTI-FDQNGQRHTAAD-LLE-YANPSGLTLLL 63 (404)
Q Consensus 2 ~p~~~~~~~a~~~~G~~----~~~~~~~d~~~-----------g~~~g~~~-~~~~g~R~s~~~-~l~-~~~r~nl~v~~ 63 (404)
.|+.+.|.++++++|+. |.+ .|.+. +..+|.|. .|++| |+++.. ||+ +.+++|++|++
T Consensus 171 ~~~~~~~~~a~~~~G~~~~~~p~~---~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~~~l~~a~~~~n~~i~~ 246 (507)
T 1coy_A 171 YKFARTGRKTAQRSGFTTAFVPNV---YDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDKTYLAQAAATGKLTITT 246 (507)
T ss_dssp GHHHHHHHHHHHHTTCCEEECCBS---BCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTTTHHHHHHHTTCEEEEC
T ss_pred chHHHHHHHHHHHcCCCCccCCcc---cccCcccccCCCcccCccccccccccCCCC-CcChHHHHHHHHHhcCCcEEEe
Confidence 36778899999999983 232 12111 11112111 24789 999876 876 55688999999
Q ss_pred CcEEEEEEEecCCCCCCeEEEEEEEeCCCc---eeEEEeecCCCceEEEecCCcCchHHHHhhc-CCCceeeecCcccCC
Q 015588 64 HASVHKVLFRIKGKARPVAHGVVFRDATGA---KHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPLVGQ 139 (404)
Q Consensus 64 ~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~---~~~v~~~~~a~keVILsAGai~TP~LLl~SG-~~gI~~~~d~p~VG~ 139 (404)
++.|+||++++++ .+++||++.+.+|+ .++++ +++||||||+|+||+|||+|| .-++| +.+++||+
T Consensus 247 ~~~v~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~~~-----A~~VIlaaGa~~sp~lL~~Sg~iG~lp--nl~d~VG~ 316 (507)
T 1coy_A 247 LHRVTKVAPATGS---GYSVTMEQIDEQGNVVATKVVT-----ADRVFFAAGSVGTSKLLVSMKAQGHLP--NLSSQVGE 316 (507)
T ss_dssp SEEEEEEEECSSS---SEEEEEEEECTTSCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSST--TSCTTTTC
T ss_pred CCEEEEEEECCCC---CEEEEEEEeCCCCcccccEEEE-----eCEEEEccCccCCHHHHHhcccCCCCC--ccChhhCC
Confidence 9999999998632 37999999864563 45554 469999999999999999998 43455 33468999
Q ss_pred cCcCCCCceeeee-CCCCccchhhhhhccchhhhhHHhhccccccCCCCCCCcccccCcccCccccCCCCCCChHHHHHH
Q 015588 140 GMSDNPMNAIFVP-SPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEA 218 (404)
Q Consensus 140 nl~DH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (404)
||+||+...+... +... ..++ +... ........+.. +. .+.+.
T Consensus 317 ~l~~h~~~~~~~~~~~~~--------------------~~~~-~~~~-~~~~~~~~~~~--------~~---~~~~~--- 360 (507)
T 1coy_A 317 GWGNNGNIMVGRANHMWD--------------------ATGS-KQAT-IPTMGIDNWAD--------PT---APIFA--- 360 (507)
T ss_dssp CBBCTTEEEEEEECCTTS--------------------CCCS-CCCS-SCCEEEECTTC--------TT---SCEEE---
T ss_pred ccccCCcccccccccccc--------------------cccc-cCCC-cceEEEeccCC--------CC---CCcEE---
Confidence 9999986432211 1000 0000 0000 00000000000 00 00000
Q ss_pred HhhhccCCCCCCCcceeeeeecccccceEEEeccCCCCCCCeeeCCCCCChhhHHHHHHHHH-HHHHHHccccccccccc
Q 015588 219 IENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYE 297 (404)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~l~s~dp~~~P~I~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~ 297 (404)
+ .. ..+........+...+.+|.|||+|+|+|+|| .|+++|+.++ | +.++++++ ++++++++.+. +...
T Consensus 361 ~-~~-~~~~~~~~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~ 430 (507)
T 1coy_A 361 E-IA-PLPAGLETYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IYRT 430 (507)
T ss_dssp E-EE-CCCCSSCCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCS
T ss_pred E-ec-cCCHHHhhheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cccC
Confidence 0 00 00000001123445667899999999998765 8999999999 8 57888888 99999987652 2211
Q ss_pred cCchhhhhccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccccCCCceecCCCeeeeccCceEeeccccCCCCCCC
Q 015588 298 SMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTN 377 (404)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~n 377 (404)
+ ...+|+ ++| ...+.+|++||||||+|||++|||||++|||||||||||+++++|
T Consensus 431 ~--------------------~~~~d~--~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~N 485 (507)
T 1coy_A 431 D--------------------LFGVYY--KTW---GDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVN 485 (507)
T ss_dssp S--------------------CC--CC--CSS---BCSEESCCBCSSCTTTTSCTTSBCTTSTTEEECSGGGSCSCCSSC
T ss_pred c--------------------ccccch--hhh---cccccccccCCcchhheECCCCeEeccCCeEEeechhccCCCCcC
Confidence 0 012222 233 456789999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhh
Q 015588 378 PQATVMMLGRYMGVRILSERL 398 (404)
Q Consensus 378 p~~t~~aiaer~A~~ii~~~~ 398 (404)
|++|+||||||+|++|+++++
T Consensus 486 p~~ti~alAeraAd~I~~~~~ 506 (507)
T 1coy_A 486 PFVTITALAERNMDKIISSDI 506 (507)
T ss_dssp SHHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999988765
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=4.4e-41 Score=349.75 Aligned_cols=296 Identities=14% Similarity=0.123 Sum_probs=203.1
Q ss_pred CCCceecHHH-hhh-h------cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEe
Q 015588 40 QNGQRHTAAD-LLE-Y------ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVS 110 (404)
Q Consensus 40 ~~g~R~s~~~-~l~-~------~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILs 110 (404)
....|+++.. ++. . ..++|++|++++.|++|++++++ .+++||++.+ .+|+.+++ .+++||||
T Consensus 248 ~~~~r~s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~~---~~v~GV~~~~~~~g~~~~i-----~A~~VIla 319 (623)
T 3pl8_A 248 PTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNALN---SEIESLHIHDLISGDRFEI-----KADVYVLT 319 (623)
T ss_dssp TTEEEECCHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECTTS---SCEEEEEEEETTTCCEEEE-----CEEEEEEC
T ss_pred CCccccchHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEECCC---CEEEEEEEEEcCCCcEEEE-----ECCEEEEc
Confidence 3456887765 665 3 44579999999999999998642 3799999987 45776766 46899999
Q ss_pred cCCcCchHHHHhhc--------CCCceeeecCcccCCcCcCCCCceeeeeCCCCccchhhhhhccchhhhhHHhhccccc
Q 015588 111 AGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENF 182 (404)
Q Consensus 111 AGai~TP~LLl~SG--------~~gI~~~~d~p~VG~nl~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 182 (404)
+|++.||+||++|| .+||++ |+|+||+|||||+...+.+.++.+....+...+... .| ..|..+
T Consensus 320 aG~~~s~~lL~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~---g~---~g~~~~ 391 (623)
T 3pl8_A 320 AGAVHNTQLLVNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIR---GT---PGELTY 391 (623)
T ss_dssp SCTTHHHHHHHTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCEEE---SC---TTSTTC
T ss_pred CCCcCCHHHHHhcCCCccccccccCCCC--CCcccccchhhCcCceEEEEECCccccccccccccc---cc---CCCcce
Confidence 99999999999999 778987 999999999999998888777654211110000000 00 000000
Q ss_pred cCCCCCCCcccccCcccCccccCCCCCCChHHHH----HHHhh----h----ccC---------CCCC---------CC-
Q 015588 183 AGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIA----EAIEN----M----KAL---------DDPA---------FR- 231 (404)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~----~~~---------~~~~---------~~- 231 (404)
.. .... ..|.....+.+.. .+... + .++ ..+. +.
T Consensus 392 ~~--------~~~~-------~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (623)
T 3pl8_A 392 SV--------TYTP-------GASTNKHPDWWNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSY 456 (623)
T ss_dssp EE--------ECCT-------TCTTCSSCHHHHHHHHHHHHHCTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCC
T ss_pred ec--------cccc-------CcccccCCchhhhhhhhhhhcccccccccccccccccccccccccCcchhhhhhhhccc
Confidence 00 0000 0000000000000 00000 0 000 0000 00
Q ss_pred ------------cceeeeeecccccceEEEecc--CCCCCCCeeeCCCCCChh-hHHHHHHHHHHHHHHHcccccccccc
Q 015588 232 ------------GGFILEKVMGPVSTGHLELRT--RNPNDNPSVTFNYFKEPE-DLQRCVQGISTIEKIIESKSFSKFKY 296 (404)
Q Consensus 232 ------------~~~~~~~~~~P~srG~V~l~s--~dp~~~P~I~~~~~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~ 296 (404)
..........|.++|+|+|++ +|+++.|+++++|..++. |++.+.++++.+++++++.+......
T Consensus 457 ~~~~~~~~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~ 536 (623)
T 3pl8_A 457 GAVQQSIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGS 536 (623)
T ss_dssp SCCCCSSCGGGEEEEEEEECCCCCTTCEEEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTS
T ss_pred cccccccccceEEEEEEEEeeccCCCCEEEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCc
Confidence 001223456799999999987 899999999999999999 99999999999999998765433210
Q ss_pred ccCchhhhhccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccccCCC------cee-cCCCeeeeccCceEeeccc
Q 015588 297 ESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVV-DHDYKVLGVDALRVIDGST 369 (404)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~i~~~~~~~~H~~GTcrMG------~VV-D~~lrV~Gv~nLrVvDaSv 369 (404)
. + .+ ....+.+|++|||||| +|| |++|||||++||||+|+|+
T Consensus 537 ~-------------------~-------~~-----~~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~ 585 (623)
T 3pl8_A 537 L-------------------P-------QF-----MEPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGN 585 (623)
T ss_dssp C-------------------S-------EE-----CCTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGG
T ss_pred h-------------------h-------hc-----cCCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCc
Confidence 0 0 00 0124579999999999 586 9999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHhhh
Q 015588 370 FYYSPGTNPQATVMMLGRYMGVRILSER 397 (404)
Q Consensus 370 ~P~~~~~np~~t~~aiaer~A~~ii~~~ 397 (404)
||+++++||++|+||||+|+|++|+++.
T Consensus 586 ~p~~~~~np~~t~~a~a~r~a~~i~~~~ 613 (623)
T 3pl8_A 586 IPTAYGANPTLTAMSLAIKSCEYIKQNF 613 (623)
T ss_dssp CCSCCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998887764
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.77 E-value=0.0019 Score=65.03 Aligned_cols=63 Identities=14% Similarity=0.280 Sum_probs=48.1
Q ss_pred hhcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcC-chHHHHhh
Q 015588 52 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG-SPQLLMLS 123 (404)
Q Consensus 52 ~~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~-TP~LLl~S 123 (404)
..+.+.+++|++++.|++|+.++++ +++||++.+ +|+.+++. ++|.||||+|.+. +|.+|..-
T Consensus 210 ~~~~~~Gv~i~~~t~v~~L~~~~~g----~v~GV~~~~-~g~~~~i~----A~k~VVlAtGG~~~n~~m~~~~ 273 (510)
T 4at0_A 210 ETAEKLGVRAEYDMRVQTLVTDDTG----RVVGIVAKQ-YGKEVAVR----ARRGVVLATGSFAYNDKMIEAH 273 (510)
T ss_dssp HHHHHTTCEEECSEEEEEEEECTTC----CEEEEEEEE-TTEEEEEE----EEEEEEECCCCCTTCHHHHHHH
T ss_pred HHHHHcCCEEEecCEeEEEEECCCC----cEEEEEEEE-CCcEEEEE----eCCeEEEeCCChhhCHHHHHHh
Confidence 3333458999999999999998443 799999976 56555664 4479999999998 77776543
No 13
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=94.83 E-value=0.044 Score=55.89 Aligned_cols=61 Identities=16% Similarity=0.250 Sum_probs=45.6
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcC-chHHHHhh
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG-SPQLLMLS 123 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~-TP~LLl~S 123 (404)
+.+.+++|++++.|++|+.++++ +++||++.+.+|+..++. +|.||||+|.+. .+.+|..-
T Consensus 265 ~~~~gv~i~~~t~v~~l~~~~~g----~v~GV~~~~~~G~~~~i~-----A~~VVlAtGg~~~~~~~~~~~ 326 (572)
T 1d4d_A 265 AVKRGTDIRLNSRVVRILEDASG----KVTGVLVKGEYTGYYVIK-----ADAVVIAAGGFAKNNERVSKY 326 (572)
T ss_dssp HHHTTCEEESSEEEEEEEEC--C----CEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCHHHHHHH
T ss_pred HHHcCCeEEecCEEEEEEECCCC----eEEEEEEEeCCCcEEEEE-----cCEEEEeCCCCccCHHHHHHh
Confidence 33458999999999999987622 699999986567655663 599999999887 46666543
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=94.07 E-value=0.076 Score=53.98 Aligned_cols=60 Identities=15% Similarity=0.217 Sum_probs=45.1
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCc-hHHHH
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS-PQLLM 121 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~T-P~LLl 121 (404)
.+.+.+++|++++.|++|+.++++ +++||++.+.+|+..++. ++.||||+|.+.. +.++.
T Consensus 264 ~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----a~~VVlAtGg~~~n~~~~~ 324 (571)
T 1y0p_A 264 NAVKRNIDLRMNTRGIEVLKDDKG----TVKGILVKGMYKGYYWVK-----ADAVILATGGFAKNNERVA 324 (571)
T ss_dssp HHHHTTCEEESSEEEEEEEECTTS----CEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCHHHHH
T ss_pred HHHhcCCEEEeCCEeeEeEEcCCC----eEEEEEEEeCCCcEEEEE-----CCeEEEeCCCcccCHHHHH
Confidence 334468999999999999987632 699999986457655663 5779999999864 55443
No 15
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=93.92 E-value=0.078 Score=53.89 Aligned_cols=58 Identities=16% Similarity=0.255 Sum_probs=44.7
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCc-hHHH
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS-PQLL 120 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~T-P~LL 120 (404)
+.+.+++|++++.|++|+.++++ +++||++.+.+|+..++. +|.||||+|.+.. +++|
T Consensus 260 ~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 260 AKEQGIDTRLNSRVVKLVVNDDH----SVVGAVVHGKHTGYYMIG-----AKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp HHHTTCCEECSEEEEEEEECTTS----BEEEEEEEETTTEEEEEE-----EEEEEECCCCCTTCHHHH
T ss_pred HHhcCCEEEeCCEEEEEEECCCC----cEEEEEEEeCCCcEEEEE-----cCEEEEecCCcccCHHHH
Confidence 34458999999999999987622 799999986567655663 5999999999875 4444
No 16
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=93.66 E-value=0.12 Score=53.22 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=43.3
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCc
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
.+.+.+++|+.++.|++|+.+++ +++||.+.+ .+|+.+++. +|.||||+|.+..
T Consensus 164 ~~~~~gv~i~~~~~v~~Li~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 218 (621)
T 2h88_A 164 RSLRYDTSYFVEYFALDLLMENG-----ECRGVIALCIEDGTIHRFR-----AKNTVIATGGYGR 218 (621)
T ss_dssp HHTTSCCEEEETEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHhCCCEEEEceEEEEEEEECC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCcccc
Confidence 34567999999999999998753 799999876 467666663 6899999998764
No 17
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=93.05 E-value=0.1 Score=53.30 Aligned_cols=53 Identities=13% Similarity=0.088 Sum_probs=41.5
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
.+.|++|+.++.|++|+.++++ +++||.+.+ .+|+.+++. ++.||||+|.+..
T Consensus 154 ~~~gv~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 154 LKNHTTIFSEWYALDLVKNQDG----AVVGCTALCIETGEVVYFK-----ARATVLATGGAGR 207 (588)
T ss_dssp HHTTCEEEETEEEEEEEECTTS----CEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HhCCCEEEeCcEEEEEEECCCC----EEEEEEEEEcCCCeEEEEE-----cCEEEECCCCCcc
Confidence 3459999999999999986332 699999876 457665663 6899999998654
No 18
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=92.77 E-value=0.16 Score=51.58 Aligned_cols=59 Identities=19% Similarity=0.137 Sum_probs=46.5
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+.+.+|++++.|++|..+++ +++||++.+. +|+..++. ++.||+|+|+. +.+|+...|
T Consensus 199 ~~~Ga~i~~~t~V~~l~~~~~-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~w-s~~l~~~~g 258 (571)
T 2rgh_A 199 AEDGAYLVSKMKAVGFLYEGD-----QIVGVKARDLLTDEVIEIK-----AKLVINTSGPW-VDKVRNLNF 258 (571)
T ss_dssp HHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----BSCEEECCGGG-HHHHHTTCC
T ss_pred HHcCCeEEeccEEEEEEEeCC-----EEEEEEEEEcCCCCEEEEE-----cCEEEECCChh-HHHHHHhhc
Confidence 356899999999999998754 6999998863 35545563 69999999985 888887655
No 19
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=92.25 E-value=0.33 Score=49.64 Aligned_cols=53 Identities=15% Similarity=0.184 Sum_probs=41.5
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCch
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSP 117 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP 117 (404)
..+|++|+.++.|++|+.+++ +++||.+.+ .+|+.+++. ++.||||+|.+...
T Consensus 146 ~~gnv~i~~~~~v~~l~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVDDG-----HVRGLVAMNMMEGTLVQIR-----ANAVVMATGGAGRV 199 (602)
T ss_dssp TCTTEEEEETEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSCEEECCCCCGGG
T ss_pred hCCCcEEEeCCEEEEEEEeCC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCCCccc
Confidence 455699999999999998753 799998875 457655663 67899999987643
No 20
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=92.03 E-value=0.32 Score=50.36 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=41.5
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
.+.+++|+.++.|++|+.+++ +++||.+.+ .+|+.+++. +|.||||+|.+..
T Consensus 169 ~~~gv~i~~~~~v~~L~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 221 (660)
T 2bs2_A 169 LKLGVSIQDRKEAIALIHQDG-----KCYGAVVRDLVTGDIIAYV-----AKGTLIATGGYGR 221 (660)
T ss_dssp HHHTCEEECSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECCCCCGG
T ss_pred HhCCCEEEECcEEEEEEecCC-----EEEEEEEEECCCCcEEEEE-----cCEEEEccCcchh
Confidence 345899999999999998653 799999875 457666663 6899999998763
No 21
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=91.43 E-value=0.19 Score=49.87 Aligned_cols=53 Identities=15% Similarity=0.144 Sum_probs=35.8
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
.+.+.+|++++.|++|+.+++ +++||+.. +|+. + .++.||.+|+...|.+.|+
T Consensus 232 ~~~Gg~I~~~~~V~~I~~~~~-----~~~gV~~~--~g~~--~-----~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 232 QDLGGEVVLNARVSHMETTGN-----KIEAVHLE--DGRR--F-----LTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--E-----ECSCEEECCC---------
T ss_pred HHhCCceeeecceeEEEeeCC-----eEEEEEec--CCcE--E-----EcCEEEECCCHHHHHHHhc
Confidence 445789999999999999875 79999874 4654 3 3689999999988877666
No 22
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=91.26 E-value=0.36 Score=48.72 Aligned_cols=55 Identities=7% Similarity=0.111 Sum_probs=40.2
Q ss_pred CCCeEEecCcEEEEEEEecCC--CCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcC
Q 015588 56 PSGLTLLLHASVHKVLFRIKG--KARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALG 115 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~--~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~ 115 (404)
.+|++|++++.|++|+.++++ ....+++||.+.+ .+|+.+++. +|.||||+|.+.
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~~ 208 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCH-----AKAVVLATGGAS 208 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEE-----CSEEEECCCCCG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEE-----cCeEEECCCCcc
Confidence 379999999999999984321 0001699999876 356655663 689999999865
No 23
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=91.05 E-value=0.44 Score=48.27 Aligned_cols=59 Identities=22% Similarity=0.266 Sum_probs=47.5
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+.+.+|++++.|++|..+++ +++||++.+. +|+..++. ++.||+|+|+ .+.+|+...|
T Consensus 181 ~~~G~~i~~~~~V~~l~~~~g-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~-~s~~l~~~~g 240 (561)
T 3da1_A 181 VARGAVALNYMKVESFIYDQG-----KVVGVVAKDRLTDTTHTIY-----AKKVVNAAGP-WVDTLREKDR 240 (561)
T ss_dssp HHTTCEEEESEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCGG-GHHHHHHTTT
T ss_pred HHcCCEEEcCCEEEEEEEcCC-----eEEEEEEEEcCCCceEEEE-----CCEEEECCCc-chHHHHHhcC
Confidence 346899999999999998754 6999999863 46556663 6899999998 5888888776
No 24
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=89.85 E-value=0.3 Score=50.60 Aligned_cols=51 Identities=16% Similarity=0.113 Sum_probs=40.3
Q ss_pred CeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcC
Q 015588 58 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALG 115 (404)
Q Consensus 58 nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~ 115 (404)
|++|+.++.|++|+.+++. ..+++||.+.+ .+|+.+.+. +|.||||+|.++
T Consensus 182 gV~i~~~~~v~dLi~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----Ak~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNT--PNRIAGAVGFNLRANEVHIFK-----ANAMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEECSSS--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBC
T ss_pred CcEEEEceEEEEEEEeCCc--cceEEEEEEEEcCCCcEEEEE-----eCEEEECCCccc
Confidence 8999999999999997641 12799998876 356666663 689999999765
No 25
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=89.70 E-value=0.22 Score=46.75 Aligned_cols=58 Identities=21% Similarity=0.230 Sum_probs=42.2
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhh
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 123 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~S 123 (404)
.+.+.+.+|++++.|++|..++++ ...|+. .+|+..++ .++.||+|+|+. |++|+...
T Consensus 159 ~~~~~Gv~i~~~~~v~~i~~~~~~-----~~~v~~--~~g~~~~~-----~a~~VV~A~G~~-s~~l~~~~ 216 (369)
T 3dme_A 159 DAESDGAQLVFHTPLIAGRVRPEG-----GFELDF--GGAEPMTL-----SCRVLINAAGLH-APGLARRI 216 (369)
T ss_dssp HHHHTTCEEECSCCEEEEEECTTS-----SEEEEE--CTTSCEEE-----EEEEEEECCGGG-HHHHHHTE
T ss_pred HHHHCCCEEECCCEEEEEEEcCCc-----eEEEEE--CCCceeEE-----EeCEEEECCCcc-hHHHHHHh
Confidence 334568999999999999987542 344654 35654555 368999999985 88888766
No 26
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=88.85 E-value=0.57 Score=48.32 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=39.9
Q ss_pred Ce-EEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCc
Q 015588 58 GL-TLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 58 nl-~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
|+ +|+.++.|++|+.+++. ..+++||.+.+ .+|+.+++. +|.||||+|.+..
T Consensus 166 gv~~i~~~~~v~~L~~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNND--PNAVAGAVGFSVREPKFYVFK-----AKAVILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECTTC--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcCCc--cceeEEEEEEEecCCcEEEEE-----cCEEEECCCcccc
Confidence 89 99999999999987530 12799998765 456655663 6999999998654
No 27
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=87.79 E-value=0.42 Score=46.35 Aligned_cols=53 Identities=23% Similarity=0.281 Sum_probs=39.6
Q ss_pred cCCCCeEEecCc---EEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 54 ANPSGLTLLLHA---SVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 54 ~~r~nl~v~~~a---~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
+.+.+++|++++ .|++|+.+++ +++||+.. +|+ ++ .++.||+|+|+. |++|+-
T Consensus 171 a~~~Gv~i~~~t~~~~V~~i~~~~~-----~v~gV~t~--~G~--~i-----~Ad~VV~AtG~~-s~~l~~ 226 (438)
T 3dje_A 171 AQRMGVKFVTGTPQGRVVTLIFENN-----DVKGAVTA--DGK--IW-----RAERTFLCAGAS-AGQFLD 226 (438)
T ss_dssp HHHTTCEEEESTTTTCEEEEEEETT-----EEEEEEET--TTE--EE-----ECSEEEECCGGG-GGGTSC
T ss_pred HHhcCCEEEeCCcCceEEEEEecCC-----eEEEEEEC--CCC--EE-----ECCEEEECCCCC-hhhhcC
Confidence 344689999999 9999998754 68899863 453 34 368999999984 566554
No 28
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=85.95 E-value=0.69 Score=44.48 Aligned_cols=52 Identities=17% Similarity=0.200 Sum_probs=40.4
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
.+.+.+|++++.|++|..+++ +++||.. +|+ ++ .++.||+|+|+-.+++||.
T Consensus 207 ~~~G~~i~~~~~V~~i~~~~~-----~~~gv~~---~g~--~~-----~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 207 SANGGKIHTGQEVSKILIENG-----KAAGIIA---DDR--IH-----DADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHTTCEEECSCCEEEEEEETT-----EEEEEEE---TTE--EE-----ECSEEEECSCHHHHHHHTT
T ss_pred HHcCCEEEECCceeEEEEECC-----EEEEEEE---CCE--EE-----ECCEEEECCCHHHHHHhcC
Confidence 345789999999999998764 6889875 343 34 3689999999988887654
No 29
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=85.09 E-value=1.5 Score=43.65 Aligned_cols=50 Identities=26% Similarity=0.331 Sum_probs=40.8
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 114 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai 114 (404)
.+.+++|+.++.|++|..+++ +++||.+.+.+|+.+++ .++-||+|.|.-
T Consensus 122 ~~~Gv~i~~~~~V~~v~~~~~-----~v~gv~~~~~dG~~~~i-----~ad~VI~AdG~~ 171 (512)
T 3e1t_A 122 ERKGVDVRERHEVIDVLFEGE-----RAVGVRYRNTEGVELMA-----HARFIVDASGNR 171 (512)
T ss_dssp HHTTCEEESSCEEEEEEEETT-----EEEEEEEECSSSCEEEE-----EEEEEEECCCTT
T ss_pred HhCCCEEEcCCEEEEEEEECC-----EEEEEEEEeCCCCEEEE-----EcCEEEECCCcc
Confidence 346899999999999998754 69999998766765566 379999999974
No 30
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=84.45 E-value=1.4 Score=43.68 Aligned_cols=55 Identities=16% Similarity=0.051 Sum_probs=42.7
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
.+.+.+|++++.|++|..++ .+.+|++.+ .+|+..++. ++.||+|+|+. +.+|+.
T Consensus 160 ~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~-----A~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 160 VRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQ-----ARGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEE-----ESCEEECCGGG-HHHHHH
T ss_pred HHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEE-----CCEEEECCChh-HHHHHH
Confidence 34589999999999998865 378898875 346655663 68999999985 777775
No 31
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=83.81 E-value=2.3 Score=38.63 Aligned_cols=49 Identities=16% Similarity=0.155 Sum_probs=37.2
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-------C---CceeEEEeecCCCceEEEecCC
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-------T---GAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-------~---g~~~~v~~~~~a~keVILsAGa 113 (404)
...++++++++.|++|..+++ +++||++... + |+..++ .++.||+|+|.
T Consensus 131 ~~~gv~i~~~~~V~~i~~~~~-----~v~gv~~~~~~~~~~~~~g~~g~~~~i-----~ad~VV~AtG~ 189 (284)
T 1rp0_A 131 ARPNVKLFNAVAAEDLIVKGN-----RVGGVVTNWALVAQNHHTQSCMDPNVM-----EAKIVVSSCGH 189 (284)
T ss_dssp TSTTEEEEETEEEEEEEEETT-----EEEEEEEEEHHHHTCTTTSSCCCCEEE-----EEEEEEECCCS
T ss_pred hcCCCEEEcCcEEEEEEecCC-----eEEEEEEeccccccccCccccCceEEE-----ECCEEEECCCC
Confidence 457999999999999998753 6889988521 1 333455 47999999996
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=82.87 E-value=1.5 Score=41.45 Aligned_cols=55 Identities=20% Similarity=0.225 Sum_probs=41.0
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+.+.+++|+.++.|++|..+++ +++||+. .+| ++ .++.||+|+|+. |++|+...|
T Consensus 159 ~~~~Gv~i~~~~~v~~i~~~~~-----~v~gv~~--~~g---~i-----~a~~VV~A~G~~-s~~l~~~~g 213 (382)
T 1y56_B 159 AKEYGAKLLEYTEVKGFLIENN-----EIKGVKT--NKG---II-----KTGIVVNATNAW-ANLINAMAG 213 (382)
T ss_dssp HHHTTCEEECSCCEEEEEESSS-----BEEEEEE--TTE---EE-----ECSEEEECCGGG-HHHHHHHHT
T ss_pred HHHCCCEEECCceEEEEEEECC-----EEEEEEE--CCc---EE-----ECCEEEECcchh-HHHHHHHcC
Confidence 3456899999999999988754 5888875 234 34 368999999985 677776665
No 33
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=82.48 E-value=1.7 Score=42.30 Aligned_cols=52 Identities=17% Similarity=0.360 Sum_probs=39.6
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchH
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 118 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~ 118 (404)
.+.+.+++|++++.|++|..+++ ++.+|++. +|+ ++ .++.||+|+|....|.
T Consensus 143 ~~~~~GV~i~~~~~V~~i~~~~~-----~v~~V~~~--~G~--~i-----~Ad~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 143 RLKDLGVKIRTNTPVETIEYENG-----QTKAVILQ--TGE--VL-----ETNHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TCC--EE-----ECSCEEECCCCSSSGG
T ss_pred HHHHCCCEEEeCcEEEEEEecCC-----cEEEEEEC--CCC--EE-----ECCEEEECCCCCcCCC
Confidence 33446899999999999998653 57888763 454 34 3689999999988774
No 34
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=82.28 E-value=2.7 Score=40.89 Aligned_cols=51 Identities=14% Similarity=0.180 Sum_probs=39.9
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcC
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALG 115 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~ 115 (404)
.+.+++|+.++.|++|..+++ +++||++.+. +|+..++ .++-||.|.|+-.
T Consensus 111 ~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~~~~G~~~~~-----~ad~VV~AdG~~s 162 (453)
T 3atr_A 111 QDRGVEIWDLTTAMKPIFEDG-----YVKGAVLFNRRTNEELTV-----YSKVVVEATGYSR 162 (453)
T ss_dssp HHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTTEEEEE-----ECSEEEECCGGGC
T ss_pred HHcCCEEEeCcEEEEEEEECC-----EEEEEEEEEcCCCceEEE-----EcCEEEECcCCch
Confidence 346899999999999988754 6899998754 5665555 3789999999743
No 35
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=79.96 E-value=5.4 Score=36.12 Aligned_cols=60 Identities=17% Similarity=0.229 Sum_probs=46.5
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
..+.++++++++.|++|.-++ +..+|++.+ .+|+..++ ..+.||+|.|..-+..+|..+|
T Consensus 200 ~~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~~~g 260 (323)
T 3f8d_A 200 KKKPNVEFVLNSVVKEIKGDK------VVKQVVVENLKTGEIKEL-----NVNGVFIEIGFDPPTDFAKSNG 260 (323)
T ss_dssp HTCTTEEEECSEEEEEEEESS------SEEEEEEEETTTCCEEEE-----ECSEEEECCCEECCHHHHHHTT
T ss_pred HhCCCcEEEeCCEEEEEeccC------ceeEEEEEECCCCceEEE-----EcCEEEEEECCCCChhHHhhcC
Confidence 345699999999999997552 488899876 34665555 3689999999887778888776
No 36
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=79.46 E-value=2.4 Score=38.77 Aligned_cols=59 Identities=20% Similarity=0.366 Sum_probs=44.2
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+.++++++++.|++|.-+++ ++.+|.+.+ .+|+..++ ..+.||+|.|..-++.+|..+|
T Consensus 202 ~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~g 261 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGDGK-----KVTGVKYKDRTTGEEKLI-----ETDGVFIYVGLIPQTSFLKDSG 261 (319)
T ss_dssp HTTCCEECSEEEEEEEESSS-----SEEEEEEEETTTCCEEEE-----CCSEEEECCCEEECCGGGTTSC
T ss_pred cCCcEEEcCCeEEEEecCCc-----eEEEEEEEEcCCCceEEE-----ecCEEEEeeCCccChHHHhhcc
Confidence 45899999999999976532 588999875 24665555 5799999999877767776554
No 37
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=78.95 E-value=3.6 Score=37.18 Aligned_cols=58 Identities=19% Similarity=0.116 Sum_probs=44.4
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHh
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML 122 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~ 122 (404)
.+.++++++++.|.+|.-+++ ++++|++...+|+..++ ..+.||+|.|..-++.+|..
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~~-----~~~~v~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~~ 251 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDKM-----GVAGVKVKLKDGSIRDL-----NVPGIFTFVGLNVRNEILKQ 251 (315)
T ss_dssp HCTTEEEECSCEEEEEEEETT-----EEEEEEEECTTSCEEEE-----CCSCEEECSCEEECCGGGBC
T ss_pred hcCCeEEEeCcEEEEEEcCCC-----cEEEEEEEcCCCCeEEe-----ecCeEEEEEcCCCCchhhhc
Confidence 457999999999999976643 68899987445765565 57899999997666665544
No 38
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=78.77 E-value=1.9 Score=41.87 Aligned_cols=56 Identities=25% Similarity=0.379 Sum_probs=39.9
Q ss_pred cCCCCeEEecCcEEEEEEEe--------------cCCCCCCeEEEEEEEeCCCceeEE--EeecCCCceEEEecCCcCch
Q 015588 54 ANPSGLTLLLHASVHKVLFR--------------IKGKARPVAHGVVFRDATGAKHRA--YLKNGPKNEIIVSAGALGSP 117 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~--------------~~~~~~~~a~GV~~~~~~g~~~~v--~~~~~a~keVILsAGai~TP 117 (404)
+.+.+++|++++.|++|..+ .+ .++++|+. .+| ++ . ++.||+|+|+. |+
T Consensus 191 ~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~----~~v~~V~t--~~g---~i~~~-----Ad~VV~AtG~~-s~ 255 (448)
T 3axb_A 191 ASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE----ARASAAVL--SDG---TRVEV-----GEKLVVAAGVW-SN 255 (448)
T ss_dssp HHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC----EEEEEEEE--TTS---CEEEE-----EEEEEECCGGG-HH
T ss_pred HHhCCCEEEcCCeEEEEEecccccccccccccccCC----CceEEEEe--CCC---EEeec-----CCEEEECCCcC-HH
Confidence 34468999999999999873 11 25677764 245 23 3 58999999985 77
Q ss_pred HHHHhhc
Q 015588 118 QLLMLSG 124 (404)
Q Consensus 118 ~LLl~SG 124 (404)
+|+...|
T Consensus 256 ~l~~~~g 262 (448)
T 3axb_A 256 RLLNPLG 262 (448)
T ss_dssp HHHGGGT
T ss_pred HHHHHcC
Confidence 8877555
No 39
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=77.14 E-value=2.5 Score=40.02 Aligned_cols=55 Identities=18% Similarity=0.267 Sum_probs=40.7
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+.+.+++|+.++.|++|..+++ ++++|+.. +| ++ .++.||+|+|+ .++.|+...|
T Consensus 184 ~~~~g~~i~~~~~v~~i~~~~~-----~~~~v~~~--~g---~~-----~a~~vV~a~G~-~s~~l~~~~g 238 (405)
T 2gag_B 184 ANEMGVDIIQNCEVTGFIKDGE-----KVTGVKTT--RG---TI-----HAGKVALAGAG-HSSVLAEMAG 238 (405)
T ss_dssp HHHTTCEEECSCCEEEEEESSS-----BEEEEEET--TC---CE-----EEEEEEECCGG-GHHHHHHHHT
T ss_pred HHHCCCEEEcCCeEEEEEEeCC-----EEEEEEeC--Cc---eE-----ECCEEEECCch-hHHHHHHHcC
Confidence 3446899999999999988753 57788752 45 34 36899999998 4667777665
No 40
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=76.65 E-value=3.6 Score=37.31 Aligned_cols=56 Identities=23% Similarity=0.295 Sum_probs=41.6
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
..+++|++++.|++|.-+++ ++++|++.+ .+|+..++ ..+.||+|.|..-++.+|.
T Consensus 192 ~~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 192 LKNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHNI-----ELAGIFVQIGLLPNTNWLE 248 (310)
T ss_dssp CTTEEEESSEEEEEEEESSS-----SEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGGT
T ss_pred CCCeEEecCCceEEEEcCCC-----cEEEEEEEECCCCcEEEE-----EcCEEEEeeCCccCchHHh
Confidence 36999999999999975432 588999986 24655555 4689999999765555553
No 41
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=76.37 E-value=5.8 Score=36.92 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=43.7
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+.++++++++.|++|.-+++ ++.+|++...+|+..++ ..+.||+|.|..-.+.+|..+|
T Consensus 214 ~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESNG-----VLTRVHLRSSDGSKWTV-----EADRLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp HTSEEEESSEEEEEEEEETT-----EEEEEEEEETTCCEEEE-----ECSEEEECCCBCCSCGGGGGSS
T ss_pred cCceEEEcCcCHHHhccCCC-----ceEEEEEEecCCCeEEE-----eCCEEEECCCCCCCHHHHHhhc
Confidence 45799999999999987643 58889886445655555 3689999999765556666554
No 42
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=75.67 E-value=4.1 Score=38.32 Aligned_cols=50 Identities=12% Similarity=0.134 Sum_probs=38.3
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcC
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 115 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~ 115 (404)
.+.+.+|+.++.|++|..+++ +++||.+.+ .+...++ .++.||.|.|+-.
T Consensus 113 ~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~-~~~~~~~-----~a~~vV~A~G~~s 162 (397)
T 3cgv_A 113 AKAGADVWVKSPALGVIKENG-----KVAGAKIRH-NNEIVDV-----RAKMVIAADGFES 162 (397)
T ss_dssp HHHTCEEESSCCEEEEEEETT-----EEEEEEEEE-TTEEEEE-----EEEEEEECCCTTC
T ss_pred HhCCCEEEECCEEEEEEEeCC-----EEEEEEEEE-CCeEEEE-----EcCEEEECCCcch
Confidence 346899999999999998754 699999875 3444555 3689999999743
No 43
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=75.19 E-value=1.6 Score=40.94 Aligned_cols=54 Identities=15% Similarity=0.067 Sum_probs=38.7
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+.+.+.+|++++.|++|..+++ + ++|+. .+| ++ .++.||+|+|+ .|++|+...|
T Consensus 164 a~~~Gv~i~~~~~V~~i~~~~~-----~-~~V~t--~~g---~i-----~a~~VV~A~G~-~s~~l~~~~g 217 (381)
T 3nyc_A 164 IRRNQGQVLCNHEALEIRRVDG-----A-WEVRC--DAG---SY-----RAAVLVNAAGA-WCDAIAGLAG 217 (381)
T ss_dssp HHHTTCEEESSCCCCEEEEETT-----E-EEEEC--SSE---EE-----EESEEEECCGG-GHHHHHHHHT
T ss_pred HHHCCCEEEcCCEEEEEEEeCC-----e-EEEEe--CCC---EE-----EcCEEEECCCh-hHHHHHHHhC
Confidence 3345899999999999998753 3 44543 234 34 36899999998 5778877665
No 44
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=71.78 E-value=5.4 Score=36.45 Aligned_cols=56 Identities=7% Similarity=0.157 Sum_probs=42.6
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
..++++++++.|++|.-+++ ++++|++.+. +|+..++ ..+.||+|.|..-++.+|.
T Consensus 221 ~~gv~i~~~~~v~~i~~~~~-----~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~~ 277 (338)
T 3itj_A 221 NEKIEILYNTVALEAKGDGK-----LLNALRIKNTKKNEETDL-----PVSGLFYAIGHTPATKIVA 277 (338)
T ss_dssp CTTEEEECSEEEEEEEESSS-----SEEEEEEEETTTTEEEEE-----ECSEEEECSCEEECCGGGB
T ss_pred cCCeEEeecceeEEEEcccC-----cEEEEEEEECCCCceEEE-----EeCEEEEEeCCCCChhHhh
Confidence 45999999999999987653 5899999863 3544555 3689999999876666554
No 45
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=70.07 E-value=5.3 Score=37.74 Aligned_cols=53 Identities=19% Similarity=0.244 Sum_probs=35.7
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+.+++|++++.|++|..+++ . |.+...+| ++. ++.||+|+|+ .+++|+...|
T Consensus 164 ~~~Gv~i~~~~~V~~i~~~~~-----~---v~v~t~~g---~i~-----a~~VV~A~G~-~s~~l~~~~g 216 (397)
T 2oln_A 164 QAAGATLRAGETVTELVPDAD-----G---VSVTTDRG---TYR-----AGKVVLACGP-YTNDLLEPLG 216 (397)
T ss_dssp HHTTCEEEESCCEEEEEEETT-----E---EEEEESSC---EEE-----EEEEEECCGG-GHHHHHGGGT
T ss_pred HHcCCEEECCCEEEEEEEcCC-----e---EEEEECCC---EEE-----cCEEEEcCCc-ChHHHhhhcC
Confidence 345899999999999987653 2 33333233 343 6889999998 4666665433
No 46
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=69.85 E-value=6.6 Score=35.61 Aligned_cols=58 Identities=14% Similarity=0.152 Sum_probs=42.3
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-C-CceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-T-GAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~-g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
+.+.++++++++.|++|.-+++ ++++|++.+. + |+..++ ..+.||+|.|..-.+.+|.
T Consensus 194 l~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~~g~~~~i-----~~D~vv~a~G~~p~~~~~~ 253 (320)
T 1trb_A 194 VENGNIILHTNRTLEEVTGDQM-----GVTGVRLRDTQNSDNIESL-----DVAGLFVAIGHSPNTAIFE 253 (320)
T ss_dssp HHTSSEEEECSCEEEEEEECSS-----SEEEEEEECCTTCCCCEEE-----ECSEEEECSCEEESCGGGT
T ss_pred cccCCeEEEcCceeEEEEcCCC-----ceEEEEEEeccCCCceEEE-----EcCEEEEEeCCCCChHHhc
Confidence 3457999999999999976543 5889998752 2 544555 3689999999766655554
No 47
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=69.09 E-value=6.6 Score=37.55 Aligned_cols=57 Identities=21% Similarity=0.267 Sum_probs=44.7
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
..+.+++|++++.|++|.-+++ ++++|++. +|+ ++ .++.||+|+|..-+..+|..+|
T Consensus 204 l~~~GV~i~~~~~v~~i~~~~~-----~v~~v~l~--dG~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 260 (415)
T 3lxd_A 204 HRAHGVDLRTGAAMDCIEGDGT-----KVTGVRMQ--DGS--VI-----PADIVIVGIGIVPCVGALISAG 260 (415)
T ss_dssp HHHTTCEEEETCCEEEEEESSS-----BEEEEEES--SSC--EE-----ECSEEEECSCCEESCHHHHHTT
T ss_pred HHhCCCEEEECCEEEEEEecCC-----cEEEEEeC--CCC--EE-----EcCEEEECCCCccChHHHHhCC
Confidence 3456899999999999976543 68899874 454 33 3689999999988878888887
No 48
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=68.54 E-value=13 Score=34.77 Aligned_cols=57 Identities=19% Similarity=0.196 Sum_probs=39.6
Q ss_pred CCCCeEEecCcEEEEEEEecCC--------------CCCCeEEEEEEEe----CCC------ceeEEEeecCCCceEEEe
Q 015588 55 NPSGLTLLLHASVHKVLFRIKG--------------KARPVAHGVVFRD----ATG------AKHRAYLKNGPKNEIIVS 110 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~--------------~~~~~a~GV~~~~----~~g------~~~~v~~~~~a~keVILs 110 (404)
..+|++|+.++.|+.|+.++++ .+..++.||.+.. ..| ...++ .+|-||+|
T Consensus 172 ~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i-----~Ak~VV~A 246 (344)
T 3jsk_A 172 QRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI-----NAPVIIST 246 (344)
T ss_dssp TCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE-----ECSEEEEC
T ss_pred hCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE-----EcCEEEEC
Confidence 4579999999999999997620 0123899998752 123 23455 37899999
Q ss_pred cCCcCc
Q 015588 111 AGALGS 116 (404)
Q Consensus 111 AGai~T 116 (404)
.|.-..
T Consensus 247 TG~~s~ 252 (344)
T 3jsk_A 247 TGHDGP 252 (344)
T ss_dssp CCSSSS
T ss_pred CCCCch
Confidence 996443
No 49
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=67.71 E-value=6.8 Score=37.35 Aligned_cols=58 Identities=16% Similarity=0.299 Sum_probs=45.3
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
...+.++++++++.|++|.-+++ ++++|++. +|+ ++ .++.||+|.|..-+..+|..+|
T Consensus 193 ~l~~~GV~i~~~~~v~~i~~~~~-----~v~~V~~~--dG~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 250 (404)
T 3fg2_P 193 RHSGAGIRMHYGVRATEIAAEGD-----RVTGVVLS--DGN--TL-----PCDLVVVGVGVIPNVEIAAAAG 250 (404)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSC--EE-----ECSEEEECCCEEECCHHHHHTT
T ss_pred HHHhCCcEEEECCEEEEEEecCC-----cEEEEEeC--CCC--EE-----EcCEEEECcCCccCHHHHHhCC
Confidence 33456899999999999987643 68888874 464 33 3699999999987778888887
No 50
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=67.17 E-value=4.1 Score=41.97 Aligned_cols=53 Identities=13% Similarity=0.193 Sum_probs=36.7
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhh
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 123 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~S 123 (404)
.+.+++|++++.|++|..+++ + ++|+. .+|.. + .++.||+|+|+. +++|+...
T Consensus 428 ~~~Gv~i~~~t~V~~l~~~~~-----~-v~V~t--~~G~~--i-----~Ad~VVlAtG~~-s~~l~~~~ 480 (676)
T 3ps9_A 428 QQQGLQIYYQYQLQNFSRKDD-----C-WLLNF--AGDQQ--A-----THSVVVLANGHQ-ISRFSQTS 480 (676)
T ss_dssp HHTTCEEEESCCEEEEEEETT-----E-EEEEE--TTSCE--E-----EESEEEECCGGG-GGCSTTTT
T ss_pred HhCCCEEEeCCeeeEEEEeCC-----e-EEEEE--CCCCE--E-----ECCEEEECCCcc-hhcccccc
Confidence 345899999999999998764 2 34443 34543 4 368899999985 66555433
No 51
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=66.72 E-value=8 Score=39.11 Aligned_cols=53 Identities=21% Similarity=0.349 Sum_probs=39.6
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe----CCCce-------eEEEeecCCCceEEEecCCcCc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD----ATGAK-------HRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~----~~g~~-------~~v~~~~~a~keVILsAGai~T 116 (404)
.+.+++|+.++.|++|+.++++ +++||.+.+ .+|+. .++ .++-||+|.|+-..
T Consensus 155 ~~~Gv~i~~g~~v~~l~~~~~g----~V~gV~~~~~g~~~~G~~~~~~~~g~~i-----~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 155 EALGVEVYPGYAAAEILFHEDG----SVKGIATNDVGIQKDGAPKTTFERGLEL-----HAKVTIFAEGCHGH 218 (584)
T ss_dssp HHTTCEEETTCCEEEEEECTTS----SEEEEEECCEEECTTSCEEEEEECCCEE-----ECSEEEECCCTTCH
T ss_pred HHcCCEEEcCCEEEEEEEcCCC----CEEEEEeCCccccCCCCcccccCCceEE-----ECCEEEEeeCCCch
Confidence 3358999999999999987643 688998753 24542 345 37999999998665
No 52
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=66.70 E-value=9.2 Score=34.85 Aligned_cols=55 Identities=13% Similarity=0.257 Sum_probs=40.7
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCchHHH
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 120 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP~LL 120 (404)
+..++++++++.|++|.-++ ++++|++.+ .+|+..++ ..+.||+|.|..-+..+|
T Consensus 199 ~~~gv~i~~~~~v~~i~~~~------~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 199 ANPKMKFIWDTAVEEIQGAD------SVSGVKLRNLKTGEVSEL-----ATDGVFIFIGHVPNTAFV 254 (325)
T ss_dssp TCTTEEEECSEEEEEEEESS------SEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGG
T ss_pred hcCCceEecCCceEEEccCC------cEEEEEEEECCCCcEEEE-----EcCEEEEccCCCCChHHH
Confidence 44699999999999997542 478999875 25665555 368999999976555554
No 53
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=66.70 E-value=6.4 Score=41.65 Aligned_cols=55 Identities=18% Similarity=0.219 Sum_probs=41.5
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+.+.+++|+.++.|++|..+++ ++++|+.. +| ++ .++.||+|+|+. |++|+...|
T Consensus 161 a~~~Gv~i~~~t~V~~i~~~~~-----~v~~V~t~--~G---~i-----~Ad~VV~AaG~~-s~~l~~~~g 215 (830)
T 1pj5_A 161 TESAGVTYRGSTTVTGIEQSGG-----RVTGVQTA--DG---VI-----PADIVVSCAGFW-GAKIGAMIG 215 (830)
T ss_dssp HHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TE---EE-----ECSEEEECCGGG-HHHHHHTTT
T ss_pred HHHcCCEEECCceEEEEEEeCC-----EEEEEEEC--Cc---EE-----ECCEEEECCccc-hHHHHHHhC
Confidence 3445899999999999988654 57788652 34 34 368999999985 688877666
No 54
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=66.68 E-value=9.4 Score=34.46 Aligned_cols=59 Identities=14% Similarity=0.083 Sum_probs=43.2
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCchHHHHhh
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 123 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~S 123 (404)
...++++++++.|++|.-+++ ++.+|++.+ .+|+..++ ..+.||+|.|..-+..+|..+
T Consensus 190 ~~~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 190 NNDKIEFLTPYVVEEIKGDAS-----GVSSLSIKNTATNEKREL-----VVPGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp TCTTEEEETTEEEEEEEEETT-----EEEEEEEEETTTCCEEEE-----ECSEEEECSCEEECCGGGBCT
T ss_pred hCCCeEEEeCCEEEEEECCCC-----cEeEEEEEecCCCceEEE-----ecCEEEEEecCccChhhhhcc
Confidence 346999999999999976533 577898874 24665555 368999999976665666544
No 55
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=66.13 E-value=7.8 Score=38.50 Aligned_cols=55 Identities=24% Similarity=0.324 Sum_probs=41.4
Q ss_pred CCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 57 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 57 ~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
+|++|++++.|++|.-+++ ++++|.+.+ .+|+..++ ..+.||+|.|..-+..+|.
T Consensus 404 ~gV~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~pn~~~l~ 459 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHSV-----ALAGIFVQIGLLPNTHWLE 459 (521)
T ss_dssp TTEEEECSEEEEEEEECSS-----SEEEEEEEETTTCCEEEE-----ECSEEEECCCEEESCGGGT
T ss_pred CCcEEEeCCEEEEEEcCCC-----cEEEEEEEeCCCCceEEE-----EcCEEEECcCCCCCchHHh
Confidence 6999999999999875432 588999986 34665666 3689999999765545543
No 56
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=64.90 E-value=12 Score=35.41 Aligned_cols=48 Identities=19% Similarity=0.189 Sum_probs=35.5
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCc
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 114 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai 114 (404)
+.+++|+.++.|+.|..++++ .. |.+...+|+.+++. ++-||+|.|.-
T Consensus 118 ~~gv~i~~~~~v~~i~~~~~~----~~--v~v~~~~g~~~~~~-----a~~vV~A~G~~ 165 (421)
T 3nix_A 118 RQGVDVEYEVGVTDIKFFGTD----SV--TTIEDINGNKREIE-----ARFIIDASGYG 165 (421)
T ss_dssp HHTCEEECSEEEEEEEEETTE----EE--EEEEETTSCEEEEE-----EEEEEECCGGG
T ss_pred hCCCEEEcCCEEEEEEEeCCE----EE--EEEEcCCCCEEEEE-----cCEEEECCCCc
Confidence 348999999999999987642 22 55555567765663 68999999964
No 57
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=64.03 E-value=11 Score=37.37 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=43.3
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchH-HHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ-LLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~-LLl~SG 124 (404)
+.+.+++|++++.|++|.-++++ +++|+.+...+|+ .++ .++.||+|+|..-+.. +|..+|
T Consensus 265 l~~~GV~i~~~~~V~~i~~~~~~----~v~~~~v~~~~G~-~~i-----~aD~Vv~A~G~~p~~~~~l~~~g 326 (523)
T 1mo9_A 265 MKEQGMEIISGSNVTRIEEDANG----RVQAVVAMTPNGE-MRI-----ETDFVFLGLGEQPRSAELAKILG 326 (523)
T ss_dssp HHHTTCEEESSCEEEEEEECTTS----BEEEEEEEETTEE-EEE-----ECSCEEECCCCEECCHHHHHHHT
T ss_pred HHhCCcEEEECCEEEEEEEcCCC----ceEEEEEEECCCc-EEE-----EcCEEEECcCCccCCccCHHHcC
Confidence 34568999999999999764432 5666655544553 244 4789999999877666 677776
No 58
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=64.02 E-value=4.7 Score=39.60 Aligned_cols=47 Identities=11% Similarity=0.215 Sum_probs=35.8
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcC
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 115 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~ 115 (404)
.+.|++|+.++.| +|+.+++ +++||.+.+.+| ++ .++.||||+|+..
T Consensus 130 ~~~gv~i~~~~~v-~l~~~~~-----~v~Gv~v~~~~g---~~-----~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EIRVKDG-----KVTGFVTEKRGL---VE-----DVDKLVLATGGYS 176 (472)
T ss_dssp HHTTCCEECCCEE-EEEEETT-----EEEEEEETTTEE---EC-----CCSEEEECCCCCG
T ss_pred HhCCCEEEECcEE-EEEEeCC-----EEEEEEEEeCCC---eE-----EeeeEEECCCCCc
Confidence 4579999999999 9988753 699998754222 23 3799999999754
No 59
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=63.02 E-value=12 Score=34.04 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=43.5
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
..+.++++++++.|++|.-++++ .++++|++.+. +|+..++ ..+.||+|.|..-+..+|.
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~---~~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~~ 265 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGER---DVLGGLKVKNVVTGDVSDL-----KVSGLFFAIGHEPATKFLD 265 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSS---SSEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGGT
T ss_pred HhCCCeeEecCCceEEEeCCCCc---cceeeEEEEecCCCceEEE-----ecCEEEEEeCCccchHHhh
Confidence 35679999999999999765421 25888998753 4655555 4799999999876666553
No 60
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=62.90 E-value=4.7 Score=41.71 Aligned_cols=54 Identities=11% Similarity=0.159 Sum_probs=36.7
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhh
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 123 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~S 123 (404)
.+.+++|++++.|++|..+++ . ++|+. .+|. .++ .++.||+|+|+. +++|+...
T Consensus 423 ~~~Gv~i~~~t~V~~l~~~~~-----~-v~V~t--~~G~-~~i-----~Ad~VVlAtG~~-s~~l~~~~ 476 (689)
T 3pvc_A 423 QQNGMTCHYQHELQRLKRIDS-----Q-WQLTF--GQSQ-AAK-----HHATVILATGHR-LPEWEQTH 476 (689)
T ss_dssp HHTTCEEEESCCEEEEEECSS-----S-EEEEE--C-CC-CCE-----EESEEEECCGGG-TTCSTTTT
T ss_pred HhCCCEEEeCCeEeEEEEeCC-----e-EEEEe--CCCc-EEE-----ECCEEEECCCcc-hhcccccc
Confidence 346899999999999998764 2 24543 2443 124 368999999986 66665543
No 61
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=62.45 E-value=8 Score=38.10 Aligned_cols=50 Identities=18% Similarity=0.241 Sum_probs=35.2
Q ss_pred hhcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCc
Q 015588 52 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 114 (404)
Q Consensus 52 ~~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai 114 (404)
..+...+.+|++++.|++|+++.++ +++||+.. +|+. + .++.||+++|-+
T Consensus 264 r~~~~~Gg~i~l~t~V~~I~~d~~g----~v~gV~~~--~G~~--i-----~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 264 RMCAINGGTFMLNKNVVDFVFDDDN----KVCGIKSS--DGEI--A-----YCDKVICDPSYV 313 (475)
T ss_dssp HHHHHC--CEESSCCEEEEEECTTS----CEEEEEET--TSCE--E-----EEEEEEECGGGC
T ss_pred HHHHHcCCEEEeCCeEEEEEEecCC----eEEEEEEC--CCcE--E-----ECCEEEECCCcc
Confidence 3334458999999999999994332 69999873 4653 3 368899999976
No 62
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=61.37 E-value=10 Score=38.09 Aligned_cols=47 Identities=13% Similarity=0.235 Sum_probs=36.5
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCc
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
+.+++|++++.|++|..+++ ++++|++. +|+ ++ .++.||+|.|+-..
T Consensus 232 ~~Gv~I~~~t~V~~I~~~~~-----~v~gV~l~--~G~--~i-----~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 232 ELGGEIRFSTRVDDLHMEDG-----QITGVTLS--NGE--EI-----KSRHVVLAVGHSAR 278 (549)
T ss_dssp HTTCEEESSCCEEEEEESSS-----BEEEEEET--TSC--EE-----ECSCEEECCCTTCH
T ss_pred hcCCEEEeCCEEEEEEEeCC-----EEEEEEEC--CCC--EE-----ECCEEEECCCCChh
Confidence 45899999999999988754 58888874 454 34 36899999998543
No 63
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=60.95 E-value=6.2 Score=37.71 Aligned_cols=51 Identities=12% Similarity=0.044 Sum_probs=36.9
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
+.+.+.+|++++.|++|..+++ ++ | . .+|+ ++ .++.||+|+|+-.+++||-
T Consensus 199 ~~~~G~~i~~~~~V~~i~~~~~-----~v--V--~-~~g~--~~-----~ad~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 199 IMENKGKILTRKEVVEINIEEK-----KV--Y--T-RDNE--EY-----SFDVAISNVGVRETVKLIG 249 (421)
T ss_dssp HHTTTCEEESSCCEEEEETTTT-----EE--E--E-TTCC--EE-----ECSEEEECSCHHHHHHHHC
T ss_pred HHHCCCEEEcCCeEEEEEEECC-----EE--E--E-eCCc--EE-----EeCEEEECCCHHHHHHhcC
Confidence 3445899999999999987653 34 4 3 3554 33 3689999999988887663
No 64
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=60.18 E-value=8.9 Score=39.21 Aligned_cols=46 Identities=15% Similarity=0.271 Sum_probs=34.7
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCc
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
.+|++|+ ++.|+.|..+++ +++||... +|. ++ .++.||||+|++..
T Consensus 136 ~~GVeI~-~~~Vt~L~~e~g-----~V~GV~t~--dG~--~i-----~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 136 QENLYIK-QEEVVDIIVKNN-----QVVGVRTN--LGV--EY-----KTKAVVVTTGTFLN 181 (637)
T ss_dssp CTTEEEE-ESCEEEEEESSS-----BEEEEEET--TSC--EE-----ECSEEEECCTTCBT
T ss_pred CCCCEEE-EeEEEEEEecCC-----EEEEEEEC--CCc--EE-----EeCEEEEccCCCcc
Confidence 3799995 789999988754 58999874 463 34 36899999998643
No 65
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=58.93 E-value=13 Score=35.86 Aligned_cols=49 Identities=20% Similarity=0.352 Sum_probs=35.1
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchH
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 118 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~ 118 (404)
+.+.+++|+++++|++|..+++ ...|+ ..+| ++ .++.||+|+|+...|+
T Consensus 142 l~~~Gv~i~~~~~V~~i~~~~~------~~~V~--~~~g---~i-----~ad~VIlAtG~~S~p~ 190 (417)
T 3v76_A 142 MKEAGVQLRLETSIGEVERTAS------GFRVT--TSAG---TV-----DAASLVVASGGKSIPK 190 (417)
T ss_dssp HHHHTCEEECSCCEEEEEEETT------EEEEE--ETTE---EE-----EESEEEECCCCSSCGG
T ss_pred HHHCCCEEEECCEEEEEEEeCC------EEEEE--ECCc---EE-----EeeEEEECCCCccCCC
Confidence 3345899999999999987653 23343 3344 34 3689999999987775
No 66
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=58.87 E-value=9.6 Score=34.58 Aligned_cols=59 Identities=15% Similarity=0.122 Sum_probs=43.5
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+.++++++++.|.+|.-++ ...+|.+.+. +|+..++ ..+.||+|.|..-++.+|..+|
T Consensus 200 ~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~~~~ 259 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEIL-----EIDDLIVNYGFVSSLGPIKNWG 259 (332)
T ss_dssp HHSSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEE-----ECSEEEECCCEECCCGGGGGSS
T ss_pred hcCCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEE-----ECCEEEEeeccCCCchHHhhcC
Confidence 34689999999999986543 2667888763 4555555 4689999999877777777665
No 67
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=58.84 E-value=6.9 Score=39.69 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=38.2
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
+.+.+++|+.++.|+.|..+++ ..++|.+.+ +|+..++ .++-||.|.|+
T Consensus 138 a~~~Gv~i~~g~~V~~v~~~~g-----~~~~V~~~~-~G~~~~i-----~AdlVV~AdG~ 186 (591)
T 3i3l_A 138 ARSRGITVHEETPVTDVDLSDP-----DRVVLTVRR-GGESVTV-----ESDFVIDAGGS 186 (591)
T ss_dssp HHHTTCEEETTCCEEEEECCST-----TCEEEEEEE-TTEEEEE-----EESEEEECCGG
T ss_pred HHhCCCEEEeCCEEEEEEEcCC-----CEEEEEEec-CCceEEE-----EcCEEEECCCC
Confidence 3447899999999999988743 478888875 5655556 37899999997
No 68
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=58.45 E-value=16 Score=33.89 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=25.2
Q ss_pred cCCCCeEEecCcEEEEEEEecCCC-CCCeEEEEEEE
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGK-ARPVAHGVVFR 88 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~-~~~~a~GV~~~ 88 (404)
...+|++|+.++.|+.|+.+.+.. +..+++||.+.
T Consensus 157 ~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~ 192 (326)
T 2gjc_A 157 LQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTN 192 (326)
T ss_dssp HTSTTEEEETTEEEEEEEECCCC-----CEEEEEEE
T ss_pred HHhcCcEEEecceeeeeeecccccCCCcEEEEEEec
Confidence 345799999999999999974210 11279999875
No 69
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=57.56 E-value=18 Score=31.35 Aligned_cols=47 Identities=19% Similarity=0.270 Sum_probs=34.0
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCch
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 117 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP 117 (404)
.++++++ ++.|++|..+++ ++++|... +|+ ++ .++.||+|+|..-.+
T Consensus 81 ~~gv~i~-~~~v~~i~~~~~-----~v~~v~~~--~g~--~i-----~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 81 LRPLHLF-QATATGLLLEGN-----RVVGVRTW--EGP--PA-----RGEKVVLAVGSFLGA 127 (232)
T ss_dssp CTTEEEE-ECCEEEEEEETT-----EEEEEEET--TSC--CE-----ECSEEEECCTTCSSC
T ss_pred CCCcEEE-EeEEEEEEEeCC-----EEEEEEEC--CCC--EE-----ECCEEEECCCCChhh
Confidence 3699999 579999988753 57788763 454 34 368999999984333
No 70
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=55.83 E-value=7.8 Score=36.07 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=32.5
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHH
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 119 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~L 119 (404)
.+.+++|+.++.|++|..+++ . ..|+ ..+|+ + .++.||+|+|+. |++|
T Consensus 160 ~~~G~~i~~~~~V~~i~~~~~-----~-~~v~--~~~g~---~-----~a~~vV~a~G~~-s~~l 207 (372)
T 2uzz_A 160 KEAGCAQLFNCPVTAIRHDDD-----G-VTIE--TADGE---Y-----QAKKAIVCAGTW-VKDL 207 (372)
T ss_dssp HHTTCEEECSCCEEEEEECSS-----S-EEEE--ESSCE---E-----EEEEEEECCGGG-GGGT
T ss_pred HHCCCEEEcCCEEEEEEEcCC-----E-EEEE--ECCCe---E-----EcCEEEEcCCcc-HHhh
Confidence 345899999999999987653 2 2343 33442 4 368999999973 4443
No 71
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=55.57 E-value=10 Score=35.36 Aligned_cols=51 Identities=27% Similarity=0.343 Sum_probs=34.5
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
+.+.+++|+.++.|++|..+++ . ..|+ ..+| ++ .++.||+|+|+ .+++|+-
T Consensus 160 ~~~~Gv~i~~~~~v~~i~~~~~-----~-~~v~--~~~g---~~-----~a~~vV~A~G~-~~~~l~~ 210 (389)
T 2gf3_A 160 AEARGAKVLTHTRVEDFDISPD-----S-VKIE--TANG---SY-----TADKLIVSMGA-WNSKLLS 210 (389)
T ss_dssp HHHTTCEEECSCCEEEEEECSS-----C-EEEE--ETTE---EE-----EEEEEEECCGG-GHHHHGG
T ss_pred HHHCCCEEEcCcEEEEEEecCC-----e-EEEE--eCCC---EE-----EeCEEEEecCc-cHHHHhh
Confidence 3445899999999999987653 2 2233 3233 34 36899999998 4566654
No 72
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=54.26 E-value=8.7 Score=35.89 Aligned_cols=53 Identities=19% Similarity=0.186 Sum_probs=37.2
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+.+++|+.++.|++|..+++ ++ +|+. .+| ++ .++.||+|+|+. ++.|+...|
T Consensus 175 ~~~g~~i~~~~~v~~i~~~~~-----~~-~v~~--~~g---~~-----~a~~vV~A~G~~-s~~l~~~~~ 227 (382)
T 1ryi_A 175 KMLGAEIFEHTPVLHVERDGE-----AL-FIKT--PSG---DV-----WANHVVVASGVW-SGMFFKQLG 227 (382)
T ss_dssp HHTTCEEETTCCCCEEECSSS-----SE-EEEE--TTE---EE-----EEEEEEECCGGG-THHHHHHTT
T ss_pred HHCCCEEEcCCcEEEEEEECC-----EE-EEEc--CCc---eE-----EcCEEEECCChh-HHHHHHhcC
Confidence 345899999999999987653 34 5543 234 34 368999999985 666765443
No 73
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=52.84 E-value=19 Score=32.67 Aligned_cols=60 Identities=15% Similarity=0.077 Sum_probs=42.9
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
..+.++++++++.|++|.-+ + ++.+|++... +|+..++ ..+.||+|.|.--...+|..+|
T Consensus 201 l~~~gv~v~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~~ 261 (335)
T 2zbw_A 201 HEEGRLEVLTPYELRRVEGD-E-----RVRWAVVFHNQTQEELAL-----EVDAVLILAGYITKLGPLANWG 261 (335)
T ss_dssp HHTTSSEEETTEEEEEEEES-S-----SEEEEEEEETTTCCEEEE-----ECSEEEECCCEEEECGGGGGSC
T ss_pred cccCCeEEecCCcceeEccC-C-----CeeEEEEEECCCCceEEE-----ecCEEEEeecCCCCchHhhhcc
Confidence 34568999999999998753 2 4788888743 4654555 4689999999765555665544
No 74
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=52.69 E-value=18 Score=34.84 Aligned_cols=49 Identities=14% Similarity=0.201 Sum_probs=37.0
Q ss_pred CCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCc
Q 015588 57 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 57 ~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
.+++|++++.|++|.-+++ ...|.+.+. +|+..++ ..+.||+|.|..-.
T Consensus 329 ~~v~i~~~~~v~~v~~~~~------~~~v~~~~~~~g~~~~~-----~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQ------GIELALRDAGSGELSVE-----TYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETT------EEEEEEEETTTCCEEEE-----EESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCC------EEEEEEEEcCCCCeEEE-----ECCEEEEeeCCCCC
Confidence 6899999999999987643 345666653 4666555 46899999997666
No 75
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=51.55 E-value=12 Score=36.42 Aligned_cols=46 Identities=20% Similarity=0.225 Sum_probs=34.2
Q ss_pred CCCCeEEecCcEEEEEEEec-CCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCc
Q 015588 55 NPSGLTLLLHASVHKVLFRI-KGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 114 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~-~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai 114 (404)
.+.+.+|++++.|++|..+. ++ +++||.. +|+ ++ .++.||+|+|..
T Consensus 253 ~~~G~~i~~~~~V~~i~~~~~~~----~~~~V~~---~g~--~~-----~ad~VV~a~~~~ 299 (453)
T 2bcg_G 253 AIYGGTYMLDTPIDEVLYKKDTG----KFEGVKT---KLG--TF-----KAPLVIADPTYF 299 (453)
T ss_dssp HHTTCEEECSCCCCEEEEETTTT----EEEEEEE---TTE--EE-----ECSCEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEECCCC----eEEEEEE---CCe--EE-----ECCEEEECCCcc
Confidence 34578999999999999872 22 6888875 353 34 368899999986
No 76
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=47.24 E-value=18 Score=37.07 Aligned_cols=45 Identities=13% Similarity=0.322 Sum_probs=33.9
Q ss_pred CCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCc
Q 015588 57 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 57 ~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
+|++| .++.|+.|..+++ +++||... +|. ++ .++.||+|+|+.-.
T Consensus 138 ~GV~I-~~~~V~~L~~e~g-----~V~GV~t~--dG~--~I-----~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 138 PNLMI-FQQAVEDLIVEND-----RVVGAVTQ--MGL--KF-----RAKAVVLTVGTFLD 182 (651)
T ss_dssp TTEEE-EECCEEEEEESSS-----BEEEEEET--TSE--EE-----EEEEEEECCSTTTC
T ss_pred CCCEE-EEEEEEEEEecCC-----EEEEEEEC--CCC--EE-----ECCEEEEcCCCCcc
Confidence 79999 4679999988654 58899763 453 34 36899999998643
No 77
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=46.43 E-value=19 Score=34.77 Aligned_cols=52 Identities=15% Similarity=0.145 Sum_probs=33.6
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEE--EeCCCceeEEEeecCCCceEEEecCC
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVF--RDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~--~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
+.+-+.+|..++.|++|..+... .+..+|.+ .+..|+.+++ ..+.||||.|+
T Consensus 137 ~~~~~~~i~~~~~V~~i~~~~~~---~~~~~~~V~~~~g~g~~~~~-----~~d~lVlAtG~ 190 (463)
T 3s5w_A 137 ASHFQEQSRYGEEVLRIEPMLSA---GQVEALRVISRNADGEELVR-----TTRALVVSPGG 190 (463)
T ss_dssp HTTCTTTEEESEEEEEEEEEEET---TEEEEEEEEEEETTSCEEEE-----EESEEEECCCC
T ss_pred HHHcCCeEEeCCEEEEEEEecCC---CceEEEEEEEecCCCceEEE-----EeCEEEECCCC
Confidence 34446789999999999886321 13444444 3433444455 36899999997
No 78
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=45.98 E-value=38 Score=31.16 Aligned_cols=51 Identities=14% Similarity=0.147 Sum_probs=38.4
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCch
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 117 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP 117 (404)
.+.+.+++.++.|+.+..+++ ++++|.... +++..++. ++-||-|-|+ +|.
T Consensus 113 ~~~G~~~~~~~~v~~~~~~~~-----~~~~v~~~~-~~~~~~~~-----a~~vIgAdG~-~S~ 163 (397)
T 3oz2_A 113 AKAGADVWVKSPALGVIKENG-----KVAGAKIRH-NNEIVDVR-----AKMVIAADGF-ESE 163 (397)
T ss_dssp HHHTCEEESSCCEEEEEEETT-----EEEEEEEEE-TTEEEEEE-----EEEEEECCCT-TCH
T ss_pred HhcCcEEeeeeeeeeeeeccc-----eeeeeeecc-cccceEEE-----EeEEEeCCcc-ccH
Confidence 346899999999999998865 688888765 56666663 6788888775 443
No 79
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=45.06 E-value=17 Score=33.26 Aligned_cols=56 Identities=25% Similarity=0.306 Sum_probs=39.7
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCchHHHH
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 121 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~TP~LLl 121 (404)
.+.++++++++.|++|.-++ +..+|++.+. +|+..++ ..+.||+|.|..-++.+|.
T Consensus 202 ~~~gV~v~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~~ 258 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGDT------TVTGLRVRDTNTGAETTL-----PVTGVFVAIGHEPRSGLVR 258 (335)
T ss_dssp HCTTEEEECSEEEEEEECSS------SCCEEEEEEETTSCCEEE-----CCSCEEECSCEEECCTTTB
T ss_pred ccCCcEEEeCceeEEEecCC------cEeEEEEEEcCCCceEEe-----ecCEEEEccCCccChhHhh
Confidence 45699999999999986442 3667887642 4554555 5789999999765555543
No 80
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=45.01 E-value=12 Score=36.89 Aligned_cols=42 Identities=17% Similarity=0.225 Sum_probs=30.0
Q ss_pred eecCCCeeeeccCceEe-eccccCCCCCCChHHHHHHHHHHHHHHH
Q 015588 349 VVDHDYKVLGVDALRVI-DGSTFYYSPGTNPQATVMMLGRYMGVRI 393 (404)
Q Consensus 349 VVD~~lrV~Gv~nLrVv-DaSv~P~~~~~np~~t~~aiaer~A~~i 393 (404)
+||++||+-+.+|+|++ |++..|..+.+. .++.-|+-+|+.|
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni 396 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNF 396 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHH
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHH
Confidence 79999999999999988 788888665442 2334455455544
No 81
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=44.50 E-value=12 Score=37.02 Aligned_cols=56 Identities=9% Similarity=-0.002 Sum_probs=38.5
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCchH
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQ 118 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~TP~ 118 (404)
.+.+++|+.++.|+.|..+.++ ....+|.+.+. +|+..++ .++.||+|.|+...++
T Consensus 177 ~~~gv~v~~~~~v~~i~~~~~~---~~~~~v~~~~~~~g~~~~i-----~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 177 LLLGVEIHWGVKFTGLQPPPRK---GSGWRAQLQPNPPAQLASY-----EFDVLISAAGGKFVPE 233 (497)
T ss_dssp HHTTCEEEESCEEEEEECCCST---TCCBEEEEESCCCHHHHTC-----CBSEEEECCCTTCCCT
T ss_pred HhCCCEEEeCCEEEEEEEecCC---CCEEEEEEEECCCCCEEEE-----EcCEEEECCCCCcccc
Confidence 3468999999999999875311 13456776543 4533334 4799999999876664
No 82
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=42.32 E-value=8 Score=36.84 Aligned_cols=54 Identities=31% Similarity=0.326 Sum_probs=33.4
Q ss_pred cCCCCeEEecCcEEE---------EEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHH-hh
Q 015588 54 ANPSGLTLLLHASVH---------KVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM-LS 123 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~---------rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl-~S 123 (404)
+.+.+++|+.++.|+ +|..+++ ++ +|+. .+| ++ .++.||+|+|+ .|+.|+. ..
T Consensus 182 ~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~-----~v-~v~~--~~g---~i-----~a~~VV~A~G~-~s~~l~~~~~ 244 (405)
T 3c4n_A 182 AIGQGAGLLLNTRAELVPGGVRLHRLTVTNT-----HQ-IVVH--ETR---QI-----RAGVIIVAAGA-AGPALVEQGL 244 (405)
T ss_dssp HHTTTCEEECSCEEEEETTEEEEECBCC-------------CB--CCE---EE-----EEEEEEECCGG-GHHHHHHHHH
T ss_pred HHHCCCEEEcCCEEEeccccccccceEeeCC-----eE-EEEE--CCc---EE-----ECCEEEECCCc-cHHHHHHHhc
Confidence 345689999999999 7765543 34 5543 223 34 36899999998 4777776 55
Q ss_pred c
Q 015588 124 G 124 (404)
Q Consensus 124 G 124 (404)
|
T Consensus 245 g 245 (405)
T 3c4n_A 245 G 245 (405)
T ss_dssp C
T ss_pred C
Confidence 4
No 83
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=41.68 E-value=32 Score=35.18 Aligned_cols=50 Identities=14% Similarity=0.125 Sum_probs=34.6
Q ss_pred hhcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 52 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 52 ~~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
..+...+-+|++++.|++|+++++. .+|+||.. .+|+. + .++.||..+..
T Consensus 386 r~~~~~Gg~i~l~~~V~~I~~~~~~---g~v~gV~~--~~Ge~--i-----~A~~VVs~~~~ 435 (650)
T 1vg0_A 386 RMCAVFGGIYCLRHSVQCLVVDKES---RKCKAVID--QFGQR--I-----ISKHFIIEDSY 435 (650)
T ss_dssp HHHHHTTCEEESSCCEEEEEEETTT---CCEEEEEE--TTSCE--E-----ECSEEEEEGGG
T ss_pred HHHHHcCCEEEeCCEeeEEEEeCCC---CeEEEEEe--CCCCE--E-----EcCEEEEChhh
Confidence 3334457899999999999998731 27999883 35753 3 25777775553
No 84
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=41.61 E-value=19 Score=34.30 Aligned_cols=56 Identities=18% Similarity=0.120 Sum_probs=42.6
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
..+.++++++++.|++|.-++ ++.+|++. +|+ ++ .++.||+|.|..-...+|..+|
T Consensus 195 l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~--dg~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 250 (410)
T 3ef6_A 195 LTELGVQVELGTGVVGFSGEG------QLEQVMAS--DGR--SF-----VADSALICVGAEPADQLARQAG 250 (410)
T ss_dssp HHHHTCEEECSCCEEEEECSS------SCCEEEET--TSC--EE-----ECSEEEECSCEEECCHHHHHTT
T ss_pred HHHCCCEEEeCCEEEEEeccC------cEEEEEEC--CCC--EE-----EcCEEEEeeCCeecHHHHHhCC
Confidence 345689999999999986532 36677774 464 33 3689999999988878888887
No 85
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=41.14 E-value=19 Score=35.04 Aligned_cols=59 Identities=17% Similarity=0.315 Sum_probs=39.8
Q ss_pred CCeE--EecCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 57 SGLT--LLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 57 ~nl~--v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
-++. |..++.|++|..++++ .-..|++.+. +|+..++ ..+.||+|.|....|+++..-|
T Consensus 114 ~gv~~~i~~~~~V~~v~~~~~~----~~~~V~~~~~~~g~~~~~-----~~d~VVvAtG~~s~p~~p~ipG 175 (464)
T 2xve_A 114 AGVRKYIRFNTAVRHVEFNEDS----QTFTVTVQDHTTDTIYSE-----EFDYVVCCTGHFSTPYVPEFEG 175 (464)
T ss_dssp HTCGGGEECSEEEEEEEEETTT----TEEEEEEEETTTTEEEEE-----EESEEEECCCSSSSBCCCCCBT
T ss_pred cCCcceEEeCCEEEEEEEcCCC----CcEEEEEEEcCCCceEEE-----EcCEEEECCCCCCCCccCCCCC
Confidence 3666 8899999999887542 1334665542 3543444 3689999999888887665444
No 86
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=40.72 E-value=35 Score=34.83 Aligned_cols=46 Identities=20% Similarity=0.241 Sum_probs=33.9
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCc
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
.+|++|+ +..|+.|..+++ +++||... +|+ ++ .++.||+|+|+.-.
T Consensus 130 ~~GV~I~-~~~V~~L~~d~g-----~V~GV~t~--~G~--~i-----~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 130 EPNIDLL-QDTVIGVSANSG-----KFSSVTVR--SGR--AI-----QAKAAILACGTFLN 175 (641)
T ss_dssp CTTEEEE-ECCEEEEEEETT-----EEEEEEET--TSC--EE-----EEEEEEECCTTCBT
T ss_pred CCCCEEE-eeEEEEEEecCC-----EEEEEEEC--CCc--EE-----EeCEEEECcCCCCC
Confidence 3799996 458999988754 68898763 464 34 36899999998633
No 87
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=40.42 E-value=19 Score=32.75 Aligned_cols=49 Identities=20% Similarity=0.323 Sum_probs=32.9
Q ss_pred CeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHH
Q 015588 58 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 120 (404)
Q Consensus 58 nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LL 120 (404)
+++|++++.|++|..++++ |.+...+|+.. . .++.||+|.|+-...++|
T Consensus 119 g~~i~~~~~v~~i~~~~~~--------~~v~~~~g~~~-~-----~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEH--------WNLLDAEGQNH-G-----PFSHVIIATPAPQASTLL 167 (336)
T ss_dssp TCCEECSCCEEEEEECSSC--------EEEEETTSCEE-E-----EESEEEECSCHHHHGGGG
T ss_pred cCcEEecCEEEEEEEeCCE--------EEEEeCCCcCc-c-----ccCEEEEcCCHHHHHHhh
Confidence 7899999999999876542 33333456432 2 258999999975444443
No 88
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=40.00 E-value=36 Score=32.34 Aligned_cols=54 Identities=19% Similarity=0.203 Sum_probs=35.2
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchH
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 118 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~ 118 (404)
.+.+.+++|++++.|++|..++++ ...+ ..|+ ..+| ++ .++.||+|+|+...|+
T Consensus 118 ~~~~~Gv~i~~~~~v~~i~~~~~g-~~~~-~~v~--~~~g---~i-----~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 118 ECDKYGAKILLRSEVSQVERIQND-EKVR-FVLQ--VNST---QW-----QCKNLIVATGGLSMPG 171 (401)
T ss_dssp HHHHHTCEEECSCCEEEEEECCSC-SSCC-EEEE--ETTE---EE-----EESEEEECCCCSSCGG
T ss_pred HHHHCCCEEEeCCEEEEEEcccCc-CCCe-EEEE--ECCC---EE-----ECCEEEECCCCccCCC
Confidence 334468999999999999876210 0012 2343 3233 34 3689999999988775
No 89
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=38.99 E-value=14 Score=33.72 Aligned_cols=56 Identities=16% Similarity=0.107 Sum_probs=37.8
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+.+.+++++.++.|++|..+++ ..++|+ ..+| ++ ..+.||+|.|+...|.++...|
T Consensus 86 ~~~~~~~~~~~~~v~~i~~~~~-----~~~~v~--~~~g---~~-----~~d~vV~AtG~~~~~~~~~~~g 141 (357)
T 4a9w_A 86 EQKYALPVLRPIRVQRVSHFGE-----RLRVVA--RDGR---QW-----LARAVISATGTWGEAYTPEYQG 141 (357)
T ss_dssp HHHTTCCEECSCCEEEEEEETT-----EEEEEE--TTSC---EE-----EEEEEEECCCSGGGBCCCCCTT
T ss_pred HHHcCCEEEcCCEEEEEEECCC-----cEEEEE--eCCC---EE-----EeCEEEECCCCCCCCCCCCCCC
Confidence 3456889999999999987653 333344 2234 34 3689999999876666554444
No 90
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=38.82 E-value=40 Score=31.40 Aligned_cols=50 Identities=20% Similarity=0.137 Sum_probs=35.0
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCc
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
+.+++|+.++.|++|..++++ ...|++.+ +|+..++ .++-||.|.|.-..
T Consensus 115 ~~g~~i~~~~~v~~i~~~~~~-----~~~v~~~~-~g~~~~~-----~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQGE-----RPYVTFER-DGERLRL-----DCDYIAGCDGFHGI 164 (394)
T ss_dssp HTTCEEESSCEEEEEECTTSS-----SCEEEEEE-TTEEEEE-----ECSEEEECCCTTCS
T ss_pred hcCCeEEeceeEEEEEEecCC-----ceEEEEec-CCcEEEE-----EeCEEEECCCCCcH
Confidence 358999999999999765322 23466643 5764455 37899999997444
No 91
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=38.51 E-value=13 Score=36.28 Aligned_cols=43 Identities=9% Similarity=0.038 Sum_probs=21.6
Q ss_pred CeeeeccCceEeeccccCCCCCCChHHHHHHHHHHHHHHHHhhhhcc
Q 015588 354 YKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLAS 400 (404)
Q Consensus 354 lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiaer~A~~ii~~~~~~ 400 (404)
.+.-.++|||.|.+|++|-. + . ..+++=|..+|+.|+++-.+.
T Consensus 452 ~~~t~i~gLyl~G~~t~pG~--G-v-~ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 452 NRDKTITNLYLVGAGTHPGA--G-I-PGVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp ----CCTTEEECCCH---------H-HHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCCEEEECCCCCCcc--c-H-HHHHHHHHHHHHHHHHHhcCC
Confidence 34557899999999998832 1 1 122233777777777765543
No 92
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=38.27 E-value=48 Score=32.08 Aligned_cols=43 Identities=14% Similarity=0.160 Sum_probs=29.6
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
+.|++|++++.|++|..+++ .+ .|+. .+|+. + .++.||+|+|.
T Consensus 268 ~g~~~i~~~~~V~~i~~~~~-----~v-~v~~--~~g~~--~-----~ad~vI~a~~~ 310 (495)
T 2vvm_A 268 TGRLGYVFGCPVRSVVNERD-----AA-RVTA--RDGRE--F-----VAKRVVCTIPL 310 (495)
T ss_dssp TTCEEEESSCCEEEEEECSS-----SE-EEEE--TTCCE--E-----EEEEEEECCCG
T ss_pred cCceEEEeCCEEEEEEEcCC-----EE-EEEE--CCCCE--E-----EcCEEEECCCH
Confidence 33499999999999987643 12 2433 35643 3 36899999995
No 93
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=36.88 E-value=22 Score=34.24 Aligned_cols=44 Identities=20% Similarity=0.242 Sum_probs=33.5
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCc
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 114 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai 114 (404)
+.+.+|++++.|++|..+++ +++||.. +|+ ++ .++.||+++|..
T Consensus 246 ~~G~~i~~~~~V~~I~~~~~-----~v~~v~~---~g~--~~-----~ad~VV~a~~~~ 289 (433)
T 1d5t_A 246 IYGGTYMLNKPVDDIIMENG-----KVVGVKS---EGE--VA-----RCKQLICDPSYV 289 (433)
T ss_dssp HHTCCCBCSCCCCEEEEETT-----EEEEEEE---TTE--EE-----ECSEEEECGGGC
T ss_pred HcCCEEECCCEEEEEEEeCC-----EEEEEEE---CCe--EE-----ECCEEEECCCCC
Confidence 34678999999999998754 6888863 454 34 368999999976
No 94
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=36.57 E-value=63 Score=31.62 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=34.6
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcC
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 115 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~ 115 (404)
+.+.+|..+++|+.|..++++ ++ |++.+.+| .+++ .++-||.|.|+-.
T Consensus 119 ~~gv~v~~~~~v~~i~~~~~~-----v~-v~~~~~~g-~~~~-----~a~~vVgADG~~S 166 (499)
T 2qa2_A 119 GRGAELLRGHTVRALTDEGDH-----VV-VEVEGPDG-PRSL-----TTRYVVGCDGGRS 166 (499)
T ss_dssp HTTCEEEESCEEEEEEECSSC-----EE-EEEECSSC-EEEE-----EEEEEEECCCTTC
T ss_pred hCCCEEEcCCEEEEEEEeCCE-----EE-EEEEcCCC-cEEE-----EeCEEEEccCccc
Confidence 347999999999999887542 44 66665444 3455 3789999999843
No 95
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=35.57 E-value=60 Score=30.25 Aligned_cols=57 Identities=12% Similarity=0.138 Sum_probs=40.3
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+.+.++++++++.|++|.-+++ ...|++ .+|+ ++ .++.||+|.|..-...+|..+|
T Consensus 196 ~l~~~gv~i~~~~~v~~i~~~~~------~~~v~~--~~g~--~i-----~~d~vv~a~G~~p~~~l~~~~g 252 (384)
T 2v3a_A 196 GLEGLGVRFHLGPVLASLKKAGE------GLEAHL--SDGE--VI-----PCDLVVSAVGLRPRTELAFAAG 252 (384)
T ss_dssp HHHTTTCEEEESCCEEEEEEETT------EEEEEE--TTSC--EE-----EESEEEECSCEEECCHHHHHTT
T ss_pred HHHHcCCEEEeCCEEEEEEecCC------EEEEEE--CCCC--EE-----ECCEEEECcCCCcCHHHHHHCC
Confidence 34456899999999999976532 234554 3564 33 3689999999876666777776
No 96
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=35.46 E-value=36 Score=33.85 Aligned_cols=43 Identities=19% Similarity=0.144 Sum_probs=32.4
Q ss_pred CCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 57 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 57 ~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
++++|+.+ .|++|..++++ ++++|+.. +|+ ++ .++.||+|.|+
T Consensus 208 ~Gv~i~~~-~V~~i~~~~~g----~~~~v~~~--~G~--~i-----~ad~vI~A~G~ 250 (550)
T 2e4g_A 208 LGVRHVED-RVEHVQRDANG----NIESVRTA--TGR--VF-----DADLFVDCSGF 250 (550)
T ss_dssp SCCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EE-----ECSEEEECCGG
T ss_pred CCcEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EE-----ECCEEEECCCC
Confidence 48999999 99999886543 57788763 453 34 36899999996
No 97
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=35.15 E-value=50 Score=31.85 Aligned_cols=57 Identities=14% Similarity=0.059 Sum_probs=40.8
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+.+.++++++++.|++|.-+++ +++ |.+. +|+ ++ ..+.||+|.|..-.+.||..+|
T Consensus 211 ~l~~~GV~i~~~~~v~~i~~~~~-----~v~-v~~~--~g~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 267 (472)
T 3iwa_A 211 DLEKNDVVVHTGEKVVRLEGENG-----KVA-RVIT--DKR--TL-----DADLVILAAGVSPNTQLARDAG 267 (472)
T ss_dssp HHHHTTCEEECSCCEEEEEESSS-----BEE-EEEE--SSC--EE-----ECSEEEECSCEEECCHHHHHHT
T ss_pred HHHhcCCEEEeCCEEEEEEccCC-----eEE-EEEe--CCC--EE-----EcCEEEECCCCCcCHHHHHhCC
Confidence 33456899999999999976432 344 5554 454 34 3689999999876666777676
No 98
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=34.99 E-value=39 Score=31.63 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=33.0
Q ss_pred CCeEEecCcEEEEEEEecCCCCCCeEE-EEEEEeCCCceeEEEeecCCCceEEEecCCcCc
Q 015588 57 SGLTLLLHASVHKVLFRIKGKARPVAH-GVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 57 ~nl~v~~~a~V~rv~~~~~~~~~~~a~-GV~~~~~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
++++|+.++.|++|..+++ .++ .|++ .+|+ ++ .++.||+|.|+-..
T Consensus 121 ~gv~i~~~~~v~~i~~~~~-----~v~g~v~~--~~g~--~~-----~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 121 ATVEMLFETRIEAVQRDER-----HAIDQVRL--NDGR--VL-----RPRVVVGADGIASY 167 (399)
T ss_dssp TTEEEECSCCEEEEEECTT-----SCEEEEEE--TTSC--EE-----EEEEEEECCCTTCH
T ss_pred CCcEEEcCCEEEEEEEcCC-----ceEEEEEE--CCCC--EE-----ECCEEEECCCCChH
Confidence 4899999999999988654 244 4554 3465 34 36899999997443
No 99
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=34.55 E-value=22 Score=32.54 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=28.5
Q ss_pred CeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 58 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 58 nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
+.+|.+++.|++|..+++ .++ |.+ .+|+.. .++.||+|..+
T Consensus 123 g~~i~~~~~V~~i~~~~~-----~~~-v~~--~~g~~~-------~ad~vV~A~p~ 163 (342)
T 3qj4_A 123 GAEVYFRHRVTQINLRDD-----KWE-VSK--QTGSPE-------QFDLIVLTMPV 163 (342)
T ss_dssp TCEEESSCCEEEEEECSS-----SEE-EEE--SSSCCE-------EESEEEECSCH
T ss_pred CCEEEeCCEEEEEEEcCC-----EEE-EEE--CCCCEE-------EcCEEEECCCH
Confidence 689999999999988654 222 433 346432 25899999865
No 100
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=34.12 E-value=25 Score=33.83 Aligned_cols=56 Identities=13% Similarity=0.165 Sum_probs=36.6
Q ss_pred CeEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCc-eeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 58 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGA-KHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 58 nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~-~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+..|..++.|++|..+++ -.-|++.+ .+|+ ..++ ..+.||+|.|+...|.+.-..|
T Consensus 129 ~~~i~~~t~V~~v~~~~~------~~~V~~~~~~~G~~~~~~-----~~d~VVvAtG~~s~p~~p~i~G 186 (447)
T 2gv8_A 129 LPFIKLATDVLDIEKKDG------SWVVTYKGTKAGSPISKD-----IFDAVSICNGHYEVPYIPNIKG 186 (447)
T ss_dssp GGGEECSEEEEEEEEETT------EEEEEEEESSTTCCEEEE-----EESEEEECCCSSSSBCBCCCBT
T ss_pred hCeEEeCCEEEEEEeCCC------eEEEEEeecCCCCeeEEE-----EeCEEEECCCCCCCCCCCCCCC
Confidence 456888999999976542 23455554 1254 3344 3689999999988887654333
No 101
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=33.62 E-value=58 Score=31.86 Aligned_cols=49 Identities=18% Similarity=0.095 Sum_probs=35.2
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCc
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 116 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~T 116 (404)
+.+++|..+++|+.|..+++ .++ |++.+.+| .+++ .++-||.|.|+-..
T Consensus 118 ~~gv~v~~~~~v~~i~~~~~-----~v~-v~~~~~~g-~~~~-----~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 118 GLGADIRRGHEVLSLTDDGA-----GVT-VEVRGPEG-KHTL-----RAAYLVGCDGGRSS 166 (500)
T ss_dssp HTTCEEEETCEEEEEEEETT-----EEE-EEEEETTE-EEEE-----EESEEEECCCTTCH
T ss_pred HCCCEEECCcEEEEEEEcCC-----eEE-EEEEcCCC-CEEE-----EeCEEEECCCcchH
Confidence 34799999999999988764 344 66665444 3445 36899999998543
No 102
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=33.10 E-value=43 Score=31.99 Aligned_cols=58 Identities=17% Similarity=0.261 Sum_probs=42.0
Q ss_pred cCCCCeEEecCcEEEEEEEe-cCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFR-IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~-~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+.+.++++++++.|++|.-+ .++ ++++|++. +|+ ++ ..+.||+|.|..-...+|..+|
T Consensus 201 l~~~GV~i~~~~~v~~i~~~~~~~----~v~~v~~~--~G~--~i-----~~D~Vv~a~G~~p~~~l~~~~g 259 (431)
T 1q1r_A 201 HREAGVDIRTGTQVCGFEMSTDQQ----KVTAVLCE--DGT--RL-----PADLVIAGIGLIPNCELASAAG 259 (431)
T ss_dssp HHHHTCEEECSCCEEEEEECTTTC----CEEEEEET--TSC--EE-----ECSEEEECCCEEECCHHHHHTT
T ss_pred HHhCCeEEEeCCEEEEEEeccCCC----cEEEEEeC--CCC--EE-----EcCEEEECCCCCcCcchhhccC
Confidence 34468999999999999752 222 57788764 454 34 3689999999876667887777
No 103
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=32.89 E-value=44 Score=32.22 Aligned_cols=59 Identities=10% Similarity=0.020 Sum_probs=38.9
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHH--HHhhc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 124 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~L--Ll~SG 124 (404)
.+.+++|++++.|++|.-+++ . ..|++.+.+|+..++ ..+.||+|.|..-+..+ |..+|
T Consensus 227 ~~~gv~i~~~~~v~~i~~~~~-----~-~~v~~~~~~g~~~~i-----~~D~vv~a~G~~p~~~~l~l~~~g 287 (468)
T 2qae_A 227 KNEKMKFMTSTKVVGGTNNGD-----S-VSLEVEGKNGKRETV-----TCEALLVSVGRRPFTGGLGLDKIN 287 (468)
T ss_dssp HHTCCEEECSCEEEEEEECSS-----S-EEEEEECC---EEEE-----EESEEEECSCEEECCTTSCHHHHT
T ss_pred hcCCcEEEeCCEEEEEEEcCC-----e-EEEEEEcCCCceEEE-----ECCEEEECCCcccCCCCCCchhcC
Confidence 456899999999999976532 1 345554224543445 36899999998766666 55555
No 104
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=32.86 E-value=21 Score=35.69 Aligned_cols=51 Identities=20% Similarity=0.232 Sum_probs=35.3
Q ss_pred ceecHHH-hhhhcCCCCeEEec--CcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 43 QRHTAAD-LLEYANPSGLTLLL--HASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 43 ~R~s~~~-~l~~~~r~nl~v~~--~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
+|-.... |++...++|++|.+ +..|++|. ..||... +| .+ ..+.||+|+|.
T Consensus 336 kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it----------~~gv~~~--dG-~~-------~~D~IV~ATGf 389 (545)
T 3uox_A 336 KRVPMETNYYETYNRDNVHLVDIREAPIQEVT----------PEGIKTA--DA-AY-------DLDVIIYATGF 389 (545)
T ss_dssp SCCCEESSHHHHTTSTTEEEEETTTSCEEEEE----------TTEEEES--SC-EE-------ECSEEEECCCC
T ss_pred CccCCCccHHHHhcCCCEEEEecCCCCceEEc----------cCeEEeC--CC-ee-------ecCEEEECCcc
Confidence 4544333 88878899999996 77888873 2356553 56 33 35899999995
No 105
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=32.64 E-value=37 Score=33.45 Aligned_cols=49 Identities=10% Similarity=0.104 Sum_probs=33.8
Q ss_pred CCeEEecCcEEEEEEEecCCCCCCeEEEE--EEEeCCCceeEEEeecCCCceEEEecCCcC
Q 015588 57 SGLTLLLHASVHKVLFRIKGKARPVAHGV--VFRDATGAKHRAYLKNGPKNEIIVSAGALG 115 (404)
Q Consensus 57 ~nl~v~~~a~V~rv~~~~~~~~~~~a~GV--~~~~~~g~~~~v~~~~~a~keVILsAGai~ 115 (404)
.+.+|+.+++|+.|..++++ ++.+| .+.+.++ ..++ .++-||.|.|+-.
T Consensus 133 ~gv~i~~~~~v~~i~~~~~~----~~~~v~v~~~~~~~-~~~i-----~a~~vV~AdG~~S 183 (535)
T 3ihg_A 133 HGGAIRFGTRLLSFRQHDDD----AGAGVTARLAGPDG-EYDL-----RAGYLVGADGNRS 183 (535)
T ss_dssp TTCEEESSCEEEEEEEECGG----GCSEEEEEEEETTE-EEEE-----EEEEEEECCCTTC
T ss_pred CCCEEEeCCEEEEEEECCCC----ccccEEEEEEcCCC-eEEE-----EeCEEEECCCCcc
Confidence 48999999999999987642 23344 4444333 3445 3789999999853
No 106
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=32.19 E-value=19 Score=35.96 Aligned_cols=52 Identities=21% Similarity=0.338 Sum_probs=35.4
Q ss_pred ceecHHH-hhhhcCCCCeEEec--CcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 43 QRHTAAD-LLEYANPSGLTLLL--HASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 43 ~R~s~~~-~l~~~~r~nl~v~~--~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
+|-.... |++...++|++|.+ ...+++|. ..||.. .+|+.+. .+.||+|.|.
T Consensus 328 kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it----------~~gv~~--~dG~~~~-------~DvIV~ATGf 382 (540)
T 3gwf_A 328 KRPLCDSGYYEVYNRPNVEAVAIKENPIREVT----------AKGVVT--EDGVLHE-------LDVLVFATGF 382 (540)
T ss_dssp SSCEEESSTGGGGGSTTEEEEETTTSCEEEEC----------SSEEEE--TTCCEEE-------CSEEEECCCB
T ss_pred cccCCCccHHHHhcCCCEEEEeCCCCCccEEe----------cCeEEc--CCCCEEE-------CCEEEECCcc
Confidence 4444333 78877889999996 67888872 235665 3575443 5899999995
No 107
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=31.81 E-value=17 Score=36.24 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=38.8
Q ss_pred CCCCe--EEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 55 NPSGL--TLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 55 ~r~nl--~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+-++ +|..++.|+++.++++. ....|+. .+|+. + .++.||+|.|+...|++.-.-|
T Consensus 98 ~~~g~~~~i~~~~~V~~i~~~~~~----~~~~V~~--~~G~~--i-----~ad~lV~AtG~~s~p~~p~ipG 156 (540)
T 3gwf_A 98 DRFDLRRHFKFGTEVTSALYLDDE----NLWEVTT--DHGEV--Y-----RAKYVVNAVGLLSAINFPNLPG 156 (540)
T ss_dssp HHTTCGGGEEESCCEEEEEEETTT----TEEEEEE--TTSCE--E-----EEEEEEECCCSCCSBCCCCCTT
T ss_pred HHcCCcceeEeccEEEEEEEeCCC----CEEEEEE--cCCCE--E-----EeCEEEECCcccccCCCCCCCC
Confidence 34466 78999999999998652 2333443 35653 3 3689999999988777654444
No 108
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=31.63 E-value=49 Score=26.80 Aligned_cols=52 Identities=21% Similarity=0.130 Sum_probs=35.0
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+.+.+++++++ .|++|..+++ . ..|+ ..+| ++ .++.||+|.|.. |.++...|
T Consensus 66 ~~~~gv~v~~~-~v~~i~~~~~-----~-~~v~--~~~g---~i-----~ad~vI~A~G~~--~~~~~~~g 117 (180)
T 2ywl_A 66 ARRYGAEVRPG-VVKGVRDMGG-----V-FEVE--TEEG---VE-----KAERLLLCTHKD--PTLPSLLG 117 (180)
T ss_dssp HHHTTCEEEEC-CCCEEEECSS-----S-EEEE--CSSC---EE-----EEEEEEECCTTC--CHHHHHHT
T ss_pred HHHcCCEEEeC-EEEEEEEcCC-----E-EEEE--ECCC---EE-----EECEEEECCCCC--CCccccCC
Confidence 34568999999 9999876543 1 2233 2345 34 368999999975 56766666
No 109
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=31.52 E-value=53 Score=31.32 Aligned_cols=49 Identities=8% Similarity=0.100 Sum_probs=32.6
Q ss_pred ceecCCCeeeeccCceEe-eccccCCC-----CCCChHH--HHHHHHHHHHHHHHhh
Q 015588 348 KVVDHDYKVLGVDALRVI-DGSTFYYS-----PGTNPQA--TVMMLGRYMGVRILSE 396 (404)
Q Consensus 348 ~VVD~~lrV~Gv~nLrVv-DaSv~P~~-----~~~np~~--t~~aiaer~A~~ii~~ 396 (404)
-+||+.||+-+.+|+|.+ |++.+|.. +.+.|.+ .+..-|.-+|+.|++.
T Consensus 275 i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~ 331 (430)
T 3hyw_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVND 331 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHH
Confidence 389999999999999988 77778753 2233322 3334455566666544
No 110
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=31.45 E-value=71 Score=30.96 Aligned_cols=59 Identities=19% Similarity=0.244 Sum_probs=41.0
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCC-CceeEEEeecCCCceEEEecCCcCchHH--HHhhc
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 124 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~-g~~~~v~~~~~a~keVILsAGai~TP~L--Ll~SG 124 (404)
.+.+++|++++.|++|.-+++ ...|.+.+.+ |+..++ ..+.||+|.|..-+..+ |..+|
T Consensus 250 ~~~gV~v~~~~~v~~i~~~~~------~~~v~~~~~~~g~~~~i-----~~D~Vi~a~G~~p~~~~l~l~~~g 311 (491)
T 3urh_A 250 TKQGIDFKLGAKVTGAVKSGD------GAKVTFEPVKGGEATTL-----DAEVVLIATGRKPSTDGLGLAKAG 311 (491)
T ss_dssp HHTTCEEECSEEEEEEEEETT------EEEEEEEETTSCCCEEE-----EESEEEECCCCEECCTTSCHHHHT
T ss_pred HhCCCEEEECCeEEEEEEeCC------EEEEEEEecCCCceEEE-----EcCEEEEeeCCccCCCccCchhcC
Confidence 456899999999999976643 3346666533 544455 36899999997655554 56666
No 111
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=30.36 E-value=34 Score=33.41 Aligned_cols=45 Identities=16% Similarity=0.183 Sum_probs=33.5
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
.+.+++++.+ +|++|..++++ ++++|+.. +|+ ++ .++-||.|.|+
T Consensus 184 ~~~gv~~~~~-~v~~i~~~~~~----~~~~v~~~--~g~--~~-----~ad~vV~A~G~ 228 (511)
T 2weu_A 184 IARGVRHVVD-DVQHVGQDERG----WISGVHTK--QHG--EI-----SGDLFVDCTGF 228 (511)
T ss_dssp HHTTCEEEEC-CEEEEEECTTS----CEEEEEES--SSC--EE-----ECSEEEECCGG
T ss_pred HHCCCEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EE-----EcCEEEECCCc
Confidence 3468999999 99999886543 57788763 464 34 37899999996
No 112
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=29.68 E-value=52 Score=32.09 Aligned_cols=57 Identities=16% Similarity=0.228 Sum_probs=41.4
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
...+.+++|++++.|++|.-+++ ...|++. +|+ ++ .++.||+|.|..-+..+|..+|
T Consensus 235 ~l~~~GV~v~~~~~V~~i~~~~~------~~~v~l~--dG~--~i-----~aD~Vv~a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 235 KVRREGVKVMPNAIVQSVGVSSG------KLLIKLK--DGR--KV-----ETDHIVAAVGLEPNVELAKTGG 291 (493)
T ss_dssp HHHTTTCEEECSCCEEEEEEETT------EEEEEET--TSC--EE-----EESEEEECCCEEECCTTHHHHT
T ss_pred HHHhcCCEEEeCCEEEEEEecCC------eEEEEEC--CCC--EE-----ECCEEEECCCCCccHHHHHHcC
Confidence 34456899999999999876532 2356553 564 33 3689999999887777888777
No 113
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=28.94 E-value=56 Score=31.15 Aligned_cols=55 Identities=16% Similarity=0.357 Sum_probs=39.6
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
..+.++++++++.|++|. .+ +|.+.+.+|..+++ ..+.||+++|.-. |.++..||
T Consensus 210 l~~~GV~~~~~~~v~~v~--~~--------~~~~~~~~g~~~~i-----~~d~vi~~~G~~~-~~~~~~~~ 264 (430)
T 3hyw_A 210 FAERNIDWIANVAVKAIE--PD--------KVIYEDLNGNTHEV-----PAKFTMFMPSFQG-PEVVASAG 264 (430)
T ss_dssp HHHTTCEEECSCEEEEEC--SS--------EEEEECTTSCEEEE-----ECSEEEEECEEEC-CHHHHTTC
T ss_pred HHhCCeEEEeCceEEEEe--CC--------ceEEEeeCCCceEe-----ecceEEEeccCCC-chHHHhcc
Confidence 345699999999999973 22 24555556766666 4789999999655 46777776
No 114
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=28.62 E-value=55 Score=29.08 Aligned_cols=45 Identities=13% Similarity=0.085 Sum_probs=28.1
Q ss_pred eecCCCeeeeccCceEee-ccccCCCCCCChHHHHHHHHHHHHHHHHhh
Q 015588 349 VVDHDYKVLGVDALRVID-GSTFYYSPGTNPQATVMMLGRYMGVRILSE 396 (404)
Q Consensus 349 VVD~~lrV~Gv~nLrVvD-aSv~P~~~~~np~~t~~aiaer~A~~ii~~ 396 (404)
.||.+++. .++|+|++. +.-.| +........+.-|..+|..|.+.
T Consensus 270 ~vd~~~~t-~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~ 315 (323)
T 3f8d_A 270 KVDEWMRT-SVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRY 315 (323)
T ss_dssp CCCTTCBC-SSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcee-cCCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHH
Confidence 78999997 899999984 44444 22333444455566555555443
No 115
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=28.45 E-value=57 Score=31.79 Aligned_cols=55 Identities=15% Similarity=0.186 Sum_probs=38.2
Q ss_pred eEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHH--HHhhc
Q 015588 59 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 124 (404)
Q Consensus 59 l~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~L--Ll~SG 124 (404)
++|++++.|++|.-+++ .++ |++.+.+|+..++ ..+.||+|.|..-...+ |...|
T Consensus 229 V~i~~~~~v~~i~~~~~-----~v~-v~~~~~~G~~~~i-----~~D~Vi~a~G~~p~~~~l~l~~~g 285 (492)
T 3ic9_A 229 FYFDAKARVISTIEKED-----AVE-VIYFDKSGQKTTE-----SFQYVLAATGRKANVDKLGLENTS 285 (492)
T ss_dssp SEEETTCEEEEEEECSS-----SEE-EEEECTTCCEEEE-----EESEEEECSCCEESCSSSCGGGSC
T ss_pred cEEEECCEEEEEEEcCC-----EEE-EEEEeCCCceEEE-----ECCEEEEeeCCccCCCCCChhhcC
Confidence 99999999999977643 233 5555335655555 36899999998766666 44444
No 116
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=27.63 E-value=54 Score=32.10 Aligned_cols=52 Identities=13% Similarity=0.095 Sum_probs=36.7
Q ss_pred cCCCc-eecCCCeeee-----ccCceEeec---ccc-CCCCCCChHHHHHHHHHHHHHHHHh
Q 015588 344 CQVGK-VVDHDYKVLG-----VDALRVIDG---STF-YYSPGTNPQATVMMLGRYMGVRILS 395 (404)
Q Consensus 344 crMG~-VVD~~lrV~G-----v~nLrVvDa---Sv~-P~~~~~np~~t~~aiaer~A~~ii~ 395 (404)
+-||+ .+|.++||.+ ++|||.+.- +++ ..-+++|..+..+..+.++++++.+
T Consensus 447 ~t~GGl~~d~~~~Vl~~~g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 447 FTLGGLRTTVNSEVLHVSGEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp EECCEECBCTTCEEEBTTSSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred ccCcCeeECCCCceECCCCCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 34665 5777777754 789999863 566 3345788888888889887776643
No 117
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=27.45 E-value=18 Score=36.12 Aligned_cols=57 Identities=18% Similarity=0.298 Sum_probs=38.6
Q ss_pred CCCCe--EEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 55 NPSGL--TLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 55 ~r~nl--~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+-++ ++..++.|+++.+++.. ....|+. .+|+. + .++.||+|.|....|++.-..|
T Consensus 110 ~~~g~~~~i~~~~~V~~i~~~~~~----~~w~V~~--~~G~~--i-----~ad~lV~AtG~~s~p~~p~ipG 168 (549)
T 4ap3_A 110 DRFDLRRDIRFDTRVTSAVLDEEG----LRWTVRT--DRGDE--V-----SARFLVVAAGPLSNANTPAFDG 168 (549)
T ss_dssp HHTTCGGGEECSCCEEEEEEETTT----TEEEEEE--TTCCE--E-----EEEEEEECCCSEEECCCCCCTT
T ss_pred HHcCCCccEEECCEEEEEEEcCCC----CEEEEEE--CCCCE--E-----EeCEEEECcCCCCCCCCCCCCC
Confidence 33455 78899999999998653 2333443 35653 3 3689999999887777655444
No 118
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=27.40 E-value=16 Score=35.68 Aligned_cols=52 Identities=10% Similarity=0.074 Sum_probs=32.6
Q ss_pred eEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCce-eEEEeecCCCceEEEecCCcC
Q 015588 59 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAK-HRAYLKNGPKNEIIVSAGALG 115 (404)
Q Consensus 59 l~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~-~~v~~~~~a~keVILsAGai~ 115 (404)
.+|.+++.|++|..++++......+.|.+.+.+|+. .++ .++.||+++..-.
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~-----~ad~VI~a~p~~~ 308 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEE-----SFDAVIMTAPLCD 308 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCC-----EESEEEECSCHHH
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeE-----ECCEEEECCCHHH
Confidence 579999999999987652000013677775434532 233 3688999988533
No 119
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=27.33 E-value=57 Score=31.04 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=30.7
Q ss_pred eEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHH
Q 015588 59 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 119 (404)
Q Consensus 59 l~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~L 119 (404)
.+|.+++.|++|..+++ . ..|+. .+|+. + .++.||+|+.+-...+|
T Consensus 248 ~~i~~~~~V~~i~~~~~-----~-~~v~~--~~g~~--~-----~ad~vi~a~p~~~~~~l 293 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS-----C-YSLEL--DNGVT--L-----DADSVIVTAPHKAAAGM 293 (470)
T ss_dssp EEEECSCCEEEEEECSS-----S-EEEEE--SSSCE--E-----EESEEEECSCHHHHHHH
T ss_pred CEEEeCCceEEEEEcCC-----e-EEEEE--CCCCE--E-----ECCEEEECCCHHHHHHH
Confidence 68999999999987654 2 22443 45653 3 35899999986443333
No 120
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=25.97 E-value=74 Score=32.26 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=38.1
Q ss_pred CCCc-eecCCCeeee--------ccCceEeec----cccC-CCCCCChHHHHHHHHHHHHHHHHh
Q 015588 345 QVGK-VVDHDYKVLG--------VDALRVIDG----STFY-YSPGTNPQATVMMLGRYMGVRILS 395 (404)
Q Consensus 345 rMG~-VVD~~lrV~G--------v~nLrVvDa----Sv~P-~~~~~np~~t~~aiaer~A~~ii~ 395 (404)
-||+ .||.++||.. ++|||.+.- |+.- .-+++|..+-.+..+.++++++.+
T Consensus 366 tmGGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~ 430 (621)
T 2h88_A 366 NMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAE 430 (621)
T ss_dssp ESCBEEBCTTSEEEEEETTEEEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHH
T ss_pred ccCcEeECCCCeEeecccCCCcccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 4776 5999999964 899999864 3432 224788888888889887777654
No 121
>2vqe_L 30S ribosomal protein S12, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1gix_O* 1hnw_L* 1hnx_L* 1hnz_L* 1hr0_L 1ibk_L* 1ibl_L* 1ibm_L 1j5e_L 1jgo_O* 1jgp_O* 1jgq_O* 1mj1_O* 1ml5_O* 1mvr_O 1n32_L* 1n33_L* 1n34_L 1n36_L 1xmo_L* ...
Probab=25.97 E-value=32 Score=27.15 Aligned_cols=23 Identities=17% Similarity=0.183 Sum_probs=18.1
Q ss_pred ceeeecCcccCCcCcCCCCceee
Q 015588 128 ITVVLDQPLVGQGMSDNPMNAIF 150 (404)
Q Consensus 128 I~~~~d~p~VG~nl~DH~~~~~~ 150 (404)
..+..=.|+.|.|||+|..+.+.
T Consensus 64 k~VtAyIPG~GhnlqEhs~VLVr 86 (135)
T 2vqe_L 64 YEVTAYIPGEGHNLQEHSVVLIR 86 (135)
T ss_dssp CEEEEECCSSCCCCCTTCEEEEE
T ss_pred CEEEEEcCCCCCccCcCCEEEEc
Confidence 55566679999999999876554
No 122
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=25.60 E-value=1.3e+02 Score=28.34 Aligned_cols=57 Identities=12% Similarity=0.216 Sum_probs=36.6
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHh-hc
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML-SG 124 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~-SG 124 (404)
.+.+.++++++++.|++|. .+ +|.+.+.+++..++ ..+.||++.|....+.+-.. +|
T Consensus 209 ~l~~~GV~i~~~~~v~~v~--~~--------~v~~~~~~~~g~~i-----~~D~vv~a~G~~~~~~l~~~~~g 266 (430)
T 3h28_A 209 LFAERNIDWIANVAVKAIE--PD--------KVIYEDLNGNTHEV-----PAKFTMFMPSFQGPEVVASAGDK 266 (430)
T ss_dssp HHHHTTCEEECSCEEEEEC--SS--------EEEEECTTSCEEEE-----ECSEEEEECEEECCHHHHTTCTT
T ss_pred HHHHCCCEEEeCCEEEEEe--CC--------eEEEEecCCCceEE-----eeeEEEECCCCccchhHhhcccc
Confidence 4455699999999999983 21 24555433444455 46899999997655543333 44
No 123
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=25.37 E-value=71 Score=34.31 Aligned_cols=59 Identities=15% Similarity=0.166 Sum_probs=42.3
Q ss_pred CCeEEecCcEEEEEEEecCCCCCCeEEEEEEEe--C---CCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 57 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD--A---TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 57 ~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~--~---~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
.+++|++++.|++|.-++++ ++++|++.+ . +|+..++ ..+.||+|.|..-+..+|...|
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~----~v~~v~~~~~~~~~~~G~~~~i-----~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENG----ELSAIVVAELDEARELGGTQRF-----EADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp TTCCEEETEEEEEEEECTTS----CEEEEEEEEECTTCCEEEEEEE-----ECSEEEEECCEEECCHHHHHTT
T ss_pred CCeEEEeCCEeEEEeccCCC----CEEEEEEEeccccCCCCceEEE-----EcCEEEECCCcCcChHHHHhCC
Confidence 47889999999998753122 588999875 2 2433455 4689999999877777776654
No 124
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=25.06 E-value=66 Score=31.13 Aligned_cols=57 Identities=16% Similarity=0.198 Sum_probs=39.9
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCC-CceeEEEeecCCCceEEEecCCcCchHHH
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLL 120 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~-g~~~~v~~~~~a~keVILsAGai~TP~LL 120 (404)
+.+.+++|++++.|++|.-++++ ...|++.+.. |+..++ ..+.||+|.|..-...+|
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~~-----~~~v~~~~~~~~~~~~~-----~~D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 237 MEERGIPFLRKTVPLSVEKQDDG-----KLLVKYKNVETGEESED-----VYDTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHTTCCEEETEEEEEEEECTTS-----CEEEEEEETTTCCEEEE-----EESEEEECSCEEECCGGG
T ss_pred HHhCCCEEEeCCEEEEEEEcCCC-----cEEEEEecCCCCceeEE-----EcCEEEECcccccCcCcC
Confidence 34568999999999999765432 2357776632 444455 368999999976665665
No 125
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=25.01 E-value=75 Score=32.18 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=37.0
Q ss_pred CeEEecCcEEEEEEEecCCCCCCeEEEEEEEe----CCCceeEEEeecCCCceEEEecCCcCchH
Q 015588 58 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRD----ATGAKHRAYLKNGPKNEIIVSAGALGSPQ 118 (404)
Q Consensus 58 nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~----~~g~~~~v~~~~~a~keVILsAGai~TP~ 118 (404)
|++|..+++|+.|..++++ ....+.|++.+ .+|+..++ .++-||.|.|+-.+-+
T Consensus 157 ~v~v~~~~~v~~l~~~~~~--~~~~v~v~~~~~~~~~~G~~~~i-----~a~~vVgADG~~S~vR 214 (639)
T 2dkh_A 157 RLEPHYARRVLDVKVDHGA--ADYPVTVTLERCDAAHAGQIETV-----QARYVVGCDGARSNVR 214 (639)
T ss_dssp CCCCBCSEEEEEEEECTTC--SSCCEEEEEEECSGGGTTCEEEE-----EEEEEEECCCTTCHHH
T ss_pred CcEEecCCEEEEEEECCCC--CcCCEEEEEEeccccCCCCeEEE-----EeCEEEECCCcchHHH
Confidence 6799999999999987531 01234566664 25655566 3789999999854433
No 126
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=24.79 E-value=53 Score=32.36 Aligned_cols=44 Identities=16% Similarity=0.280 Sum_probs=32.8
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
+.+++++.+ +|+.|..++++ .+++|... +|+ ++ .++-||+|.|+
T Consensus 177 ~~gv~~~~~-~v~~i~~~~~g----~~~~v~~~--~g~--~i-----~ad~vV~A~G~ 220 (538)
T 2aqj_A 177 ERGVNRVVD-EVVDVRLNNRG----YISNLLTK--EGR--TL-----EADLFIDCSGM 220 (538)
T ss_dssp HTTCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EE-----CCSEEEECCGG
T ss_pred HCCCEEEEe-eEeEEEEcCCC----cEEEEEEC--CCc--EE-----EeCEEEECCCC
Confidence 468999999 89999886543 46777763 453 34 47999999996
No 127
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=24.29 E-value=70 Score=31.80 Aligned_cols=51 Identities=20% Similarity=0.317 Sum_probs=37.1
Q ss_pred CCCc-eecCCCeee-----eccCceEee---ccccC-CCCCCChHHHHHHHHHHHHHHHHh
Q 015588 345 QVGK-VVDHDYKVL-----GVDALRVID---GSTFY-YSPGTNPQATVMMLGRYMGVRILS 395 (404)
Q Consensus 345 rMG~-VVD~~lrV~-----Gv~nLrVvD---aSv~P-~~~~~np~~t~~aiaer~A~~ii~ 395 (404)
-||+ .||.++||. -++|||.+. ++++- .-+++|..+..+..+.++++.+.+
T Consensus 506 t~GGl~id~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~ 566 (571)
T 1y0p_A 506 TMGGVMIDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAK 566 (571)
T ss_dssp ECCEEEBCTTCEEECTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCeEECCCceEECCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 3776 489999984 489999986 34543 235678888888889887776644
No 128
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=24.11 E-value=92 Score=29.94 Aligned_cols=53 Identities=28% Similarity=0.330 Sum_probs=36.0
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHH
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 119 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~L 119 (404)
.+.++++++++.|++|.-+++ -..|.+.+.+| ..++ ..+.||+|.|..-....
T Consensus 232 ~~~Gv~v~~~~~v~~i~~~~~------~~~v~~~~~~g-~~~~-----~~D~vi~a~G~~p~~~~ 284 (476)
T 3lad_A 232 TKQGLKILLGARVTGTEVKNK------QVTVKFVDAEG-EKSQ-----AFDKLIVAVGRRPVTTD 284 (476)
T ss_dssp HHTTEEEEETCEEEEEEECSS------CEEEEEESSSE-EEEE-----EESEEEECSCEEECCTT
T ss_pred HhCCCEEEECCEEEEEEEcCC------EEEEEEEeCCC-cEEE-----ECCEEEEeeCCcccCCC
Confidence 456899999999999976543 23366665334 3344 36899999997544443
No 129
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=24.10 E-value=32 Score=33.10 Aligned_cols=49 Identities=14% Similarity=0.157 Sum_probs=32.8
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHH
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 119 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~L 119 (404)
+.+.+|.+++.|++|..+++ ....|.. ++. ++ .++.||+|+++-...+|
T Consensus 246 ~~g~~i~~~~~V~~i~~~~~-----~~~~v~~---~~~--~~-----~ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 246 SRGVSVLRGQPVCGLSLQAE-----GRWKVSL---RDS--SL-----EADHVISAIPASVLSEL 294 (477)
T ss_dssp HTTCEEECSCCCCEEEECGG-----GCEEEEC---SSC--EE-----EESEEEECSCHHHHHHH
T ss_pred hcCCEEEeCCEEEEEEEcCC-----ceEEEEE---CCe--EE-----EcCEEEECCCHHHHHHh
Confidence 34789999999999988654 2344532 343 23 36899999986444444
No 130
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=24.02 E-value=86 Score=29.44 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=28.8
Q ss_pred CCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCC
Q 015588 55 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 55 ~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGa 113 (404)
.+.+ +|++++.|++|..+++ .++ |++ .+|+. + .++.||+|+|.
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~-----~v~-v~~--~~g~~--~-----~ad~vi~a~~~ 257 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGD-----VVN-VTV--KDGHA--F-----QAHSVIVATPM 257 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSS-----SEE-EEE--TTSCC--E-----EEEEEEECSCG
T ss_pred hhCC-ceEeCCEEEEEEEcCC-----eEE-EEE--CCCCE--E-----EeCEEEEecCc
Confidence 3334 8999999999986643 232 443 35643 3 36899999984
No 131
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=23.99 E-value=44 Score=32.12 Aligned_cols=49 Identities=14% Similarity=0.130 Sum_probs=31.2
Q ss_pred eEEecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCchHHH
Q 015588 59 LTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 120 (404)
Q Consensus 59 l~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP~LL 120 (404)
.+|++++.|++|..+++ + ++|.+.+ .+|+ ++ .++.||+|+++-...+||
T Consensus 250 ~~i~~~~~V~~i~~~~~-----~-~~v~~~~~~~g~--~~-----~ad~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 250 DAAHVGARVEGLAREDG-----G-WRLIIEEHGRRA--EL-----SVAQVVLAAPAHATAKLL 299 (478)
T ss_dssp GGEESSEEEEEEECC-------C-CEEEEEETTEEE--EE-----ECSEEEECSCHHHHHHHH
T ss_pred hhEEcCCEEEEEEecCC-----e-EEEEEeecCCCc--eE-----EcCEEEECCCHHHHHHHh
Confidence 47999999999987643 2 4565532 2343 33 368999999865444444
No 132
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=23.96 E-value=1.2e+02 Score=28.97 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=28.4
Q ss_pred eEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecC
Q 015588 59 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAG 112 (404)
Q Consensus 59 l~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAG 112 (404)
-+|++++.|++|..+++ +++ |.+.+ .++..++ .++.||+++.
T Consensus 252 ~~i~~~~~V~~i~~~~~-----~v~-v~~~~-g~~~~~~-----~ad~vI~a~p 293 (489)
T 2jae_A 252 DNIVFGAEVTSMKNVSE-----GVT-VEYTA-GGSKKSI-----TADYAICTIP 293 (489)
T ss_dssp GGEETTCEEEEEEEETT-----EEE-EEEEE-TTEEEEE-----EESEEEECSC
T ss_pred CeEEECCEEEEEEEcCC-----eEE-EEEec-CCeEEEE-----ECCEEEECCC
Confidence 46999999999988754 343 55543 2222344 3689999986
No 133
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=23.61 E-value=1.4e+02 Score=29.40 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=32.9
Q ss_pred EecCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeecCCCceEEEecCCcCch
Q 015588 61 LLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSP 117 (404)
Q Consensus 61 v~~~a~V~rv~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~a~keVILsAGai~TP 117 (404)
|..++.|+.|..+++ .++ |++.+ .+|+..++ .++-||.|.|+-.+-
T Consensus 152 v~~~~~v~~~~~~~~-----~v~-v~~~~~~~G~~~~i-----~a~~vVgADG~~S~v 198 (549)
T 2r0c_A 152 LRTRSRLDSFEQRDD-----HVR-ATITDLRTGATRAV-----HARYLVACDGASSPT 198 (549)
T ss_dssp EECSEEEEEEEECSS-----CEE-EEEEETTTCCEEEE-----EEEEEEECCCTTCHH
T ss_pred cccCcEEEEEEEeCC-----EEE-EEEEECCCCCEEEE-----EeCEEEECCCCCcHH
Confidence 999999999988764 244 66665 23655556 378999999985443
No 134
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=23.06 E-value=1e+02 Score=29.53 Aligned_cols=59 Identities=12% Similarity=0.137 Sum_probs=39.7
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCC--CceeEEEeecCCCceEEEecCCcCchHH--HHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT--GAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~--g~~~~v~~~~~a~keVILsAGai~TP~L--Ll~SG 124 (404)
+.+.++++++++.|++|.-+++ ...|++.+ + |+..++ ..+.||+|.|..-...+ |..+|
T Consensus 220 l~~~gV~i~~~~~v~~i~~~~~------~~~v~~~~-~~~g~~~~i-----~~D~vv~a~G~~p~~~~l~l~~~g 282 (464)
T 2eq6_A 220 LEKEGIRVRTKTKAVGYEKKKD------GLHVRLEP-AEGGEGEEV-----VVDKVLVAVGRKPRTEGLGLEKAG 282 (464)
T ss_dssp HHHTTCEEECSEEEEEEEEETT------EEEEEEEE-TTCCSCEEE-----EESEEEECSCEEESCTTSSHHHHT
T ss_pred HHhcCCEEEcCCEEEEEEEeCC------EEEEEEee-cCCCceeEE-----EcCEEEECCCcccCCCCCChhhcC
Confidence 3456899999999999976542 23466652 3 654455 36899999997655554 44555
No 135
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=22.61 E-value=66 Score=32.15 Aligned_cols=48 Identities=10% Similarity=0.082 Sum_probs=33.7
Q ss_pred CCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcC
Q 015588 56 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 115 (404)
Q Consensus 56 r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~ 115 (404)
+.+++|+.++.|+.|..++++ ++ |++.+.+|+ .++ .++-||.|.|+-.
T Consensus 160 ~~gv~i~~~~~v~~l~~~~~~-----v~-v~~~~~~G~-~~~-----~a~~vV~ADG~~S 207 (570)
T 3fmw_A 160 EAGAEIPRGHEVTRLRQDAEA-----VE-VTVAGPSGP-YPV-----RARYGVGCDGGRS 207 (570)
T ss_dssp HHTEECCBSCEEEECCBCSSC-----EE-EEEEETTEE-EEE-----EESEEEECSCSSC
T ss_pred hCCCEEEeCCEEEEEEEcCCe-----EE-EEEEeCCCc-EEE-----EeCEEEEcCCCCc
Confidence 358999999999999876542 33 666544553 344 3689999999743
No 136
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=22.52 E-value=71 Score=29.18 Aligned_cols=52 Identities=19% Similarity=0.176 Sum_probs=0.0
Q ss_pred hhh-hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCch
Q 015588 50 LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 117 (404)
Q Consensus 50 ~l~-~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP 117 (404)
|+. .+.+.+++++.++.|++|..+++. +.+...+| ++ ..+.||||+|+...|
T Consensus 93 ~l~~~~~~~gv~i~~~~~v~~i~~~~~~--------~~v~~~~g---~~-----~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 93 YLQVVANHYELNIFENTVVTNISADDAY--------YTIATTTE---TY-----HADYIFVATGDYNFP 145 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECSSS--------EEEEESSC---CE-----EEEEEEECCCSTTSB
T ss_pred HHHHHHHHcCCeEEeCCEEEEEEECCCe--------EEEEeCCC---EE-----EeCEEEECCCCCCcc
No 137
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=22.30 E-value=84 Score=32.10 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=35.5
Q ss_pred CCCc-eecCCCeeeeccCceEeecc----ccC-CCCCCChHHHHHHHHHHHHHHHH
Q 015588 345 QVGK-VVDHDYKVLGVDALRVIDGS----TFY-YSPGTNPQATVMMLGRYMGVRIL 394 (404)
Q Consensus 345 rMG~-VVD~~lrV~Gv~nLrVvDaS----v~P-~~~~~np~~t~~aiaer~A~~ii 394 (404)
.||+ .||.+++| -++|||.+.-. +.- .-.++|..+-.+..+.++++.+.
T Consensus 371 t~GGi~vd~~~~v-~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa 425 (660)
T 2bs2_A 371 SMGGIRTDYRGEA-KLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFA 425 (660)
T ss_dssp ECCEEECCTTSBC-SSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEECCCCce-ecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 4676 59999999 89999999752 222 22457777777788877776654
No 138
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=22.00 E-value=34 Score=32.92 Aligned_cols=45 Identities=9% Similarity=0.031 Sum_probs=31.0
Q ss_pred eEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHH
Q 015588 59 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 119 (404)
Q Consensus 59 l~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~L 119 (404)
.+|.+++.|++|..+++ . |.+...+| ++ .++.||+|+++-...+|
T Consensus 249 ~~i~~~~~V~~i~~~~~-----~---~~v~~~~g---~~-----~ad~vV~a~p~~~~~~l 293 (475)
T 3lov_A 249 SEIRLETPLLAISREDG-----R---YRLKTDHG---PE-----YADYVLLTIPHPQVVQL 293 (475)
T ss_dssp CEEESSCCCCEEEEETT-----E---EEEECTTC---CE-----EESEEEECSCHHHHHHH
T ss_pred CEEEcCCeeeEEEEeCC-----E---EEEEECCC---eE-----ECCEEEECCCHHHHHHH
Confidence 68999999999987653 2 34443456 23 36899999987544444
No 139
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=21.95 E-value=43 Score=32.49 Aligned_cols=59 Identities=12% Similarity=0.067 Sum_probs=38.9
Q ss_pred cCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHH-HHhhc
Q 015588 54 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL-LMLSG 124 (404)
Q Consensus 54 ~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~L-Ll~SG 124 (404)
+.+.+++|++++.|++|.-++++ +...|++. +|+ .++ ..+.||+|.|..-+..| |..+|
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~~~~----~~~~v~~~--~G~-~~i-----~~D~vv~a~G~~p~~~l~l~~~g 295 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKNVET----DKLKIHMN--DSK-SID-----DVDELIWTIGRKSHLGMGSENVG 295 (479)
T ss_dssp HHHHTCEEECSCCEEEEEECC-C----CCEEEEET--TSC-EEE-----EESEEEECSCEEECCCSSGGGGT
T ss_pred HHhCCeEEEeCCEEEEEEEcCCC----cEEEEEEC--CCc-EEE-----EcCEEEECCCCCCccccChhhcC
Confidence 34468999999999999754321 24556653 563 334 36899999997555555 55555
No 140
>3c66_C PRE-mRNA polyadenylation factor FIP1; peptide-protein complex, mRNA processing, nucleus, RNA-bindi transferase, phosphoprotein; HET: MES; 2.60A {Saccharomyces cerevisiae}
Probab=21.86 E-value=13 Score=20.36 Aligned_cols=8 Identities=50% Similarity=0.904 Sum_probs=6.4
Q ss_pred eEEEecCC
Q 015588 106 EIIVSAGA 113 (404)
Q Consensus 106 eVILsAGa 113 (404)
|||++.|+
T Consensus 3 EfIIs~G~ 10 (26)
T 3c66_C 3 EVIISLGP 10 (26)
T ss_dssp CEESCSSS
T ss_pred EEEEecCC
Confidence 78888887
No 141
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=21.78 E-value=86 Score=31.13 Aligned_cols=51 Identities=22% Similarity=0.285 Sum_probs=36.4
Q ss_pred CCCc-eecCCCeee-----eccCceEeec---cccC-CCCCCChHHHHHHHHHHHHHHHHh
Q 015588 345 QVGK-VVDHDYKVL-----GVDALRVIDG---STFY-YSPGTNPQATVMMLGRYMGVRILS 395 (404)
Q Consensus 345 rMG~-VVD~~lrV~-----Gv~nLrVvDa---Sv~P-~~~~~np~~t~~aiaer~A~~ii~ 395 (404)
-||+ .||.++||. -++|||.+.- +++- .-+++|..+-.+..+.++++.+.+
T Consensus 501 t~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~ 561 (566)
T 1qo8_A 501 TMGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAK 561 (566)
T ss_dssp ECCEECBCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ecccEEECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Confidence 4776 489999985 5899999864 4442 234677778888888887776644
No 142
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=21.39 E-value=60 Score=31.30 Aligned_cols=56 Identities=18% Similarity=0.196 Sum_probs=37.2
Q ss_pred eEEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHH-HHhhc
Q 015588 59 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL-LMLSG 124 (404)
Q Consensus 59 l~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~L-Ll~SG 124 (404)
++|++++.|++|.-++.+ .++ |++.+.+|+..++ ..+.||+|.|..-...| |..+|
T Consensus 226 v~i~~~~~v~~i~~~~~~----~v~-v~~~~~~G~~~~i-----~~D~vi~a~G~~p~~~l~l~~~g 282 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDD----EYE-VIYSTKDGSKKSI-----FTNSVVLAAGRRPVIPEGAREIG 282 (466)
T ss_dssp CCEECSCCEEEEEEEETT----EEE-EEECCTTSCCEEE-----EESCEEECCCEEECCCTTTGGGT
T ss_pred EEEEECCEEEEEEEcCCC----cEE-EEEEecCCceEEE-----EcCEEEECcCCCcccccchhhcC
Confidence 899999999999775511 232 5554224655555 36899999997655554 55555
No 143
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=21.22 E-value=78 Score=30.92 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=36.3
Q ss_pred hhh-hcCCCCeEEecCcEEEEEEEecCCCC--CCeEEEEEEEeC-CCceeEEEeecCCCceEEEecCC
Q 015588 50 LLE-YANPSGLTLLLHASVHKVLFRIKGKA--RPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGA 113 (404)
Q Consensus 50 ~l~-~~~r~nl~v~~~a~V~rv~~~~~~~~--~~~a~GV~~~~~-~g~~~~v~~~~~a~keVILsAGa 113 (404)
||. .+++=+..|..+++|++|..+..... .....-|+..+. .|+..++ .++.||||.|.
T Consensus 150 Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~-----~ar~vVlatG~ 212 (501)
T 4b63_A 150 YMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISAR-----RTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEE-----EEEEEEECCCC
T ss_pred HHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEE-----EeCEEEECcCC
Confidence 454 33333467899999999998654211 112344555553 3555554 37899999993
No 144
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=20.42 E-value=92 Score=31.01 Aligned_cols=51 Identities=20% Similarity=0.272 Sum_probs=37.2
Q ss_pred CCCc-eecCCCeee------eccCceEeec---cccC-CCCCCChHHHHHHHHHHHHHHHHh
Q 015588 345 QVGK-VVDHDYKVL------GVDALRVIDG---STFY-YSPGTNPQATVMMLGRYMGVRILS 395 (404)
Q Consensus 345 rMG~-VVD~~lrV~------Gv~nLrVvDa---Sv~P-~~~~~np~~t~~aiaer~A~~ii~ 395 (404)
-||+ .||.++||. -++|||.+.- +++- .-+++|..+..+..+.++++.+.+
T Consensus 506 t~GGl~id~~~~Vl~~~g~~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~ 567 (572)
T 1d4d_A 506 TMGGLVIDTKAEVKSEKTAKPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAK 567 (572)
T ss_dssp ECCEEEBCTTCEEEBSSSSSEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCeEECCCCeEEcCCCCcccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 4776 489999985 4788999864 4442 234688888888889888777654
No 145
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=20.34 E-value=75 Score=31.54 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=34.3
Q ss_pred EEecCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeecCCCceEEEecCCcCchHHHHhhc
Q 015588 60 TLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 124 (404)
Q Consensus 60 ~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~a~keVILsAGai~TP~LLl~SG 124 (404)
+|..++.|+++.++... ...-|+. .+|+ ++ .++.||+|.|....|++.-.-|
T Consensus 105 ~i~~~~~V~~~~~~~~~----~~w~V~~--~~G~--~~-----~ad~lV~AtG~~s~p~~p~ipG 156 (545)
T 3uox_A 105 HYRFNTRVTAARYVEND----RLWEVTL--DNEE--VV-----TCRFLISATGPLSASRMPDIKG 156 (545)
T ss_dssp GEECSCCEEEEEEEGGG----TEEEEEE--TTTE--EE-----EEEEEEECCCSCBC---CCCTT
T ss_pred cEEECCEEEEEEEeCCC----CEEEEEE--CCCC--EE-----EeCEEEECcCCCCCCcCCCCCC
Confidence 68889999999998642 2333443 3564 33 3689999999988888765554
No 146
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=20.09 E-value=1e+02 Score=29.73 Aligned_cols=62 Identities=13% Similarity=0.170 Sum_probs=41.0
Q ss_pred hcCCCCeEEecCcEEEEEEEecCCCCCCeEEEEEEEeCC-CceeEEEeecCCCceEEEecCCcCchHH--HHhhc
Q 015588 53 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 124 (404)
Q Consensus 53 ~~~r~nl~v~~~a~V~rv~~~~~~~~~~~a~GV~~~~~~-g~~~~v~~~~~a~keVILsAGai~TP~L--Ll~SG 124 (404)
.+.+.++++++++.|++|.-.+++ ...|++.+.+ |+..++ ..+.||+|.|..-...+ |..+|
T Consensus 234 ~l~~~gv~~~~~~~v~~i~~~~~~-----~~~v~~~~~~~g~~~~~-----~~D~vi~a~G~~p~~~~l~l~~~g 298 (488)
T 3dgz_A 234 HMESHGTQFLKGCVPSHIKKLPTN-----QLQVTWEDHASGKEDTG-----TFDTVLWAIGRVPETRTLNLEKAG 298 (488)
T ss_dssp HHHHTTCEEEETEEEEEEEECTTS-----CEEEEEEETTTTEEEEE-----EESEEEECSCEEESCGGGTGGGGT
T ss_pred HHHHCCCEEEeCCEEEEEEEcCCC-----cEEEEEEeCCCCeeEEE-----ECCEEEEcccCCcccCcCCccccC
Confidence 334568999999999999764332 3446666533 544445 36899999997666565 34444
Done!